HHsearch alignment for GI: 254780163 and conserved domain: PTZ00112
>PTZ00112 origin recognition complex 1 protein; Provisional.
Probab=97.29 E-value=0.0016 Score=44.43 Aligned_cols=336 Identities=19% Similarity=0.193 Sum_probs=155.8
Q ss_pred HHHHHHHHHHHHHHHHHCCCCC----CEEEE-CCCCCHHHHHHHHHHHHH----HCCCCCHHHHEEEEEEEEHHHHHC--
Q ss_conf 2221789999999986226778----74896-676411668999999998----548988345201445540467530--
Q gi|254780163|r 205 ILVGRHEEINRTIQILCRRSKN----NPLYV-GDPGVGKTAIAEGFAKQI----VDGMVPDILLGARIFSLDMGNLIA-- 273 (798)
Q Consensus 205 PVIGRd~EI~riiqIL~RR~KN----n~~lv-G~~gvGktaive~la~~i----~~~~vp~~l~~~~i~~ld~~~l~a-- 273 (798)
T Consensus 268 ~lpcRe~E~~~I~~Fie~~i~q~GtG~cLYISGVPGTGKTATV~eVIr~L~~~~~~~~lp~F----~fVEINGMkLt~P~ 343 (650)
T PTZ00112 268 YILGREKEAKEIRTFLETGIKQGGTGQILYISGVPGTGKTATVYMVIKELQNKKLKGQLPWF----NLFEINGVNLVHPN 343 (650)
T ss_pred CCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCC----EEEEECCEECCCHH
T ss_conf 47770789999999998641168866569997899998003699999999999970899981----59997363779878
Q ss_pred -----------CCCCCCHHHHHHHHHHHHH-C-CCCCEEEEECCHHHHHCCCCCCCCCCCHHHHH-HHHHCCCCEEEEE-
Q ss_conf -----------6343123789999999872-0-38983999736166301554443447778888-7663026603887-
Q gi|254780163|r 274 -----------GTRYRGDFEERIKKIVKEI-E-SYANAILYIDEIHTLVGAGSASGISVDASNLL-KPALSSGAVRCIG- 338 (798)
Q Consensus 274 -----------g~~~rg~fe~r~~~~~~~~-~-~~~~~ilfideih~ligag~~~g~~~d~an~l-kP~L~rg~~~~Ig- 338 (798)
T Consensus 344 qaY~~L~e~Ltg~k~~-~~~~-A~~lL~k~F~~~r~p~VlLvDELD~LvTk---kQ-~V-lYNLFdWPT~~~SkLIVIaI 416 (650)
T PTZ00112 344 AAYRVFYKKLFNKKPP-NALN-SYKELDKLFNNNRTPSILIVDEADYIVTK---TQ-KV-LFTLFDWPTKKNSKLILIII 416 (650)
T ss_pred HHHHHHHHHHHCCCCC-CHHH-HHHHHHHHHCCCCCCEEEEECHHHHHHHC---CC-CE-EEECCCCCCCCCCEEEEEEE
T ss_conf 8999999998489888-6789-99999998268997189997157777636---77-45-77736688988870799998
Q ss_pred ECCHHHHHHHHHCCHHHHHH--CEEEEECCCCHHHHHHHHHHHHHHHHHHCCCEECCHHHHHHHHHHHHHCCCCCCHHHH
Q ss_conf 30489999985201114320--0144306878689999998612766541035121117899999865420155564679
Q gi|254780163|r 339 STTYSEYRQFFEKDKALVRR--FQKIDVSEPSIEDAIEIVKGIKPYFEEHHQLRYSKEAIRAAVQLSVRHFTSRKLPDKA 416 (798)
Q Consensus 339 atT~~ey~~~~e~d~al~rr--F~~i~v~ep~~~~~~~iL~~~~~~ye~~h~v~~~~~al~~av~ls~ryi~~r~lPdkA 416 (798)
