HHsearch alignment for GI: 254780163 and conserved domain: TIGR02928
>TIGR02928 TIGR02928 orc1/cdc6 family replication initiation protein; InterPro: IPR014277 This set of DNA binding proteins shows homology to the origin recognition complex subunit 1/cell division control protein 6 family in eukaryotes. The proteins in this entry are found exclusively in the archaea. Several members may be found in a genome and interact with each other..
Probab=98.79 E-value=3.8e-08 Score=77.72 Aligned_cols=220 Identities=18% Similarity=0.279 Sum_probs=145.9
Q ss_pred CHHHH--HHHCHHHHHHHHHHHHHHHHC-CCCCCCCCCCEEEEECCCCHHHHHHHHHHH---------HHCC-CCEEEEE
Q ss_conf 00246--653458999999999877520-445657874068861432003889999987---------3047-7337720
Q gi|254780163|r 473 KNLGT--VVYGQEEAIKKLSSSIKIARA-GLSDPNKPIGCYVFSGPTGVGKTEISKQLA---------FALG-VQLLRFD 539 (798)
Q Consensus 473 ~~l~~--~v~GQ~~ai~~v~~~i~~~~~-gl~~~~rP~g~flf~GptGvGKTelak~la---------~~~~-~~lir~d 539 (798)
T Consensus 11 dY~Pden~i~hRdeqI~~l~~~L~~~l~PG----~~P~Ni~i-YGkTGtGKT~vt~~v~~~l~~~~~~~d~~D~~~~~~N 85 (383)
T TIGR02928 11 DYVPDENRIVHRDEQIEELAKALRPILRPG----SRPSNIFI-YGKTGTGKTAVTKYVMKELEEAAEDRDVRDVSTVYIN 85 (383)
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHCCC----CCCCCEEE-ECCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEC
T ss_conf 770274246686789999999988750674----89872588-7888987889999999999998622699715899977
Q ss_pred HH----HHHCCCCCCH-H----CCCCCHHCCCCCC---CCCCHHHH-H-CCCEEEEECCHHHC---CHH---HHHHHHHH
Q ss_conf 68----8612465301-1----0478000256444---31003555-1-58517774044550---289---99999998
Q gi|254780163|r 540 MS----EYMERHAVSR-L----IGAPPGYVGFGQG---GILADSVD-Q-NPYSVVLLDEIEKS---HPD---VLNILLQI 599 (798)
Q Consensus 540 ms----ey~e~~~vs~-L----iGappGYvG~~eg---g~Lte~vr-~-~P~sVvl~DEiEKA---h~~---v~~~llqi 599 (798)
T Consensus 86 C~~~~T~y~~~~~L~~~ln~~~~~~~vP~tG~s~~~~~~~l~~~l~~~~~~~~~ivLDEiD~Lv~~~~d~PAyS~~LY~L 165 (383)
T TIGR02928 86 CQILDTSYQVLVELANQLNRRGSGEEVPTTGLSTSEVFRELYKELNRERGDSLIIVLDEIDKLVRKDDDDPAYSKLLYQL 165 (383)
T ss_pred CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHCCCCCCHHHHHHHHHH
T ss_conf 85468469999999998515778888988778789999999999832018879998623102215888880787885343
Q ss_pred HHHHHCCCCCCCEECCCCEEEEEECCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHCCHHHHCCCCEEEECCCCCHHHHHH
Q ss_conf 77750217799776125429999424214553303689882111488999998728878817768289628899999999
Q gi|254780163|r 600 MDYGILTDQSGKKISFRNVILIMTTNAGALEMSKARIGFGSSRNDDADKEALRNFLSPEFLNRLDSIIPFFPLSSDIIRQ 679 (798)
Q Consensus 600 ld~G~ltd~~Gr~vdf~n~iii~TsN~G~~~~~~~~~g~~~~~~~~~~~~~l~~~f~peflnRid~ii~F~~l~~~~~~~ 679 (798)
T Consensus 166 ~Ra----~~~~~~~~~~vgvIgISND~----------~f-----~~~Ld~RVkSsL~~-------eei~FpPYdA~eL~~ 219 (383)
T TIGR02928 166 SRA----RENGDLENAKVGVIGISNDL----------KF-----RENLDPRVKSSLCE-------EEIVFPPYDAEELRD 219 (383)
T ss_pred HHH----HHCCCCCCCCEEEEEEECCC----------HH-----HHHCCCCEECCCCC-------CCCEECCCCHHHHHH
T ss_conf 310----00357788534899986571----------43-----64457530132487-------400407988699999
Q ss_pred HHHHHH-HH-HHHHHHHCCCEEEECHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
Q ss_conf 999999-99-99999866988999889999999718981015326799999862
Q gi|254780163|r 680 VVHKFI-MK-LELQLQEKGISFHFSEEVINWLVSHGYDVKMGARPLERIIKEHV 731 (798)
Q Consensus 680 i~~~~l-~~-l~~~l~~~~i~l~~~~~~~~~l~~~~~~~~~GAR~l~r~i~~~i 731 (798)
T Consensus 220 IL~~R~v~~AF~-----dG---vl~d~VI~lcAA~aAq~hGDAR~AiDLLR~AG 265 (383)
T TIGR02928 220 ILENRAVEKAFY-----DG---VLDDGVIPLCAALAAQEHGDARKAIDLLRVAG 265 (383)
T ss_pred HHHHHHHHHCCC-----CC---CCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
T ss_conf 997203120336-----88---54622799999986206787899999999876