>TIGR03346 chaperone_ClpB ATP-dependent chaperone ClpB. Members of this protein family are the bacterial ATP-dependent chaperone ClpB. This protein belongs to the AAA family, ATPases associated with various cellular activities (pfam00004). This molecular chaperone does not act as a protease, but rather serves to disaggregate misfolded and aggregated proteins.

Probab=100.00 E-value=0 Score=1859.72 Aligned_cols=725 Identities=42% Similarity=0.701 Sum_probs=676.2 Q ss_pred CCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCHH--HHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCC Q ss_conf 43899999999999999828995119999999820746--8999998599989999999999641365457788867764 Q gi|254780163|r 4 FSENLEKVLHQALVLANERNHEYATLEHLLLALIDDSD--AAIVMLSCNVDLKVLKNNLLNYIDNDSSNKLKNGFRVECK 81 (798) Q Consensus 4 fS~~a~~vL~~A~~lAk~~~H~~Vt~EHLLLaLL~d~~--~~~iL~~~giD~~~Lk~~Le~~L~~~~~~~~~~~~~~ei~ 81 (798) T Consensus 1 ft~~a~~aL~~A~~~A~~~~h~~V~~eHlLlaLl~~~~~~~~~~L~~~gvd~~~l~~~l~~~l~~~~~~---~~~~~~~~ 77 (852) T TIGR03346 1 FTEKFQEALQAAQSLALGRDHQQIEPEHLLKALLDQEGGLARRLLQKAGVNVGALRQALEKELEKLPKV---SGPGGQVY 77 (852) T ss_pred CCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCC---CCCCCCCC T ss_conf 988999999999999998599902799999999739984799999985989999999999999737988---89988828 Q ss_pred CCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCC Q ss_conf 69899999999999999809981259998787873774299999998499989999999830000000111211024432 Q gi|254780163|r 82 PTSSFQRVVQRAVLHVQSTGRGIVTGANILVALFSEPDSHATYFLQEQEMTLYDAVNFISHGISKRKEFANFQSKLNVDG 161 (798) Q Consensus 82 ~S~~l~rVL~~A~~~A~~~G~~~I~~eHLLLALL~e~ds~a~~iL~~~gis~~~v~~~i~~~~~~~~~~~~~~~~~~~~~ 161 (798) T Consensus 78 ~s~~~~~vL~~A~~~a~~~~~~~I~~~hlLlall~~~~~-~~~~l~~~gi~~~~l~~~l~~~~~~~-------------- 142 (852) T TIGR03346 78 LSPELNRLLNLAEKLAQKRGDEFISSEHLLLALLDDKGT-LGKLLKEAGATADALEAAINAVRGGQ-------------- 142 (852) T ss_pred CCHHHHHHHHHHHHHHHHCCCCEECHHHHHHHHHCCCCH-HHHHHHHCCCCHHHHHHHHHHHHCCC-------------- T ss_conf 698999999999999998499977399999999709855-99999986999999999999871788-------------- Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHH Q ss_conf 10000012444444455554455303565442588775486112221789999999986226778748966764116689 Q gi|254780163|r 162 SSAGSDGEGFVNDYQAKTDLNLFPALSAYCVDLTEKVKKGKVDILVGRHEEINRTIQILCRRSKNNPLYVGDPGVGKTAI 241 (798) Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~LdkFg~DLTe~AreGKLDPVIGRd~EI~riiqIL~RR~KNn~~lvG~~gvGktai 241 (798) T Consensus 143 ------------~~~~~~~~~~~~~L~~y~~dLT~~A~~gklDpviGRd~Ei~r~i~IL~Rr~KNNpiLVGepGVGKTAI 210 (852) T TIGR03346 143 ------------KVTSANAEDQYEALEKYARDLTERAREGKLDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAI 210 (852) T ss_pred ------------CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEECCCCCCHHHH T ss_conf ------------88888875435789999888999998289997738369999999999873248972127999879999 Q ss_pred HHHHHHHHHCCCCCHHHHEEEEEEEEHHHHHCCCCCCCHHHHHHHHHHHHHCCC-CCEEEEECCHHHHHCCCCCCCCCCC Q ss_conf 999999985489883452014455404675306343123789999999872038-9839997361663015544434477 Q gi|254780163|r 242 AEGFAKQIVDGMVPDILLGARIFSLDMGNLIAGTRYRGDFEERIKKIVKEIESY-ANAILYIDEIHTLVGAGSASGISVD 320 (798) Q Consensus 242 