HHsearch alignment for GI: 254780163 and conserved domain: PRK08853

>PRK08853 DNA polymerase III subunits gamma and tau; Validated.
Probab=99.14  E-value=1.3e-09  Score=88.32  Aligned_cols=198  Identities=18%  Similarity=0.212  Sum_probs=132.7

Q ss_pred             HHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEE-CCCCCHHHHHHHHHHHHHHCCC---------CCHH-----HHEE
Q ss_conf             77548611222178999999998622677874896-6764116689999999985489---------8834-----5201
Q gi|254780163|r  197 KVKKGKVDILVGRHEEINRTIQILCRRSKNNPLYV-GDPGVGKTAIAEGFAKQIVDGM---------VPDI-----LLGA  261 (798)
Q Consensus       197 ~AreGKLDPVIGRd~EI~riiqIL~RR~KNn~~lv-G~~gvGktaive~la~~i~~~~---------vp~~-----l~~~  261 (798)
T Consensus         9 k~RP~~f~e~vGQ~~v~~~L~nal~~~rl~haylf~G~rGvGKTt~ARi~Ak~lNC~~~~~~~pcg~C~~C~~i~~g~~~   88 (717)
T PRK08853          9 KWRPTQFKEVVGQSHVLTALENALAHNRLHHAYLFSGTRGVGKTTIGRLFAKGLNCETGITSTPCGQCATCKEIDEGRFV   88 (717)
T ss_pred             HHCCCCHHHHCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCCCC
T ss_conf             51798565513859999999999970997405761088988898999999998678999999978887026767447877


Q ss_pred             EEEEEEHHHHHCCCCCCCHHHHHHHHHHHHHCC---CCC-EEEEECCHHHHHCCCCCCCCCCCHHHHHHHHHCC--CCEE
Q ss_conf             445540467530634312378999999987203---898-3999736166301554443447778888766302--6603
Q gi|254780163|r  262 RIFSLDMGNLIAGTRYRGDFEERIKKIVKEIES---YAN-AILYIDEIHTLVGAGSASGISVDASNLLKPALSS--GAVR  335 (798)
Q Consensus       262 ~i~~ld~~~l~ag~~~rg~fe~r~~~~~~~~~~---~~~-~ilfideih~ligag~~~g~~~d~an~lkP~L~r--g~~~  335 (798)
T Consensus        89 d~~EiDaA------s~~~v--dd~rel~~~~~y~p~~~~yKvyiiDEvHml---------s~~afnAlLKtlEEPP~hv~  151 (717)
T PRK08853         89 DLLEIDAA------SRTKV--EDTRELLDNVQYKPARGRFKVYLIDEVHML---------SRHSFNALLKTLEEPPEYVK  151 (717)
T ss_pred             CEEEECCC------CCCCH--HHHHHHHHHCCCCCCCCCEEEEEEECHHHC---------CHHHHHHHHHHHCCCCCCEE
T ss_conf             52454056------56788--999999985554887785479998305443---------89999999876037875648


Q ss_pred             EEEECCHHHHHHHHHCCHHHHHHCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCEECCHHHHHHHHHHHHHCCCCCCHHH
Q ss_conf             88730489999985201114320014430687868999999861276654103512111789999986542015556467
Q gi|254780163|r  336 CIGSTTYSEYRQFFEKDKALVRRFQKIDVSEPSIEDAIEIVKGIKPYFEEHHQLRYSKEAIRAAVQLSVRHFTSRKLPDK  415 (798)
Q Consensus       336 ~IgatT~~ey~~~~e~d~al~rrF~~i~v~ep~~~~~~~iL~~~~~~ye~~h~v~~~~~al~~av~ls~ryi~~r~lPdk  415 (798)
T Consensus       152 FilaTT~~--~kip--~-TilSRc~~f~l~~~~~~~i~~~l~~i~~~----E~i~~~~~al~~ia~~a~Gs~Rd------  216 (717)
T PRK08853        152 FLLATTDP--QKLP--V-TILSRCLQFHLKPISVDQIHQQLDFVLDK----EQVSAEARALGLIAHAADGSMRD------  216 (717)
T ss_pred             EEEECCCH--HHCC--H-HHHHHHHHCCCCCCCHHHHHHHHHHHHHH----CCCCCCHHHHHHHHHHCCCCHHH------
T ss_conf             99843873--4373--8-89876544232689999999999999997----59876999999999976883778------


Q ss_pred             HHHHHHHHHHH
Q ss_conf             98899865333
Q gi|254780163|r  416 AIDVIDEAGAS  426 (798)
Q Consensus       416 AidllDea~a~  426 (798)
T Consensus       217 alsl~dqaia~  227 (717)
T PRK08853        217 ALSLTDQAIAL  227 (717)
T ss_pred             HHHHHHHHHHH
T ss_conf             88899999996