BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= gi|254780164|ref|YP_003064577.1| ATP-dependent Clp protease adaptor protein ClpS [Candidatus Liberibacter asiaticus str. psy62] (138 letters) Database: nr 13,984,884 sequences; 4,792,584,752 total letters Searching..................................................done Results from round 1 >gi|254780164|ref|YP_003064577.1| ATP-dependent Clp protease adaptor protein ClpS [Candidatus Liberibacter asiaticus str. psy62] gi|254039841|gb|ACT56637.1| ATP-dependent Clp protease adaptor protein ClpS [Candidatus Liberibacter asiaticus str. psy62] Length = 138 Score = 290 bits (741), Expect = 6e-77, Method: Compositional matrix adjust. Identities = 138/138 (100%), Positives = 138/138 (100%) Query: 1 MYLFDDGSMYHRVKRDGILALMSFIFMADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLY 60 MYLFDDGSMYHRVKRDGILALMSFIFMADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLY Sbjct: 1 MYLFDDGSMYHRVKRDGILALMSFIFMADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLY 60 Query: 61 RVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQV 120 RVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQV Sbjct: 61 RVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQV 120 Query: 121 MNYSRQHQYPLQCIMEQK 138 MNYSRQHQYPLQCIMEQK Sbjct: 121 MNYSRQHQYPLQCIMEQK 138 >gi|315122668|ref|YP_004063157.1| ATP-dependent Clp protease adaptor protein ClpS [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313496070|gb|ADR52669.1| ATP-dependent Clp protease adaptor protein ClpS [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 120 Score = 197 bits (500), Expect = 5e-49, Method: Compositional matrix adjust. Identities = 88/120 (73%), Positives = 107/120 (89%) Query: 19 LALMSFIFMADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHV 78 + +SF+FMA + MN+KG+A D+C++++ SSKVR P+LYRVLLVND+YTPMEFVIHV Sbjct: 1 MVAISFVFMAKNHMNEKGVARTDSCINTKEEISSKVRAPRLYRVLLVNDDYTPMEFVIHV 60 Query: 79 LQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 LQ FF+KDHE++K IMLK+HHQGIGECGVYAYEIAEMKVNQVMNYSRQ+Q+PLQCIME K Sbjct: 61 LQKFFHKDHESSKSIMLKIHHQGIGECGVYAYEIAEMKVNQVMNYSRQNQHPLQCIMEHK 120 >gi|298291485|ref|YP_003693424.1| ATP-dependent Clp protease adaptor protein ClpS [Starkeya novella DSM 506] gi|296927996|gb|ADH88805.1| ATP-dependent Clp protease adaptor protein ClpS [Starkeya novella DSM 506] Length = 123 Score = 137 bits (346), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 64/114 (56%), Positives = 84/114 (73%), Gaps = 6/114 (5%) Query: 27 MADSRMNKKGIAEFDNCLDSEV--RFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFY 84 MAD ++G DN + V R +V+ P LYRVLL+ND+YTPMEFV+HVL++FF Sbjct: 14 MADEERRRRG----DNAPGTAVITRTKPQVKRPSLYRVLLLNDDYTPMEFVVHVLEHFFT 69 Query: 85 KDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 K+ E A IML VH G+GECGVY YE+AE KV QVM+++R+HQ+PLQC+ME+K Sbjct: 70 KNREEATQIMLHVHQHGVGECGVYTYEVAETKVTQVMDFARKHQHPLQCVMEKK 123 >gi|209884899|ref|YP_002288756.1| ATP-dependent Clp protease adaptor protein ClpS [Oligotropha carboxidovorans OM5] gi|209873095|gb|ACI92891.1| ATP-dependent Clp protease adaptor protein ClpS [Oligotropha carboxidovorans OM5] Length = 179 Score = 137 bits (346), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 58/91 (63%), Positives = 73/91 (80%) Query: 48 VRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGV 107 R + + P LYRVL++ND+YTPMEFV+HVL+ FF KD E A IML VHH GIGECGV Sbjct: 89 TRTKPRAKRPSLYRVLILNDDYTPMEFVVHVLEKFFQKDVEAATKIMLHVHHHGIGECGV 148 Query: 108 YAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 + YEIAE KV QVM+++R+HQ+PLQC+ME+K Sbjct: 149 FTYEIAETKVTQVMDFARKHQHPLQCVMEKK 179 >gi|110633725|ref|YP_673933.1| ATP-dependent Clp protease adaptor protein ClpS [Mesorhizobium sp. BNC1] gi|110284709|gb|ABG62768.1| ATP-dependent Clp protease adaptor protein ClpS [Chelativorans sp. BNC1] Length = 133 Score = 137 bits (344), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 57/91 (62%), Positives = 75/91 (82%) Query: 48 VRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGV 107 R +K + P LYRVLL+ND+YTPMEFV+HVL+ FF KD E A IML VH+ G+GECG+ Sbjct: 43 TRTRTKTKKPSLYRVLLLNDDYTPMEFVVHVLERFFQKDREAATMIMLHVHNHGVGECGI 102 Query: 108 YAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 Y +E+AE KV+QVM+++RQHQ+PLQC+ME+K Sbjct: 103 YTFEVAETKVSQVMDFARQHQHPLQCVMEKK 133 >gi|241204496|ref|YP_002975592.1| ATP-dependent Clp protease adaptor protein ClpS [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240858386|gb|ACS56053.1| ATP-dependent Clp protease adaptor protein ClpS [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 118 Score = 136 bits (342), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 62/110 (56%), Positives = 81/110 (73%), Gaps = 2/110 (1%) Query: 31 RMNKKGIAEFDNCLDSEV--RFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHE 88 RM DN + V R K + P LYRVLL+ND+YTPMEFVIH+L+ FF KD E Sbjct: 9 RMQNDSERNGDNANRTSVITRTKPKTKKPNLYRVLLLNDDYTPMEFVIHILERFFQKDRE 68 Query: 89 TAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 +A IML VH+ G+GECG++ YE+AE KV+QVM+++RQHQ+PLQC+ME+K Sbjct: 69 SATRIMLHVHNHGVGECGIFTYEVAETKVSQVMDFARQHQHPLQCVMEKK 118 >gi|150396335|ref|YP_001326802.1| ATP-dependent Clp protease adaptor protein ClpS [Sinorhizobium medicae WSM419] gi|150027850|gb|ABR59967.1| ATP-dependent Clp protease adaptor protein ClpS [Sinorhizobium medicae WSM419] Length = 117 Score = 135 bits (341), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 58/91 (63%), Positives = 73/91 (80%) Query: 48 VRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGV 107 R K + P LYRVLL+ND+YTPMEFVIH+L+ FF KD E A IML VH+ G+GECGV Sbjct: 27 TRTKPKTKKPSLYRVLLLNDDYTPMEFVIHILERFFQKDREEATTIMLHVHNHGVGECGV 86 Query: 108 YAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 + YE+AE KV QVM+++RQHQ+PLQC+ME+K Sbjct: 87 FTYEVAETKVTQVMDFARQHQHPLQCVMEKK 117 >gi|190891596|ref|YP_001978138.1| ATP-dependent Clp protease adaptor protein [Rhizobium etli CIAT 652] gi|190696875|gb|ACE90960.1| ATP-dependent Clp protease adaptor protein [Rhizobium etli CIAT 652] Length = 117 Score = 135 bits (340), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 62/111 (55%), Positives = 80/111 (72%), Gaps = 3/111 (2%) Query: 31 RMNKKGIAEFDNCLDSE---VRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDH 87 RM G DN R K + P LYRVLL+ND+YTPMEFVIH+L+ FF KD Sbjct: 7 RMQNNGERNGDNGNRGTSVITRTKPKTKKPNLYRVLLLNDDYTPMEFVIHILERFFQKDR 66 Query: 88 ETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 E+A IML VH+ G+GECG++ YE+AE KV+QVM+++RQHQ+PLQC+ME+K Sbjct: 67 ESATRIMLHVHNHGVGECGIFTYEVAETKVSQVMDFARQHQHPLQCVMEKK 117 >gi|86357527|ref|YP_469419.1| ATP-dependent Clp protease adaptor protein ClpS [Rhizobium etli CFN 42] gi|218460323|ref|ZP_03500414.1| ATP-dependent Clp protease adaptor protein ClpS [Rhizobium etli Kim 5] gi|86281629|gb|ABC90692.1| ATP-dependent Clp protease adaptor protein [Rhizobium etli CFN 42] Length = 117 Score = 135 bits (340), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 57/91 (62%), Positives = 75/91 (82%) Query: 48 VRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGV 107 R K + P LYRVLL+ND+YTPMEFVIH+L+ FF KD E+A IML VH+ G+GECG+ Sbjct: 27 TRTKPKTKKPNLYRVLLLNDDYTPMEFVIHILERFFQKDRESATRIMLHVHNHGVGECGI 86 Query: 108 YAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 + YE+AE KV+QVM+++RQHQ+PLQC+ME+K Sbjct: 87 FTYEVAETKVSQVMDFARQHQHPLQCVMEKK 117 >gi|116251968|ref|YP_767806.1| ATP-dependent Clp protease adaptor protein ClpS [Rhizobium leguminosarum bv. viciae 3841] gi|115256616|emb|CAK07704.1| putative ATP-dependent CLP protease adaptor protein [Rhizobium leguminosarum bv. viciae 3841] Length = 109 Score = 135 bits (340), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 57/91 (62%), Positives = 75/91 (82%) Query: 48 VRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGV 107 R K + P LYRVLL+ND+YTPMEFVIH+L+ FF KD E+A IML VH+ G+GECG+ Sbjct: 19 TRTKPKTKKPNLYRVLLLNDDYTPMEFVIHILERFFQKDRESATRIMLHVHNHGVGECGI 78 Query: 108 YAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 + YE+AE KV+QVM+++RQHQ+PLQC+ME+K Sbjct: 79 FTYEVAETKVSQVMDFARQHQHPLQCVMEKK 109 >gi|209549170|ref|YP_002281087.1| ATP-dependent Clp protease adaptor protein ClpS [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209534926|gb|ACI54861.1| ATP-dependent Clp protease adaptor protein ClpS [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 116 Score = 135 bits (340), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 57/91 (62%), Positives = 75/91 (82%) Query: 48 VRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGV 107 R K + P LYRVLL+ND+YTPMEFVIH+L+ FF KD E+A IML VH+ G+GECG+ Sbjct: 26 TRTKPKTKKPNLYRVLLLNDDYTPMEFVIHILERFFQKDRESATRIMLHVHNHGVGECGI 85 Query: 108 YAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 + YE+AE KV+QVM+++RQHQ+PLQC+ME+K Sbjct: 86 FTYEVAETKVSQVMDFARQHQHPLQCVMEKK 116 >gi|222085850|ref|YP_002544381.1| ATP-dependent Clp protease adaptor protein [Agrobacterium radiobacter K84] gi|221723298|gb|ACM26454.1| ATP-dependent Clp protease adaptor protein [Agrobacterium radiobacter K84] Length = 117 Score = 135 bits (339), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 57/91 (62%), Positives = 76/91 (83%) Query: 48 VRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGV 107 R +K + P LYRVLL+ND+YTPMEFVIH+L+ FF KD E+A IML VH+ G+GECG+ Sbjct: 27 TRTKAKTKKPNLYRVLLLNDDYTPMEFVIHILERFFQKDLESATRIMLHVHNHGVGECGI 86 Query: 108 YAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 + YE+AE KV+QVM+++RQHQ+PLQC+ME+K Sbjct: 87 FTYEVAETKVSQVMDFARQHQHPLQCVMEKK 117 >gi|227821888|ref|YP_002825858.1| ATP-dependent Clp protease adaptor protein ClpS [Sinorhizobium fredii NGR234] gi|227340887|gb|ACP25105.1| ATP-dependent Clp protease adaptor protein ClpS 1 [Sinorhizobium fredii NGR234] Length = 117 Score = 135 bits (339), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 57/91 (62%), Positives = 73/91 (80%) Query: 48 VRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGV 107 R K + P LYRVLL+ND+YTPMEFV+H+L+ FF KD E A IML VH+ G+GECGV Sbjct: 27 TRTKPKTKKPSLYRVLLLNDDYTPMEFVVHILERFFQKDREQATVIMLHVHNHGVGECGV 86 Query: 108 YAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 + YE+AE KV QVM+++RQHQ+PLQC+ME+K Sbjct: 87 FTYEVAETKVTQVMDFARQHQHPLQCVMEKK 117 >gi|27380265|ref|NP_771794.1| ATP-dependent Clp protease adaptor protein ClpS [Bradyrhizobium japonicum USDA 110] gi|27353429|dbj|BAC50419.1| yljA [Bradyrhizobium japonicum USDA 110] Length = 130 Score = 135 bits (339), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 58/91 (63%), Positives = 73/91 (80%) Query: 48 VRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGV 107 + K + P LYRVL++ND+YTPMEFV+HVL+ FF KD E A IML VHH GIGECGV Sbjct: 40 TKVKPKTKRPNLYRVLILNDDYTPMEFVVHVLEKFFQKDVEAATKIMLHVHHHGIGECGV 99 Query: 108 YAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 + YEIAE KV QVM+++R+HQ+PLQC+ME+K Sbjct: 100 FTYEIAETKVTQVMDFARKHQHPLQCVMEKK 130 >gi|158423218|ref|YP_001524510.1| ATP-dependent Clp protease adaptor protein [Azorhizobium caulinodans ORS 571] gi|158330107|dbj|BAF87592.1| ATP-dependent Clp protease adaptor protein [Azorhizobium caulinodans ORS 571] Length = 131 Score = 135 bits (339), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 57/91 (62%), Positives = 73/91 (80%) Query: 48 VRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGV 107 R +V+ P LYRVLL+ND+YTPM+FV+HVL+ FF K E A IML VHH