HHsearch alignment for GI: 254780163 and conserved domain: PRK11034
>PRK11034 clpA ATP-dependent Clp protease ATP-binding subunit; Provisional.
Probab=100.00 E-value=0 Score=1866.43 Aligned_cols=744 Identities=51% Similarity=0.852 Sum_probs=703.4
Q ss_pred CCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf 34389999999999999982899511999999982074689999985999899999999996413654577888677646
Q gi|254780163|r 3 FFSENLEKVLHQALVLANERNHEYATLEHLLLALIDDSDAAIVMLSCNVDLKVLKNNLLNYIDNDSSNKLKNGFRVECKP 82 (798)
Q Consensus 3 mfS~~a~~vL~~A~~lAk~~~H~~Vt~EHLLLaLL~d~~~~~iL~~~giD~~~Lk~~Le~~L~~~~~~~~~~~~~~ei~~ 82 (798)
T Consensus 1 m~s~~l~~~L~~A~~~A~~~~H~~v~~EHlLlaLl~~~~~~~~L~~~~~d~~~l~~~l~~~i~~~~~~~~~~~~~~~~~~ 80 (758)
T PRK11034 1 MLNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEAFIEQTTPVLPASEEERDTQP 80 (758)
T ss_pred CCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
T ss_conf 98979999999999999982998322999999998694189999985999999999999999725887788877567787
Q ss_pred CHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCC
Q ss_conf 98999999999999998099812599987878737742999999984999899999998300000001112110244321
Q gi|254780163|r 83 TSSFQRVVQRAVLHVQSTGRGIVTGANILVALFSEPDSHATYFLQEQEMTLYDAVNFISHGISKRKEFANFQSKLNVDGS 162 (798)
Q Consensus 83 S~~l~rVL~~A~~~A~~~G~~~I~~eHLLLALL~e~ds~a~~iL~~~gis~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~ 162 (798)
T Consensus 81 t~~~~rvl~~A~~~a~~~g~~~v~~~~lLlall~e~~~~a~~~L~~~~i~~~~~~~~i~~~~~~~~~~~~~~-------- 152 (758)
T PRK11034 81 TLSFQRVLQRAVFHVQSSGRSEVTGANVLVAIFSEQESQAAYLLRKHEVSRLDVVNFISHGTRKDEPSQSSD-------- 152 (758)
T ss_pred CHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCC--------
T ss_conf 778999999999999983998304999999997178558999999779988999999972243344333445--------
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHH
Q ss_conf 00000124444444555544553035654425887754861122217899999999862267787489667641166899
Q gi|254780163|r 163 SAGSDGEGFVNDYQAKTDLNLFPALSAYCVDLTEKVKKGKVDILVGRHEEINRTIQILCRRSKNNPLYVGDPGVGKTAIA 242 (798)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~LdkFg~DLTe~AreGKLDPVIGRd~EI~riiqIL~RR~KNn~~lvG~~gvGktaiv 242 (798)
T Consensus 153 --------~~~~~~~~~~~~~~~~L~ky~~dLt~~Ar~gklDPviGR~~Ei~r~i~iL~Rr~KNNpiLvGepGVGKTAIv 224 (758)
T PRK11034 153 --------PGSQPNSEEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIA 224 (758)
T ss_pred --------CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHH
T ss_conf --------556766533444235899985647999982899987384899999999997632589602169998699999
Q ss_pred HHHHHHHHCCCCCHHHHEEEEEEEEHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCHHHHHCCCCCCCCCCCHH
Q ss_conf 99999985489883452014455404675306343123789999999872038983999736166301554443447778
Q gi|254780163|r 243 EGFAKQIVDGMVPDILLGARIFSLDMGNLIAGTRYRGDFEERIKKIVKEIESYANAILYIDEIHTLVGAGSASGISVDAS 322 (798)
Q Consensus 243 e~la~~i~~~~vp~~l~~~~i~~ld~~~l~ag~~~rg~fe~r~~~~~~~~~~~~~~ilfideih~ligag~~~g~~~d~a 322 (798)
T Consensus 225 EGLA~rI~~g~VP~~L~~~~i~~Ldl~~LiAGtkyRGefEeRlk~vi~e~~~~~~~ILFIDEiH~ivGaG~~~gg~~Daa 304 (758)
T PRK11034 225 EGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAA 304 (758)
T ss_pred HHHHHHHHCCCCCHHHCCCEEEEEEHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECHHHHCCCCCCCCCCCCHH
T ss_conf 99999997389976558988998458778616864154999999999999857985999804344226887677764678
Q ss_pred HHHHHHHCCCCEEEEEECCHHHHHHHHHCCHHHHHHCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCEECCHHHHHHHHH
Q ss_conf 88876630266038873048999998520111432001443068786899999986127665410351211178999998
Q gi|254780163|r 323 NLLKPALSSGAVRCIGSTTYSEYRQFFEKDKALVRRFQKIDVSEPSIEDAIEIVKGIKPYFEEHHQLRYSKEAIRAAVQL 402 (798)
Q Consensus 323 n~lkP~L~rg~~~~IgatT~~ey~~~~e~d~al~rrF~~i~v~ep~~~~~~~iL~~~~~~ye~~h~v~~~~~al~~av~l 402 (798)
T Consensus 305 NlLKP~LarG~l~~IgaTT~~EYrk~iekD~AL~RRFq~V~V~EPs~e~t~~IL~gl~~~yE~~H~v~~~d~al~~av~L 384 (758)
T PRK11034 305 NLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVEL 384 (758)
