HHsearch alignment for GI: 254780163 and conserved domain: pfam05729
>pfam05729 NACHT NACHT domain. This NTPase domain is found in apoptosis proteins as well as those involved in MHC transcription activation. This family is closely related to pfam00931.
Probab=97.62 E-value=0.0079 Score=39.48 Aligned_cols=140 Identities=19% Similarity=0.226 Sum_probs=74.1
Q ss_pred EEEECCCCCHHHHHHHHHHHHHHCCCCCHHHHEEEEEEEEHHHHHCCCCCCCHHHHHH-----------HHHHHHH-CCC
Q ss_conf 4896676411668999999998548988345201445540467530634312378999-----------9999872-038
Q gi|254780163|r 228 PLYVGDPGVGKTAIAEGFAKQIVDGMVPDILLGARIFSLDMGNLIAGTRYRGDFEERI-----------KKIVKEI-ESY 295 (798)
Q Consensus 228 ~~lvG~~gvGktaive~la~~i~~~~vp~~l~~~~i~~ld~~~l~ag~~~rg~fe~r~-----------~~~~~~~-~~~ 295 (798)
T Consensus 3 i~i~G~aG~GKTtll~kl~~~wa~g~~~~~~--~~vf~~~~r~~~~-~~~~-sl~~ll~~~~~~~~~~~~~~~~~~~~~~ 78 (165)
T pfam05729 3 VILQGEAGSGKTTLLQKLALLWAQGKLPQDF--DFVFFLPCRELSR-SGEA-SLADLLFSQWPEPAAPVSEVWAVILELP 78 (165)
T ss_pred EEEECCCCCCHHHHHHHHHHHHHCCCCCCCC--CEEEEEEHHHHCC-CCCC-CHHHHHHHHCCCCCCCHHHHHHHHHHCC
T ss_conf 9998279898999999999999869843697--2899999567077-7668-9999999876774576378999998397
Q ss_pred CCEEEEECCHHHHHCCCCCCCCCCC----HHHHHHHHHCCCCEEEEEECCHHHHHHHHHCCHHHHHHCEEEEECCCCHHH
Q ss_conf 9839997361663015544434477----788887663026603887304899999852011143200144306878689
Q gi|254780163|r 296 ANAILYIDEIHTLVGAGSASGISVD----ASNLLKPALSSGAVRCIGSTTYSEYRQFFEKDKALVRRFQKIDVSEPSIED 371 (798)
Q Consensus 296 ~~~ilfideih~ligag~~~g~~~d----~an~lkP~L~rg~~~~IgatT~~ey~~~~e~d~al~rrF~~i~v~ep~~~~ 371 (798)
T Consensus 79 ~k~L~ilDGlDE~~~~~~~~~~~~~~~~~l~~ll~~~~lp~-~~vliTsRp~~~~~----l~~~~~~~~~~ei~GFs~~~ 153 (165)
T pfam05729 79 ERVLLILDGLDELASDLGQLDGPLPVLTLLSSLLRKKLLPG-ASLLLTSRPDALRD----LRRGLEEPRYLEVLGFSEED 153 (165)
T ss_pred CCEEEEECCHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCC-CEEEEEECCCHHHH----HHHHCCCCCEEEECCCCHHH
T ss_conf 72899964845514443564445779999999984152788-64999968037988----57764887189988999999
Q ss_pred HHHHH
Q ss_conf 99999
Q gi|254780163|r 372 AIEIV 376 (798)
Q Consensus 372 ~~~iL 376 (798)
T Consensus 154 ~~~yi 158 (165)
T pfam05729 154 RKQYV 158 (165)
T ss_pred HHHHH
T ss_conf 99999