G+GECGV Sbjct: 41 TRTKPQVKRPNLYRVLLLNDDYTPMDFVVHVLERFFSKSREEANTIMLHVHHHGVGECGV 100 Query: 108 YAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 Y YE+AE KV QVM+++R+HQ+PLQC+ME+K Sbjct: 101 YTYEVAETKVTQVMDFARKHQHPLQCVMEKK 131 >gi|75675888|ref|YP_318309.1| ATP-dependent Clp protease adaptor protein ClpS [Nitrobacter winogradskyi Nb-255] gi|74420758|gb|ABA04957.1| ATP-dependent Clp protease adaptor protein ClpS [Nitrobacter winogradskyi Nb-255] Length = 136 Score = 134 bits (338), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 57/91 (62%), Positives = 74/91 (81%) Query: 48 VRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGV 107 + +K + P LYRVL++ND+YTPMEFV+HVL+ FF KD E A IML VHH GIGECGV Sbjct: 46 TKVRTKTKRPNLYRVLILNDDYTPMEFVVHVLEKFFQKDLEAATQIMLHVHHHGIGECGV 105 Query: 108 YAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 + YE+AE KV QVM+++R+HQ+PLQC+ME+K Sbjct: 106 FTYEVAETKVTQVMDFARKHQHPLQCVMEKK 136 >gi|15888689|ref|NP_354370.1| ATP-dependent Clp protease adaptor protein ClpS [Agrobacterium tumefaciens str. C58] gi|24638402|sp|Q8UFN4|CLPS1_AGRT5 RecName: Full=ATP-dependent Clp protease adapter protein ClpS 1 gi|15156427|gb|AAK87155.1| ATP-dependent Clp protease adaptor protein ClpS [Agrobacterium tumefaciens str. C58] Length = 117 Score = 134 bits (338), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 58/91 (63%), Positives = 73/91 (80%) Query: 48 VRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGV 107 R K + P LYRVLL+ND+YTPMEFVIH+L+ FF KD E A IML VH G+GECGV Sbjct: 27 TRVKPKTKRPNLYRVLLLNDDYTPMEFVIHILERFFQKDREAATRIMLHVHQHGVGECGV 86 Query: 108 YAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 + YE+AE KV+QVM+++RQHQ+PLQC+ME+K Sbjct: 87 FTYEVAETKVSQVMDFARQHQHPLQCVMEKK 117 >gi|85716350|ref|ZP_01047323.1| ATP-dependent Clp protease adaptor protein ClpS [Nitrobacter sp. Nb-311A] gi|85696866|gb|EAQ34751.1| ATP-dependent Clp protease adaptor protein ClpS [Nitrobacter sp. Nb-311A] Length = 110 Score = 134 bits (338), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 61/110 (55%), Positives = 78/110 (70%), Gaps = 4/110 (3%) Query: 29 DSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHE 88 D R +G D + K + P LYRVL++ND+YTPMEFV+HVL+ FF KD E Sbjct: 5 DDRAGGRG----DPAASVITKVRPKTKRPNLYRVLILNDDYTPMEFVVHVLEKFFQKDLE 60 Query: 89 TAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 A IML VHH GIGECGV+ YE+AE KV QVM+++R+HQ+PLQC+ME+K Sbjct: 61 AATQIMLHVHHHGIGECGVFTYEVAETKVTQVMDFARKHQHPLQCVMEKK 110 >gi|92117938|ref|YP_577667.1| ATP-dependent Clp protease adaptor protein ClpS [Nitrobacter hamburgensis X14] gi|91800832|gb|ABE63207.1| ATP-dependent Clp protease adaptor protein ClpS [Nitrobacter hamburgensis X14] Length = 124 Score = 134 bits (338), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 58/91 (63%), Positives = 73/91 (80%) Query: 48 VRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGV 107 + K + P LYRVL++ND+YTPMEFV+HVL+ FF KD E A IML VHH GIGECGV Sbjct: 34 TKVKPKTKRPNLYRVLILNDDYTPMEFVVHVLEKFFQKDVEAATEIMLHVHHHGIGECGV 93 Query: 108 YAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 + YEIAE KV QVM+++R+HQ+PLQC+ME+K Sbjct: 94 FTYEIAETKVTQVMDFARKHQHPLQCVMEKK 124 >gi|299135164|ref|ZP_07028355.1| ATP-dependent Clp protease adaptor protein ClpS [Afipia sp. 1NLS2] gi|298590141|gb|EFI50345.1| ATP-dependent Clp protease adaptor protein ClpS [Afipia sp. 1NLS2] Length = 228 Score = 134 bits (337), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 56/91 (61%), Positives = 73/91 (80%) Query: 48 VRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGV 107 + + + P LYRVL++ND+YTPMEFV+HVL+ FF KD E A IML VHH GIGECG+ Sbjct: 138 TKTKPRTKRPSLYRVLILNDDYTPMEFVVHVLERFFQKDVEAATKIMLHVHHHGIGECGI 197 Query: 108 YAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 + YEIAE KV QVM+++R+HQ+PLQC+ME+K Sbjct: 198 FTYEIAETKVTQVMDFARKHQHPLQCVMEKK 228 >gi|325292723|ref|YP_004278587.1| ATP-dependent Clp protease adapter protein clpS 1 [Agrobacterium sp. H13-3] gi|325060576|gb|ADY64267.1| ATP-dependent Clp protease adapter protein clpS 1 [Agrobacterium sp. H13-3] Length = 117 Score = 134 bits (337), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 58/91 (63%), Positives = 73/91 (80%) Query: 48 VRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGV 107 R K + P LYRVLL+ND+YTPMEFVIH+L+ FF KD E A IML VH G+GECGV Sbjct: 27 TRVKPKTKRPNLYRVLLLNDDYTPMEFVIHILERFFQKDREAATRIMLHVHQHGVGECGV 86 Query: 108 YAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 + YE+AE KV+QVM+++RQHQ+PLQC+ME+K Sbjct: 87 FTYEVAETKVSQVMDFARQHQHPLQCVMEKK 117 >gi|37077096|sp|Q89JW5|CLPS2_BRAJA RecName: Full=ATP-dependent Clp protease adapter protein ClpS 2 Length = 110 Score = 134 bits (336), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 58/91 (63%), Positives = 73/91 (80%) Query: 48 VRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGV 107 + K + P LYRVL++ND+YTPMEFV+HVL+ FF KD E A IML VHH GIGECGV Sbjct: 20 TKVKPKTKRPNLYRVLILNDDYTPMEFVVHVLEKFFQKDVEAATKIMLHVHHHGIGECGV 79 Query: 108 YAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 + YEIAE KV QVM+++R+HQ+PLQC+ME+K Sbjct: 80 FTYEIAETKVTQVMDFARKHQHPLQCVMEKK 110 >gi|15965239|ref|NP_385592.1| ATP-dependent Clp protease adaptor protein ClpS [Sinorhizobium meliloti 1021] gi|307309262|ref|ZP_07588930.1| ATP-dependent Clp protease adaptor protein ClpS [Sinorhizobium meliloti BL225C] gi|307317004|ref|ZP_07596445.1| ATP-dependent Clp protease adaptor protein ClpS [Sinorhizobium meliloti AK83] gi|21542320|sp|Q92Q63|CLPS1_RHIME RecName: Full=ATP-dependent Clp protease adapter protein ClpS 1 gi|15074419|emb|CAC46065.1| Putative ATP-dependent Clp protease adapter protein clpS 1 [Sinorhizobium meliloti 1021] gi|306897092|gb|EFN27837.1| ATP-dependent Clp protease adaptor protein ClpS [Sinorhizobium meliloti AK83] gi|306900263|gb|EFN30880.1| ATP-dependent Clp protease adaptor protein ClpS [Sinorhizobium meliloti BL225C] Length = 117 Score = 134 bits (336), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 57/91 (62%), Positives = 73/91 (80%) Query: 48 VRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGV 107 R K + P LYRVLL+ND+YTPMEFVIH+L+ FF K+ E A IML VH+ G+GECGV Sbjct: 27 TRTKPKTKKPSLYRVLLLNDDYTPMEFVIHILERFFQKNREEATVIMLHVHNHGVGECGV 86 Query: 108 YAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 + YE+AE KV QVM+++RQHQ+PLQC+ME+K Sbjct: 87 FTYEVAETKVTQVMDFARQHQHPLQCVMEKK 117 >gi|148256120|ref|YP_001240705.1| ATP-dependent Clp protease adaptor protein ClpS, modulator of ClpA substrate specificity [Bradyrhizobium sp. BTAi1] gi|146408293|gb|ABQ36799.1| ATP-dependent Clp protease adaptor protein ClpS, modulator of ClpA substrate specificity [Bradyrhizobium sp. BTAi1] Length = 110 Score = 134 bits (336), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 58/91 (63%), Positives = 73/91 (80%) Query: 48 VRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGV 107 + K + P LYRVL++ND+YTPMEFV+HVL+ FF KD E A IML VHH GIGECGV Sbjct: 20 TKVKPKTKRPNLYRVLILNDDYTPMEFVVHVLEKFFNKDVEAATKIMLHVHHHGIGECGV 79 Query: 108 YAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 + YEIAE KV QVM+++R+HQ+PLQC+ME+K Sbjct: 80 FTYEIAETKVTQVMDFARKHQHPLQCVMEKK 110 >gi|222148871|ref|YP_002549828.1| ATP-dependent Clp protease adaptor protein ClpS [Agrobacterium vitis S4] gi|221735857|gb|ACM36820.1| conserved hypothetical protein [Agrobacterium vitis S4] Length = 117 Score = 134 bits (336), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 56/91 (61%), Positives = 74/91 (81%) Query: 48 VRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGV 107 R K + P LYRVLL+ND+YTPMEFVIH+L+ FF KD E A +ML VH+ G+GECGV Sbjct: 27 TRTKPKTKKPNLYRVLLLNDDYTPMEFVIHILERFFQKDREAATLVMLHVHNHGVGECGV 86 Query: 108 YAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 + YE+AE KV+QVM+++RQH++PLQC+ME+K Sbjct: 87 FTYEVAETKVSQVMDFARQHEHPLQCVMEKK 117 >gi|114704886|ref|ZP_01437794.1| ATP-dependent Clp protease adaptor protein ClpS [Fulvimarina pelagi HTCC2506] gi|114539671|gb|EAU42791.1| ATP-dependent Clp protease adaptor protein ClpS [Fulvimarina pelagi HTCC2506] Length = 135 Score = 133 bits (335), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 58/90 (64%), Positives = 72/90 (80%) Query: 48 VRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGV 107 R K++ P LYRVLL+ND+YTPMEFVIHVL+ FF KD E A IML VH G+GECGV Sbjct: 45 TRSKPKLQKPSLYRVLLLNDDYTPMEFVIHVLERFFQKDREAATQIMLHVHRHGVGECGV 104 Query: 108 YAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 + YE+AE KV QVM+++RQHQ+PLQC+ME+ Sbjct: 105 FTYEVAETKVTQVMDFARQHQHPLQCVMEK 134 >gi|90419585|ref|ZP_01227495.1| ATP-dependent Clp protease adaptor protein [Aurantimonas manganoxydans SI85-9A1] gi|90336522|gb|EAS50263.1| ATP-dependent Clp protease adaptor protein [Aurantimonas manganoxydans SI85-9A1] Length = 122 Score = 133 bits (335), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 58/90 (64%), Positives = 72/90 (80%) Query: 48 VRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGV 107 R K + P LYRVLL+ND+YTPMEFVIHVL+ FF KD E A IML VH+ G+GECGV Sbjct: 32 TRTKPKTQKPSLYRVLLLNDDYTPMEFVIHVLERFFQKDREAATRIMLHVHNHGVGECGV 91 Query: 108 YAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 + YE+AE KV QVM+++RQHQ+PLQC+ME+ Sbjct: 92 FTYEVAETKVTQVMDFARQHQHPLQCVMEK 121 >gi|307946408|ref|ZP_07661743.1| ATP-dependent Clp protease adaptor protein ClpS [Roseibium sp. TrichSKD4] gi|307770072|gb|EFO29298.1| ATP-dependent Clp protease adaptor protein ClpS [Roseibium sp. TrichSKD4] Length = 110 Score = 133 bits (335), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 57/91 (62%), Positives = 75/91 (82%) Query: 48 VRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGV 107 R K + P LYRVLL+ND+YTPMEFVIHV+++FF K+ E A IML VHH G+GECG+ Sbjct: 20 TRTKPKTKRPNLYRVLLLNDDYTPMEFVIHVVESFFQKNREEATHIMLHVHHHGVGECGI 79 Query: 108 YAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 Y+YE+AE KV QVM+++R+HQ+PLQC+ME+K Sbjct: 80 YSYEVAETKVTQVMDFARKHQHPLQCVMEKK 110 >gi|10442011|gb|AAG17283.1|AF254897_2 YljA [Bradyrhizobium japonicum USDA 110] Length = 97 Score = 133 bits (335), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 58/91 (63%), Positives = 73/91 (80%) Query: 48 VRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGV 107 + K + P LYRVL++ND+YTPMEFV+HVL+ FF KD E A IML VHH GIGECGV Sbjct: 7 TKVKPKTKRPNLYRVLILNDDYTPMEFVVHVLEKFFQKDVEAATKIMLHVHHHGIGECGV 66 Query: 108 YAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 + YEIAE KV QVM+++R+HQ+PLQC+ME+K Sbjct: 67 FTYEIAETKVTQVMDFARKHQHPLQCVMEKK 97 >gi|316933620|ref|YP_004108602.1| ATP-dependent Clp protease adaptor protein ClpS [Rhodopseudomonas palustris DX-1] gi|315601334|gb|ADU43869.1| ATP-dependent Clp protease adaptor protein ClpS [Rhodopseudomonas palustris DX-1] Length = 132 Score = 133 bits (334), Expect = 9e-30, Method: Compositional matrix adjust. Identities = 61/109 (55%), Positives = 78/109 (71%), Gaps = 2/109 (1%) Query: 32 MNKKGIAEFDNCLDSEVRFSSKVRV--PKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHET 89 M +G N + V +K R P LYRVL++ND+YTPMEFV+HVL+ FF D E Sbjct: 24 MAGEGGRSGPNTPSTSVITKTKPRTKRPSLYRVLILNDDYTPMEFVVHVLEKFFQMDVEA 83 Query: 90 AKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 A +ML VHH GIGECGV+ YEIAE KV QVM+++R+HQ+PLQC+ME+K Sbjct: 84 ATQVMLHVHHHGIGECGVFTYEIAETKVTQVMDFARKHQHPLQCVMEKK 132 >gi|86749515|ref|YP_486011.1| ATP-dependent Clp protease adaptor protein ClpS [Rhodopseudomonas