HHsearch alignment for GI: 254780163 and conserved domain: PRK10787

>PRK10787 DNA-binding ATP-dependent protease La; Provisional.
Probab=99.86  E-value=2.2e-19  Score=158.52  Aligned_cols=293  Identities=22%  Similarity=0.355  Sum_probs=211.8

Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHCCHHHHHHHCHHHHH
Q ss_conf             01555646798899865333321144322113657899986631024531011100112334210000246653458999
Q gi|254780163|r  407 FTSRKLPDKAIDVIDEAGASQILQPLSKRRKFITEKDIKKTIASMNRSIHTTSFSRDDDSVLSNLEKNLGTVVYGQEEAI  486 (798)
Q Consensus       407 i~~r~lPdkAidllDea~a~~~~~~~~~~~~~~~~~~i~~~~~~~~~gip~~~~~~~~~~~l~~l~~~l~~~v~GQ~~ai  486 (798)
T Consensus       258 i~~~~~p~~~~~~~~~E-----l~rl~~~~~~s~E~~v~r~YLd~l~~LPW~~~t~d~-~dl~~A~~iLd~dHyGL~~vK  331 (784)
T PRK10787        258 IDAAKMPKEAKEKAEAE-----LQKLKMMSPMSAEATVVRGYIDWMVQVPWNARSKVK-KDLRQAQEILDTDHYGLERVK  331 (784)
T ss_pred             HHHCCCCHHHHHHHHHH-----HHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCC-CCHHHHHHHHHHHHCCHHHHH
T ss_conf             98779998999999999-----999971899894188999999999759988887875-699999998765430657799


Q ss_pred             HHHHHHHHHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEEEHHHHHCCCCCCHHCCCCCHHCCCCCCC
Q ss_conf             99999987752044565787406886143200388999998730477337720688612465301104780002564443
Q gi|254780163|r  487 KKLSSSIKIARAGLSDPNKPIGCYVFSGPTGVGKTEISKQLAFALGVQLLRFDMSEYMERHAVSRLIGAPPGYVGFGQGG  566 (798)
Q Consensus       487 ~~v~~~i~~~~~gl~~~~rP~g~flf~GptGvGKTelak~la~~~~~~lir~dmsey~e~~~vs~LiGappGYvG~~egg  566 (798)
T Consensus       332 eRile~lAv~~~~-~~~kg~I--lclvGpPGvGKTSl~~sIA~al~r~f~rislGGv~D---eaeirGHrrTYvgam-pG  404 (784)
T PRK10787        332 DRILEYLAVQSRV-NKIKGPI--LCLVGPPGVGKTSLGQSIAKATGRKYVRMALGGVRD---EAEIRGHRRTYIGSM-PG  404 (784)
T ss_pred             HHHHHHHHHHHHC-CCCCCCE--EEEECCCCCCHHHHHHHHHHHHCCCEEEEECCCCCC---HHHHCCCCCCCCCCC-CH
T ss_conf             9999999999862-4677877--996469987724699999998589869980688788---888256433434436-83


Q ss_pred             CCCHHHHH--CCCEEEEECCHHHCCH----HHHHHHHHHHHH---HHCCCCC-CCEECCCCEEEEEECCCCHHHHHHCCC
Q ss_conf             10035551--5851777404455028----999999998777---5021779-977612542999942421455330368
Q gi|254780163|r  567 ILADSVDQ--NPYSVVLLDEIEKSHP----DVLNILLQIMDY---GILTDQS-GKKISFRNVILIMTTNAGALEMSKARI  636 (798)
Q Consensus       567 ~Lte~vr~--~P~sVvl~DEiEKAh~----~v~~~llqild~---G~ltd~~-Gr~vdf~n~iii~TsN~G~~~~~~~~~  636 (798)
T Consensus       405 rii~~l~~a~~~nPv~llDEiDK~~~~~~Gdp~salLEvLDpeQN~~F~Dhyl~~~~DlS~v~Fi~TaN~----------  474 (784)
T PRK10787        405 KLIQKMAKVGVKNPLFLLDEIDKMSSDMRGDPASALLEVLDPEQNVAFSDHYLEVDYDLSDVMFVATSNS----------  474 (784)
T ss_pred             HHHHHHHHHCCCCCEEEEHHHHHHCCCCCCCHHHHHHHHCCHHHCCCCCCCEEECCCCHHHEEEEEECCC----------
T ss_conf             8999999748988566500355522455899889999845976556400032204645222589973276----------


Q ss_pred             CCCCCCCHHHHHHHHHHHCCHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCC---EEEECHHHHHHHHHCC
Q ss_conf             9882111488999998728878817768289628899999999999999999999986698---8999889999999718
Q gi|254780163|r  637 GFGSSRNDDADKEALRNFLSPEFLNRLDSIIPFFPLSSDIIRQVVHKFIMKLELQLQEKGI---SFHFSEEVINWLVSHG  713 (798)
Q Consensus       637 g~~~~~~~~~~~~~l~~~f~peflnRid~ii~F~~l~~~~~~~i~~~~l~~l~~~l~~~~i---~l~~~~~~~~~l~~~~  713 (798)
T Consensus       475 --------------~-~-ip~pLlDRm-E~i~~~gYt~~eK~~Ia~~~l--~p~~~~~~gl~~~~~~~~~~~~~~ii~-~  534 (784)
T PRK10787        475 --------------M-N-IPAPLLDRM-EVIRLSGYTEDEKLNIAKRHL--LPKQIERNALKKGELTVDDSAIIGIIR-Y  534 (784)
T ss_pred             --------------C-C-CCHHHHHHE-EEEEECCCCHHHHHHHHHHHC--HHHHHHHHCCCCCCCCCCHHHHHHHHH-H
T ss_conf             --------------7-7-876776312-155411676788999999745--399999828996567439999999875-3


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf             981015326799999862359999996296
Q gi|254780163|r  714 YDVKMGARPLERIIKEHVKVPLADEILFGK  743 (798)
Q Consensus       714 ~~~~~GAR~l~r~i~~~i~~~la~~il~~~  743 (798)
T Consensus       535 ytrEaGvR~ler~i~~i~rk-~~~~~~~~~  563 (784)
T PRK10787        535 YTREAGVRSLEREISKLCRK-AVKQLLLDK  563 (784)
T ss_pred             CCCCCCCCCHHHHHHHHHHH-HHHHHHCCC
T ss_conf             36544425168899999999-999997078