RPSBLAST alignment for GI: 254780163 and conserved domain: CHL00095
>gnl|CDD|177027 CHL00095, clpC, Clp protease ATP binding subunit. Length = 821
Score = 625 bits (1613), Expect = e-179
Identities = 315/844 (37%), Positives = 470/844 (55%), Gaps = 107/844 (12%)
Query: 4 FSENLEKVLHQALVLANERNHEYATLEHLLLALIDDSD--AAIVMLSCNVDLKVLKNNLL 61
F+E KV+ + A H + E +LL LI + AA + S V LK + +
Sbjct: 5 FTEKAIKVIMLSQEEARRLGHNFVGTEQILLGLIGEGTGIAARALKSMGVTLKDARIEVE 64
Query: 62 NYIDNDSSNKLKNGF-RVECKPTSSFQRVVQRAVLHVQSTGRGIVTGANILVALFSEPDS 120
I GF VE T +RV++ ++ + G + ++L+AL E +
Sbjct: 65 KII------GRGTGFVAVEIPFTPRAKRVLEMSLEEARDLGHNYIGTEHLLLALLEEGEG 118
Query: 121 HATYFLQEQEMTLYDAVNFISHGISKRKEFANFQSKLNVDGSSAGSDGEGFVNDYQAKTD 180
A L+ V+ R N G E + Q+++
Sbjct: 119 VAARVLE------NLGVDLSK----IRSLILNL----------IGEIIEAILGAEQSRSK 158
Query: 181 LNLFPALSAYCVDLTEKVKKGKVDILVGRHEEINRTIQILCRRSKNNPLYVGDPGVGKTA 240
P L + +LT++ G +D ++GR +EI R IQIL RR+KNNP+ +G+PGVGKTA
Sbjct: 159 T---PTLEEFGTNLTKEAIDGNLDPVIGREKEIERVIQILGRRTKNNPILIGEPGVGKTA 215
Query: 241 IAEGFAKQIVDGMVPDILLGARIFSLDMGNLIAGTRYRGDFEERIKKIVKEIESYANAIL 300
IAEG A++IV+ VPDIL + +LD+G L+AGT+YRG+FEER+K+I EI+ N IL
Sbjct: 216 IAEGLAQRIVNRDVPDILEDKLVITLDIGLLLAGTKYRGEFEERLKRIFDEIQENNNIIL 275
Query: 301 YIDEIHTLVGAGSASGISVDASNLLKPALSSGAVRCIGSTTYSEYRQFFEKDKALVRRFQ 360
IDE+HTL+GAG+A G ++DA+N+LKPAL+ G ++CIG+TT EYR+ EKD AL RRFQ
Sbjct: 276 VIDEVHTLIGAGAAEG-AIDAANILKPALARGELQCIGATTLDEYRKHIEKDPALERRFQ 334
Query: 361 KIDVSEPSIEDAIEIVKGIKPYFEEHHQLRYSKEAIRAAVQLSVRHFTSRKLPDKAIDVI 420
+ V EPS+E+ IEI+ G++ +E+HH L S +A+ AA +LS ++ R LPDKAID++
Sbjct: 335 PVYVGEPSVEETIEILFGLRSRYEKHHNLSISDKALEAAAKLSDQYIADRFLPDKAIDLL 394
Query: 421 DEAGASQIL---------QPLSKR-RKFITEKD--------------------IKKTIAS 450
DEAG+ L + L K R+ + +KD ++ IA+
Sbjct: 395 DEAGSRVRLINSRLPPAARELDKELREILKDKDEAIREQDFETAKQLRDREMEVRAQIAA 454
Query: 451 MNRSIHTTSFSRDDDSVLS----------------------------NLEKNLGTVVYGQ 482
+ +S T R + V++ ++E+ L + GQ
Sbjct: 455 IIQSKKTEEEKRLEVPVVTEEDIAEIVSAWTGIPVNKLTKSESEKLLHMEETLHKRIIGQ 514
Query: 483 EEAIKKLSSSIKIARAGLSDPNKPIGCYVFSGPTGVGKTEISKQLA---FALGVQLLRFD 539
+EA+ +S +I+ AR GL +PN+PI ++FSGPTGVGKTE++K LA F ++R D
Sbjct: 515 DEAVVAVSKAIRRARVGLKNPNRPIASFLFSGPTGVGKTELTKALASYFFGSEDAMIRLD 574
Query: 540 MSEYMERHAVSRLIGAPPGYVGFGQGGILADSVDQNPYSVVLLDEIEKSHPDVLNILLQI 599
MSEYME+H VS+LIG+PPGYVG+ +GG L ++V + PY+VVL DEIEK+HPD+ N+LLQI
Sbjct: 575 MSEYMEKHTVSKLIGSPPGYVGYNEGGQLTEAVRKKPYTVVLFDEIEKAHPDIFNLLLQI 634
Query: 600 MDYGILTDQSGKKISFRNVILIMTTNAGA--LEMSKARIGFGSSRNDDADK--------- 648
+D G LTD G+ I F+N ++IMT+N G+ +E + +GF S N ++K
Sbjct: 635 LDDGRLTDSKGRTIDFKNTLIIMTSNLGSKVIETNSGGLGFELSENQLSEKQYKRLSNLV 694
Query: 649 -EALRNFLSPEFLNRLDSIIPFFPLSSDIIRQVVHKFIMKLELQLQEKGISFHFSEEVIN 707
E L+ F PEFLNRLD II F L+ + + ++ + L +L E+GI +E +
Sbjct: 695 NEELKQFFRPEFLNRLDEIIVFRQLTKNDVWEIAEIMLKNLFKRLNEQGIQLEVTERIKT 754
Query: 708 WLVSHGYDVKMGARPLERIIKEHVKVPLADEILFGKLKKGGGVVKVSLNPDKSASSPIFF 767
L+ GY+ GARPL R I ++ PLA+E+L K+K G ++ V +N +K +
Sbjct: 755 LLIEEGYNPLYGARPLRRAIMRLLEDPLAEEVLSFKIKPGDIII-VDVNDEKEVKILLIN 813
Query: 768 EIEN 771
+
Sbjct: 814 KDNL 817