HHsearch alignment for GI: 254780163 and conserved domain: pfam00308

Probab=98.72  E-value=3.6e-07  Score=70.71  Aligned_cols=159  Identities=16%  Similarity=0.267  Sum_probs=66.4

Q ss_pred             CCCCEEEEECCCCHHHHHHHHHHHH-----HCCCCEEEEEHHHHHCCCCCCHHCCCCCHHCCCCCCCCCCHHHHHCCCEE
Q ss_conf             8740688614320038899999873-----04773377206886124653011047800025644431003555158517
Q gi|254780163|r  505 KPIGCYVFSGPTGVGKTEISKQLAF-----ALGVQLLRFDMSEYMERHAVSRLIGAPPGYVGFGQGGILADSVDQNPYSV  579 (798)
Q Consensus       505 rP~g~flf~GptGvGKTelak~la~-----~~~~~lir~dmsey~e~~~vs~LiGappGYvG~~egg~Lte~vr~~P~sV  579 (798)
T Consensus        32 ~~~npl~i~G~~G~GKTHLLqA~~~~~~~~~~~~~v~yl~~~~~~~~-~~~~l~~~--------~~~~f~~~l--~~~d~  100 (219)
T pfam00308        32 KAYNPLFIYGGVGLGKTHLLHAIGNYALRNFPNLRVVYLTSEEFLND-FVDALRDN--------KIEAFKKSY--RNVDL  100 (219)
T ss_pred             CCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHH-HHHHHHCC--------CHHHHHHHH--HHCCH
T ss_conf             76782699889999888999999999998499982888439999998-89999818--------888999997--63233


Q ss_pred             EEECCHHHC--CHHHHHHHHHHHHHHHCCCCCCCEECCCCEEEEEECCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHCCH
Q ss_conf             774044550--289999999987775021779977612542999942421455330368988211148899999872887
Q gi|254780163|r  580 VLLDEIEKS--HPDVLNILLQIMDYGILTDQSGKKISFRNVILIMTTNAGALEMSKARIGFGSSRNDDADKEALRNFLSP  657 (798)
Q Consensus       580 vl~DEiEKA--h~~v~~~llqild~G~ltd~~Gr~vdf~n~iii~TsN~G~~~~~~~~~g~~~~~~~~~~~~~l~~~f~p  657 (798)
T Consensus       101 l~iDDi~~l~~~~~~ee~lf~l~N~--~~~~~~--------~lllts~~~p~~l---------------------~~~~~  149 (219)
T pfam00308       101 LLIDDIQFLAGKEKTQEEFFHTFNA--LHENNK--------QIVLTSDRPPKEL---------------------EGFED  149 (219)
T ss_pred             HHHCCHHHHCCCHHHHHHHHHHHHH--HHHCCC--------EEEEECCCCCCCC---------------------CCCCH
T ss_conf             6522367656864789999999999--997298--------6999779981002---------------------45327


Q ss_pred             HHHCCC--CEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHCCC
Q ss_conf             881776--828962889999999999999999999998669889998899999997189
Q gi|254780163|r  658 EFLNRL--DSIIPFFPLSSDIIRQVVHKFIMKLELQLQEKGISFHFSEEVINWLVSHGY  714 (798)
Q Consensus       658 eflnRi--d~ii~F~~l~~~~~~~i~~~~l~~l~~~l~~~~i~l~~~~~~~~~l~~~~~  714 (798)
T Consensus       150 dL~SRL~~g~~~~i~~pdd~~~~~iL~~~a-------~~r~l~--l~~~v~~yl~~r~~  199 (219)
T pfam00308       150 RLRSRFEWGLIIAIEPPDLETRLAILRKKA-------EEENIN--IPNEVLNFIAQRIT  199 (219)
T ss_pred             HHHHHHHCCEEEECCCCCHHHHHHHHHHHH-------HHCCCC--CCHHHHHHHHHHCC
T ss_conf             799998687566116999999999999999-------984999--99999999998427