HHsearch alignment for GI: 254780163 and conserved domain: TIGR02881
>TIGR02881 spore_V_K stage V sporulation protein K; InterPro: IPR014232 Proteins in this entry include the stage V sporulation protein K (SpoVK), a close homologue of the Rubisco expression protein CbbX (IPR000470 from INTERPRO), and are members of an ATPase family associated with various cellular activities. These proteins are strictly limited to bacterial endospore-forming species, but are not found universally among members of this group; they are missing from the Clostridium species..
Probab=97.99 E-value=0.00029 Score=49.84 Aligned_cols=171 Identities=26% Similarity=0.397 Sum_probs=123.6
Q ss_pred HHHHHHHHHHHCCCCCC---------EEEECCCCCHHHHHHHHHHHHHHCCCCCHHHHEEEEEEEEHHHHHCCCCCCCHH
Q ss_conf 99999999862267787---------489667641166899999999854898834520144554046753063431237
Q gi|254780163|r 211 EEINRTIQILCRRSKNN---------PLYVGDPGVGKTAIAEGFAKQIVDGMVPDILLGARIFSLDMGNLIAGTRYRGDF 281 (798)
Q Consensus 211 ~EI~riiqIL~RR~KNn---------~~lvG~~gvGktaive~la~~i~~~~vp~~l~~~~i~~ld~~~l~ag~~~rg~f 281 (798)
T Consensus 19 ~EiYA~i~i~~kR~~~GLk~~~~~LHMiFKGNPGTGKTTVAR~~gklf~emnv---L~KGH~iE~ERADLVG--EYIGHT 93 (261)
T TIGR02881 19 KEIYAWIQINEKRKEEGLKTSKQVLHMIFKGNPGTGKTTVARLLGKLFKEMNV---LSKGHLIEVERADLVG--EYIGHT 93 (261)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCC---CCCCCEEEEEECCCCC--CCCCCH
T ss_conf 99999999988887510114884478774278668438999999999853375---6788678876222122--320300
Q ss_pred HHHHHHHHHHHCCCCCEEEEECCHHHHHCCCCCCCCCCC----H-HHHHHHHH-CCCCEEEEEECCHHHHHHHHHCCHHH
Q ss_conf 899999998720389839997361663015544434477----7-88887663-02660388730489999985201114
Q gi|254780163|r 282 EERIKKIVKEIESYANAILYIDEIHTLVGAGSASGISVD----A-SNLLKPAL-SSGAVRCIGSTTYSEYRQFFEKDKAL 355 (798)
Q Consensus 282 e~r~~~~~~~~~~~~~~ilfideih~ligag~~~g~~~d----~-an~lkP~L-~rg~~~~IgatT~~ey~~~~e~d~al 355 (798)
T Consensus 94 AqkTRe~~kkA--~GG-vLFiDEAYSLa-----RGGEKDFGKEAIDtLVK~mEd~~~~lvlILAGY~~EM~yFL~~NPGL 165 (261)
T TIGR02881 94 AQKTREVIKKA--LGG-VLFIDEAYSLA-----RGGEKDFGKEAIDTLVKAMEDQRNELVLILAGYSDEMDYFLSLNPGL 165 (261)
T ss_pred HHHHHHHHHHH--CCC-CHHHHHHHHHH-----CCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHCCCCC
T ss_conf 48999999986--388-00557777761-----48888766208889999876156986899708768999986207797
Q ss_pred HHHCEE-EEECCCCHHHHHHHHHHHHHHHHHHCCCEECCHHHHH
Q ss_conf 320014-4306878689999998612766541035121117899
Q gi|254780163|r 356 VRRFQK-IDVSEPSIEDAIEIVKGIKPYFEEHHQLRYSKEAIRA 398 (798)
Q Consensus 356 ~rrF~~-i~v~ep~~~~~~~iL~~~~~~ye~~h~v~~~~~al~~ 398 (798)
T Consensus 166 ~SRFPi~i~FPdY~~eeL~~Ia~~m~~~Re----Y~Lt~~A~~~ 205 (261)
T TIGR02881 166 RSRFPISIDFPDYTVEELMEIAERMVKERE----YKLTEEAKWK 205 (261)
T ss_pred CCCCCCEEECCCCCHHHHHHHHHHHHHHHH----HCCCHHHHHH
T ss_conf 776650541889988899999999986464----2257889999