HHsearch alignment for GI: 254780163 and conserved domain: PRK13342

Probab=99.77  E-value=2.7e-17  Score=143.42  Aligned_cols=245  Identities=24%  Similarity=0.370  Sum_probs=167.6

Q ss_pred             HHHHHCCCCHHHHHHHHH------HHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCHHHHEEEEEEEEH
Q ss_conf             887754861122217899------99999986226778748966764116689999999985489883452014455404
Q gi|254780163|r  195 TEKVKKGKVDILVGRHEE------INRTIQILCRRSKNNPLYVGDPGVGKTAIAEGFAKQIVDGMVPDILLGARIFSLDM  268 (798)
Q Consensus       195 Te~AreGKLDPVIGRd~E------I~riiqIL~RR~KNn~~lvG~~gvGktaive~la~~i~~~~vp~~l~~~~i~~ld~  268 (798)
T Consensus         4 Aer~RP~~lde~vGQ~hllg~~~~L~~~i---~~~~~~s~Il~GPPG~GKTTlA~iiA~~~----------~~~f~~lnA   70 (417)
T PRK13342          4 AERMRPKTLDEVVGQEHLLGPGKPLRRMI---EAGRLSSMILWGPPGTGKTTLARIIAGAT----------DAEFEALSA   70 (417)
T ss_pred             HHHHCCCCHHHHCCCHHHHCCCHHHHHHH---HCCCCCEEEEECCCCCCHHHHHHHHHHHH----------CCCEEEEEC
T ss_conf             16449998888579877608971999999---76999759988969998999999999986----------898899614


Q ss_pred             HHHHCCCCCCCHHHHHHHHHHHHHCCC---CCEEEEECCHHHHHCCCCCCCCCCCHHHHHHHHHCCCCEEEEEECCHHHH
Q ss_conf             675306343123789999999872038---98399973616630155444344777888876630266038873048999
Q gi|254780163|r  269 GNLIAGTRYRGDFEERIKKIVKEIESY---ANAILYIDEIHTLVGAGSASGISVDASNLLKPALSSGAVRCIGSTTYSEY  345 (798)
Q Consensus       269 ~~l~ag~~~rg~fe~r~~~~~~~~~~~---~~~ilfideih~ligag~~~g~~~d~an~lkP~L~rg~~~~IgatT~~ey  345 (798)
T Consensus        71 ~~--~gv-------~dir~ii~~a~~~~~~~~tilfiDEIHRf---------nK~QQD~LLp~vE~g~iiLIgATTENP~  132 (417)
T PRK13342         71 VT--SGV-------KDLREVIEEAKQSRLGRRTILFIDEIHRF---------NKAQQDALLPHVEDGTITLIGATTENPS  132 (417)
T ss_pred             CC--CCH-------HHHHHHHHHHHHHHCCCCEEEEEECHHHC---------CHHHHHHHHHHHHCCCEEEEEECCCCCH
T ss_conf             10--388-------99999999988631489659999782005---------8899999987511265699974157922


Q ss_pred             HHHHHCCHHHHHHCEEEEECCCCHHHHHHHHHHHHHHHH--HHCCCEECCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
Q ss_conf             998520111432001443068786899999986127665--410351211178999998654201555646798899865
Q gi|254780163|r  346 RQFFEKDKALVRRFQKIDVSEPSIEDAIEIVKGIKPYFE--EHHQLRYSKEAIRAAVQLSVRHFTSRKLPDKAIDVIDEA  423 (798)
Q Consensus       346 ~~~~e~d~al~rrF~~i~v~ep~~~~~~~iL~~~~~~ye--~~h~v~~~~~al~~av~ls~ryi~~r~lPdkAidllDea  423 (798)
T Consensus       133 ---f~in~aLlSRc~vf~l~~L~~~di~~iL~ral~~-e~~~~~~i~i~~~al~~i~~~s~GD------aR~aLN~LE~a  202 (417)
T PRK13342        133 ---FEVNPALLSRAQVFELKPLSEEDLEQLLKRALED-ERGLGRKLELDDEALDALARLADGD------ARRALNLLELA  202 (417)
T ss_pred             ---HHCCHHHHHHHHHEECCCCCHHHHHHHHHHHHHH-HHCCCCCCCCCHHHHHHHHHHCCCC------HHHHHHHHHHH
T ss_conf             ---5348989856570020589999999999999987-7433788776999999999814985------99999999999


Q ss_pred             HHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHCCHHHHHHHCHH--HHHHHHHHH
Q ss_conf             333321144322113657899986631024531011100112334210000246653458--999999999
Q gi|254780163|r  424 GASQILQPLSKRRKFITEKDIKKTIASMNRSIHTTSFSRDDDSVLSNLEKNLGTVVYGQE--EAIKKLSSS  492 (798)
Q Consensus       424 ~a~~~~~~~~~~~~~~~~~~i~~~~~~~~~gip~~~~~~~~~~~l~~l~~~l~~~v~GQ~--~ai~~v~~~  492 (798)
T Consensus       203 ~~------~~~~~~~i~~~~~~~~~~~~~--~---~yDk~gd~-HYd~iSAf~KSiRGSDpdAAlyyLarm  261 (417)
T PRK13342        203 AA------AAAGGEVITLELLEEALQRRA--A---RYDKDGDE-HYDLISALHKSIRGSDPDAALYYLARM  261 (417)
T ss_pred             HH------CCCCCCCCCHHHHHHHHHHCC--C---CCCCCCCH-HHHHHHHHHHHHHCCCCCHHHHHHHHH
T ss_conf             85------258997348999999984410--3---57778634-789999999985169954899999999