palustris HaA2] gi|86572543|gb|ABD07100.1| ATP-dependent Clp protease adaptor protein ClpS [Rhodopseudomonas palustris HaA2] Length = 132 Score = 132 bits (333), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 62/124 (50%), Positives = 83/124 (66%), Gaps = 1/124 (0%) Query: 16 DGILALMSFIFMADSRMNKKGIAEFDNCLDSEV-RFSSKVRVPKLYRVLLVNDNYTPMEF 74 D + A + + A G A + S + + K + P LYRVL++ND+YTPMEF Sbjct: 9 DSVPASVGLSYRATRMAGDGGRAGSGSPTTSVITKVKPKTKRPNLYRVLILNDDYTPMEF 68 Query: 75 VIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCI 134 V+HVL+ FF D E A +ML VHH GIGECGV+ YEIAE KV QVM+++R+HQ+PLQC+ Sbjct: 69 VVHVLEKFFQMDIEAATKVMLHVHHHGIGECGVFTYEIAETKVTQVMDFARKHQHPLQCV 128 Query: 135 MEQK 138 ME+K Sbjct: 129 MEKK 132 >gi|118591081|ref|ZP_01548480.1| ATP-dependent Clp protease adaptor protein ClpS [Stappia aggregata IAM 12614] gi|118436157|gb|EAV42799.1| ATP-dependent Clp protease adaptor protein ClpS [Stappia aggregata IAM 12614] Length = 121 Score = 132 bits (333), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 56/82 (68%), Positives = 72/82 (87%) Query: 57 PKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMK 116 P LYRVLL+ND+YTPMEFVIHV++NFF K+ E A IML VHH G+GECG+Y+YE+AE K Sbjct: 40 PNLYRVLLLNDDYTPMEFVIHVVENFFQKNREEATRIMLHVHHHGVGECGIYSYEVAETK 99 Query: 117 VNQVMNYSRQHQYPLQCIMEQK 138 V QVM+++R+HQ+PLQC+ME+K Sbjct: 100 VTQVMDFARKHQHPLQCVMEKK 121 >gi|254474220|ref|ZP_05087611.1| ATP-dependent Clp protease adaptor protein ClpS [Pseudovibrio sp. JE062] gi|211956750|gb|EEA91959.1| ATP-dependent Clp protease adaptor protein ClpS [Pseudovibrio sp. JE062] Length = 109 Score = 132 bits (332), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 56/87 (64%), Positives = 73/87 (83%) Query: 52 SKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYE 111 K + P LYRVLL+ND+YTPMEFVIHV++ FF+ D E+A IML VHH G+GECGV+ YE Sbjct: 23 PKTKRPSLYRVLLLNDDYTPMEFVIHVVERFFHLDRESATQIMLHVHHHGVGECGVFTYE 82 Query: 112 IAEMKVNQVMNYSRQHQYPLQCIMEQK 138 +AE KV QVM+++R+HQ+PLQC+ME+K Sbjct: 83 VAETKVTQVMDFARKHQHPLQCVMEKK 109 >gi|218673814|ref|ZP_03523483.1| ATP-dependent Clp protease adaptor protein ClpS [Rhizobium etli GR56] Length = 86 Score = 132 bits (331), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 56/86 (65%), Positives = 74/86 (86%) Query: 53 KVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEI 112 K + P LYRVLL+ND+YTPMEFVIH+L+ FF KD E+A IML VH+ G+GECG++ YE+ Sbjct: 1 KTKKPNLYRVLLLNDDYTPMEFVIHILERFFQKDRESATRIMLHVHNHGVGECGIFTYEV 60 Query: 113 AEMKVNQVMNYSRQHQYPLQCIMEQK 138 AE KV+QVM+++RQHQ+PLQC+ME+K Sbjct: 61 AETKVSQVMDFARQHQHPLQCVMEKK 86 >gi|188584527|ref|YP_001927972.1| ATP-dependent Clp protease adaptor protein ClpS [Methylobacterium populi BJ001] gi|179348025|gb|ACB83437.1| ATP-dependent Clp protease adaptor protein ClpS [Methylobacterium populi BJ001] Length = 131 Score = 132 bits (331), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 55/91 (60%), Positives = 73/91 (80%) Query: 48 VRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGV 107 R + + P LYRVLL+ND+YTPMEFV+HV++ FF K HE A IM+ VHH G+GECGV Sbjct: 41 TRTKPRAKRPSLYRVLLLNDDYTPMEFVVHVVERFFNKSHEDAYQIMMHVHHNGVGECGV 100 Query: 108 YAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 + YE+AE KV QVM+++R+HQ+PLQC+ME+K Sbjct: 101 FTYEVAETKVTQVMDFARKHQHPLQCVMEKK 131 >gi|154248457|ref|YP_001419415.1| ATP-dependent Clp protease adaptor protein ClpS [Xanthobacter autotrophicus Py2] gi|154162542|gb|ABS69758.1| ATP-dependent Clp protease adaptor protein ClpS [Xanthobacter autotrophicus Py2] Length = 124 Score = 131 bits (330), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 55/90 (61%), Positives = 73/90 (81%) Query: 49 RFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVY 108 R + + P LYRVLL+ND+YTPMEFV+HVL+ FF KD + A IML VH+ G+GECGV+ Sbjct: 35 RTKPQTKRPSLYRVLLLNDDYTPMEFVVHVLERFFNKDRDQANTIMLHVHNHGVGECGVF 94 Query: 109 AYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 YE+AE KV QVM+++R+HQ+PLQC+ME+K Sbjct: 95 TYEVAETKVTQVMDFARKHQHPLQCVMEKK 124 >gi|90424816|ref|YP_533186.1| ATP-dependent Clp protease adaptor protein ClpS [Rhodopseudomonas palustris BisB18] gi|90106830|gb|ABD88867.1| ATP-dependent Clp protease adaptor protein ClpS [Rhodopseudomonas palustris BisB18] Length = 137 Score = 131 bits (329), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 56/91 (61%), Positives = 72/91 (79%) Query: 48 VRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGV 107 + K + P LYRVL++ND+YTPMEFV+HVL+ FF D E A +ML VHH GIGECGV Sbjct: 47 TKVKPKTKRPNLYRVLILNDDYTPMEFVVHVLEKFFQMDVEAATQVMLHVHHHGIGECGV 106 Query: 108 YAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 + YEIAE KV QVM+++R+HQ+PLQC+ME+K Sbjct: 107 FTYEIAETKVTQVMDFARKHQHPLQCVMEKK 137 >gi|218533142|ref|YP_002423958.1| ATP-dependent Clp protease adaptor protein ClpS [Methylobacterium chloromethanicum CM4] gi|218525445|gb|ACK86030.1| ATP-dependent Clp protease adaptor protein ClpS [Methylobacterium chloromethanicum CM4] Length = 131 Score = 131 bits (329), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 54/91 (59%), Positives = 73/91 (80%) Query: 48 VRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGV 107 R + + P LYRVLL+ND+YTPMEFV+HV++ FF K H+ A IM+ VHH G+GECGV Sbjct: 41 TRTKPRAKRPSLYRVLLLNDDYTPMEFVVHVVERFFNKSHDDAYQIMMHVHHNGVGECGV 100 Query: 108 YAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 + YE+AE KV QVM+++R+HQ+PLQC+ME+K Sbjct: 101 FTYEVAETKVTQVMDFARKHQHPLQCVMEKK 131 >gi|328543445|ref|YP_004303554.1| ATP-dependent Clp protease adaptor protein ClpS [Polymorphum gilvum SL003B-26A1] gi|326413189|gb|ADZ70252.1| ATP-dependent Clp protease adaptor protein ClpS [Polymorphum gilvum SL003B-26A1] Length = 109 Score = 130 bits (328), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 56/82 (68%), Positives = 70/82 (85%) Query: 57 PKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMK 116 P LYRVLL+ND+YTPMEFVIHV++ FF K+ E A IML VHH G+GECGVY YE+AE K Sbjct: 28 PNLYRVLLLNDDYTPMEFVIHVVERFFQKNREEATRIMLHVHHHGVGECGVYTYEVAETK 87 Query: 117 VNQVMNYSRQHQYPLQCIMEQK 138 V QVM+++R+HQ+PLQC+ME+K Sbjct: 88 VTQVMDFARKHQHPLQCVMEKK 109 >gi|163854197|ref|YP_001642240.1| ATP-dependent Clp protease adaptor protein ClpS [Methylobacterium extorquens PA1] gi|240141657|ref|YP_002966137.1| ATP-dependent Clp protease adaptor protein clpS [Methylobacterium extorquens AM1] gi|254564165|ref|YP_003071260.1| ATP-dependent Clp protease adaptor protein clpS [Methylobacterium extorquens DM4] gi|163665802|gb|ABY33169.1| ATP-dependent Clp protease adaptor protein ClpS [Methylobacterium extorquens PA1] gi|240011634|gb|ACS42860.1| ATP-dependent Clp protease adaptor protein clpS [Methylobacterium extorquens AM1] gi|254271443|emb|CAX27458.1| ATP-dependent Clp protease adaptor protein clpS [Methylobacterium extorquens DM4] Length = 112 Score = 130 bits (328), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 54/91 (59%), Positives = 73/91 (80%) Query: 48 VRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGV 107 R + + P LYRVLL+ND+YTPMEFV+HV++ FF K H+ A IM+ VHH G+GECGV Sbjct: 22 TRTKPRAKRPSLYRVLLLNDDYTPMEFVVHVVERFFNKSHDDAYQIMMHVHHNGVGECGV 81 Query: 108 YAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 + YE+AE KV QVM+++R+HQ+PLQC+ME+K Sbjct: 82 FTYEVAETKVTQVMDFARKHQHPLQCVMEKK 112 >gi|91977524|ref|YP_570183.1| ATP-dependent Clp protease adaptor protein ClpS [Rhodopseudomonas palustris BisB5] gi|91683980|gb|ABE40282.1| ATP-dependent Clp protease adaptor protein ClpS [Rhodopseudomonas palustris BisB5] Length = 109 Score = 130 bits (328), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 56/91 (61%), Positives = 72/91 (79%) Query: 48 VRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGV 107 + K + P LYRVL++ND+YTPMEFV+HVL+ FF D E A +ML VHH GIGECGV Sbjct: 19 TKVKPKTKRPNLYRVLILNDDYTPMEFVVHVLEKFFQMDVEAATQVMLHVHHHGIGECGV 78 Query: 108 YAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 + YEIAE KV QVM+++R+HQ+PLQC+ME+K Sbjct: 79 FTYEIAETKVTQVMDFARKHQHPLQCVMEKK 109 >gi|23502048|ref|NP_698175.1| ATP-dependent Clp protease adaptor protein ClpS [Brucella suis 1330] gi|62290083|ref|YP_221876.1| ATP-dependent Clp protease adaptor protein ClpS [Brucella abortus bv. 1 str. 9-941] gi|82700008|ref|YP_414582.1| ATP-dependent Clp protease adaptor protein ClpS [Brucella melitensis biovar Abortus 2308] gi|148559927|ref|YP_001259088.1| ATP-dependent Clp protease adaptor protein ClpS [Brucella ovis ATCC 25840] gi|225627638|ref|ZP_03785675.1| ATP-dependent Clp protease adapter protein clpS [Brucella ceti str. Cudo] gi|237815589|ref|ZP_04594586.1| ATP-dependent Clp protease adapter protein clpS [Brucella abortus str. 2308 A] gi|256369595|ref|YP_003107105.1| ATP-dependent Clp protease adaptor protein ClpS [Brucella microti CCM 4915] gi|297248480|ref|ZP_06932198.1| ATP-dependent Clp protease adaptor protein ClpS [Brucella abortus bv. 5 str. B3196] gi|23348003|gb|AAN30090.1| conserved hypothetical protein [Brucella suis 1330] gi|62196215|gb|AAX74515.1| conserved hypothetical protein [Brucella abortus bv. 1 str. 9-941] gi|82616109|emb|CAJ11148.1| Protein of unknown function DUF174 [Brucella melitensis biovar Abortus 2308] gi|148371184|gb|ABQ61163.1| ATP-dependent Clp protease adaptor protein ClpS [Brucella ovis ATCC 25840] gi|225617643|gb|EEH14688.1| ATP-dependent Clp protease adapter protein clpS [Brucella ceti str. Cudo] gi|237788887|gb|EEP63098.1| ATP-dependent Clp protease adapter protein clpS [Brucella abortus str. 2308 A] gi|255999757|gb|ACU48156.1| ATP-dependent Clp protease adaptor protein ClpS [Brucella microti CCM 4915] gi|297175649|gb|EFH34996.1| ATP-dependent Clp protease adaptor protein ClpS [Brucella abortus bv. 5 str. B3196] Length = 136 Score = 130 bits (327), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 57/91 (62%), Positives = 74/91 (81%) Query: 48 VRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGV 107 R K R P LYRVLL+ND+YTPMEFV+HVLQ FF K+ + A IML VH+ G+GECGV Sbjct: 46 TRTQPKTRKPSLYRVLLLNDDYTPMEFVVHVLQRFFQKNLDDATRIMLHVHNHGVGECGV 105 Query: 108 YAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 + YE+AE KV+QVM+++RQ+Q+PLQC+ME+K Sbjct: 106 FTYEVAETKVSQVMDFARQNQHPLQCVMEKK 136 >gi|39936211|ref|NP_948487.1| ATP-dependent Clp protease adaptor protein ClpS [Rhodopseudomonas palustris CGA009] gi|39650066|emb|CAE28589.1| DUF174 [Rhodopseudomonas palustris CGA009] Length = 132 Score = 130 bits (327), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 55/91 (60%), Positives = 72/91 (79%) Query: 48 VRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGV 107 + + + P LYRVL++ND+YTPMEFV+HVL+ FF D E A +ML VHH GIGECGV Sbjct: 42 TKTKPRTKRPNLYRVLILNDDYTPMEFVVHVLEKFFQMDVEAATKVMLHVHHHGIGECGV 101 Query: 108 YAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 + YEIAE KV QVM+++R+HQ+PLQC+ME+K Sbjct: 102 FTYEIAETKVTQVMDFARKHQHPLQCVMEKK 132 >gi|17987098|ref|NP_539732.1| ATP-dependent Clp protease adaptor protein ClpS [Brucella melitensis bv. 1 str. 16M] gi|17982759|gb|AAL51996.1| protein ylja [Brucella melitensis bv. 1 str. 16M] Length = 136 Score = 130 bits (327), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 57/91 (62%), Positives = 74/91 (81%) Query: 48 VRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGV 107 R K R P LYRVLL+ND+YTPMEFV+HVLQ FF K+ + A IML VH+ G+GECGV Sbjct: 46 TRTQPKTRKPSLYRVLLLNDDYTPMEFVVHVLQRFFQKNLDDATRIMLHVHNHGVGECGV 105 Query: 