HHsearch alignment for GI: 254780163 and conserved domain: pfam07728

>pfam07728 AAA_5 AAA domain (dynein-related subfamily). This Pfam entry includes some of the AAA proteins not detected by the pfam00004 model.
Probab=98.64  E-value=2.7e-08  Score=78.72  Aligned_cols=116  Identities=24%  Similarity=0.267  Sum_probs=65.5

Q ss_pred             CEEEECCCCCHHHHHHHHHHHHHHCCCCCHHHHEEEEEEEEHHHHHCCCCC---CCHHHHHHHHHHHHHCCCCCEEEEEC
Q ss_conf             748966764116689999999985489883452014455404675306343---12378999999987203898399973
Q gi|254780163|r  227 NPLYVGDPGVGKTAIAEGFAKQIVDGMVPDILLGARIFSLDMGNLIAGTRY---RGDFEERIKKIVKEIESYANAILYID  303 (798)
Q Consensus       227 n~~lvG~~gvGktaive~la~~i~~~~vp~~l~~~~i~~ld~~~l~ag~~~---rg~fe~r~~~~~~~~~~~~~~ilfid  303 (798)
T Consensus         1 ~vll~Gp~G~GKT~la~~la~~l~~~~~--~~i~~~-~~~~~~dl~G~~~~~~~~~~~~~---g~l~~a~~~g-~vl~lD   73 (139)
T pfam07728         1 GVLLVGPPGTGKSELAERLAAALSNRPV--FYVQLT-RDTTEEDLKGRRNIANGTTSWVD---GPLVRAAREG-EIAVLD   73 (139)
T ss_pred             CEEEECCCCCHHHHHHHHHHHHCCCCCC--HHHCCC-CCCCHHHCCCCEECCCCCEEEEC---CHHHCCCCCC-CEEEEC
T ss_conf             9899989975699999999998079831--112146-55652220573423799357815---5141010128-689963


Q ss_pred             CHHHHHCCCCCCCCCCCHHHHHHHHHCCCC--------------------EEEEEECCHHHHHHHHHCCHHHHHHC
Q ss_conf             616630155444344777888876630266--------------------03887304899999852011143200
Q gi|254780163|r  304 EIHTLVGAGSASGISVDASNLLKPALSSGA--------------------VRCIGSTTYSEYRQFFEKDKALVRRF  359 (798)
Q Consensus       304 eih~ligag~~~g~~~d~an~lkP~L~rg~--------------------~~~IgatT~~ey~~~~e~d~al~rrF  359 (798)
T Consensus        74 Ein~a---------~~~v~~~L~~~le~~~~~~~~~~~~~~~~~~~~~~~f~viaT~N~~-~~g~~~l~~Al~~RF  139 (139)
T pfam07728        74 EINRA---------NPDVLNSLLSLLDERRLLLPEGGELVKVAPDDFAKRFRLIATMNPL-DRGLNELSPALRSRF  139 (139)
T ss_pred             CHHHC---------CHHHHHHHHHHHCCCEEEECCCCEEECCCCCCCCCCEEEEEEECCC-CCCCCCCCHHHHCCC
T ss_conf             43448---------9999999999974896983689727336666789996999975896-547800998997509