RPSBLAST alignment for GI: 254780163 and conserved domain: smart00382
>gnl|CDD|128665 smart00382, AAA, ATPases associated with a variety of cellular activities. AAA - ATPases associated with a variety of cellular activities. This profile/alignment only detects a fraction of this vast family. The poorly conserved N-terminal helix is missing from the alignment. Length = 148
Score = 50.1 bits (119), Expect = 2e-06
Identities = 29/138 (21%), Positives = 54/138 (39%), Gaps = 10/138 (7%)
Query: 231 VGDPGVGKTAIAEGFAKQIVDGMVPDILLGARIFSLDMGN-----LIAGTRYRGDFEERI 285
VG PG GKT +A A+++ I + ++ + ++ G + G E R+
Sbjct: 8 VGPPGSGKTTLARALARELGPPGGGVIYIDGEDILEEVLDQLLLIIVGGKKASGSGELRL 67
Query: 286 KKIVKEIESYANAILYIDEIHTLVGAGSASGISVDA-SNLLKPALSSGAVRCIGSTTYSE 344
+ + +L +DEI +L+ A + + + LL S + I +T
Sbjct: 68 RLALALARKLKPDVLILDEITSLLDAEQEALLLLLEELRLLLLLKSEKNLTVILTTN--- 124
Query: 345 YRQFFEKDKALVRRFQKI 362
+ L RRF +
Sbjct: 125 -DEKDLGPALLRRRFDRR 141