HHsearch alignment for GI: 254780163 and conserved domain: TIGR02928
>TIGR02928 TIGR02928 orc1/cdc6 family replication initiation protein; InterPro: IPR014277 This set of DNA binding proteins shows homology to the origin recognition complex subunit 1/cell division control protein 6 family in eukaryotes. The proteins in this entry are found exclusively in the archaea. Several members may be found in a genome and interact with each other..
Probab=99.26 E-value=2.1e-09 Score=86.79 Aligned_cols=318 Identities=21% Similarity=0.265 Sum_probs=193.8
Q ss_pred HHHHHHHHHHHHHHH----HH-CCCCCCEEEECCCCCHHHHHHHHHHHHHHCC----C---CCHHHHEEEEEEEE-----
Q ss_conf 222178999999998----62-2677874896676411668999999998548----9---88345201445540-----
Q gi|254780163|r 205 ILVGRHEEINRTIQI----LC-RRSKNNPLYVGDPGVGKTAIAEGFAKQIVDG----M---VPDILLGARIFSLD----- 267 (798)
Q Consensus 205 PVIGRd~EI~riiqI----L~-RR~KNn~~lvG~~gvGktaive~la~~i~~~----~---vp~~l~~~~i~~ld----- 267 (798)
T Consensus 18 ~i~hRdeqI~~l~~~L~~~l~PG~~P~Ni~iYGkTGtGKT~vt~~v~~~l~~~~~~~d~~D~~~~~~NC~~~~T~y~~~~ 97 (383)
T TIGR02928 18 RIVHRDEQIEELAKALRPILRPGSRPSNIFIYGKTGTGKTAVTKYVMKELEEAAEDRDVRDVSTVYINCQILDTSYQVLV 97 (383)
T ss_pred CCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHH
T ss_conf 46686789999999988750674898725887888987889999999999998622699715899977854684699999
Q ss_pred -HHHHH--CCC----CCCCH-HHHHHHHHHHHHC-CCCC-EEEEECCHHHHHCCCCCCCCCCCHHHHH----HH----HH
Q ss_conf -46753--063----43123-7899999998720-3898-3999736166301554443447778888----76----63
Q gi|254780163|r 268 -MGNLI--AGT----RYRGD-FEERIKKIVKEIE-SYAN-AILYIDEIHTLVGAGSASGISVDASNLL----KP----AL 329 (798)
Q Consensus 268 -~~~l~--ag~----~~rg~-fe~r~~~~~~~~~-~~~~-~ilfideih~ligag~~~g~~~d~an~l----kP----~L 329 (798)
T Consensus 98 ~L~~~ln~~~~~~~vP~tG~s~~~~~~~l~~~l~~~~~~~~~ivLDEiD~Lv-~~~~d~P--AyS~~LY~L~Ra~~~~~~ 174 (383)
T TIGR02928 98 ELANQLNRRGSGEEVPTTGLSTSEVFRELYKELNRERGDSLIIVLDEIDKLV-RKDDDDP--AYSKLLYQLSRARENGDL 174 (383)
T ss_pred HHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCHHH-CCCCCCH--HHHHHHHHHHHHHHCCCC
T ss_conf 9999851577888898877878999999999983201887999862310221-5888880--787885343310003577
Q ss_pred CCCCEEEEEECCHHHHHHHHHCCHHHHHHCEE--EEECCCCHHHHHHHHHHHHHHH-H-HHCCCEECCHHHHHHHHHHHH
Q ss_conf 02660388730489999985201114320014--4306878689999998612766-5-410351211178999998654
Q gi|254780163|r 330 SSGAVRCIGSTTYSEYRQFFEKDKALVRRFQK--IDVSEPSIEDAIEIVKGIKPYF-E-EHHQLRYSKEAIRAAVQLSVR 405 (798)
