HHsearch alignment for GI: 254780163 and conserved domain: PRK08853
>PRK08853 DNA polymerase III subunits gamma and tau; Validated.
Probab=99.14 E-value=1.3e-09 Score=88.32 Aligned_cols=198 Identities=18% Similarity=0.212 Sum_probs=132.7
Q ss_pred HHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEE-CCCCCHHHHHHHHHHHHHHCCC---------CCHH-----HHEE
Q ss_conf 77548611222178999999998622677874896-6764116689999999985489---------8834-----5201
Q gi|254780163|r 197 KVKKGKVDILVGRHEEINRTIQILCRRSKNNPLYV-GDPGVGKTAIAEGFAKQIVDGM---------VPDI-----LLGA 261 (798)
Q Consensus 197 ~AreGKLDPVIGRd~EI~riiqIL~RR~KNn~~lv-G~~gvGktaive~la~~i~~~~---------vp~~-----l~~~ 261 (798)
T Consensus 9 k~RP~~f~e~vGQ~~v~~~L~nal~~~rl~haylf~G~rGvGKTt~ARi~Ak~lNC~~~~~~~pcg~C~~C~~i~~g~~~ 88 (717)
T PRK08853 9 KWRPTQFKEVVGQSHVLTALENALAHNRLHHAYLFSGTRGVGKTTIGRLFAKGLNCETGITSTPCGQCATCKEIDEGRFV 88 (717)
T ss_pred HHCCCCHHHHCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCCCC
T ss_conf 51798565513859999999999970997405761088988898999999998678999999978887026767447877
Q ss_pred EEEEEEHHHHHCCCCCCCHHHHHHHHHHHHHCC---CCC-EEEEECCHHHHHCCCCCCCCCCCHHHHHHHHHCC--CCEE
Q ss_conf 445540467530634312378999999987203---898-3999736166301554443447778888766302--6603
Q gi|254780163|r 262 RIFSLDMGNLIAGTRYRGDFEERIKKIVKEIES---YAN-AILYIDEIHTLVGAGSASGISVDASNLLKPALSS--GAVR 335 (798)
Q Consensus 262 ~i~~ld~~~l~ag~~~rg~fe~r~~~~~~~~~~---~~~-~ilfideih~ligag~~~g~~~d~an~lkP~L~r--g~~~ 335 (798)
T Consensus 89 d~~EiDaA------s~~~v--dd~rel~~~~~y~p~~~~yKvyiiDEvHml---------s~~afnAlLKtlEEPP~hv~ 151 (717)
T PRK08853 89 DLLEIDAA------SRTKV--EDTRELLDNVQYKPARGRFKVYLIDEVHML---------SRHSFNALLKTLEEPPEYVK 151 (717)
T ss_pred CEEEECCC------CCCCH--HHHHHHHHHCCCCCCCCCEEEEEEECHHHC---------CHHHHHHHHHHHCCCCCCEE
T ss_conf 52454056------56788--999999985554887785479998305443---------89999999876037875648
Q ss_pred EEEECCHHHHHHHHHCCHHHHHHCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCEECCHHHHHHHHHHHHHCCCCCCHHH
Q ss_conf 88730489999985201114320014430687868999999861276654103512111789999986542015556467
Q gi|254780163|r 336 CIGSTTYSEYRQFFEKDKALVRRFQKIDVSEPSIEDAIEIVKGIKPYFEEHHQLRYSKEAIRAAVQLSVRHFTSRKLPDK 415 (798)
Q Consensus 336 ~IgatT~~ey~~~~e~d~al~rrF~~i~v~ep~~~~~~~iL~~~~~~ye~~h~v~~~~~al~~av~ls~ryi~~r~lPdk 415 (798)
T Consensus 152 FilaTT~~--~kip--~-TilSRc~~f~l~~~~~~~i~~~l~~i~~~----E~i~~~~~al~~ia~~a~Gs~Rd------ 216 (717)
T PRK08853 152 FLLATTDP--QKLP--V-TILSRCLQFHLKPISVDQIHQQLDFVLDK----EQVSAEARALGLIAHAADGSMRD------ 216 (717)
T ss_pred EEEECCCH--HHCC--H-HHHHHHHHCCCCCCCHHHHHHHHHHHHHH----CCCCCCHHHHHHHHHHCCCCHHH------
T ss_conf 99843873--4373--8-89876544232689999999999999997----59876999999999976883778------
Q ss_pred HHHHHHHHHHH
Q ss_conf 98899865333
Q gi|254780163|r 416 AIDVIDEAGAS 426 (798)
Q Consensus 416 AidllDea~a~ 426 (798)
T Consensus 217 alsl~dqaia~ 227 (717)
T PRK08853 217 ALSLTDQAIAL 227 (717)
T ss_pred HHHHHHHHHHH
T ss_conf 88899999996