T Consensus 417 ANTMDLPERL~---~RVsSRLGltRltF~PYt~~QL~eII~s---RL~~~--~~f~~dAIQl~ARKVAavSGD---ARRA 485 (650)
T PTZ00112 417 SNTMDLPYKMK---PSCRSRLAFGRLVFSPYKYQQIEKVIKE---RLENC--EIIDHTALQLCARRVTNYSGD---MRKA 485 (650)
T ss_pred EECCCCCHHHH---HHHHHHCCCCEECCCCCCHHHHHHHHHH---HHCCC--CCCCHHHHHHHHHHHHHHCCH---HHHH
T ss_conf 50678606566---6655522885004399899999999999---86267--778878999998888750314---8999
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHCCHH--HHHHHHCCHHHHHHHCHHHHHH-HHHHHH
Q ss_conf 8899865333321144322113657899986631024531011100112--3342100002466534589999-999998
Q gi|254780163|r 417 IDVIDEAGASQILQPLSKRRKFITEKDIKKTIASMNRSIHTTSFSRDDD--SVLSNLEKNLGTVVYGQEEAIK-KLSSSI 493 (798)
Q Consensus 417 idllDea~a~~~~~~~~~~~~~~~~~~i~~~~~~~~~gip~~~~~~~~~--~~l~~l~~~l~~~v~GQ~~ai~-~v~~~i 493 (798)
T Consensus 486 LdICR----R-AvE~--~~~~ki~~~~i~~a~n~-~~ns~~~~al~~~~~~~k~ll~~i~l~lk~~~~~ia~~~~v~~~~ 557 (650)
T PTZ00112 486 LQICK----L-AFEN--KNGGKITPRDMTRASNM-VLDSPLTNALNYLSWPFKCLLVCIILELKDVQLFIAPAKKVYNRF 557 (650)
T ss_pred HHHHH----H-HHHH--CCCCEEEHHHHHHHHHH-HHCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
T ss_conf 99999----9-9973--56873424899999888-854088999985557899999999988645010016899999999
Q ss_pred HHHHCCCCCCCCC-CCEEEEECCCCHHHHHHHHHHHHHC--CCCEEEEEHHHHH---CCCCCCHHCCCCCHHCCCC---C
Q ss_conf 7752044565787-4068861432003889999987304--7733772068861---2465301104780002564---4
Q gi|254780163|r 494 KIARAGLSDPNKP-IGCYVFSGPTGVGKTEISKQLAFAL--GVQLLRFDMSEYM---ERHAVSRLIGAPPGYVGFG---Q 564 (798)
Q Consensus 494 ~~~~~gl~~~~rP-~g~flf~GptGvGKTelak~la~~~--~~~lir~dmsey~---e~~~vs~LiGappGYvG~~---e 564 (798)
T Consensus 558 ---r-~m~~~~~~~i~~~~---~~~~fk~~l~~~~~~gii~~~p~v-f~~~s~~~k~~~~~v~~~i~~e~gd~gi~~~v~ 629 (650)
T PTZ00112 558 ---R-GMMEVLGPYIGMCS---CKESFKILLDSLVKMGIISLEPTV-FNSSSLTDKKTRVQVSPDIDEELGDMGIELNVD 629 (650)
T ss_pred ---H-HHHHHHHHHHHHCC---CHHHHHHHHHHHHHCCEEEEECEE-ECCCCCCCCCEEEECCHHHHHHCCCCCEEEEEC
T ss_conf ---9-99986146553022---488999999998756748840346-413345687414532720211304563167403
Q ss_pred CCCCCHHHHHCCCE
Q ss_conf 43100355515851
Q gi|254780163|r 565 GGILADSVDQNPYS 578 (798)
Q Consensus 565 gg~Lte~vr~~P~s 578 (798)
T Consensus 630 ~~~iital~kdp~~ 643 (650)
T PTZ00112 630 TGLIITALMKDPYW 643 (650)
T ss_pred HHHHHHHHHHCHHH
T ss_conf 54789988508557