Q Consensus 330 ~rg~~~~IgatT~~ey~~~~e~d~al~rrF~~--i~v~ep~~~~~~~iL~~~~~~y-e-~~h~v~~~~~al~~av~ls~r 405 (798)
T Consensus 175 ~~~~vgvIgISND~~f~~~L--d~RVkSsL~~eei~FpPYdA~eL~~IL~---~R~v~~AF~dGvl~d~VI~lcAA~aAq 249 (383)
T TIGR02928 175 ENAKVGVIGISNDLKFRENL--DPRVKSSLCEEEIVFPPYDAEELRDILE---NRAVEKAFYDGVLDDGVIPLCAALAAQ 249 (383)
T ss_pred CCCCEEEEEEECCCHHHHHC--CCCEECCCCCCCCEECCCCHHHHHHHHH---HHHHHHCCCCCCCCHHHHHHHHHHHHC
T ss_conf 88534899986571436445--7530132487400407988699999997---203120336885462279999998620
Q ss_pred HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHC-CCCCCHHHHHCCHHHHHHHHCCHHHHHHHCHHH
Q ss_conf 2015556467988998653333211443221136578999866310-245310111001123342100002466534589
Q gi|254780163|r 406 HFTSRKLPDKAIDVIDEAGASQILQPLSKRRKFITEKDIKKTIASM-NRSIHTTSFSRDDDSVLSNLEKNLGTVVYGQEE 484 (798)
Q Consensus 406 yi~~r~lPdkAidllDea~a~~~~~~~~~~~~~~~~~~i~~~~~~~-~~gip~~~~~~~~~~~l~~l~~~l~~~v~GQ~~ 484 (798)
T Consensus 250 ~hGD---AR~AiDLLR~AGe~A~----~~g~~~Vt~~HV~~A~e~~PE~-------------------~r~~e~~~~Lp~ 303 (383)
T TIGR02928 250 EHGD---ARKAIDLLRVAGEIAE----REGAERVTEDHVEEAQEKIPEV-------------------DRVLELIRGLPT 303 (383)
T ss_pred CCCC---HHHHHHHHHHHHHHHH----HCCCCCCHHHHHHHHHHHCCHH-------------------HHHHHHHHCCCH
T ss_conf 6787---8999999998768753----1576310088899999832228-------------------899998607986
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHHHH-HHCCCCEEEEEHHHHHCCCCCCHHCCCCCHHCCCC
Q ss_conf 99999999877520445657874068861432003889999987-30477337720688612465301104780002564
Q gi|254780163|r 485 AIKKLSSSIKIARAGLSDPNKPIGCYVFSGPTGVGKTEISKQLA-FALGVQLLRFDMSEYMERHAVSRLIGAPPGYVGFG 563 (798)
Q Consensus 485 ai~~v~~~i~~~~~gl~~~~rP~g~flf~GptGvGKTelak~la-~~~~~~lir~dmsey~e~~~vs~LiGappGYvG~~ 563 (798)
T Consensus 304 h~k~~L~A~~~l~~--~~~~~~---~~---~t~~vY-~~Y~~~c~~~~~dpl~~rR~~~~l~eL~~LG~~~~~--~~~~G 372 (383)
T TIGR02928 304 HSKLVLLAIANLAA--ESPEED---PF---RTGEVY-EVYKELCEDIGVDPLTQRRISDLLNELDMLGLVEAE--ERNKG 372 (383)
T ss_pred HHHHHHHHHHHHHH--HCCCCC---EE---EEHHHH-HHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEEE--EEECC
T ss_conf 79999999999985--167887---36---612778-999999876267766146799988767660733456--77426
Q ss_pred C-CCC
Q ss_conf 4-431
Q gi|254780163|r 564 Q-GGI 567 (798)
Q Consensus 564 e-gg~ 567 (798)
T Consensus 373 ~g~G~ 377 (383)
T TIGR02928 373 RGGGR 377 (383)
T ss_pred CCCCE
T ss_conf 77643