HHsearch alignment for GI: 254780163 and conserved domain: TIGR02903
>TIGR02903 spore_lon_C ATP-dependent protease, Lon family; InterPro: IPR014252 This entry shows some relation to the widely distributed ATP-dependent protease La, also called Lon or LonA (IPR004815 from INTERPRO), but is more closely related to LonB (IPR014251 from INTERPRO), a LonA paralog found only in endospore-forming bacteria. Proteins in this entry are unassigned peptidases belonging to the MEROPS peptidase family S16 (lon protease family, clan SJ). They are restricted to a subset of endospore-forming species, and probably participate in the program of endospore formation. We propose the designation LonC..
Probab=99.15 E-value=1.7e-09 Score=87.35 Aligned_cols=232 Identities=21% Similarity=0.289 Sum_probs=152.7
Q ss_pred HHCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHC-CCCCHHHHEEEEEEEEHHHHHC---
Q ss_conf 754861122217899999999862267787489667641166899999999854-8988345201445540467530---
Q gi|254780163|r 198 VKKGKVDILVGRHEEINRTIQILCRRSKNNPLYVGDPGVGKTAIAEGFAKQIVD-GMVPDILLGARIFSLDMGNLIA--- 273 (798)
Q Consensus 198 AreGKLDPVIGRd~EI~riiqIL~RR~KNn~~lvG~~gvGktaive~la~~i~~-~~vp~~l~~~~i~~ld~~~l~a--- 273 (798)
T Consensus 149 LRP~~f~EiVGQerAI~aLlaK~aSPfPQHiiLYGPPGVGKTTaAR-l~LEe~K~~~~tPF~~DA~FvEVDGtTLRWDPR 227 (616)
T TIGR02903 149 LRPRAFSEIVGQERAIKALLAKLASPFPQHIILYGPPGVGKTTAAR-LALEEAKKLKNTPFAEDAPFVEVDGTTLRWDPR 227 (616)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHH-HHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCC
T ss_conf 2876676433346899999976318886607855733884789999-987621368744761137857515762667741
Q ss_pred -------CC----CCCCHHHHHHHHHHHHH-----------CCCCCEEEEECCHHHHHCCCCCCCCCCCH----------
Q ss_conf -------63----43123789999999872-----------03898399973616630155444344777----------
Q gi|254780163|r 274 -------GT----RYRGDFEERIKKIVKEI-----------ESYANAILYIDEIHTLVGAGSASGISVDA---------- 321 (798)
Q Consensus 274 -------g~----~~rg~fe~r~~~~~~~~-----------~~~~~~ilfideih~ligag~~~g~~~d~---------- 321 (798)
T Consensus 228 EvTNPLLGSVHDPIYQGa-----~RDLAE~GvPEPk~GLVT~AHGG-vLFIDEI-----------GELD~lLQnKLLKVL 290 (616)
T TIGR02903 228 EVTNPLLGSVHDPIYQGA-----RRDLAETGVPEPKLGLVTDAHGG-VLFIDEI-----------GELDPLLQNKLLKVL 290 (616)
T ss_pred CCCCCCCCCCCCCCCCCC-----CHHHCCCCCCCCCCCCCCCCCCC-EEEEECH-----------HHHHHHHHHHHHHHH
T ss_conf 014776776257655676-----40110478798989871004775-6765021-----------122278763244432
Q ss_pred -------------------HHHHHHHHCCC---CEEEEEECCHHHHHHHHHCCHHHHHHCEEEEECCCCHHHHHHHHHHH
Q ss_conf -------------------88887663026---60388730489999985201114320014430687868999999861
Q gi|254780163|r 322 -------------------SNLLKPALSSG---AVRCIGSTTYSEYRQFFEKDKALVRRFQKIDVSEPSIEDAIEIVKGI 379 (798)
Q Consensus 322 -------------------an~lkP~L~rg---~~~~IgatT~~ey~~~~e~d~al~rrF~~i~v~ep~~~~~~~iL~~~ 379 (798)
T Consensus 291 EDKrV~F~SsYYDpdD~NvPkYIK~lFe~GAPADFvLIGATTr~P----~eINpALRSRCaEvfFePL~p~dI~~Iv~~A 366 (616)
T TIGR02903 291 EDKRVEFSSSYYDPDDENVPKYIKKLFEEGAPADFVLIGATTRDP----EEINPALRSRCAEVFFEPLTPEDIKEIVLNA 366 (616)
T ss_pred CCCEEEEEECCCCCCCCCCCHHHHHHHCCCCCCCEEEECCCCCCH----HHCCHHHHCCCCEEECCCCCHHHHHHHHHHH
T ss_conf 264366532124875378655888852268882568726615882----4405123301431321798878999999998
Q ss_pred HHHHHHHCCCEECCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH----HHHHHCCCCHHHHHHHHHHCCCCC
Q ss_conf 2766541035121117899999865420155564679889986533332114----432211365789998663102453
Q gi|254780163|r 380 KPYFEEHHQLRYSKEAIRAAVQLSVRHFTSRKLPDKAIDVIDEAGASQILQP----LSKRRKFITEKDIKKTIASMNRSI 455 (798)
Q Consensus 380 ~~~ye~~h~v~~~~~al~~av~ls~ryi~~r~lPdkAidllDea~a~~~~~~----~~~~~~~~~~~~i~~~~~~~~~gi 455 (798)
T Consensus 367 A~kl----nv~L~~gV~e~Ia~YT---ieGR----kAvnILAD~Yg~~ly~~~~~~~~~d~~~I~~~dv~evv~~-sRl~ 434 (616)
T TIGR02903 367 AEKL----NVKLAEGVEELIARYT---IEGR----KAVNILADVYGYALYKKAEALKEEDKVTITADDVKEVVQI-SRLS 434 (616)
T ss_pred HHHC----CCCCCCCHHHHHHHCC---CCCH----HHHHHHHHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHHHH-CCCC
T ss_conf 8861----7700036487872147---1311----2223465467676530455567777426618677767753-0457
Q ss_pred CHHHHHCC
Q ss_conf 10111001
Q gi|254780163|r 456 HTTSFSRD 463 (798)
Q Consensus 456 p~~~~~~~ 463 (798)
T Consensus 435 Py~~~~~~ 442 (616)
T TIGR02903 435 PYEKVKAS 442 (616)
T ss_pred CHHHCCCC
T ss_conf 50112468