HHsearch alignment for GI: 254780163 and conserved domain: PRK10820

>PRK10820 DNA-binding transcriptional regulator TyrR; Provisional.
Probab=99.39  E-value=3.3e-11  Score=99.71  Aligned_cols=215  Identities=20%  Similarity=0.287  Sum_probs=156.8

Q ss_pred             HHHHHCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHC---CCCEEEEEHHHHHCCCCCCHH
Q ss_conf             46653458999999999877520445657874068861432003889999987304---773377206886124653011
Q gi|254780163|r  476 GTVVYGQEEAIKKLSSSIKIARAGLSDPNKPIGCYVFSGPTGVGKTEISKQLAFAL---GVQLLRFDMSEYMERHAVSRL  552 (798)
Q Consensus       476 ~~~v~GQ~~ai~~v~~~i~~~~~gl~~~~rP~g~flf~GptGvGKTelak~la~~~---~~~lir~dmsey~e~~~vs~L  552 (798)
T Consensus       203 F~~iig~S~~m~~v~~~a~r~----A~~d~p---VLI~GEsGTGKellAraIH~~S~R~~~pFv~vnC~alp~~l~eseL  275 (513)
T PRK10820        203 FSQIVAVSPKMKHVVEQARKL----AMLSAP---LLITGDTGTGKDLFAYACHLASPRAKKPYLALNCASIPEDAVESEL  275 (513)
T ss_pred             HHHHEECCHHHHHHHHHHHHH----HCCCCC---EEEECCCCCCHHHHHHHHHHCCCCCCCCCEEEECCCCCHHHHHHHH
T ss_conf             777510899999999999998----598998---8998989824999999999668878998268889989967899986


Q ss_pred             CCCCCHHCCCCCCCCCCHHHHHCCCEEEEECCHHHCCHHHHHHHHHHHHHHHCCC---CCCCEECCCCEEEEEECCCCHH
Q ss_conf             0478000256444310035551585177740445502899999999877750217---7997761254299994242145
Q gi|254780163|r  553 IGAPPGYVGFGQGGILADSVDQNPYSVVLLDEIEKSHPDVLNILLQIMDYGILTD---QSGKKISFRNVILIMTTNAGAL  629 (798)
Q Consensus       553 iGappGYvG~~egg~Lte~vr~~P~sVvl~DEiEKAh~~v~~~llqild~G~ltd---~~Gr~vdf~n~iii~TsN~G~~  629 (798)
T Consensus       276 FG~a~----~~~~G~fe----~A~gGTLfLdEI~~l~~~~Q~kLLr~Lq~~~~~rvG~~~~~~~---dvRiIaaT~~d--  342 (513)
T PRK10820        276 FGHAP----EGKKGFFE----QANGGSVLLDEIGEMSPRMQAKLLRFLNDGTFRRVGEDHEVHV---DVRVICATQKN--  342 (513)
T ss_pred             CCCCC----CCCCCCEE----ECCCCEEEEECHHHCCHHHHHHHHHHHHCCEEEECCCCCEEEE---EEEEEECCCHH--
T ss_conf             38766----68897557----8589889997836599999999999986897996599853567---78999626530--


Q ss_pred             HHHHCCCCCCCCCCHHHHHHHH-HHHCCHHHHCCCCEEE-ECCCCC--HHHHHHHHHHHHHHHHHHHHHCCCEEEECHHH
Q ss_conf             5330368988211148899999-8728878817768289-628899--99999999999999999998669889998899
Q gi|254780163|r  630 EMSKARIGFGSSRNDDADKEAL-RNFLSPEFLNRLDSII-PFFPLS--SDIIRQVVHKFIMKLELQLQEKGISFHFSEEV  705 (798)
Q Consensus       630 ~~~~~~~g~~~~~~~~~~~~~l-~~~f~peflnRid~ii-~F~~l~--~~~~~~i~~~~l~~l~~~l~~~~i~l~~~~~~  705 (798)
T Consensus       343 -----------------L~~lv~~g~FReDLyyRL~v~~I~lPpLReR~eDI~~L~~~fl~~~~~~~g~~--~~~ls~~a  403 (513)
T PRK10820        343 -----------------LVELVQKGLFREDLYYRLNVLTLNLPPLRDCPQDIMPLTELFVARFADEQGVP--RPKLSADL  403 (513)
T ss_pred             -----------------HHHHHHCCCCCHHHHHHHHCCCCCCCCHHHCHHHHHHHHHHHHHHHHHHCCCC--CCCCCHHH
T ss_conf             -----------------99998729850889998616725588834465569999999999999975999--89847999


Q ss_pred             HHHHHHCCCCCCCCCHHHHHHHHHHH
Q ss_conf             99999718981015326799999862
Q gi|254780163|r  706 INWLVSHGYDVKMGARPLERIIKEHV  731 (798)
Q Consensus       706 ~~~l~~~~~~~~~GAR~l~r~i~~~i  731 (798)
T Consensus       404 ~~~L~~y~WP--GNVREL~n~iera~  427 (513)
T PRK10820        404 STVLTRYGWP--GNVRQLKNAIYRAL  427 (513)
T ss_pred             HHHHHHCCCC--CHHHHHHHHHHHHH
T ss_conf             9999708999--79999999999999