HHsearch alignment for GI: 254780163 and conserved domain: pfam07728
>pfam07728 AAA_5 AAA domain (dynein-related subfamily). This Pfam entry includes some of the AAA proteins not detected by the pfam00004 model.
Probab=99.57 E-value=5.4e-15 Score=126.93 Aligned_cols=112 Identities=29% Similarity=0.479 Sum_probs=87.5
Q ss_pred EEEECCCCHHHHHHHHHHHHHC-CCCEEEEEHHHHHCCCCCCHHCCCC---CHHCCCCCCCCCCHHHHHCCCEEEEECCH
Q ss_conf 8861432003889999987304-7733772068861246530110478---00025644431003555158517774044
Q gi|254780163|r 510 YVFSGPTGVGKTEISKQLAFAL-GVQLLRFDMSEYMERHAVSRLIGAP---PGYVGFGQGGILADSVDQNPYSVVLLDEI 585 (798)
Q Consensus 510 flf~GptGvGKTelak~la~~~-~~~lir~dmsey~e~~~vs~LiGap---pGYvG~~egg~Lte~vr~~P~sVvl~DEi 585 (798)
T Consensus 2 vll~Gp~G~GKT~la~~la~~l~~~~~~~i~~~~~~~~---~dl~G~~~~~~~~~~~~-~g~l~~a~~~g--~vl~lDEi 75 (139)
T pfam07728 2 VLLVGPPGTGKSELAERLAAALSNRPVFYVQLTRDTTE---EDLKGRRNIANGTTSWV-DGPLVRAAREG--EIAVLDEI 75 (139)
T ss_pred EEEECCCCCHHHHHHHHHHHHCCCCCCHHHCCCCCCCH---HHCCCCEECCCCCEEEE-CCHHHCCCCCC--CEEEECCH
T ss_conf 89998997569999999999807983111214655652---22057342379935781-55141010128--68996343
Q ss_pred HHCCHHHHHHHHHHHHHHHCCC-CCCCEECC------CCEEEEEECCCC
Q ss_conf 5502899999999877750217-79977612------542999942421
Q gi|254780163|r 586 EKSHPDVLNILLQIMDYGILTD-QSGKKISF------RNVILIMTTNAG 627 (798)
Q Consensus 586 EKAh~~v~~~llqild~G~ltd-~~Gr~vdf------~n~iii~TsN~G 627 (798)
T Consensus 76 n~a~~~v~~~L~~~le~~~~~~~~~~~~~~~~~~~~~~~f~viaT~N~~ 124 (139)
T pfam07728 76 NRANPDVLNSLLSLLDERRLLLPEGGELVKVAPDDFAKRFRLIATMNPL 124 (139)
T ss_pred HHCCHHHHHHHHHHHCCCEEEECCCCEEECCCCCCCCCCEEEEEEECCC
T ss_conf 4489999999999974896983689727336666789996999975896