108 YAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 + YE+AE KV+QVM+++RQ+Q+PLQC+ME+K Sbjct: 106 FTYEVAETKVSQVMDFARQNQHPLQCVMEKK 136 >gi|225852667|ref|YP_002732900.1| ATP-dependent Clp protease adaptor protein ClpS [Brucella melitensis ATCC 23457] gi|256044825|ref|ZP_05447729.1| ATP-dependent Clp protease adaptor protein ClpS [Brucella melitensis bv. 1 str. Rev.1] gi|256113730|ref|ZP_05454534.1| ATP-dependent Clp protease adaptor protein ClpS [Brucella melitensis bv. 3 str. Ether] gi|260565575|ref|ZP_05836059.1| ATP-dependent Clp protease adapter protein clpS [Brucella melitensis bv. 1 str. 16M] gi|21542304|sp|Q8YHI3|CLPS_BRUME RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|254763811|sp|C0RJD8|CLPS_BRUMB RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|225641032|gb|ACO00946.1| ATP-dependent Clp protease adapter protein clpS [Brucella melitensis ATCC 23457] gi|260151643|gb|EEW86737.1| ATP-dependent Clp protease adapter protein clpS [Brucella melitensis bv. 1 str. 16M] gi|326409188|gb|ADZ66253.1| ATP-dependent Clp protease adaptor protein ClpS [Brucella melitensis M28] Length = 116 Score = 130 bits (327), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 57/91 (62%), Positives = 74/91 (81%) Query: 48 VRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGV 107 R K R P LYRVLL+ND+YTPMEFV+HVLQ FF K+ + A IML VH+ G+GECGV Sbjct: 26 TRTQPKTRKPSLYRVLLLNDDYTPMEFVVHVLQRFFQKNLDDATRIMLHVHNHGVGECGV 85 Query: 108 YAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 + YE+AE KV+QVM+++RQ+Q+PLQC+ME+K Sbjct: 86 FTYEVAETKVSQVMDFARQNQHPLQCVMEKK 116 >gi|161619121|ref|YP_001593008.1| ATP-dependent Clp protease adaptor protein ClpS [Brucella canis ATCC 23365] gi|163843434|ref|YP_001627838.1| ATP-dependent Clp protease adaptor protein ClpS [Brucella suis ATCC 23445] gi|189024321|ref|YP_001935089.1| Protein of unknown function DUF174 [Brucella abortus S19] gi|254689393|ref|ZP_05152647.1| ATP-dependent Clp protease adaptor protein ClpS [Brucella abortus bv. 6 str. 870] gi|254693877|ref|ZP_05155705.1| ATP-dependent Clp protease adaptor protein ClpS [Brucella abortus bv. 3 str. Tulya] gi|254697528|ref|ZP_05159356.1| ATP-dependent Clp protease adaptor protein ClpS [Brucella abortus bv. 2 str. 86/8/59] gi|254704457|ref|ZP_05166285.1| ATP-dependent Clp protease adaptor protein ClpS [Brucella suis bv. 3 str. 686] gi|254706649|ref|ZP_05168477.1| ATP-dependent Clp protease adaptor protein ClpS [Brucella pinnipedialis M163/99/10] gi|254710244|ref|ZP_05172055.1| ATP-dependent Clp protease adaptor protein ClpS [Brucella pinnipedialis B2/94] gi|254714240|ref|ZP_05176051.1| ATP-dependent Clp protease adaptor protein ClpS [Brucella ceti M644/93/1] gi|254717676|ref|ZP_05179487.1| ATP-dependent Clp protease adaptor protein ClpS [Brucella ceti M13/05/1] gi|254719232|ref|ZP_05181043.1| ATP-dependent Clp protease adaptor protein ClpS [Brucella sp. 83/13] gi|254730423|ref|ZP_05189001.1| ATP-dependent Clp protease adaptor protein ClpS [Brucella abortus bv. 4 str. 292] gi|256031738|ref|ZP_05445352.1| ATP-dependent Clp protease adaptor protein ClpS [Brucella pinnipedialis M292/94/1] gi|256061251|ref|ZP_05451402.1| ATP-dependent Clp protease adaptor protein ClpS [Brucella neotomae 5K33] gi|256159904|ref|ZP_05457626.1| ATP-dependent Clp protease adaptor protein ClpS [Brucella ceti M490/95/1] gi|256255138|ref|ZP_05460674.1| ATP-dependent Clp protease adaptor protein ClpS [Brucella ceti B1/94] gi|256257639|ref|ZP_05463175.1| ATP-dependent Clp protease adaptor protein ClpS [Brucella abortus bv. 9 str. C68] gi|260168871|ref|ZP_05755682.1| ATP-dependent Clp protease adaptor protein ClpS [Brucella sp. F5/99] gi|260546633|ref|ZP_05822372.1| ATP-dependent Clp protease adapter protein clpS [Brucella abortus NCTC 8038] gi|260754911|ref|ZP_05867259.1| ATP-dependent Clp protease adapter protein clpS [Brucella abortus bv. 6 str. 870] gi|260758128|ref|ZP_05870476.1| ATP-dependent Clp protease adapter protein clpS [Brucella abortus bv. 4 str. 292] gi|260761954|ref|ZP_05874297.1| ATP-dependent Clp protease adapter protein clpS [Brucella abortus bv. 2 str. 86/8/59] gi|260883923|ref|ZP_05895537.1| ATP-dependent Clp protease adapter protein clpS [Brucella abortus bv. 9 str. C68] gi|261219517|ref|ZP_05933798.1| ATP-dependent Clp protease adapter protein clpS [Brucella ceti M13/05/1] gi|261322012|ref|ZP_05961209.1| ATP-dependent Clp protease adapter protein clpS [Brucella ceti M644/93/1] gi|261325259|ref|ZP_05964456.1| ATP-dependent Clp protease adapter protein clpS [Brucella neotomae 5K33] gi|265984227|ref|ZP_06096962.1| ATP-dependent Clp protease adapter protein clpS [Brucella sp. 83/13] gi|265998300|ref|ZP_06110857.1| ATP-dependent Clp protease adapter protein clpS [Brucella ceti M490/95/1] gi|306837981|ref|ZP_07470839.1| ATP-dependent Clp protease adaptor protein ClpS [Brucella sp. NF 2653] gi|306841893|ref|ZP_07474573.1| ATP-dependent Clp protease adaptor protein ClpS [Brucella sp. BO2] gi|306844034|ref|ZP_07476629.1| ATP-dependent Clp protease adaptor protein ClpS [Brucella sp. BO1] gi|37077259|sp|Q8G0C9|CLPS_BRUSU RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|189082472|sp|A9M5I2|CLPS_BRUC2 RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|189082473|sp|B0CGW7|CLPS_BRUSI RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|238689379|sp|B2S618|CLPS_BRUA1 RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|161335932|gb|ABX62237.1| ATP-dependent Clp protease adaptor protein clpS [Brucella canis ATCC 23365] gi|163674157|gb|ABY38268.1| ATP-dependent Clp protease adaptor protein clpS [Brucella suis ATCC 23445] gi|189019893|gb|ACD72615.1| Protein of unknown function DUF174 [Brucella abortus S19] gi|260095683|gb|EEW79560.1| ATP-dependent Clp protease adapter protein clpS [Brucella abortus NCTC 8038] gi|260668446|gb|EEX55386.1| ATP-dependent Clp protease adapter protein clpS [Brucella abortus bv. 4 str. 292] gi|260672386|gb|EEX59207.1| ATP-dependent Clp protease adapter protein clpS [Brucella abortus bv. 2 str. 86/8/59] gi|260675019|gb|EEX61840.1| ATP-dependent Clp protease adapter protein clpS [Brucella abortus bv. 6 str. 870] gi|260873451|gb|EEX80520.1| ATP-dependent Clp protease adapter protein clpS [Brucella abortus bv. 9 str. C68] gi|260924606|gb|EEX91174.1| ATP-dependent Clp protease adapter protein clpS [Brucella ceti M13/05/1] gi|261294702|gb|EEX98198.1| ATP-dependent Clp protease adapter protein clpS [Brucella ceti M644/93/1] gi|261301239|gb|EEY04736.1| ATP-dependent Clp protease adapter protein clpS [Brucella neotomae 5K33] gi|262552768|gb|EEZ08758.1| ATP-dependent Clp protease adapter protein clpS [Brucella ceti M490/95/1] gi|264662819|gb|EEZ33080.1| ATP-dependent Clp protease adapter protein clpS [Brucella sp. 83/13] gi|306275789|gb|EFM57513.1| ATP-dependent Clp protease adaptor protein ClpS [Brucella sp. BO1] gi|306288023|gb|EFM59425.1| ATP-dependent Clp protease adaptor protein ClpS [Brucella sp. BO2] gi|306406905|gb|EFM63126.1| ATP-dependent Clp protease adaptor protein ClpS [Brucella sp. NF 2653] Length = 116 Score = 130 bits (326), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 57/91 (62%), Positives = 74/91 (81%) Query: 48 VRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGV 107 R K R P LYRVLL+ND+YTPMEFV+HVLQ FF K+ + A IML VH+ G+GECGV Sbjct: 26 TRTQPKTRKPSLYRVLLLNDDYTPMEFVVHVLQRFFQKNLDDATRIMLHVHNHGVGECGV 85 Query: 108 YAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 + YE+AE KV+QVM+++RQ+Q+PLQC+ME+K Sbjct: 86 FTYEVAETKVSQVMDFARQNQHPLQCVMEKK 116 >gi|239832059|ref|ZP_04680388.1| ATP-dependent Clp protease adapter protein clpS [Ochrobactrum intermedium LMG 3301] gi|239824326|gb|EEQ95894.1| ATP-dependent Clp protease adapter protein clpS [Ochrobactrum intermedium LMG 3301] Length = 148 Score = 130 bits (326), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 56/91 (61%), Positives = 74/91 (81%) Query: 48 VRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGV 107 R K + P LYRVLL+ND+YTPMEFV+HVLQ FF K+ + A IML VH+ G+GECGV Sbjct: 58 TRTQPKTKKPSLYRVLLLNDDYTPMEFVVHVLQRFFQKNRDDATRIMLHVHNHGVGECGV 117 Query: 108 YAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 + YE+AE KV+QVM+++RQ+Q+PLQC+ME+K Sbjct: 118 FTYEVAETKVSQVMDFARQNQHPLQCVMEKK 148 >gi|260566297|ref|ZP_05836767.1| ATP-dependent Clp protease adapter protein clpS [Brucella suis bv. 4 str. 40] gi|261214163|ref|ZP_05928444.1| ATP-dependent Clp protease adapter protein clpS [Brucella abortus bv. 3 str. Tulya] gi|261222336|ref|ZP_05936617.1| ATP-dependent Clp protease adapter protein clpS [Brucella ceti B1/94] gi|261314110|ref|ZP_05953307.1| ATP-dependent Clp protease adapter protein clpS [Brucella pinnipedialis M163/99/10] gi|261317803|ref|ZP_05957000.1| ATP-dependent Clp protease adapter protein clpS [Brucella pinnipedialis B2/94] gi|261755135|ref|ZP_05998844.1| ATP-dependent Clp protease adapter protein clpS [Brucella suis bv. 3 str. 686] gi|261758359|ref|ZP_06002068.1| ATP-dependent Clp protease adapter protein clpS [Brucella sp. F5/99] gi|265988834|ref|ZP_06101391.1| ATP-dependent Clp protease adapter protein clpS [Brucella pinnipedialis M292/94/1] gi|265991249|ref|ZP_06103806.1| ATP-dependent Clp protease adapter protein clpS [Brucella melitensis bv. 1 str. Rev.1] gi|265995085|ref|ZP_06107642.1| ATP-dependent Clp protease adapter protein clpS [Brucella melitensis bv. 3 str. Ether] gi|265999441|ref|ZP_05466371.2| ATP-dependent Clp protease adapter protein clpS [Brucella melitensis bv. 2 str. 63/9] gi|294852509|ref|ZP_06793182.1| ATP-dependent Clp protease adaptor protein ClpS [Brucella sp. NVSL 07-0026] gi|260155815|gb|EEW90895.1| ATP-dependent Clp protease adapter protein clpS [Brucella suis bv. 4 str. 40] gi|260915770|gb|EEX82631.1| ATP-dependent Clp protease adapter protein clpS [Brucella abortus bv. 3 str. Tulya] gi|260920920|gb|EEX87573.1| ATP-dependent Clp protease adapter protein clpS [Brucella ceti B1/94] gi|261297026|gb|EEY00523.1| ATP-dependent Clp protease adapter protein clpS [Brucella pinnipedialis B2/94] gi|261303136|gb|EEY06633.1| ATP-dependent Clp protease adapter protein clpS [Brucella pinnipedialis M163/99/10] gi|261738343|gb|EEY26339.1| ATP-dependent Clp protease adapter protein clpS [Brucella sp. F5/99] gi|261744888|gb|EEY32814.1| ATP-dependent Clp protease adapter protein clpS [Brucella suis bv. 3 str. 686] gi|262766198|gb|EEZ11987.1| ATP-dependent Clp protease adapter protein clpS [Brucella melitensis bv. 3 str. Ether] gi|263002033|gb|EEZ14608.1| ATP-dependent Clp protease adapter protein clpS [Brucella melitensis bv. 1 str. Rev.1] gi|263093970|gb|EEZ17904.1| ATP-dependent Clp protease adapter protein clpS [Brucella melitensis bv. 2 str. 63/9] gi|264661031|gb|EEZ31292.1| ATP-dependent Clp protease adapter protein clpS [Brucella pinnipedialis M292/94/1] gi|294821098|gb|EFG38097.1| ATP-dependent Clp protease adaptor protein ClpS [Brucella sp. NVSL 07-0026] Length = 109 Score = 130 bits (326), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 57/91 (62%), Positives = 74/91 (81%) Query: 48 VRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGV 107 R K R P LYRVLL+ND+YTPMEFV+HVLQ FF K+ + A IML VH+ G+GECGV Sbjct: 19 TRTQPKTRKPSLYRVLLLNDDYTPMEFVVHVLQRFFQKNLDDATRIMLHVHNHGVGECGV 78 Query: 108 YAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 + YE+AE KV+QVM+++RQ+Q+PLQC+ME+K Sbjct: 79 FTYEVAETKVSQVMDFARQNQHPLQCVMEKK 109 >gi|192291927|ref|YP_001992532.1| ATP-dependent Clp protease adaptor protein ClpS [Rhodopseudomonas palustris TIE-1] gi|192285676|gb|ACF02057.1| ATP-dependent Clp protease adaptor protein ClpS [Rhodopseudomonas palustris TIE-1] Length = 115 Score = 130 bits (326), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 55/91 (60%), Positives = 72/91 (79%) Query: 48 VRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGV 107 + + + P LYRVL++ND+YTPMEFV+HVL+ FF D E A +ML VHH GIGECGV Sbjct: 25 TKTKPRTKRPNLYRVLILNDDYTPMEFVVHVLEKFFQMDVEAATKVMLHVHHHGIGECGV 84 Query: 108 YAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 + YEIAE KV QVM+++R+HQ+PLQC+ME+K Sbjct: 85 FTYEIAETKVTQVMDFARKHQHPLQCVMEKK 115 >gi|67460482|sp|Q6N535|CLPS2_RHOPA RecName: Full=ATP-dependent Clp protease adapter protein ClpS 2 Length = 109 Score = 129 bits (325), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 55/91 (60%), Positives = 72/91 (79%) Query: 48 VRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGV 107 + + + P LYRVL++ND+YTPMEFV+HVL+ FF D E A +ML VHH GIGECGV Sbjct: 19 TKTKPRTKRPNLYRVLILNDDYTPMEFVVHVLEKFFQMDVEAATKVMLHVHHHGIGECGV 78 Query: 108 YAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 + YEIAE KV QVM+++R+HQ+PLQC+ME+K Sbjct: 79 FTYEIAETKVTQVMDFARKHQHPLQCVMEKK 109 >gi|153009350|ref|YP_001370565.1| ATP-dependent Clp protease adaptor protein ClpS [Ochrobactrum anthropi ATCC 49188] gi|151561238|gb|ABS14736.1| ATP-dependent Clp protease adaptor protein ClpS [Ochrobactrum anthropi ATCC 49188] Length = 124 Score = 129 bits (325), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 56/91 (61%), Positives = 74/91 (81%) Query: 48 VRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGV 107 R K + P LYRVLL+ND+YTPMEFV+HVLQ FF K+ + A IML VH+ G+GECGV Sbjct: 34 TRTQPKTKKPSLYRVLLLNDDYTPMEFVVHVLQRFFQKNQDDATRIMLHVHNHGVGECGV 93 Query: 108 YAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 + YE+AE KV+QVM+++RQ+Q+PLQC+ME+K Sbjct: 94 FTYEVAETKVSQVMDFARQNQHPLQCVMEKK 124 >gi|146341455|ref|YP_001206503.1| ATP-dependent Clp protease adaptor protein ClpS, modulator of ClpA substrate specificity [Bradyrhizobium sp. ORS278] gi|146194261|emb|CAL78283.1| ATP-dependent Clp protease adaptor protein ClpS, modulator of ClpA substrate specificity [Bradyrhizobium sp. ORS278] Length = 110 Score = 129 bits (325), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 57/91 (62%), Positives = 72/91 (79%) Query: 48 VRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGV 107 + K + P LYRVL++ND+YTPMEFV+ VL+ FF KD E A IML VHH GIGECGV Sbjct: 20 TKVKPKTKRPNLYRVLILNDDYTPMEFVVLVLEKFFNKDVEAATKIMLHVHHHGIGECGV 79 Query: 108 YAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 + YEIAE KV QVM+++R+HQ+PLQC+ME+K Sbjct: 80 FTYEIAETKVTQVMDFARKHQHPLQCVMEKK 110 >gi|254503825|ref|ZP_05115976.1| ATP-dependent Clp protease adaptor protein ClpS [Labrenzia alexandrii DFL-11] gi|222439896|gb|EEE46575.1| ATP-dependent Clp protease adaptor protein ClpS [Labrenzia alexandrii DFL-11] Length = 110 Score = 129 bits (324), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 55/82 (67%), Positives = 71/82 (86%) Query: 57 PKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMK 116 P LYRVLL+ND+YTPMEFVIHV+++FF K+ E A IML VHH G+GECG+Y YE+AE K Sbjct: 29 PNLYRVLLLNDDYTPMEFVIHVVESFFQKNREEATRIMLHVHHHGVGECGIYTYEVAETK 88 Query: 117 VNQVMNYSRQHQYPLQCIMEQK 138 V QVM+++R+HQ+PLQC+ME+K Sbjct: 89 VTQVMDFARRHQHPLQCVMEKK 110 >gi|300022147|ref|YP_003754758.1| ATP-dependent Clp protease adaptor protein ClpS [Hyphomicrobium denitrificans ATCC 51888] gi|299523968|gb|ADJ22437.1| ATP-dependent Clp protease adaptor protein ClpS [Hyphomicrobium denitrificans ATCC 51888] Length = 129 Score = 129 bits (324), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 64/124 (51%), Positives = 80/124 (64%), Gaps = 4/124 (3%) Query: 19 LALMSFIFMADSRMNKKGIAEFDNCLDSEVRFSSKVRV----PKLYRVLLVNDNYTPMEF 74 L + + I MA G D DS+ +K R P LY+VLL+ND++TPMEF Sbjct: 6 LPIAALIRMAGKDDPPNGPGRDDRDGDSKTGIVTKTRPKTKKPSLYKVLLLNDDFTPMEF 65 Query: 75 VIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCI 134 V+ VLQ FF K E A IML VHH+G+G CGVY YEIAE KV QVM++SRQH +PLQC Sbjct: 66 VVLVLQRFFNKGQEDATRIMLHVHHKGVGICGVYTYEIAETKVTQVMDFSRQHGHPLQCT 125 Query: 135 MEQK 138 ME++ Sbjct: 126 MEKE 129 >gi|115525406|ref|YP_782317.1| ATP-dependent Clp protease adaptor protein ClpS [Rhodopseudomonas palustris BisA53] gi|115519353|gb|ABJ07337.1| ATP-dependent Clp protease adaptor protein ClpS [Rhodopseudomonas palustris BisA53] Length = 109 Score = 129 bits (323), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 54/91 (59%), Positives = 72/91 (79%) Query: 48 VRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGV 107 + + + P +YRVL++ND+YTPMEFV+HVL+ FF D E A +ML VHH GIGECGV Sbjct: 19 TKTKPRTKRPSMYRVLILNDDYTPMEFVVHVLEKFFQMDVEAATKVMLHVHHHGIGECGV 78 Query: 108 YAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 + YEIAE KV QVM+++R+HQ+PLQC+ME+K Sbjct: 79 FTYEIAETKVTQVMDFARKHQHPLQCVMEKK 109 >gi|163760870|ref|ZP_02167949.1| ATP-dependent Clp protease adaptor protein ClpS [Hoeflea phototrophica DFL-43] gi|162281914|gb|EDQ32206.1| ATP-dependent Clp protease adaptor protein ClpS [Hoeflea phototrophica DFL-43] Length = 122 Score = 129 bits (323), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 58/105 (55%), Positives = 75/105 (71%) Query: 34 KKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCI 93 K G D R +V+ P LYRVLL+ND+YTPMEFVIHVL+ FF KD + A I Sbjct: 18 KTGDGGSDRGTSVITRTKPQVKKPSLYRVLLLNDDYTPMEFVIHVLERFFQKDRDQATRI 77 Query: 94 MLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 ML VH+ G+GECGV+ YE+AE KV QVM+++R + +PLQC+ME+K Sbjct: 78 MLHVHNHGVGECGVFTYEVAETKVTQVMDFARTNHHPLQCVMEKK 122 >gi|254701912|ref|ZP_05163740.1| ATP-dependent Clp protease adaptor protein ClpS [Brucella suis bv. 5 str. 513] Length = 116 Score = 129 bits (323), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 56/91 (61%), Positives = 74/91 (81%) Query: 48 VRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGV 107 R K R P LYRVLL+ND+YTPMEFV+HVLQ FF K+ + A IML VH+ G+GECG+ Sbjct: 26 TRTQPKTRKPSLYRVLLLNDDYTPMEFVVHVLQRFFQKNLDDATRIMLHVHNHGVGECGM 85 Query: 108 YAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 + YE+AE KV+QVM+++RQ+Q+PLQC+ME+K Sbjct: 86 FTYEVAETKVSQVMDFARQNQHPLQCVMEKK 116 >gi|170747222|ref|YP_001753482.1| ATP-dependent Clp protease adaptor protein ClpS [Methylobacterium radiotolerans JCM 2831] gi|170653744|gb|ACB22799.1| ATP-dependent Clp protease adaptor protein ClpS [Methylobacterium radiotolerans JCM 2831] Length = 128 Score = 129 bits (323), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 62/128 (48%), Positives = 81/128 (63%), Gaps = 10/128 (7%) Query: 11 HRVKRDGILALMSFIFMADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYT 70 HR R + A S D R N I R + + P LYRVLL+ND+YT Sbjct: 11 HRPARIAVTASGSRAPGGDDRSNTAII----------TRTKPRTKRPSLYRVLLLNDDYT 60 Query: 71 PMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYP 130 PMEFV+ V++ FF K HE A IM+ VH G+GECGV+ YE+AE KV QVM+++R+HQ+P Sbjct: 61 PMEFVVLVVERFFNKSHEDAYHIMMHVHQNGVGECGVFTYEVAETKVTQVMDFARKHQHP 120 Query: 131 LQCIMEQK 138 LQC+ME+K Sbjct: 121 LQCVMEKK 128 >gi|260459200|ref|ZP_05807455.1| ATP-dependent Clp protease adaptor protein ClpS [Mesorhizobium opportunistum WSM2075] gi|259034754|gb|EEW36010.1| ATP-dependent Clp protease adaptor protein ClpS [Mesorhizobium opportunistum WSM2075] Length = 131 Score = 129 bits (323), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 54/82 (65%), Positives = 71/82 (86%) Query: 57 PKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMK 116 P LYRVL++ND+YTPMEFV+HVL+ FF KD E A IML VH+ G+GECGVY +E+AE K Sbjct: 50 PSLYRVLILNDDYTPMEFVVHVLERFFQKDREAATRIMLHVHNHGVGECGVYTFEVAETK 109 Query: 117 VNQVMNYSRQHQYPLQCIMEQK 138 V+QVM+++RQ+Q+PLQC+ME+K Sbjct: 110 VSQVMDFARQNQHPLQCVMEKK 131 >gi|261752476|ref|ZP_05996185.1| ATP-dependent Clp protease adapter protein clpS [Brucella suis bv. 5 str. 513] gi|261742229|gb|EEY30155.1| ATP-dependent Clp protease adapter protein clpS [Brucella suis bv. 5 str. 513] Length = 109 Score = 128 bits (322), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 56/91 (61%), Positives = 74/91 (81%) Query: 48 VRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGV 107 R K R P LYRVLL+ND+YTPMEFV+HVLQ FF K+ + A IML VH+ G+GECG+ Sbjct: 19 TRTQPKTRKPSLYRVLLLNDDYTPMEFVVHVLQRFFQKNLDDATRIMLHVHNHGVGECGM 78 Query: 108 YAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 + YE+AE KV+QVM+++RQ+Q+PLQC+ME+K Sbjct: 79 FTYEVAETKVSQVMDFARQNQHPLQCVMEKK 109 >gi|319783684|ref|YP_004143160.1| ATP-dependent Clp protease adaptor protein ClpS [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317169572|gb|ADV13110.1| ATP-dependent Clp protease adaptor protein ClpS [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 122 Score = 128 bits (322), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 54/82 (65%), Positives = 71/82 (86%) Query: 57 PKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMK 116 P LYRVL++ND+YTPMEFV+HVL+ FF KD E A IML VH+ G+GECGVY +E+AE K Sbjct: 41 PSLYRVLILNDDYTPMEFVVHVLERFFQKDREAATRIMLHVHNHGVGECGVYTFEVAETK 100 Query: 117 VNQVMNYSRQHQYPLQCIMEQK 138 V+QVM+++RQ+Q+PLQC+ME+K Sbjct: 101 VSQVMDFARQNQHPLQCVMEKK 122 >gi|312113135|ref|YP_004010731.1| ATP-dependent Clp protease adaptor protein ClpS [Rhodomicrobium vannielii ATCC 17100] gi|311218264|gb|ADP69632.1| ATP-dependent Clp protease adaptor protein ClpS [Rhodomicrobium vannielii ATCC 17100] Length = 128 Score = 127 bits (320), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 57/100 (57%), Positives = 75/100 (75%), Gaps = 2/100 (2%) Query: 41 DNCLDSE--VRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVH 98 DN L + + K + P LY+VLL+ND+YTPMEFV++VL+ FF K HE A IM+ VH Sbjct: 29 DNGLKTGAVTKTRPKTKRPSLYKVLLLNDDYTPMEFVVYVLERFFNKPHEEATLIMMHVH 88 Query: 99 HQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 +G+G CGVY YE+AE KV QVMN++RQHQ+PLQC ME++ Sbjct: 89 QKGVGICGVYTYEVAETKVTQVMNFARQHQHPLQCTMEKE 128 >gi|13470855|ref|NP_102424.1| ATP-dependent Clp protease adaptor protein ClpS [Mesorhizobium loti MAFF303099] gi|21542310|sp|Q98MA3|CLPS1_RHILO RecName: Full=ATP-dependent Clp protease adapter protein ClpS 1 gi|14021598|dbj|BAB48210.1| mll0664 [Mesorhizobium loti MAFF303099] Length = 109 Score = 127 bits (320), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 54/82 (65%), Positives = 71/82 (86%) Query: 57 PKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMK 116 P LYRVL++ND+YTPMEFV+HVL+ FF KD E A IML VH+ G+GECGVY +E+AE K Sbjct: 28 PSLYRVLILNDDYTPMEFVVHVLERFFQKDREAATRIMLHVHNHGVGECGVYTFEVAETK 87 Query: 117 VNQVMNYSRQHQYPLQCIMEQK 138 V+QVM+++RQ+Q+PLQC+ME+K Sbjct: 88 VSQVMDFARQNQHPLQCVMEKK 109 >gi|217976934|ref|YP_002361081.1| ATP-dependent Clp protease adaptor protein ClpS [Methylocella silvestris BL2] gi|217502310|gb|ACK49719.1| ATP-dependent Clp protease adaptor protein ClpS [Methylocella silvestris BL2] Length = 169 Score = 127 bits (318), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 55/91 (60%), Positives = 71/91 (78%) Query: 48 VRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGV 107 R ++ R P +YRVLL+ND+YTPMEFV+ VL+ +F K E A IML VH G+GECGV Sbjct: 79 TRTKTQTRRPSMYRVLLLNDDYTPMEFVVAVLKKYFNKGPEEATRIMLHVHQHGVGECGV 138 Query: 108 YAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 + YE+AE KV QVM+Y+R+HQ+PLQCIME+K Sbjct: 139 FTYEVAETKVTQVMDYARKHQHPLQCIMEKK 169 >gi|170740498|ref|YP_001769153.1| ATP-dependent Clp protease adaptor protein ClpS [Methylobacterium sp. 4-46] gi|168194772|gb|ACA16719.1| ATP-dependent Clp protease adaptor protein ClpS [Methylobacterium sp. 4-46] Length = 142 Score = 126 bits (317), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 53/82 (64%), Positives = 68/82 (82%) Query: 57 PKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMK 116 P LYRVLL+ND+YTPMEFV+HV++ FF K E A IML VH G+GECGV+ YE+AE K Sbjct: 61 PNLYRVLLLNDDYTPMEFVVHVVERFFNKSREDATRIMLHVHQNGVGECGVFTYEVAETK 120 Query: 117 VNQVMNYSRQHQYPLQCIMEQK 138 V QVM+++R+HQ+PLQC+ME+K Sbjct: 121 VTQVMDFARKHQHPLQCVMEKK 142 >gi|182678642|ref|YP_001832788.1| ATP-dependent Clp protease adaptor protein ClpS [Beijerinckia indica subsp. indica ATCC 9039] gi|182634525|gb|ACB95299.1| ATP-dependent Clp protease adaptor protein ClpS [Beijerinckia indica subsp. indica ATCC 9039] Length = 137 Score = 126 bits (317), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 54/91 (59%), Positives = 71/91 (78%) Query: 48 VRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGV 107 R ++ R P +YRVLL+ND+YTPMEFV+ VL+ +F K E A IML VH G+GECG+ Sbjct: 47 TRPKTQTRRPSMYRVLLLNDDYTPMEFVVSVLKKYFNKGPEEATRIMLHVHQHGVGECGI 106 Query: 108 YAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 + YE+AE KV QVM+Y+R+HQ+PLQCIME+K Sbjct: 107 FTYEVAETKVTQVMDYARKHQHPLQCIMEKK 137 >gi|220920395|ref|YP_002495696.1| ATP-dependent Clp protease adaptor protein ClpS [Methylobacterium nodulans ORS 2060] gi|219945001|gb|ACL55393.1| ATP-dependent Clp protease adaptor protein ClpS [Methylobacterium nodulans ORS 2060] Length = 135 Score = 126 bits (316), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 53/82 (64%), Positives = 68/82 (82%) Query: 57 PKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMK 116 P LYRVLL+ND+YTPMEFV+HV++ FF K E A IML VH G+GECGV+ YE+AE K Sbjct: 54 PNLYRVLLLNDDYTPMEFVVHVVERFFNKSREDATRIMLHVHQNGVGECGVFTYEVAETK 113 Query: 117 VNQVMNYSRQHQYPLQCIMEQK 138 V QVM+++R+HQ+PLQC+ME+K Sbjct: 114 VTQVMDFARKHQHPLQCVMEKK 135 >gi|294013244|ref|YP_003546704.1| ATP-dependent Clp protease adaptor protein ClpS [Sphingobium japonicum UT26S] gi|292676574|dbj|BAI98092.1| ATP-dependent Clp protease adaptor protein ClpS [Sphingobium japonicum UT26S] Length = 135 Score = 124 bits (312), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 53/113 (46%), Positives = 79/113 (69%) Query: 25 IFMADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFY 84 + MA + +G + R ++ + P LY+VL++ND+YTPMEFV+HVLQ FF Sbjct: 22 VTMAGRDQDDQGDGSGGPNVGIATRTRARTKKPSLYKVLMLNDDYTPMEFVVHVLQQFFR 81 Query: 85 KDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 D E A +ML VH +G+G CG+++YE+AE KVNQVM+++RQ+Q+PLQC +E+ Sbjct: 82 MDMEEATRVMLHVHQRGVGVCGIFSYEVAETKVNQVMDFARQNQHPLQCTLEK 134 >gi|94495922|ref|ZP_01302501.1| hypothetical protein SKA58_15107 [Sphingomonas sp. SKA58] gi|94424614|gb|EAT09636.1| hypothetical protein SKA58_15107 [Sphingomonas sp. SKA58] Length = 124 Score = 123 bits (309), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 53/113 (46%), Positives = 80/113 (70%) Query: 25 IFMADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFY 84 + MA + +G + R ++ + P LY+VL++ND+YTPMEFV+HVLQ+FF Sbjct: 11 VNMAGRDQDDQGEGPGGPNVGIATRTRTRTKKPSLYKVLMLNDDYTPMEFVVHVLQSFFR 70 Query: 85 KDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 D E A +ML VH +G+G CG+++YE+AE KVNQVM+++RQ+Q+PLQC +E+ Sbjct: 71 MDMEEATRVMLHVHQRGVGICGIFSYEVAETKVNQVMDFARQNQHPLQCTLEK 123 >gi|304391581|ref|ZP_07373523.1| ATP-dependent Clp protease adapter protein ClpS 1 [Ahrensia sp. R2A130] gi|303295810|gb|EFL90168.1| ATP-dependent Clp protease adapter protein ClpS 1 [Ahrensia sp. R2A130] Length = 130 Score = 123 bits (309), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 53/91 (58%), Positives = 70/91 (76%) Query: 48 VRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGV 107 R K++ P LYRVLL+ND++TPMEFVI +L FF + E A +ML VH G+GECGV Sbjct: 40 TRTKPKLKKPSLYRVLLLNDDFTPMEFVIEILARFFQMNMEQATQVMLHVHQNGVGECGV 99 Query: 108 YAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 Y YE+AE KV QVM+++R+HQ+PLQC+ME+K Sbjct: 100 YTYEVAETKVTQVMDHARKHQHPLQCVMEKK 130 >gi|307294031|ref|ZP_07573875.1| ATP-dependent Clp protease adaptor protein ClpS [Sphingobium chlorophenolicum L-1] gi|306880182|gb|EFN11399.1| ATP-dependent Clp protease adaptor protein ClpS [Sphingobium chlorophenolicum L-1] Length = 112 Score = 123 bits (308), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 53/111 (47%), Positives = 78/111 (70%) Query: 27 MADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKD 86 MA + +G + R ++ + P LY+VL++ND+YTPMEFV+HVLQ FF D Sbjct: 1 MAGRDQDDQGDGSGGPNVGIATRTRARTKKPSLYKVLMLNDDYTPMEFVVHVLQQFFRMD 60 Query: 87 HETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 E A +ML VH +G+G CG+++YE+AE KVNQVM+++RQ+Q+PLQC +E+ Sbjct: 61 MEEATRVMLHVHQRGVGVCGIFSYEVAETKVNQVMDFARQNQHPLQCTLEK 111 >gi|209964988|ref|YP_002297903.1| ATP-dependent Clp protease adaptor protein ClpS,putative [Rhodospirillum centenum SW] gi|259491250|sp|B6INJ3|CLPS_RHOCS RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|209958454|gb|ACI99090.1| ATP-dependent Clp protease adaptor protein ClpS,putative [Rhodospirillum centenum SW] Length = 108 Score = 122 bits (306), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 51/90 (56%), Positives = 71/90 (78%) Query: 48 VRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGV 107 V+ K + P +Y+VL++ND+YTPMEFV+HVL+ FF K+ E A IML VH +G+G CGV Sbjct: 18 VKAKPKTKKPSMYKVLMLNDDYTPMEFVVHVLERFFNKNREEATRIMLHVHRRGVGVCGV 77 Query: 108 YAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 + YE+AE KV QVM+++RQHQ+PLQC +E+ Sbjct: 78 FTYEVAETKVTQVMDFARQHQHPLQCTLEK 107 >gi|163868096|ref|YP_001609300.1| ATP-dependent Clp protease adaptor protein ClpS [Bartonella tribocorum CIP 105476] gi|161017747|emb|CAK01305.1| Clp protease adaptor protein [Bartonella tribocorum CIP 105476] Length = 123 Score = 122 bits (306), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 61/109 (55%), Positives = 79/109 (72%), Gaps = 4/109 (3%) Query: 33 NKKGIAEFDNCLDSEV---RFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHET 89 N+KG +D S V + +K++ PKLYRVLL+ND+YTPM+FV+ VL+NFF K E Sbjct: 16 NEKG-KNWDEGRHSAVIIPKARAKLQKPKLYRVLLLNDDYTPMDFVVFVLKNFFKKSFEE 74 Query: 90 AKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 A IML VHH GIGECG Y YE+AEMK+ QV +RQ+++PLQC+ME K Sbjct: 75 ATRIMLNVHHNGIGECGTYTYEVAEMKIVQVRECARQNEHPLQCVMEWK 123 >gi|83593445|ref|YP_427197.1| ATP-dependent Clp protease adaptor protein ClpS [Rhodospirillum rubrum ATCC 11170] gi|83576359|gb|ABC22910.1| ATP-dependent Clp protease adaptor protein ClpS [Rhodospirillum rubrum ATCC 11170] Length = 137 Score = 122 bits (305), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 52/91 (57%), Positives = 71/91 (78%) Query: 48 VRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGV 107 V+ K + P +YRVL++ND+YTPMEFV+HVL+ FF K HE A IML VH +G+G CGV Sbjct: 47 VKAKPKTKKPSMYRVLMLNDDYTPMEFVVHVLERFFGKTHEEATNIMLHVHQRGVGLCGV 106 Query: 108 YAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 Y YE+AE KV+QVM+ +R+ Q+PLQC +E++ Sbjct: 107 YTYEVAETKVSQVMDLARRSQHPLQCTLEKE 137 >gi|296533024|ref|ZP_06895672.1| ATP-dependent Clp protease [Roseomonas cervicalis ATCC 49957] gi|296266653|gb|EFH12630.1| ATP-dependent Clp protease [Roseomonas cervicalis ATCC 49957] Length = 120 Score = 121 bits (304), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 55/110 (50%), Positives = 75/110 (68%) Query: 29 DSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHE 88 DS N G V+ + R P +Y+VL++ND+YTPMEFV+HVL+ FF K+ E Sbjct: 11 DSGQNGNGQTGDGAATGVVVKTRPRTRKPAMYKVLMLNDDYTPMEFVVHVLERFFQKNRE 70 Query: 89 TAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 A IML VH +G+G CGVY YE+AE KV QVM+ +RQ+Q+PLQC +E++ Sbjct: 71 EATRIMLHVHRRGVGVCGVYTYEVAETKVTQVMDLARQNQHPLQCTIEKE 120 >gi|148261528|ref|YP_001235655.1| ATP-dependent Clp protease adaptor protein ClpS [Acidiphilium cryptum JF-5] gi|326405016|ref|YP_004285098.1| ATP-dependent Clp protease adaptor protein ClpS [Acidiphilium multivorum AIU301] gi|146403209|gb|ABQ31736.1| ATP-dependent Clp protease adaptor protein ClpS [Acidiphilium cryptum JF-5] gi|325051878|dbj|BAJ82216.1| ATP-dependent Clp protease adaptor protein ClpS [Acidiphilium multivorum AIU301] Length = 118 Score = 121 bits (303), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 51/91 (56%), Positives = 70/91 (76%) Query: 48 VRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGV 107 R +K R P LY+VL++ND+YTPMEFV+HVL+ FF K + A+ IML VH +G+G CGV Sbjct: 28 TRTRTKTRKPSLYKVLMLNDDYTPMEFVVHVLERFFGKSRQEAERIMLHVHRRGVGVCGV 87 Query: 108 YAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 + YE+AE KV QVM+ +RQ Q+PLQC +E++ Sbjct: 88 FTYEVAETKVTQVMDLARQSQHPLQCTIEKE 118 >gi|163797886|ref|ZP_02191830.1| ATP-dependent Clp protease adaptor protein clpS [alpha proteobacterium BAL199] gi|159176848|gb|EDP61416.1| ATP-dependent Clp protease adaptor protein clpS [alpha proteobacterium BAL199] Length = 108 Score = 120 bits (302), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 49/90 (54%), Positives = 70/90 (77%) Query: 48 VRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGV 107 V+ K + P +Y+V+++ND+YTPMEFV+H+++ FF K E A IML VH +G+G CGV Sbjct: 18 VKTRPKTKKPSMYKVIMLNDDYTPMEFVVHIIERFFAKSREEATQIMLHVHQRGVGICGV 77 Query: 108 YAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 Y YE+AE KV QVM+++RQHQ+PLQC +E+ Sbjct: 78 YTYEVAETKVTQVMDFARQHQHPLQCTLEK 107 >gi|85709342|ref|ZP_01040407.1| ATP-dependent Clp protease adaptor protein ClpS [Erythrobacter sp. NAP1] gi|85688052|gb|EAQ28056.1| ATP-dependent Clp protease adaptor protein ClpS [Erythrobacter sp. NAP1] Length = 140 Score = 120 bits (302), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 56/122 (45%), Positives = 83/122 (68%), Gaps = 5/122 (4%) Query: 20 ALMSFIFMADSRMNKKGIAEFDNCLDSEVRFSSKVRV----PKLYRVLLVNDNYTPMEFV 75 A + + +AD K G ++ D D +V ++K R P Y+VL++ND+YTPMEFV Sbjct: 19 AAFAAVRLADDDEKKDGGSDTDEG-DGQVVIATKTRTKPKKPSQYKVLMLNDDYTPMEFV 77 Query: 76 IHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIM 135 + VL+ FF D E A +ML VH +G+G CG++ YE+AE KVNQVM+++RQ+Q+PLQC + Sbjct: 78 VMVLKRFFGMDLEAATRVMLHVHQKGVGVCGIFPYEVAETKVNQVMDFARQNQHPLQCTL 137 Query: 136 EQ 137 E+ Sbjct: 138 EK 139 >gi|161898748|ref|YP_191042.2| ATP-dependent Clp protease adaptor protein ClpS [Gluconobacter oxydans 621H] Length = 143 Score = 120 bits (301), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 50/90 (55%), Positives = 71/90 (78%) Query: 48 VRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGV 107 VR ++ R P +Y+VL++ND+YTPMEFV+HVL+ FF K + A IML+VH +G+G CGV Sbjct: 53 VRPRTRTRKPSMYKVLMLNDDYTPMEFVVHVLERFFAKTRDEATSIMLQVHQRGVGICGV 112 Query: 108 YAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 + YE+AE KV QVM+ +RQ+Q+PLQC +E+ Sbjct: 113 FTYEVAESKVTQVMDLARQNQHPLQCTIEK 142 >gi|67460154|sp|Q5FTB0|CLPS_GLUOX RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|58001492|gb|AAW60386.1| Hypothetical protein GOX0608 [Gluconobacter oxydans 621H] Length = 119 Score = 120 bits (300), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 50/90 (55%), Positives = 71/90 (78%) Query: 48 VRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGV 