HHsearch alignment for GI: 254780163 and conserved domain: PRK13531

>PRK13531 regulatory ATPase RavA; Provisional.
Probab=98.51  E-value=1.7e-07  Score=72.93  Aligned_cols=257  Identities=20%  Similarity=0.281  Sum_probs=131.7

Q ss_pred             CHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH-HHCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCC----------C
Q ss_conf             0356544258877548611222178999999998-6226778748966764116689999999985489----------8
Q gi|254780163|r  186 ALSAYCVDLTEKVKKGKVDILVGRHEEINRTIQI-LCRRSKNNPLYVGDPGVGKTAIAEGFAKQIVDGM----------V  254 (798)
Q Consensus       186 ~LdkFg~DLTe~AreGKLDPVIGRd~EI~riiqI-L~RR~KNn~~lvG~~gvGktaive~la~~i~~~~----------v  254 (798)
T Consensus         6 ~l~eri~~l~~~L~~g----l~ERe~~i~l~lLaalage---hvlllGPPGtAKS~larrl~~~~~~a~~FeyLltRFst   78 (498)
T PRK13531          6 LLAERISRLSSALEKG----LYERSHAIRLCLLAALSGE---SVFLLGPPGIAKSLIARRLKFAFQHARAFEYLMTRFST   78 (498)
T ss_pred             HHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHCCC---CEEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCC
T ss_conf             7899999999999701----1446999999999997289---46988899513889999999985574089999874698


Q ss_pred             CHHHHEEEEEEEEHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCHHHHHCCCCCCCCCCCHHHHHHHHHCCCC-
Q ss_conf             8345201445540467530634312378999999987203898399973616630155444344777888876630266-
Q gi|254780163|r  255 PDILLGARIFSLDMGNLIAGTRYRGDFEERIKKIVKEIESYANAILYIDEIHTLVGAGSASGISVDASNLLKPALSSGA-  333 (798)
Q Consensus       255 p~~l~~~~i~~ld~~~l~ag~~~rg~fe~r~~~~~~~~~~~~~~ilfideih~ligag~~~g~~~d~an~lkP~L~rg~-  333 (798)
T Consensus        79 PeElFGP----~si~~Lk~~----g~y~R~t~G~L-----P~A~iaFLDEIfK------a-ns--AILNtLLtilNEr~f  136 (498)
T PRK13531         79 PEEVFGP----LSIQALKDE----GRYERLTSGYL-----PEAEIVFLDEIWK------A-GP--AILNTLLTAINERRF  136 (498)
T ss_pred             HHHHCCC----CCHHHHHHC----CEEEEECCCCC-----CCCEEEHHHHHHH------C-CH--HHHHHHHHHHHHHEE
T ss_conf             8885383----329987117----84897226758-----8661315787861------4-88--999999998646403


Q ss_pred             -----------EEEEEECCHHHHHHHHHCC---HHHHHHC-EEEEECCCCHHHHHH-HHHH------------HH---HH
Q ss_conf             -----------0388730489999985201---1143200-144306878689999-9986------------12---76
Q gi|254780163|r  334 -----------VRCIGSTTYSEYRQFFEKD---KALVRRF-QKIDVSEPSIEDAIE-IVKG------------IK---PY  382 (798)
Q Consensus       334 -----------~~~IgatT~~ey~~~~e~d---~al~rrF-~~i~v~ep~~~~~~~-iL~~------------~~---~~  382 (798)
T Consensus       137 ~nG~~~~~vPL~~li~ASN--El---P~~~~~L~AlyDRfL~R~~v~~v~~~~nF~~lL~s~~~~~~~~i~~~l~is~eE  211 (498)
T PRK13531        137 RNGAHEEKIPMRLLVAASN--EL---PEADSSLEALYDRMLIRLWLDKVQDKANFRSMLVSQQDENDNPVPASLQVTDEE  211 (498)
T ss_pred             CCCCCEECCCHHHHHHCCC--CC---CCCCCCHHHHHHHHHHHEECCCCCCHHHHHHHHCCCCCCCCCCCCCCCEECHHH
T ss_conf             4798313044688643046--79---999840788887644102231316766799986178864445788557117999


Q ss_pred             HH----HHCCCEECCHHHHHHHHHH--------HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
Q ss_conf             65----4103512111789999986--------54201555646798899865333321144322113657899986631
Q gi|254780163|r  383 FE----EHHQLRYSKEAIRAAVQLS--------VRHFTSRKLPDKAIDVIDEAGASQILQPLSKRRKFITEKDIKKTIAS  450 (798)
Q Consensus       383 ye----~~h~v~~~~~al~~av~ls--------~ryi~~r~lPdkAidllDea~a~~~~~~~~~~~~~~~~~~i~~~~~~  450 (798)
T Consensus       212 ~~~wq~~i~~V~lpd~v~e~I~~lR~~l~~~e~~~YVSDRRW-kKav~LLk-asA------f~~GR~eV~~~DllLL~hC  283 (498)
T PRK13531        212 YEQWQKEIGKITLPDHVFELIFQLRQQLDALPDAPYVSDRRW-KKAIRLLQ-ASA------FFSGRDAVAPIDLILLKDC  283 (498)
T ss_pred             HHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCEEECHHH-HHHHHHHH-HHH------HCCCCCCCCHHHHHHHHCC
T ss_conf             999998620213879999999999999851567875576689-99999999-987------5169553779888998635


Q ss_pred             CCCCCCHHHHHCCHHHHHHHHCCHHHHHHHCHHHHHHHHH
Q ss_conf             0245310111001123342100002466534589999999
Q gi|254780163|r  451 MNRSIHTTSFSRDDDSVLSNLEKNLGTVVYGQEEAIKKLS  490 (798)
Q Consensus       451 ~~~gip~~~~~~~~~~~l~~l~~~l~~~v~GQ~~ai~~v~  490 (798)
T Consensus       284 LW~-d~~s~~-----~l~~~l~~~~~~~a~~Q~~~l~~~~  317 (498)
T PRK13531        284 LWH-DAQSLN-----LLQQQLEVLMTGHAWQQQGMLTRLG  317 (498)
T ss_pred             CCC-CHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             879-856789-----9999999999998888999999999