HHsearch alignment for GI: 254780163 and conserved domain: PRK11034
>PRK11034 clpA ATP-dependent Clp protease ATP-binding subunit; Provisional.
Probab=99.09 E-value=2.8e-06 Score=64.30 Aligned_cols=62 Identities=18% Similarity=0.176 Sum_probs=53.8
Q ss_pred CCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHCC
Q ss_conf 6989999999999999980998125999878787377429999999849998999999983000
Q gi|254780163|r 82 PTSSFQRVVQRAVLHVQSTGRGIVTGANILVALFSEPDSHATYFLQEQEMTLYDAVNFISHGIS 145 (798)
Q Consensus 82 ~S~~l~rVL~~A~~~A~~~G~~~I~~eHLLLALL~e~ds~a~~iL~~~gis~~~v~~~i~~~~~ 145 (798)
T Consensus 2 ~s~~l~~~L~~A~~~A~~~~H~~v~~EHlLlaLl~~~--~~~~~L~~~~~d~~~l~~~l~~~i~ 63 (758)
T PRK11034 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNP--SAREALEACSVDLVALRQELEAFIE 63 (758)
T ss_pred CCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCC--HHHHHHHHCCCCHHHHHHHHHHHHH
T ss_conf 8979999999999999982998322999999998694--1899999859999999999999997