HHsearch alignment for GI: 254780163 and conserved domain: smart00382

>smart00382 AAA ATPases associated with a variety of cellular activities. AAA - ATPases associated with a variety of cellular activities. This profile/alignment only detects a fraction of this vast family. The poorly conserved N-terminal helix is missing from the alignment.
Probab=98.37  E-value=3.6e-06  Score=63.46  Aligned_cols=126  Identities=23%  Similarity=0.266  Sum_probs=76.0

Q ss_pred             CCCEEEECCCCCHHHHHHHHHHHHHHCCCCCHHHHEEEEEEEEHHHHHCCCCC------------CCHHHHHHHHHHHHH
Q ss_conf             78748966764116689999999985489883452014455404675306343------------123789999999872
Q gi|254780163|r  225 KNNPLYVGDPGVGKTAIAEGFAKQIVDGMVPDILLGARIFSLDMGNLIAGTRY------------RGDFEERIKKIVKEI  292 (798)
Q Consensus       225 KNn~~lvG~~gvGktaive~la~~i~~~~vp~~l~~~~i~~ld~~~l~ag~~~------------rg~fe~r~~~~~~~~  292 (798)
T Consensus         2 ~~~ill~G~~GsGKTtl~~~la~~~~~~~-------~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   74 (148)
T smart00382        2 GEVILIVGPPGSGKTTLARALARELGPPG-------GGVIYIDGEDILEEVLDQLLLIIVGGKKASGSGELRLRLALALA   74 (148)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHHHCCCC-------CCEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
T ss_conf             97899999997029999999998726689-------96899875998988898765300011221051999999999999


Q ss_pred             CCCCCEEEEECCHHHHHCCCCCCCCC-CCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHCCHHHHHHCEE
Q ss_conf             03898399973616630155444344-7778888766302660388730489999985201114320014
Q gi|254780163|r  293 ESYANAILYIDEIHTLVGAGSASGIS-VDASNLLKPALSSGAVRCIGSTTYSEYRQFFEKDKALVRRFQK  361 (798)
Q Consensus       293 ~~~~~~ilfideih~ligag~~~g~~-~d~an~lkP~L~rg~~~~IgatT~~ey~~~~e~d~al~rrF~~  361 (798)
T Consensus        75 ~~~~~~viiiDei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~n~----~~~~~~~~~~~~~~~  140 (148)
T smart00382       75 RKLKPDVLILDEITSLLDAEQEALLLLLEELRLLLLLKSEKNLTVILTTND----EKDLGPALLRRRFDR  140 (148)
T ss_pred             HHCCCCEEEEECCHHHCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEECC----CCCCCHHHHCCCCCE
T ss_conf             844998999827502147620799999999998517657899899995699----522498770744787