HHsearch alignment for GI: 254780163 and conserved domain: pfam05729

>pfam05729 NACHT NACHT domain. This NTPase domain is found in apoptosis proteins as well as those involved in MHC transcription activation. This family is closely related to pfam00931.
Probab=97.62  E-value=0.0079  Score=39.48  Aligned_cols=140  Identities=19%  Similarity=0.226  Sum_probs=74.1

Q ss_pred             EEEECCCCCHHHHHHHHHHHHHHCCCCCHHHHEEEEEEEEHHHHHCCCCCCCHHHHHH-----------HHHHHHH-CCC
Q ss_conf             4896676411668999999998548988345201445540467530634312378999-----------9999872-038
Q gi|254780163|r  228 PLYVGDPGVGKTAIAEGFAKQIVDGMVPDILLGARIFSLDMGNLIAGTRYRGDFEERI-----------KKIVKEI-ESY  295 (798)
Q Consensus       228 ~~lvG~~gvGktaive~la~~i~~~~vp~~l~~~~i~~ld~~~l~ag~~~rg~fe~r~-----------~~~~~~~-~~~  295 (798)
T Consensus         3 i~i~G~aG~GKTtll~kl~~~wa~g~~~~~~--~~vf~~~~r~~~~-~~~~-sl~~ll~~~~~~~~~~~~~~~~~~~~~~   78 (165)
T pfam05729         3 VILQGEAGSGKTTLLQKLALLWAQGKLPQDF--DFVFFLPCRELSR-SGEA-SLADLLFSQWPEPAAPVSEVWAVILELP   78 (165)
T ss_pred             EEEECCCCCCHHHHHHHHHHHHHCCCCCCCC--CEEEEEEHHHHCC-CCCC-CHHHHHHHHCCCCCCCHHHHHHHHHHCC
T ss_conf             9998279898999999999999869843697--2899999567077-7668-9999999876774576378999998397


Q ss_pred             CCEEEEECCHHHHHCCCCCCCCCCC----HHHHHHHHHCCCCEEEEEECCHHHHHHHHHCCHHHHHHCEEEEECCCCHHH
Q ss_conf             9839997361663015544434477----788887663026603887304899999852011143200144306878689
Q gi|254780163|r  296 ANAILYIDEIHTLVGAGSASGISVD----ASNLLKPALSSGAVRCIGSTTYSEYRQFFEKDKALVRRFQKIDVSEPSIED  371 (798)
Q Consensus       296 ~~~ilfideih~ligag~~~g~~~d----~an~lkP~L~rg~~~~IgatT~~ey~~~~e~d~al~rrF~~i~v~ep~~~~  371 (798)
T Consensus        79 ~k~L~ilDGlDE~~~~~~~~~~~~~~~~~l~~ll~~~~lp~-~~vliTsRp~~~~~----l~~~~~~~~~~ei~GFs~~~  153 (165)
T pfam05729        79 ERVLLILDGLDELASDLGQLDGPLPVLTLLSSLLRKKLLPG-ASLLLTSRPDALRD----LRRGLEEPRYLEVLGFSEED  153 (165)
T ss_pred             CCEEEEECCHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCC-CEEEEEECCCHHHH----HHHHCCCCCEEEECCCCHHH
T ss_conf             72899964845514443564445779999999984152788-64999968037988----57764887189988999999


Q ss_pred             HHHHH
Q ss_conf             99999
Q gi|254780163|r  372 AIEIV  376 (798)
Q Consensus       372 ~~~iL  376 (798)
T Consensus       154 ~~~yi  158 (165)
T pfam05729       154 RKQYV  158 (165)
T ss_pred             HHHHH
T ss_conf             99999