HHsearch alignment for GI: 254780163 and conserved domain: cd03227

>cd03227 ABC_Class2 ABC-type Class 2 contains systems involved in cellular processes other than transport. These families are characterised by the fact that the ABC subunit is made up of duplicated, fused ABC modules (ABC2). No known transmembrane proteins or domains are associated with these proteins.
Probab=96.05  E-value=0.077  Score=32.39  Aligned_cols=110  Identities=17%  Similarity=0.191  Sum_probs=49.5

Q ss_pred             EEEECCCCCHHHHHHHHHHHHHHCCC----CCHHH-------HEEEEEEEEHHHHHCCCCCCCHHHH-HHHHHHHHHCCC
Q ss_conf             48966764116689999999985489----88345-------2014455404675306343123789-999999872038
Q gi|254780163|r  228 PLYVGDPGVGKTAIAEGFAKQIVDGM----VPDIL-------LGARIFSLDMGNLIAGTRYRGDFEE-RIKKIVKEIESY  295 (798)
Q Consensus       228 ~~lvG~~gvGktaive~la~~i~~~~----vp~~l-------~~~~i~~ld~~~l~ag~~~rg~fe~-r~~~~~~~~~~~  295 (798)
T Consensus        24 ~iItGpN~sGKSt~Lr~i~l~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-Sg----g~~~~~~l~~~l~~~~~~   98 (162)
T cd03227          24 TIITGPNGSGKSTILDAIGLALGGAQSATRRRSGVKAGCIVAAVSAELIFTRLQL-SG----GEKELSALALILALASLK   98 (162)
T ss_pred             EEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCHHHEEEEEECCCCC-CC----CHHHHHHHHHHHHHCCCC
T ss_conf             9998998775799999999999986326775255542776402305766412000-54----299999999999854248


Q ss_pred             CCEEEEECCHHHHHCCCCCCCCCCCHHHHHHHHHCCCCEEEEEECCHHHHHH
Q ss_conf             9839997361663015544434477788887663026603887304899999
Q gi|254780163|r  296 ANAILYIDEIHTLVGAGSASGISVDASNLLKPALSSGAVRCIGSTTYSEYRQ  347 (798)
Q Consensus       296 ~~~ilfideih~ligag~~~g~~~d~an~lkP~L~rg~~~~IgatT~~ey~~  347 (798)
T Consensus        99 ~~~lillDE~----~~Gtd~~~~~~l~~~i~~~~~~~-~~~i~tTH~~eL~~  145 (162)
T cd03227          99 PRPLYILDEI----DRGLDPRDGQALAEAILEHLVKG-AQVIVITHLPELAE  145 (162)
T ss_pred             CCCEEEECCC----CCCCCHHHHHHHHHHHHHHHHCC-CEEEEECCHHHHHH
T ss_conf             9848996365----57999889999999999999769-98999797399999