107 VR ++ R P +Y+VL++ND+YTPMEFV+HVL+ FF K + A IML+VH +G+G CGV Sbjct: 29 VRPRTRTRKPSMYKVLMLNDDYTPMEFVVHVLERFFAKTRDEATSIMLQVHQRGVGICGV 88 Query: 108 YAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 + YE+AE KV QVM+ +RQ+Q+PLQC +E+ Sbjct: 89 FTYEVAESKVTQVMDLARQNQHPLQCTIEK 118 >gi|74317254|ref|YP_314994.1| ATP-dependent Clp protease adaptor protein ClpS [Thiobacillus denitrificans ATCC 25259] gi|74056749|gb|AAZ97189.1| ATP-dependent Clp protease adaptor protein ClpS [Thiobacillus denitrificans ATCC 25259] Length = 102 Score = 120 bits (300), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 52/87 (59%), Positives = 70/87 (80%) Query: 51 SSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAY 110 ++KV+ P LY+VLL+ND+YTPMEFV+HVL+ FF D E A IMLKVH +G+G CGV+ Sbjct: 15 AAKVKPPPLYKVLLLNDDYTPMEFVVHVLRKFFGIDEERATQIMLKVHTEGVGVCGVFTR 74 Query: 111 EIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +IA KV QV++++RQHQ+PLQC ME+ Sbjct: 75 DIAHTKVEQVVDFARQHQHPLQCTMEE 101 >gi|103485996|ref|YP_615557.1| ATP-dependent Clp protease adaptor protein ClpS [Sphingopyxis alaskensis RB2256] gi|98976073|gb|ABF52224.1| ATP-dependent Clp protease adaptor protein ClpS [Sphingopyxis alaskensis RB2256] Length = 121 Score = 119 bits (299), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 52/90 (57%), Positives = 70/90 (77%) Query: 48 VRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGV 107 R +K + P +Y+VLL+ND+YTPMEFV+ VLQ FF D E A +ML VH QG+G CGV Sbjct: 31 TRTRAKPKKPSMYKVLLLNDDYTPMEFVVMVLQRFFNMDIERATQVMLHVHQQGVGVCGV 90 Query: 108 YAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 ++YE+AE KVNQVM+ +RQ+Q+PLQC +E+ Sbjct: 91 FSYEVAETKVNQVMDAARQNQHPLQCTLEK 120 >gi|121601730|ref|YP_988887.1| ATP-dependent Clp protease adaptor protein ClpS [Bartonella bacilliformis KC583] gi|120613907|gb|ABM44508.1| ATP-dependent Clp protease adaptor protein ClpS [Bartonella bacilliformis KC583] Length = 92 Score = 119 bits (298), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 52/87 (59%), Positives = 71/87 (81%) Query: 52 SKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYE 111 K++ PKLYRVLL++D+YTPM+FV+ +L+NFF K+ E A IML +HH GIGECG Y YE Sbjct: 6 QKLQKPKLYRVLLLDDDYTPMDFVVFILKNFFKKNFEEATRIMLNIHHNGIGECGTYTYE 65 Query: 112 IAEMKVNQVMNYSRQHQYPLQCIMEQK 138 +AEMK+ QVM +RQ+++PLQC++E K Sbjct: 66 VAEMKIVQVMECARQNEHPLQCVIEAK 92 >gi|330993783|ref|ZP_08317715.1| ATP-dependent Clp protease adapter protein ClpS [Gluconacetobacter sp. SXCC-1] gi|329759051|gb|EGG75563.1| ATP-dependent Clp protease adapter protein ClpS [Gluconacetobacter sp. SXCC-1] Length = 175 Score = 119 bits (297), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 51/97 (52%), Positives = 72/97 (74%) Query: 41 DNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQ 100 D +D + + R P +Y+VL++ND+YTPMEFV+HVL+ FF K+ E A IML VH + Sbjct: 78 DGMIDVVIHTRPQTRKPAMYKVLMLNDDYTPMEFVVHVLERFFQKNREEATDIMLHVHKR 137 Query: 101 GIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 G+G CGV+ YE+AE KV QVM+ +RQ+Q+PLQC +E+ Sbjct: 138 GVGVCGVFTYEVAETKVTQVMDLARQNQHPLQCTIEK 174 >gi|319408390|emb|CBI82045.1| Clp protease adaptor protein [Bartonella schoenbuchensis R1] Length = 119 Score = 119 bits (297), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 57/106 (53%), Positives = 77/106 (72%), Gaps = 2/106 (1%) Query: 33 NKKGIAEFDNCLDSEV--RFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETA 90 N+KG ++ D+ V + K + PKLYRVLL+ND+YTPM+FV+ +L++FF K E Sbjct: 14 NEKGKGWSEDKYDTIVIPQVKPKFQKPKLYRVLLLNDDYTPMDFVVFILESFFKKSFEET 73 Query: 91 KCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIME 136 IML VH G+GECGVY YE+AEMKV QVM +RQ+++PLQC+ME Sbjct: 74 TRIMLNVHQNGVGECGVYTYEVAEMKVVQVMECARQNEHPLQCVME 119 >gi|296116796|ref|ZP_06835402.1| ATP-dependent Clp protease adaptor protein ClpS [Gluconacetobacter hansenii ATCC 23769] gi|295976597|gb|EFG83369.1| ATP-dependent Clp protease adaptor protein ClpS [Gluconacetobacter hansenii ATCC 23769] Length = 134 Score = 119 bits (297), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 50/90 (55%), Positives = 69/90 (76%) Query: 48 VRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGV 107 +R + R P +Y+VL++ND+YTPMEFV+HVL+ FF K E A IML VH +G+G CGV Sbjct: 44 IRTRPQTRKPAMYKVLMLNDDYTPMEFVVHVLERFFQKSREEATDIMLHVHKRGVGVCGV 103 Query: 108 YAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 + YE+AE KV QVM+ +RQ+Q+PLQC +E+ Sbjct: 104 FTYEVAETKVTQVMDLARQNQHPLQCTIEK 133 >gi|329114968|ref|ZP_08243723.1| ATP-dependent Clp protease adapter protein ClpS [Acetobacter pomorum DM001] gi|326695411|gb|EGE47097.1| ATP-dependent Clp protease adapter protein ClpS [Acetobacter pomorum DM001] Length = 117 Score = 119 bits (297), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 51/90 (56%), Positives = 70/90 (77%) Query: 48 VRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGV 107 VR K R P +Y+VL++ND+YTPMEFV++VL+ FF K+ E A IML VH +G+G CGV Sbjct: 27 VRAKPKTRKPAMYKVLMLNDDYTPMEFVVYVLERFFQKNREEATDIMLNVHRRGVGVCGV 86 Query: 108 YAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 + YE+AE KV QVM+ +RQ+Q+PLQC +E+ Sbjct: 87 FTYEVAETKVAQVMDLARQNQHPLQCTIEK 116 >gi|288957528|ref|YP_003447869.1| ATP-dependent Clp protease adaptor protein [Azospirillum sp. B510] gi|288909836|dbj|BAI71325.1| ATP-dependent Clp protease adaptor protein [Azospirillum sp. B510] Length = 108 Score = 119 bits (297), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 50/90 (55%), Positives = 69/90 (76%) Query: 48 VRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGV 107 V+ K + P +Y+VL++ND+YTPMEFV+ VL+ FF K E A IML VH +G+G CGV Sbjct: 18 VKAKPKTKKPSMYKVLMLNDDYTPMEFVVLVLERFFSKSREEATQIMLHVHRRGVGLCGV 77 Query: 108 YAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 + YE+AE KV QVM+++RQHQ+PLQC +E+ Sbjct: 78 FTYEVAETKVTQVMDFARQHQHPLQCTLEK 107 >gi|315498280|ref|YP_004087084.1| ATP-dependent clp protease adaptor protein clps [Asticcacaulis excentricus CB 48] gi|315416292|gb|ADU12933.1| ATP-dependent Clp protease adaptor protein ClpS [Asticcacaulis excentricus CB 48] Length = 132 Score = 118 bits (296), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 54/111 (48%), Positives = 74/111 (66%), Gaps = 3/111 (2%) Query: 30 SRMNKKGIAEFDNCLDSE---VRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKD 86 +R K + + D ++ + K P LYRVL++ND+YTPMEFV++VL+ FF K Sbjct: 21 ARAPKAPVTDVDKPANAPFAVIDAKPKAAKPSLYRVLILNDDYTPMEFVVYVLERFFNKS 80 Query: 87 HETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 E A IML VH G+G CGVY YE+AE KV QV++ +R+HQ+PLQC ME+ Sbjct: 81 REDATRIMLHVHQTGVGVCGVYTYEVAETKVAQVVDMARRHQHPLQCTMEK 131 >gi|258541379|ref|YP_003186812.1| Clp protease adaptor protein ClpS [Acetobacter pasteurianus IFO 3283-01] gi|256632457|dbj|BAH98432.1| Clp protease adaptor protein ClpS [Acetobacter pasteurianus IFO 3283-01] gi|256635514|dbj|BAI01483.1| Clp protease adaptor protein ClpS [Acetobacter pasteurianus IFO 3283-03] gi|256638569|dbj|BAI04531.1| Clp protease adaptor protein ClpS [Acetobacter pasteurianus IFO 3283-07] gi|256641623|dbj|BAI07578.1| Clp protease adaptor protein ClpS [Acetobacter pasteurianus IFO 3283-22] gi|256644678|dbj|BAI10626.1| Clp protease adaptor protein ClpS [Acetobacter pasteurianus IFO 3283-26] gi|256647733|dbj|BAI13674.1| Clp protease adaptor protein ClpS [Acetobacter pasteurianus IFO 3283-32] gi|256650786|dbj|BAI16720.1| Clp protease adaptor protein ClpS [Acetobacter pasteurianus IFO 3283-01-42C] gi|256653777|dbj|BAI19704.1| Clp protease adaptor protein ClpS [Acetobacter pasteurianus IFO 3283-12] Length = 125 Score = 118 bits (296), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 51/90 (56%), Positives = 70/90 (77%) Query: 48 VRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGV 107 VR K R P +Y+VL++ND+YTPMEFV++VL+ FF K+ E A IML VH +G+G CGV Sbjct: 35 VRAKPKTRKPAMYKVLMLNDDYTPMEFVVYVLERFFQKNREEATDIMLNVHRRGVGVCGV 94 Query: 108 YAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 + YE+AE KV QVM+ +RQ+Q+PLQC +E+ Sbjct: 95 FTYEVAETKVAQVMDLARQNQHPLQCTIEK 124 >gi|144898735|emb|CAM75599.1| ATP-dependent Clp protease adaptor protein clpS [Magnetospirillum gryphiswaldense MSR-1] Length = 146 Score = 118 bits (295), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 52/97 (53%), Positives = 72/97 (74%) Query: 41 DNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQ 100 DN ++ K + P +Y+VL++ND+YTPMEFV+HVL++FF K E A IML VH + Sbjct: 49 DNQTGVVIKTRPKTKKPSMYKVLMLNDDYTPMEFVVHVLEHFFNKSREDATRIMLHVHTR 108 Query: 101 GIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 G+G CGVY YE+AE KV QVM+ +RQ+Q+PLQC +E+ Sbjct: 109 GVGICGVYTYEVAETKVTQVMDLARQNQHPLQCTIEK 145 >gi|83951021|ref|ZP_00959754.1| ATP-dependent Clp protease, adaptor protein ClpS [Roseovarius nubinhibens ISM] gi|83838920|gb|EAP78216.1| ATP-dependent Clp protease, adaptor protein ClpS [Roseovarius nubinhibens ISM] Length = 114 Score = 118 bits (295), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 54/108 (50%), Positives = 75/108 (69%) Query: 31 RMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETA 90 ++N G + D + V K + P LY+VLL+ND+YTPMEFV+HVL+ FF H A Sbjct: 7 QLNSSGQDDGDGHISVAVATRPKTKRPPLYKVLLLNDDYTPMEFVVHVLERFFGMTHAEA 66 Query: 91 KCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 IML VH +G+ GV+++EIAE KV QVM+++RQHQ+PLQC ME++ Sbjct: 67 FEIMLTVHKKGVAVVGVFSHEIAETKVAQVMDFARQHQHPLQCTMEKE 114 >gi|91774864|ref|YP_544620.1| ATP-dependent Clp protease adaptor protein ClpS [Methylobacillus flagellatus KT] gi|91708851|gb|ABE48779.1| ATP-dependent Clp protease adaptor protein ClpS [Methylobacillus flagellatus KT] Length = 128 Score = 118 bits (295), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 55/109 (50%), Positives = 79/109 (72%), Gaps = 4/109 (3%) Query: 29 DSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHE 88 D RM I DN ++ + + ++ P +Y+V+L+ND+YTPMEFV+ V+Q FF+K+ E Sbjct: 23 DQRM--ASIKHQDNLIEKTGK--ANIKPPSMYKVILLNDDYTPMEFVVDVMQRFFHKNRE 78 Query: 89 TAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 A IML+VH +G G CGVY + IAE KVNQV++Y+R+HQ+PLQC ME+ Sbjct: 79 QATQIMLQVHTEGAGVCGVYPHGIAETKVNQVISYAREHQHPLQCTMEE 127 >gi|329851348|ref|ZP_08266105.1| ATP-dependent Clp protease adaptor protein ClpS family protein [Asticcacaulis biprosthecum C19] gi|328840194|gb|EGF89766.1| ATP-dependent Clp protease adaptor protein ClpS family protein [Asticcacaulis biprosthecum C19] Length = 161 Score = 118 bits (295), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 52/90 (57%), Positives = 67/90 (74%) Query: 48 VRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGV 107 V K + P LYRVL++ND+YTPMEFV++VL+ FF K E A IML VH G+G CGV Sbjct: 71 VETKPKPQKPSLYRVLILNDDYTPMEFVVYVLERFFNKSREDATRIMLHVHQTGVGVCGV 130 Query: 108 YAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 Y YE+AE KV QV++ +R+HQ+PLQC ME+ Sbjct: 131 YTYEVAETKVAQVVDMARRHQHPLQCTMEK 160 >gi|162149242|ref|YP_001603703.1| ATP-dependent Clp protease adaptor protein ClpS [Gluconacetobacter diazotrophicus PAl 5] gi|161787819|emb|CAP57417.1| putative ATP-dependent Clp protease adaptor protein clpS [Gluconacetobacter diazotrophicus PAl 5] Length = 146 Score = 118 bits (295), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 50/90 (55%), Positives = 69/90 (76%) Query: 48 VRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGV 107 VR + R P +Y+VL++ND+YTPMEFV+HVL+ FF K + A IML VH +G+G CGV Sbjct: 56 