RPSBLAST alignment for GI: 254780163 and conserved domain: TIGR03346
>gnl|CDD|163223 TIGR03346, chaperone_ClpB, ATP-dependent chaperone ClpB. Members of this protein family are the bacterial ATP-dependent chaperone ClpB. This protein belongs to the AAA family, ATPases associated with various cellular activities (pfam00004). This molecular chaperone does not act as a protease, but rather serves to disaggregate misfolded and aggregated proteins. Length = 852
Score = 315 bits (809), Expect = 3e-86
Identities = 134/295 (45%), Positives = 197/295 (66%), Gaps = 4/295 (1%)
Query: 468 LSNLEKNLGTVVYGQEEAIKKLSSSIKIARAGLSDPNKPIGCYVFSGPTGVGKTEISKQL 527
L ++E+ L V GQ+EA++ +S +I+ +RAGLSDPN+PIG ++F GPTGVGKTE++K L
Sbjct: 556 LLHMEEVLHERVVGQDEAVEAVSDAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELAKAL 615
Query: 528 A---FALGVQLLRFDMSEYMERHAVSRLIGAPPGYVGFGQGGILADSVDQNPYSVVLLDE 584
A F ++R DMSEYME+H+V+RLIGAPPGYVG+ +GG L ++V + PYSVVL DE
Sbjct: 616 AEFLFDDEDAMVRIDMSEYMEKHSVARLIGAPPGYVGYEEGGQLTEAVRRKPYSVVLFDE 675
Query: 585 IEKSHPDVLNILLQIMDYGILTDQSGKKISFRNVILIMTTNAGALEMSKARIGFGSSRND 644
+EK+HPDV N+LLQ++D G LTD G+ + FRN ++IMT+N G+ + + G
Sbjct: 676 VEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGSQFIQELAGGDDYEEMR 735
Query: 645 DADKEALRNFLSPEFLNRLDSIIPFFPLSSDIIRQVVHKFIMKLELQLQEKGISFHFSEE 704
+A E LR PEFLNR+D I+ F PL + I ++V + +L +L E+ I+ S+
Sbjct: 736 EAVMEVLRAHFRPEFLNRIDEIVVFHPLGREQIARIVEIQLGRLRKRLAERKITLELSDA 795
Query: 705 VINWLVSHGYDVKMGARPLERIIKEHVKVPLADEILFGKLKKGGGVVKVSLNPDK 759
+++L GYD GARPL+R I+ ++ PLA +IL G++ G + V + +
Sbjct: 796 ALDFLAEAGYDPVYGARPLKRAIQREIENPLAKKILAGEVAD-GDTIVVDVEGGR 849