HHsearch alignment for GI: 254780163 and conserved domain: smart00382
>smart00382 AAA ATPases associated with a variety of cellular activities. AAA - ATPases associated with a variety of cellular activities. This profile/alignment only detects a fraction of this vast family. The poorly conserved N-terminal helix is missing from the alignment.
Probab=98.37 E-value=3.6e-06 Score=63.46 Aligned_cols=126 Identities=23% Similarity=0.266 Sum_probs=76.0
Q ss_pred CCCEEEECCCCCHHHHHHHHHHHHHHCCCCCHHHHEEEEEEEEHHHHHCCCCC------------CCHHHHHHHHHHHHH
Q ss_conf 78748966764116689999999985489883452014455404675306343------------123789999999872
Q gi|254780163|r 225 KNNPLYVGDPGVGKTAIAEGFAKQIVDGMVPDILLGARIFSLDMGNLIAGTRY------------RGDFEERIKKIVKEI 292 (798)
Q Consensus 225 KNn~~lvG~~gvGktaive~la~~i~~~~vp~~l~~~~i~~ld~~~l~ag~~~------------rg~fe~r~~~~~~~~ 292 (798)
T Consensus 2 ~~~ill~G~~GsGKTtl~~~la~~~~~~~-------~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (148)
T smart00382 2 GEVILIVGPPGSGKTTLARALARELGPPG-------GGVIYIDGEDILEEVLDQLLLIIVGGKKASGSGELRLRLALALA 74 (148)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHHHCCCC-------CCEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
T ss_conf 97899999997029999999998726689-------96899875998988898765300011221051999999999999
Q ss_pred CCCCCEEEEECCHHHHHCCCCCCCCC-CCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHCCHHHHHHCEE
Q ss_conf 03898399973616630155444344-7778888766302660388730489999985201114320014
Q gi|254780163|r 293 ESYANAILYIDEIHTLVGAGSASGIS-VDASNLLKPALSSGAVRCIGSTTYSEYRQFFEKDKALVRRFQK 361 (798)
Q Consensus 293 ~~~~~~ilfideih~ligag~~~g~~-~d~an~lkP~L~rg~~~~IgatT~~ey~~~~e~d~al~rrF~~ 361 (798)
T Consensus 75 ~~~~~~viiiDei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~n~----~~~~~~~~~~~~~~~ 140 (148)
T smart00382 75 RKLKPDVLILDEITSLLDAEQEALLLLLEELRLLLLLKSEKNLTVILTTND----EKDLGPALLRRRFDR 140 (148)
T ss_pred HHCCCCEEEEECCHHHCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEECC----CCCCCHHHHCCCCCE
T ss_conf 844998999827502147620799999999998517657899899995699----522498770744787