HHsearch alignment for GI: 254780163 and conserved domain: pfam03969
>pfam03969 AFG1_ATPase AFG1-like ATPase. This family of proteins contains a P-loop motif and are predicted to be ATPases.
Probab=97.19 E-value=0.0031 Score=42.40 Aligned_cols=96 Identities=17% Similarity=0.274 Sum_probs=49.2
Q ss_pred CEEEECCCCCHHHHHHHHHHHHHHCCCCCHHHHEEEEE----EEEHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCEEEEE
Q ss_conf 74896676411668999999998548988345201445----54046753063431237899999998720389839997
Q gi|254780163|r 227 NPLYVGDPGVGKTAIAEGFAKQIVDGMVPDILLGARIF----SLDMGNLIAGTRYRGDFEERIKKIVKEIESYANAILYI 302 (798)
Q Consensus 227 n~~lvG~~gvGktaive~la~~i~~~~vp~~l~~~~i~----~ld~~~l~ag~~~rg~fe~r~~~~~~~~~~~~~~ilfi 302 (798)
T Consensus 63 GlYl~G~VGrGKTmLMDlFy~~lp~~------~K~R~HFh~FM~~vH~~l~--~~~~~-~dpl~~va~~l~~~~-~lLCf 132 (361)
T pfam03969 63 GLYLWGGVGRGKTHLMDSFFESLPGE------RKRRTHFHRFMFRVHDELT--TLQGG-DDPLPIAADRFANEA-RLLCF 132 (361)
T ss_pred EEEEECCCCCCHHHHHHHHHHHCCCC------CCCCCCHHHHHHHHHHHHH--HHHCC-CCCHHHHHHHHHHCC-CEEEE
T ss_conf 68988998886999999999867753------4445667899999999999--97667-763899999997258-77997
Q ss_pred CCHHHHHCCCCCCCCCCCHHHHHHHHHCCCCEEEEE
Q ss_conf 361663015544434477788887663026603887
Q gi|254780163|r 303 DEIHTLVGAGSASGISVDASNLLKPALSSGAVRCIG 338 (798)
Q Consensus 303 deih~ligag~~~g~~~d~an~lkP~L~rg~~~~Ig 338 (798)
T Consensus 133 DEFqV~-----DIaDAMIL~rLf~~Lf~~g-vvlV~ 162 (361)
T pfam03969 133 DEFEVD-----DIGDAMILGRLFEALFARG-VSLVA 162 (361)
T ss_pred EEEEEC-----CHHHHHHHHHHHHHHHHCC-CEEEE
T ss_conf 635616-----7888999999999999779-78998