HHsearch alignment for GI: 254780163 and conserved domain: PRK09183

Probab=98.42  E-value=1.2e-06  Score=66.98  Aligned_cols=99  Identities=20%  Similarity=0.346  Sum_probs=51.5

Q ss_pred             EEEEECCCCHHHHHHHHHHHH---HCCCCEEEEEHHHHHCCCCCCHHCCCCCHHCCCCCCCCCCHHHHH--CCCEEEEEC
Q ss_conf             688614320038899999873---047733772068861246530110478000256444310035551--585177740
Q gi|254780163|r  509 CYVFSGPTGVGKTEISKQLAF---ALGVQLLRFDMSEYMERHAVSRLIGAPPGYVGFGQGGILADSVDQ--NPYSVVLLD  583 (798)
Q Consensus       509 ~flf~GptGvGKTelak~la~---~~~~~lir~dmsey~e~~~vs~LiGappGYvG~~egg~Lte~vr~--~P~sVvl~D  583 (798)
T Consensus       103 Nvil~G~~GtGKThLA~Alg~~A~~~G~~v~f~~~~~L~~~L~~a~~~------------~~~~~~l~r~l~~~dLLIiD  170 (258)
T PRK09183        103 NIVLLGPSGVGKTHLAIALGYEAVRAGIKVRFTTAADLLLQLSTAQRQ------------GRYKTTLQRGVMAPRLLIID  170 (258)
T ss_pred             CEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHC------------CCHHHHHHHHHCCCCEEEEH
T ss_conf             679989999868999999999999879939997899999999999876------------85999999874346514431


Q ss_pred             CH--HHCCHHHHHHHHHHHHHHHCCCCCCCEECCCCEEEEEECCCCHHH
Q ss_conf             44--550289999999987775021779977612542999942421455
Q gi|254780163|r  584 EI--EKSHPDVLNILLQIMDYGILTDQSGKKISFRNVILIMTTNAGALE  630 (798)
Q Consensus       584 Ei--EKAh~~v~~~llqild~G~ltd~~Gr~vdf~n~iii~TsN~G~~~  630 (798)
T Consensus       171 dlG~~~~~~~~~~~lfeli~~Ry-----e~-----~S-~IiTSn~~~~~  208 (258)
T PRK09183        171 EIGYLPFSQEEANLFFQVIAKRY-----EK-----GA-MILTSNLPFGQ  208 (258)
T ss_pred             HHHCCCCCHHHHHHHHHHHHHHH-----CC-----CC-EEEECCCCHHH
T ss_conf             33154688889999999999985-----76-----77-89988999789