ve~la~~i~~~~vp~~l~~~~i~~ld~~~l~ag~~~rg~fe~r~~~~~~~~~~~-~~~ilfideih~ligag~~~g~~~d 320 (798) T Consensus 211 vEGLA~rI~~g~VP~~L~~~~i~~LDlg~LvAGtkyRGeFEeRlk~ii~ev~~~~~~iILFIDEiHtliGaG~~~G-~~D 289 (852) T TIGR03346 211 VEGLAQRIVNGDVPESLKNKRLLALDMGALIAGAKYRGEFEERLKAVLNEVTKSEGQIILFIDELHTLVGAGKAEG-AMD 289 (852) T ss_pred HHHHHHHHHCCCCCHHHHHCCCEEEEHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHCCCCCCCC-CCC T ss_conf 9999999866999978851851275288775215300789999999999998589987999612555326887666-410 Q ss_pred HHHHHHHHHCCCCEEEEEECCHHHHHHHHHCCHHHHHHCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCEECCHHHHHHH Q ss_conf 78888766302660388730489999985201114320014430687868999999861276654103512111789999 Q gi|254780163|r 321 ASNLLKPALSSGAVRCIGSTTYSEYRQFFEKDKALVRRFQKIDVSEPSIEDAIEIVKGIKPYFEEHHQLRYSKEAIRAAV 400 (798) Q Consensus 321 ~an~lkP~L~rg~~~~IgatT~~ey~~~~e~d~al~rrF~~i~v~ep~~~~~~~iL~~~~~~ye~~h~v~~~~~al~~av 400 (798) T Consensus 290 AaNlLKPaLarGelr~IgATT~~EYrk~iEkD~AL~RRFq~I~V~EPs~e~t~~IL~gl~~~yE~hH~V~i~d~Ai~aav 369 (852) T TIGR03346 290 AGNMLKPALARGELHCIGATTLDEYRKYIEKDAALERRFQPVFVDEPTVEDTISILRGLKERYEVHHGVRITDPAIVAAA 369 (852) T ss_pred HHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEECHHHHHHHH T ss_conf 67774378747985599827899999883226889973771204799868999999976999976279267399999999 Q ss_pred HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH---------------------------------------------- Q ss_conf 9865420155564679889986533332114432---------------------------------------------- Q gi|254780163|r 401 QLSVRHFTSRKLPDKAIDVIDEAGASQILQPLSK---------------------------------------------- 434 (798) Q Consensus 401 ~ls~ryi~~r~lPdkAidllDea~a~~~~~~~~~---------------------------------------------- 434 (798) T Consensus 370 ~LS~RYi~~R~LPDKAIDlLDeA~a~~~~~~~~~p~~l~~~~~~~~~l~~e~~~l~~e~d~~~~~~~~~~~~~~~~l~~~ 449 (852) T TIGR03346 370 TLSHRYITDRFLPDKAIDLIDEAAARIRMEIDSKPEELDELDRRIIQLEIEREALKKEKDEASKERLEDLEKELAELEEE 449 (852) T ss_pred HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH T ss_conf 97134667788961899999999998876237894679999999999999999998443066799999999999999999 Q ss_pred --------------------------------------------------------------------------HHCCCC Q ss_conf --------------------------------------------------------------------------211365 Q gi|254780163|r 435 --------------------------------------------------------------------------RRKFIT 440 (798) Q Consensus 435 --------------------------------------------------------------------------~~~~~~ 440 (798) T Consensus 450 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~ 529 (852) T TIGR03346 450 YADLEEQWKAEKAAIQGIQQIKEEIEQVRLELEQAEREGDLAKAAELQYGKLPELEKRLQAAEAKLGEETKPRLLREEVT 529 (852) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC T ss_conf 99999999999999999999999999999889999875047777775432279999999999987641123442336679 Q ss_pred HHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHCCHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCHHH Q ss_conf 78999866310245310111001123342100002466534589999999998775204456578740688614320038 Q gi|254780163|r 441 EKDIKKTIASMNRSIHTTSFSRDDDSVLSNLEKNLGTVVYGQEEAIKKLSSSIKIARAGLSDPNKPIGCYVFSGPTGVGK 520 (798) Q Consensus 441 ~~~i~~~~~~~~~gip~~~~~~~~~~~l~~l~~~l~~~v~GQ~~ai~~v~~~i~~~~~gl~~~~rP~g~flf~GptGvGK 520 (798) T Consensus 530 ~~~ia~vvs~~t-gIPv~~~~~~e~~~L~~Le~~L~~rViGQd~AI~~I~~aI~~sraGL~dp~rP~GsFlf~GptGvGK 608 (852) T TIGR03346 530 AEEIAEVVSRWT-GIPVSKMLEGEREKLLHMEEVLHERVVGQDEAVEAVSDAIRRSRAGLSDPNRPIGSFLFLGPTGVGK 608 (852) T ss_pred HHHHHHHHHHHH-CCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCH T ss_conf 999999999996-8866766654799998788889989717099999999999999718888999745899867887768 Q ss_pred HHHHHHHH---HHCCCCEEEEEHHHHHCCCCCCHHCCCCCHHCCCCCCCCCCHHHHHCCCEEEEECCHHHCCHHHHHHHH Q ss_conf 89999987---304773377206886124653011047800025644431003555158517774044550289999999 Q gi|254780163|r 521 TEISKQLA---FALGVQLLRFDMSEYMERHAVSRLIGAPPGYVGFGQGGILADSVDQNPYSVVLLDEIEKSHPDVLNILL 597 (798) Q Consensus 521 Telak~la---~~~~~~lir~dmsey~e~~~vs~LiGappGYvG~~egg~Lte~vr~~P~sVvl~DEiEKAh~~v~~~ll 597 (798) T Consensus 609 TELAKaLAe~Lfg~~~~LIriDMSEy~E~hsvsrLiGaPPGYVGy~egG~Lte~vr~~PysVvL~DEIEKAh~~V~~~lL 688 (852) T TIGR03346 609 TELAKALAEFLFDDEDAMVRIDMSEYMEKHSVARLIGAPPGYVGYEEGGQLTEAVRRKPYSVVLFDEVEKAHPDVFNVLL 688 (852) T ss_pred HHHHHHHHHHHHCCCCCEEEECHHHHCCHHHHHHHCCCCCCCCCCCCCCEECHHHHHCCCEEEEECCHHHHCHHHHHHHH T ss_conf 99999999998558520698430443012247785589997677687874239898198879985305430768999999 Q ss_pred HHHHHHHCCCCCCCEECCCCEEEEEECCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHCCHHHHCCCCEEEECCCCCHHHH Q ss_conf 98777502177997761254299994242145533036898821114889999987288788177682896288999999 Q gi|254780163|r 598 QIMDYGILTDQSGKKISFRNVILIMTTNAGALEMSKARIGFGSSRNDDADKEALRNFLSPEFLNRLDSIIPFFPLSSDII 677 (798) Q Consensus 598 qild~G~ltd~~Gr~vdf~n~iii~TsN~G~~~~~~~~~g~~~~~~~~~~~~~l~~~f~peflnRid~ii~F~~l~~~~~ 677 (798) T Consensus 689 QilD~G~ltD~~Gr~vdF~NtiiimTSN~Ga~~i~~~~~~~~~~~~~~~~~~~~~~~F~PEflnRid~ii~F~~L~~~~l 768 (852) T TIGR03346 689 QVLDDGRLTDGQGRTVDFRNTVIIMTSNLGSQFIQELAGGDDYEEMREAVMEVLRAHFRPEFLNRIDEIVVFHPLGREQI 768 (852) T ss_pred HHHCCCEEECCCCCEEEEEEEEEEEECCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHCCEEEEECCCCHHHH T ss_conf 88236743079998885355689861540659997411455579999999999996589989963786898378999999 Q ss_pred HHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEC Q ss_conf 99999999999999986698899988999999971898101532679999986235999999629676888489999607 Q gi|254780163|r 678 RQVVHKFIMKLELQLQEKGISFHFSEEVINWLVSHGYDVKMGARPLERIIKEHVKVPLADEILFGKLKKGGGVVKVSLNP 757 (798) Q Consensus 678 ~~i~~~~l~~l~~~l~~~~i~l~~~~~~~~~l~~~~~~~~~GAR~l~r~i~~~i~~~la~~il~~~~~~g~~~~~v~~~~ 757 (798) T Consensus 769 ~~I~~~~l~~l~~~l~~~~i~l~~~~~~~~~l~~~g~~~~~GAR~l~r~i~~~i~~~la~~iL~g~~~~g~~-v~v~~~~ 847 (852) T TIGR03346 769 ARIVEIQLGRLRKRLAERKITLELSDAALDFLAEAGYDPVYGARPLKRAIQREIENPLAKKILAGEVADGDT-IVVDVEG 847 (852) T ss_pred HHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCE-EEEEEEC T ss_conf 999999999999999977984998889999999848897747156999999998899999997488899598-9999779 Q ss_pred CCCC Q ss_conf 8665 Q gi|254780163|r 758 DKSA 761 (798) Q Consensus 758 ~~~~ 761 (798) T Consensus 848 ~~~~ 851 (852) T TIGR03346 848 GRLV 851 (852) T ss_pred CEEE T ss_conf 9975

HHsearch alignment for GI: 254780163 and conserved domain: TIGR03346