HHsearch alignment for GI: 254780163 and conserved domain: TIGR02533
>TIGR02533 type_II_gspE general secretory pathway protein E; InterPro: IPR013369 GspE, the E protein of the type II secretion system, is also referred to as the main terminal branch of the general secretion pathway. ; GO: 0005524 ATP binding, 0008565 protein transporter activity, 0015628 protein secretion by the type II secretion system, 0015627 type II protein secretion system complex.
Probab=95.88 E-value=0.0086 Score=39.20 Aligned_cols=207 Identities=21% Similarity=0.314 Sum_probs=114.2
Q ss_pred CCCCCEEEEECCCCHHHH-HHHHHHHH--HCCCCEEEE-EHHHHHCCCCCCHHCCCCCHHCCCCCC-CC--------CC-
Q ss_conf 787406886143200388-99999873--047733772-068861246530110478000256444-31--------00-
Q gi|254780163|r 504 NKPIGCYVFSGPTGVGKT-EISKQLAF--ALGVQLLRF-DMSEYMERHAVSRLIGAPPGYVGFGQG-GI--------LA- 569 (798)
Q Consensus 504 ~rP~g~flf~GptGvGKT-elak~la~--~~~~~lir~-dmsey~e~~~vs~LiGappGYvG~~eg-g~--------Lt- 569 (798)
T Consensus 242 ~rpHGIiLVTGPTGSGKtTTLYaaL~~LN~~~~NIlTvEDPVEY~i------------------~GIgQ~Qvn~kIglTF 303 (495)
T TIGR02533 242 KRPHGIILVTGPTGSGKTTTLYAALSRLNTPERNILTVEDPVEYQI------------------EGIGQIQVNPKIGLTF 303 (495)
T ss_pred HCCCCEEEECCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCEEEEE------------------CCCCEEEECCCCCHHH
T ss_conf 1889618841778985258899999863589971568657824762------------------4876365146543038
Q ss_pred -----HHHHHCCCEEEEECCH---HHCCHHHHHHHHH--HHHHHHCC--CCCC---CEECCCCEEEEEECCCC---HHHH
Q ss_conf -----3555158517774044---5502899999999--87775021--7799---77612542999942421---4553
Q gi|254780163|r 570 -----DSVDQNPYSVVLLDEI---EKSHPDVLNILLQ--IMDYGILT--DQSG---KKISFRNVILIMTTNAG---ALEM 631 (798)
Q Consensus 570 -----e~vr~~P~sVvl~DEi---EKAh~~v~~~llq--ild~G~lt--d~~G---r~vdf~n~iii~TsN~G---~~~~ 631 (798)
T Consensus 304 A~GLRaILRQDP-DiiMvGEIRD~ETA~IAiQASLTGHLVLS--TLHTNDAAgAvtRL~DMGvEPFL~aSsl~GVLAQRL 380 (495)
T TIGR02533 304 AAGLRAILRQDP-DIIMVGEIRDLETAQIAIQASLTGHLVLS--TLHTNDAAGAVTRLIDMGVEPFLLASSLLGVLAQRL 380 (495)
T ss_pred HHHHHHHHCCCC-CEEEEECCCCHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
T ss_conf 888788642799-88998231606899999987643257655--655401544665553258640489999999998633
Q ss_pred HHCCCCCCCCCCHHHHHHHHH--HHCCHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHH-CCCE--EEECHHHH
Q ss_conf 303689882111488999998--728878817768289628899999999999999999999986-6988--99988999
Q gi|254780163|r 632 SKARIGFGSSRNDDADKEALR--NFLSPEFLNRLDSIIPFFPLSSDIIRQVVHKFIMKLELQLQE-KGIS--FHFSEEVI 706 (798)
Q Consensus 632 ~~~~~g~~~~~~~~~~~~~l~--~~f~peflnRid~ii~F~~l~~~~~~~i~~~~l~~l~~~l~~-~~i~--l~~~~~~~ 706 (798)
T Consensus 381 VRr-lCp~Cke~y~a~~~~~~~~G~~~~~~~~~nGv~~lyr~~GC~~C~~~-----G-----Y~GRtGIyElL~vDD~lr 449 (495)
T TIGR02533 381 VRR-LCPHCKEPYEATDEELALLGISKKEPKKDNGVIILYRPVGCPACNHT-----G-----YRGRTGIYELLLVDDDLR 449 (495)
T ss_pred HHH-CCCCCCCCCCCCHHHHHHCCCCHHHHCCCCCEEEEECCCCCHHHCCC-----C-----CCCCEEEEEEEEECHHHH
T ss_conf 433-15146888998979998548840210357764899778764212788-----8-----835503688674355899
Q ss_pred HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf 999971898101532679999986235999999629676888
Q gi|254780163|r 707 NWLVSHGYDVKMGARPLERIIKEHVKVPLADEILFGKLKKGG 748 (798)
Q Consensus 707 ~~l~~~~~~~~~GAR~l~r~i~~~i~~~la~~il~~~~~~g~ 748 (798)
T Consensus 450 ~lI~~~~-----~~~~i~~~a~~~GmrtlrddG~~-kv~~G~ 485 (495)
T TIGR02533 450 SLIHSRA-----DEGEIKEIARAKGMRTLRDDGLR-KVLAGI 485 (495)
T ss_pred HHHHCCC-----CHHHHHHHHHHHCCCCHHHHHHH-HHHCCC
T ss_conf 8761688-----48899999987058036899999-997178