RPSBLAST alignment for GI: 254780163 and conserved domain: TIGR03346

>gnl|CDD|163223 TIGR03346, chaperone_ClpB, ATP-dependent chaperone ClpB. Members of this protein family are the bacterial ATP-dependent chaperone ClpB. This protein belongs to the AAA family, ATPases associated with various cellular activities (pfam00004). This molecular chaperone does not act as a protease, but rather serves to disaggregate misfolded and aggregated proteins. Length = 852
 Score =  315 bits (809), Expect = 3e-86
 Identities = 134/295 (45%), Positives = 197/295 (66%), Gaps = 4/295 (1%)

Query: 468 LSNLEKNLGTVVYGQEEAIKKLSSSIKIARAGLSDPNKPIGCYVFSGPTGVGKTEISKQL 527
           L ++E+ L   V GQ+EA++ +S +I+ +RAGLSDPN+PIG ++F GPTGVGKTE++K L
Sbjct: 556 LLHMEEVLHERVVGQDEAVEAVSDAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELAKAL 615

Query: 528 A---FALGVQLLRFDMSEYMERHAVSRLIGAPPGYVGFGQGGILADSVDQNPYSVVLLDE 584
           A   F     ++R DMSEYME+H+V+RLIGAPPGYVG+ +GG L ++V + PYSVVL DE
Sbjct: 616 AEFLFDDEDAMVRIDMSEYMEKHSVARLIGAPPGYVGYEEGGQLTEAVRRKPYSVVLFDE 675

Query: 585 IEKSHPDVLNILLQIMDYGILTDQSGKKISFRNVILIMTTNAGALEMSKARIGFGSSRND 644
           +EK+HPDV N+LLQ++D G LTD  G+ + FRN ++IMT+N G+  + +   G       
Sbjct: 676 VEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGSQFIQELAGGDDYEEMR 735

Query: 645 DADKEALRNFLSPEFLNRLDSIIPFFPLSSDIIRQVVHKFIMKLELQLQEKGISFHFSEE 704
           +A  E LR    PEFLNR+D I+ F PL  + I ++V   + +L  +L E+ I+   S+ 
Sbjct: 736 EAVMEVLRAHFRPEFLNRIDEIVVFHPLGREQIARIVEIQLGRLRKRLAERKITLELSDA 795

Query: 705 VINWLVSHGYDVKMGARPLERIIKEHVKVPLADEILFGKLKKGGGVVKVSLNPDK 759
            +++L   GYD   GARPL+R I+  ++ PLA +IL G++   G  + V +   +
Sbjct: 796 ALDFLAEAGYDPVYGARPLKRAIQREIENPLAKKILAGEVAD-GDTIVVDVEGGR 849