HHsearch alignment for GI: 254780163 and conserved domain: PRK10787
>PRK10787 DNA-binding ATP-dependent protease La; Provisional.
Probab=99.86 E-value=2.2e-19 Score=158.52 Aligned_cols=293 Identities=22% Similarity=0.355 Sum_probs=211.8
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHCCHHHHHHHCHHHHH
Q ss_conf 01555646798899865333321144322113657899986631024531011100112334210000246653458999
Q gi|254780163|r 407 FTSRKLPDKAIDVIDEAGASQILQPLSKRRKFITEKDIKKTIASMNRSIHTTSFSRDDDSVLSNLEKNLGTVVYGQEEAI 486 (798)
Q Consensus 407 i~~r~lPdkAidllDea~a~~~~~~~~~~~~~~~~~~i~~~~~~~~~gip~~~~~~~~~~~l~~l~~~l~~~v~GQ~~ai 486 (798)
T Consensus 258 i~~~~~p~~~~~~~~~E-----l~rl~~~~~~s~E~~v~r~YLd~l~~LPW~~~t~d~-~dl~~A~~iLd~dHyGL~~vK 331 (784)
T PRK10787 258 IDAAKMPKEAKEKAEAE-----LQKLKMMSPMSAEATVVRGYIDWMVQVPWNARSKVK-KDLRQAQEILDTDHYGLERVK 331 (784)
T ss_pred HHHCCCCHHHHHHHHHH-----HHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCC-CCHHHHHHHHHHHHCCHHHHH
T ss_conf 98779998999999999-----999971899894188999999999759988887875-699999998765430657799
Q ss_pred HHHHHHHHHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEEEHHHHHCCCCCCHHCCCCCHHCCCCCCC
Q ss_conf 99999987752044565787406886143200388999998730477337720688612465301104780002564443
Q gi|254780163|r 487 KKLSSSIKIARAGLSDPNKPIGCYVFSGPTGVGKTEISKQLAFALGVQLLRFDMSEYMERHAVSRLIGAPPGYVGFGQGG 566 (798)
Q Consensus 487 ~~v~~~i~~~~~gl~~~~rP~g~flf~GptGvGKTelak~la~~~~~~lir~dmsey~e~~~vs~LiGappGYvG~~egg 566 (798)
T Consensus 332 eRile~lAv~~~~-~~~kg~I--lclvGpPGvGKTSl~~sIA~al~r~f~rislGGv~D---eaeirGHrrTYvgam-pG 404 (784)
T PRK10787 332 DRILEYLAVQSRV-NKIKGPI--LCLVGPPGVGKTSLGQSIAKATGRKYVRMALGGVRD---EAEIRGHRRTYIGSM-PG 404 (784)
T ss_pred HHHHHHHHHHHHC-CCCCCCE--EEEECCCCCCHHHHHHHHHHHHCCCEEEEECCCCCC---HHHHCCCCCCCCCCC-CH
T ss_conf 9999999999862-4677877--996469987724699999998589869980688788---888256433434436-83
Q ss_pred CCCHHHHH--CCCEEEEECCHHHCCH----HHHHHHHHHHHH---HHCCCCC-CCEECCCCEEEEEECCCCHHHHHHCCC
Q ss_conf 10035551--5851777404455028----999999998777---5021779-977612542999942421455330368
Q gi|254780163|r 567 ILADSVDQ--NPYSVVLLDEIEKSHP----DVLNILLQIMDY---GILTDQS-GKKISFRNVILIMTTNAGALEMSKARI 636 (798)
Q Consensus 567 ~Lte~vr~--~P~sVvl~DEiEKAh~----~v~~~llqild~---G~ltd~~-Gr~vdf~n~iii~TsN~G~~~~~~~~~ 636 (798)
T Consensus 405 rii~~l~~a~~~nPv~llDEiDK~~~~~~Gdp~salLEvLDpeQN~~F~Dhyl~~~~DlS~v~Fi~TaN~---------- 474 (784)
T PRK10787 405 KLIQKMAKVGVKNPLFLLDEIDKMSSDMRGDPASALLEVLDPEQNVAFSDHYLEVDYDLSDVMFVATSNS---------- 474 (784)
T ss_pred HHHHHHHHHCCCCCEEEEHHHHHHCCCCCCCHHHHHHHHCCHHHCCCCCCCEEECCCCHHHEEEEEECCC----------
T ss_conf 8999999748988566500355522455899889999845976556400032204645222589973276----------
Q ss_pred CCCCCCCHHHHHHHHHHHCCHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCC---EEEECHHHHHHHHHCC
Q ss_conf 9882111488999998728878817768289628899999999999999999999986698---8999889999999718
Q gi|254780163|r 637 GFGSSRNDDADKEALRNFLSPEFLNRLDSIIPFFPLSSDIIRQVVHKFIMKLELQLQEKGI---SFHFSEEVINWLVSHG 713 (798)
Q Consensus 637 g~~~~~~~~~~~~~l~~~f~peflnRid~ii~F~~l~~~~~~~i~~~~l~~l~~~l~~~~i---~l~~~~~~~~~l~~~~ 713 (798)
T Consensus 475 --------------~-~-ip~pLlDRm-E~i~~~gYt~~eK~~Ia~~~l--~p~~~~~~gl~~~~~~~~~~~~~~ii~-~ 534 (784)
T PRK10787 475 --------------M-N-IPAPLLDRM-EVIRLSGYTEDEKLNIAKRHL--LPKQIERNALKKGELTVDDSAIIGIIR-Y 534 (784)
T ss_pred --------------C-C-CCHHHHHHE-EEEEECCCCHHHHHHHHHHHC--HHHHHHHHCCCCCCCCCCHHHHHHHHH-H
T ss_conf --------------7-7-876776312-155411676788999999745--399999828996567439999999875-3
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 981015326799999862359999996296
Q gi|254780163|r 714 YDVKMGARPLERIIKEHVKVPLADEILFGK 743 (798)
Q Consensus 714 ~~~~~GAR~l~r~i~~~i~~~la~~il~~~ 743 (798)
T Consensus 535 ytrEaGvR~ler~i~~i~rk-~~~~~~~~~ 563 (784)
T PRK10787 535 YTREAGVRSLEREISKLCRK-AVKQLLLDK 563 (784)
T ss_pred CCCCCCCCCHHHHHHHHHHH-HHHHHHCCC
T ss_conf 36544425168899999999-999997078