HHsearch alignment for GI: 254780163 and conserved domain: TIGR03015
>TIGR03015 pepcterm_ATPase putative secretion ATPase, PEP-CTERM locus subfamily. Members of this protein are marked as probable ATPases by the nucleotide binding P-loop motif GXXGXGKTT, a motif DEAQ similar to the DEAD/H box of helicases, and extensive homology to ATPases of MSHA-type pilus systems and to GspA proteins associated with type II protein secretion systems.
Probab=98.09 E-value=0.00049 Score=48.18 Aligned_cols=207 Identities=19% Similarity=0.287 Sum_probs=116.9
Q ss_pred CHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHCC-CCEEEE-------EHHHHHCCCCCCHH
Q ss_conf 4589999999998775204456578740688614320038899999873047-733772-------06886124653011
Q gi|254780163|r 481 GQEEAIKKLSSSIKIARAGLSDPNKPIGCYVFSGPTGVGKTEISKQLAFALG-VQLLRF-------DMSEYMERHAVSRL 552 (798)
Q Consensus 481 GQ~~ai~~v~~~i~~~~~gl~~~~rP~g~flf~GptGvGKTelak~la~~~~-~~lir~-------dmsey~e~~~vs~L 552 (798)
T Consensus 27 ~h~~al~~L~~~l-------~~-~~--g~~lltGe~GtGKTtllr~l~~~l~~~~~~~~~i~~~~l~~~~ll~--~i~~~ 94 (269)
T TIGR03015 27 GHKRAMAYLEYGL-------SQ-RE--GFILITGEVGAGKTTLIRNLLKRLDQERVVAAKLVNTRVDAEDLLR--MVAAD 94 (269)
T ss_pred HHHHHHHHHHHHH-------HC-CC--CEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHH--HHHHH
T ss_conf 6999999999999-------64-89--6599972998988999999998459345489997699999999999--99998
Q ss_pred CCCCCHHCCCCCCC---CCC----HHHHHCCCEEEEECCHHHCCHHHHHHHHHHHHHHHCCCCCCCEECCCCEEEEEECC
Q ss_conf 04780002564443---100----35551585177740445502899999999877750217799776125429999424
Q gi|254780163|r 553 IGAPPGYVGFGQGG---ILA----DSVDQNPYSVVLLDEIEKSHPDVLNILLQIMDYGILTDQSGKKISFRNVILIMTTN 625 (798)
Q Consensus 553 iGappGYvG~~egg---~Lt----e~vr~~P~sVvl~DEiEKAh~~v~~~llqild~G~ltd~~Gr~vdf~n~iii~TsN 625 (798)
T Consensus 95 lg~~~~~~--~~~~~~~~l~~~L~~~~~~g~~~vliIDEAq~L~~~~Le~Lr~L~n--~e~~~~~------ll~iiL~-- 162 (269)
T TIGR03015 95 FGLETEGR--DKAALLRELEDFLIEQFAAGKRALLVVDEAQNLTPELLEELRMLSN--FQTDNAK------LLQIFLV-- 162 (269)
T ss_pred CCCCCCCC--CHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHCCHHHHHHHHHHHC--CCCCCCC------CEEEEEE--
T ss_conf 59898898--9999999999999999966994699972422199999999999970--1358887------0489995--
Q ss_pred CCHHHHHHCCCCCCCCCCHHHHHHHHHHHCCHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECHHH
Q ss_conf 21455330368988211148899999872887881776828962889999999999999999999998669889998899
Q gi|254780163|r 626 AGALEMSKARIGFGSSRNDDADKEALRNFLSPEFLNRLDSIIPFFPLSSDIIRQVVHKFIMKLELQLQEKGISFHFSEEV 705 (798)
Q Consensus 626 ~G~~~~~~~~~g~~~~~~~~~~~~~l~~~f~peflnRid~ii~F~~l~~~~~~~i~~~~l~~l~~~l~~~~i~l~~~~~~ 705 (798)
T Consensus 163 -GqpeL----------------~~~L~~~~~~~l~qRI~~~~~L~pl~~eet~~YI~~RL~~A-----G~~~~~~Ft~~A 220 (269)
T TIGR03015 163 -GQPEF----------------RETLQSPQLQQLRQRIIASCHLGPLDREETREYIEHRLERA-----GNRDAPVFSEGA 220 (269)
T ss_pred -CCHHH----------------HHHHCCCCHHHHHHCEEEEEEECCCCHHHHHHHHHHHHHHC-----CCCCCCCCCHHH
T ss_conf -78679----------------99872740254555076799847999899999999999866-----999999859999
Q ss_pred HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999718981015326799999862359999996
Q gi|254780163|r 706 INWLVSHGYDVKMGARPLERIIKEHVKVPLADEIL 740 (798)
Q Consensus 706 ~~~l~~~~~~~~~GAR~l~r~i~~~i~~~la~~il 740 (798)
T Consensus 221 ~~~I~~~S-------~G~PR~IN~Lc~~aLl~a~~ 248 (269)
T TIGR03015 221 FDAIHRFS-------RGIPRLINILCDRLLLSAFL 248 (269)
T ss_pred HHHHHHHC-------CCCHHHHHHHHHHHHHHHHH
T ss_conf 99999986-------99008999999999999999