T ss_pred HHHHHHHHCCCCEEEEECCHHHHHHCCCCCHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHCCCCEECCHHHHHHHHH
T ss_conf 87457874697239994377998750321478884282653189998999999998999873236957743899999999
Q ss_pred HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHCCHHHHHHHCH
Q ss_conf 65420155564679889986533332114432211365789998663102453101110011233421000024665345
Q gi|254780163|r 403 SVRHFTSRKLPDKAIDVIDEAGASQILQPLSKRRKFITEKDIKKTIASMNRSIHTTSFSRDDDSVLSNLEKNLGTVVYGQ 482 (798)
Q Consensus 403 s~ryi~~r~lPdkAidllDea~a~~~~~~~~~~~~~~~~~~i~~~~~~~~~gip~~~~~~~~~~~l~~l~~~l~~~v~GQ 482 (798)
T Consensus 385 s~rYi~dr~lPDKAIdllDea~a~~~l~~~~~~~~~v~~~di~~vv~~~t-~ip~~~~~~~~~~~l~~le~~l~~~viGQ 463 (758)
T PRK11034 385 AVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVARIA-RIPEKSVSQSDRDTLKNLGDRLKMLVFGQ 463 (758)
T ss_pred HHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 97650268896199999999988875134566316589999999998750-36076776779999998999987787454
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEEEHHHHHCCCCCCHHCCCCCHHCCC
Q ss_conf 89999999998775204456578740688614320038899999873047733772068861246530110478000256
Q gi|254780163|r 483 EEAIKKLSSSIKIARAGLSDPNKPIGCYVFSGPTGVGKTEISKQLAFALGVQLLRFDMSEYMERHAVSRLIGAPPGYVGF 562 (798)
Q Consensus 483 ~~ai~~v~~~i~~~~~gl~~~~rP~g~flf~GptGvGKTelak~la~~~~~~lir~dmsey~e~~~vs~LiGappGYvG~ 562 (798)
T Consensus 464 ~~Ai~~v~~ai~~~raGL~~~~rPigsFlf~GPTGVGKTElak~LA~~L~~~lir~DMSEy~e~hsvsrLiGaPPGYVGy 543 (758)
T PRK11034 464 DKAIEALTEAIKMSRAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPGYVGF 543 (758)
T ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHCCCCCCCCCC
T ss_conf 99999999999998638889999705899978998777999999999986677214266531201477744899866676
Q ss_pred CCCCCCCHHHHHCCCEEEEECCHHHCCHHHHHHHHHHHHHHHCCCCCCCEECCCCEEEEEECCCCHHHHHHCCCCCCCCC
Q ss_conf 44431003555158517774044550289999999987775021779977612542999942421455330368988211
Q gi|254780163|r 563 GQGGILADSVDQNPYSVVLLDEIEKSHPDVLNILLQIMDYGILTDQSGKKISFRNVILIMTTNAGALEMSKARIGFGSSR 642 (798)
Q Consensus 563 ~egg~Lte~vr~~P~sVvl~DEiEKAh~~v~~~llqild~G~ltd~~Gr~vdf~n~iii~TsN~G~~~~~~~~~g~~~~~ 642 (798)
T Consensus 544 ~eGG~Lte~Vr~~PysVvL~DEIEKAhpdV~nilLQvlD~G~LtD~~Gr~vdF~NtiIImTSN~Ga~~~~~~~~gf~~~~ 623 (758)
T PRK11034 544 DQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNLLLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQD 623 (758)
T ss_pred CCCCCCCHHHHHCCCEEEEEHHHHHHCHHHHHHHHHHCCCCCCCCCCCCEEECEEEEEEEECCCCHHHHHHHCCCCCCCC
T ss_conf 77770128787398779973367563989999887323778301799998844001999825617487864214755420
Q ss_pred CHHHHHHHHHHHCCHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHCCCCCCCCCHH
Q ss_conf 14889999987288788177682896288999999999999999999999866988999889999999718981015326
Q gi|254780163|r 643 NDDADKEALRNFLSPEFLNRLDSIIPFFPLSSDIIRQVVHKFIMKLELQLQEKGISFHFSEEVINWLVSHGYDVKMGARP 722 (798)
Q Consensus 643 ~~~~~~~~l~~~f~peflnRid~ii~F~~l~~~~~~~i~~~~l~~l~~~l~~~~i~l~~~~~~~~~l~~~~~~~~~GAR~ 722 (798)
T Consensus 624 ~~~~~~~~l~~~F~PEFlNRiD~ii~F~~L~~~~l~~Iv~~~l~~l~~rL~~~~i~l~~~~~a~~~l~~~gyd~~~GARp 703 (758)
T PRK11034 624 NSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQAQLDQKGVSLEVSQEARDWLAEKGYDRAMGARP 703 (758)
T ss_pred CHHHHHHHHHHHCCHHHHHHCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHHCCCCCCCCCH
T ss_conf 35999999995479867723674786388999999999999999999999978985998899999999848894537112
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCC
Q ss_conf 799999862359999996296768884899996078665542
Q gi|254780163|r 723 LERIIKEHVKVPLADEILFGKLKKGGGVVKVSLNPDKSASSP 764 (798)
Q Consensus 723 l~r~i~~~i~~~la~~il~~~~~~g~~~~~v~~~~~~~~~~~ 764 (798)
T Consensus 704 l~R~I~~~i~~~La~~il~g~~~~g~~-v~v~~~~~~~~l~f 744 (758)
T PRK11034 704 MARVIQDNLKKPLANELLFGSLVDGGQ-VTVALDKEKNELTY 744 (758)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCE-EEEEEECCCCEEEE
T ss_conf 889999998899999997298889898-99999789987999