HHsearch alignment for GI: 254780163 and conserved domain: pfam00931
>pfam00931 NB-ARC NB-ARC domain.
Probab=97.09 E-value=0.01 Score=38.71 Aligned_cols=149 Identities=19% Similarity=0.153 Sum_probs=78.3
Q ss_pred HHHHHHHHHHHHHCCCCCC--EEEECCCCCHHHHHHHHHHHHHHCCCCCHHHHEEEEEEE-----EHHHH-------HC-
Q ss_conf 7899999999862267787--489667641166899999999854898834520144554-----04675-------30-
Q gi|254780163|r 209 RHEEINRTIQILCRRSKNN--PLYVGDPGVGKTAIAEGFAKQIVDGMVPDILLGARIFSL-----DMGNL-------IA- 273 (798)
Q Consensus 209 Rd~EI~riiqIL~RR~KNn--~~lvG~~gvGktaive~la~~i~~~~vp~~l~~~~i~~l-----d~~~l-------~a- 273 (798)
T Consensus 1 r~~~~~~i~~~L~~~~~~~~vI~I~G~gGiGKTtLA~~v~~~~---~i~~~F-~~~~wv~vs~~~~~~~i~~~i~~~l~~ 76 (285)
T pfam00931 1 REDMIEALIEKLLEMSENLGVVGIVGMGGVGKTTLAKQIYNDD---SVGGHF-DSVAWVVVSKTYTEFRLQKDILQELGL 76 (285)
T ss_pred CHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHCCH---HHHHCC-CEEEEEEECCCCCHHHHHHHHHHHHCC
T ss_conf 9689999999986489895399988999563999999997165---565059-838999979766689999999998566
Q ss_pred --CCCCCCHHHHHHHHHHHHHCCCCCEEEEECCHHHHHCCCCCCCCCCCHHHHHHHHHCCC-CEEEEEECCHHHHHHHHH
Q ss_conf --63431237899999998720389839997361663015544434477788887663026-603887304899999852
Q gi|254780163|r 274 --GTRYRGDFEERIKKIVKEIESYANAILYIDEIHTLVGAGSASGISVDASNLLKPALSSG-AVRCIGSTTYSEYRQFFE 350 (798)
Q Consensus 274 --g~~~rg~fe~r~~~~~~~~~~~~~~ilfideih~ligag~~~g~~~d~an~lkP~L~rg-~~~~IgatT~~ey~~~~e 350 (798)
T Consensus 77 ~~~~~~~~~~~~l~~~l~~~L~-~kr~LiVLDDVw~~----------~~~~~l~~~~~~~~~gSrIIvTTR~~~V~~~-- 143 (285)
T pfam00931 77 DDSDWVEKNESELAVKIKEALL-RKRFLLVLDDVWEK----------NDWDKIGVPFPDGENGSRVIVTTRSESVAGR-- 143 (285)
T ss_pred CCCCCCCCCHHHHHHHHHHHHC-CCCEEEEECCCCCH----------HHHHHHHCCCCCCCCCCEEEEECCCHHHHHH--
T ss_conf 6545555789999999999972-79669996388878----------9999973457578998279985575899987--
Q ss_pred CCHHHHHHCEEEEECCCCHHHHHHHHHH
Q ss_conf 0111432001443068786899999986
Q gi|254780163|r 351 KDKALVRRFQKIDVSEPSIEDAIEIVKG 378 (798)
Q Consensus 351 ~d~al~rrF~~i~v~ep~~~~~~~iL~~ 378 (798)
T Consensus 144 ----~~~~~~~~~l~~L~~~es~~Lf~~ 167 (285)
T pfam00931 144 ----MGGTSKPHEVESLEPEESWELFSN 167 (285)
T ss_pred ----CCCCCCEEECCCCCHHHHHHHHHH
T ss_conf ----378883476168987999999999