VRTRPQTRKPAMYKVLMLNDDYTPMEFVVHVLERFFQKSRDEATDIMLHVHKRGVGVCGV 115 Query: 108 YAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 + YE+AE KV QVM+ +RQ+Q+PLQC +E+ Sbjct: 116 FTYEVAETKVTQVMDLARQNQHPLQCTIEK 145 >gi|46201030|ref|ZP_00055925.2| COG2127: Uncharacterized conserved protein [Magnetospirillum magnetotacticum MS-1] Length = 110 Score = 117 bits (294), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 49/91 (53%), Positives = 70/91 (76%) Query: 48 VRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGV 107 ++ K + P +Y+VL++ND+YTPMEFV+HVL+ FF K E A +ML VH +G+G CGV Sbjct: 20 IKTRPKTKKPSMYKVLMLNDDYTPMEFVVHVLERFFNKSREDATRVMLNVHTRGVGICGV 79 Query: 108 YAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 Y YE+AE KV QVM+ +RQ+Q+PLQC +E++ Sbjct: 80 YTYEVAETKVTQVMDLARQNQHPLQCTIEKE 110 >gi|209545021|ref|YP_002277250.1| ATP-dependent Clp protease adaptor protein ClpS [Gluconacetobacter diazotrophicus PAl 5] gi|209532698|gb|ACI52635.1| ATP-dependent Clp protease adaptor protein ClpS [Gluconacetobacter diazotrophicus PAl 5] Length = 135 Score = 117 bits (294), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 50/90 (55%), Positives = 69/90 (76%) Query: 48 VRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGV 107 VR + R P +Y+VL++ND+YTPMEFV+HVL+ FF K + A IML VH +G+G CGV Sbjct: 45 VRTRPQTRKPAMYKVLMLNDDYTPMEFVVHVLERFFQKSRDEATDIMLHVHKRGVGVCGV 104 Query: 108 YAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 + YE+AE KV QVM+ +RQ+Q+PLQC +E+ Sbjct: 105 FTYEVAETKVTQVMDLARQNQHPLQCTIEK 134 >gi|114799620|ref|YP_759751.1| ATP-dependent Clp protease, adaptor protein ClpS [Hyphomonas neptunium ATCC 15444] gi|123028220|sp|Q0C3E2|CLPS_HYPNA RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|114739794|gb|ABI77919.1| ATP-dependent Clp protease, adaptor protein ClpS [Hyphomonas neptunium ATCC 15444] Length = 118 Score = 117 bits (293), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 52/95 (54%), Positives = 72/95 (75%), Gaps = 2/95 (2%) Query: 44 LDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIG 103 L +E R +K P LYRVLL+ND+YTPMEFV+ +L+ FF + E A IML VH +G+G Sbjct: 25 LATETRIKTKK--PSLYRVLLLNDDYTPMEFVVFILERFFNRSREQATRIMLHVHQKGVG 82 Query: 104 ECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 CGVY YE+AE KV QV++ +R+H++PLQC+ME++ Sbjct: 83 LCGVYTYEVAETKVAQVLDLARRHEHPLQCVMEKE 117 >gi|83310221|ref|YP_420485.1| ATP-dependent Clp protease adaptor protein ClpS [Magnetospirillum magneticum AMB-1] gi|123542818|sp|Q2W899|CLPS_MAGSA RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|82945062|dbj|BAE49926.1| ATP-dependent Clp protease adaptor protein clpS [Magnetospirillum magneticum AMB-1] Length = 119 Score = 117 bits (293), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 49/91 (53%), Positives = 70/91 (76%) Query: 48 VRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGV 107 ++ K + P +Y+VL++ND+YTPMEFV+HVL+ FF K E A +ML VH +G+G CGV Sbjct: 29 IKTRPKTKKPSMYKVLMLNDDYTPMEFVVHVLERFFNKSREDATRVMLHVHTRGVGICGV 88 Query: 108 YAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 Y YE+AE KV QVM+ +RQ+Q+PLQC +E++ Sbjct: 89 YTYEVAETKVTQVMDLARQNQHPLQCTIEKE 119 >gi|296446322|ref|ZP_06888268.1| ATP-dependent Clp protease adaptor protein ClpS [Methylosinus trichosporium OB3b] gi|296256223|gb|EFH03304.1| ATP-dependent Clp protease adaptor protein ClpS [Methylosinus trichosporium OB3b] Length = 141 Score = 117 bits (293), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 52/82 (63%), Positives = 66/82 (80%) Query: 57 PKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMK 116 P +YRVLL+ND+YT EFV+ VL+ +F K E A IML VH+ G+GECGVY YE+AE K Sbjct: 60 PNMYRVLLLNDDYTTQEFVVIVLRKYFNKSLEEATRIMLHVHNHGVGECGVYTYEVAETK 119 Query: 117 VNQVMNYSRQHQYPLQCIMEQK 138 V QVM+Y+R+HQ+PLQCIME+K Sbjct: 120 VTQVMDYARKHQHPLQCIMEKK 141 >gi|323138622|ref|ZP_08073689.1| ATP-dependent Clp protease adaptor protein ClpS [Methylocystis sp. ATCC 49242] gi|322396110|gb|EFX98644.1| ATP-dependent Clp protease adaptor protein ClpS [Methylocystis sp. ATCC 49242] Length = 130 Score = 117 bits (292), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 52/86 (60%), Positives = 68/86 (79%) Query: 53 KVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEI 112 + R P +YRVLL+ND+YT EFV+ VL+ +F K E A IML VH+ G+GECGVY YE+ Sbjct: 45 QTRRPNMYRVLLLNDDYTTQEFVVIVLRKYFNKSVEEATRIMLHVHNHGVGECGVYTYEV 104 Query: 113 AEMKVNQVMNYSRQHQYPLQCIMEQK 138 AE KV QVM+++R+HQ+PLQCIME+K Sbjct: 105 AETKVTQVMDFARKHQHPLQCIMEKK 130 >gi|221235488|ref|YP_002517925.1| ATP-dependent Clp protease adaptor protein ClpS [Caulobacter crescentus NA1000] gi|254763812|sp|B8GZM8|CLPS_CAUCN RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|220964661|gb|ACL96017.1| ATP-dependent Clp protease adaptor protein ClpS [Caulobacter crescentus NA1000] Length = 109 Score = 117 bits (292), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 57/113 (50%), Positives = 76/113 (67%), Gaps = 7/113 (6%) Query: 27 MADSRMNKKGIAEFDNCLDSEV--RFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFY 84 MA+ + +G N + S V K + P LYRVL++ND+YTPMEFV++VL+ FF Sbjct: 1 MAERKQGGQG-----NGVGSSVVTEVKPKTQKPSLYRVLILNDDYTPMEFVVYVLERFFN 55 Query: 85 KDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 K E A IML VH G+G CGVY YE+AE KV QV++ +R+HQ+PLQC ME+ Sbjct: 56 KSREDATRIMLHVHQNGVGVCGVYTYEVAETKVAQVIDSARRHQHPLQCTMEK 108 >gi|49474301|ref|YP_032343.1| hypothetical protein BQ07060 [Bartonella quintana str. Toulouse] gi|49239805|emb|CAF26195.1| hypothetical protein BQ07060 [Bartonella quintana str. Toulouse] Length = 123 Score = 116 bits (291), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 53/90 (58%), Positives = 69/90 (76%) Query: 49 RFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVY 108 + SK++ PKLYRV L ND+YTPM+FV+ VL+NFF K E A IML VH G+GECG+Y Sbjct: 34 KMRSKLQKPKLYRVFLFNDDYTPMDFVVFVLKNFFKKSFEEATHIMLNVHQNGVGECGIY 93 Query: 109 AYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 +YE+AEMKV QV + Q+++PLQC+ME K Sbjct: 94 SYEVAEMKVIQVRECAHQNEHPLQCVMEWK 123 >gi|240850299|ref|YP_002971692.1| ATP-dependent Clp protease adaptor protein ClpS [Bartonella grahamii as4aup] gi|240267422|gb|ACS51010.1| ATP-dependent Clp protease adaptor protein ClpS [Bartonella grahamii as4aup] Length = 110 Score = 116 bits (291), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 53/87 (60%), Positives = 67/87 (77%) Query: 52 SKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYE 111 +K+ PKL RV L+ND+YTPM+FV+ VL+NFF K E A IML VHH GIGECG Y YE Sbjct: 24 AKLEKPKLCRVFLLNDDYTPMDFVVFVLKNFFKKSFEEATRIMLNVHHSGIGECGTYTYE 83 Query: 112 IAEMKVNQVMNYSRQHQYPLQCIMEQK 138 +AEMK+ QV +RQ+++PLQC+ME K Sbjct: 84 VAEMKILQVRECARQNEHPLQCVMEWK 110 >gi|49475405|ref|YP_033446.1| hypothetical protein BH06170 [Bartonella henselae str. Houston-1] gi|49238211|emb|CAF27421.1| hypothetical protein BH06170 [Bartonella henselae str. Houston-1] Length = 123 Score = 116 bits (291), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 53/90 (58%), Positives = 72/90 (80%) Query: 49 RFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVY 108 + SK++ PKLYRVLL++D+YTPM+FVI VL++FF K+ E A IML VH G+GECG+Y Sbjct: 34 KMRSKLQKPKLYRVLLLDDDYTPMDFVIFVLKSFFKKNFEEAMHIMLSVHQNGVGECGIY 93 Query: 109 AYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 YE+AEMK+ QV +RQ+++PLQC+ME K Sbjct: 94 NYEVAEMKIIQVRECARQNEHPLQCVMEWK 123 >gi|67460273|sp|Q6FZM5|CLPS_BARQU RecName: Full=ATP-dependent Clp protease adapter protein ClpS Length = 110 Score = 116 bits (290), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 53/90 (58%), Positives = 69/90 (76%) Query: 49 RFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVY 108 + SK++ PKLYRV L ND+YTPM+FV+ VL+NFF K E A IML VH G+GECG+Y Sbjct: 21 KMRSKLQKPKLYRVFLFNDDYTPMDFVVFVLKNFFKKSFEEATHIMLNVHQNGVGECGIY 80 Query: 109 AYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 +YE+AEMKV QV + Q+++PLQC+ME K Sbjct: 81 SYEVAEMKVIQVRECAHQNEHPLQCVMEWK 110 >gi|67460279|sp|Q6G5D4|CLPS_BARHE RecName: Full=ATP-dependent Clp protease adapter protein ClpS Length = 110 Score = 116 bits (290), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 53/90 (58%), Positives = 72/90 (80%) Query: 49 RFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVY 108 + SK++ PKLYRVLL++D+YTPM+FVI VL++FF K+ E A IML VH G+GECG+Y Sbjct: 21 KMRSKLQKPKLYRVLLLDDDYTPMDFVIFVLKSFFKKNFEEAMHIMLSVHQNGVGECGIY 80 Query: 109 AYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 YE+AEMK+ QV +RQ+++PLQC+ME K Sbjct: 81 NYEVAEMKIIQVRECARQNEHPLQCVMEWK 110 >gi|16126706|ref|NP_421270.1| ATP-dependent Clp protease adaptor protein ClpS [Caulobacter crescentus CB15] gi|21542323|sp|Q9A5I0|CLPS_CAUCR RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|13424016|gb|AAK24438.1| conserved hypothetical protein [Caulobacter crescentus CB15] Length = 119 Score = 116 bits (290), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 57/113 (50%), Positives = 76/113 (67%), Gaps = 7/113 (6%) Query: 27 MADSRMNKKGIAEFDNCLDSEV--RFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFY 84 MA+ + +G N + S V K + P LYRVL++ND+YTPMEFV++VL+ FF Sbjct: 11 MAERKQGGQG-----NGVGSSVVTEVKPKTQKPSLYRVLILNDDYTPMEFVVYVLERFFN 65 Query: 85 KDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 K E A IML VH G+G CGVY YE+AE KV QV++ +R+HQ+PLQC ME+ Sbjct: 66 KSREDATRIMLHVHQNGVGVCGVYTYEVAETKVAQVIDSARRHQHPLQCTMEK 118 >gi|295690174|ref|YP_003593867.1| ATP-dependent Clp protease adaptor protein ClpS [Caulobacter segnis ATCC 21756] gi|295432077|gb|ADG11249.1| ATP-dependent Clp protease adaptor protein ClpS [Caulobacter segnis ATCC 21756] Length = 109 Score = 116 bits (290), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 51/85 (60%), Positives = 66/85 (77%) Query: 53 KVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEI 112 K + P LYRVL++ND+YTPMEFV++VL+ FF K E A IML VH G+G CGVY YE+ Sbjct: 24 KTQKPSLYRVLILNDDYTPMEFVVYVLERFFNKSREDATRIMLHVHQNGVGVCGVYTYEV 83 Query: 113 AEMKVNQVMNYSRQHQYPLQCIMEQ 137 AE KV QV++ +R+HQ+PLQC ME+ Sbjct: 84 AETKVAQVIDSARRHQHPLQCTMEK 108 >gi|197104769|ref|YP_002130146.1| hypothetical protein PHZ_c1303 [Phenylobacterium zucineum HLK1] gi|238690132|sp|B4R947|CLPS_PHEZH RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|196478189|gb|ACG77717.1| conserved hypothetical protein [Phenylobacterium zucineum HLK1] Length = 109 Score = 116 bits (290), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 51/85 (60%), Positives = 66/85 (77%) Query: 53 KVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEI 112 K + P +YRVLL+ND+YTPMEFV++VL+ FF K E A IML VH G+G CGVY YE+ Sbjct: 24 KTQKPAMYRVLLLNDDYTPMEFVVYVLEQFFNKSREDATRIMLHVHQHGVGVCGVYTYEV 83 Query: 113 AEMKVNQVMNYSRQHQYPLQCIMEQ 137 AE KV QV++ +R+HQ+PLQC ME+ Sbjct: 84 AETKVAQVVDTARRHQHPLQCTMEK 108 >gi|260432448|ref|ZP_05786419.1| ATP-dependent Clp protease adaptor protein ClpS [Silicibacter lacuscaerulensis ITI-1157] gi|260416276|gb|EEX09535.1| ATP-dependent Clp protease adaptor protein ClpS [Silicibacter lacuscaerulensis ITI-1157] Length = 113 Score = 115 bits (288), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 54/112 (48%), Positives = 76/112 (67%) Query: 27 MADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKD 86 M +R G ++ D V+ K + P LY+VLL+ND+YTPMEFV+HVL+ FF Sbjct: 1 MLTARWMMAGKSDDDGDTSILVQTKPKTKRPPLYKVLLLNDDYTPMEFVVHVLERFFGMS 60 Query: 87 HETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 H A IML VH +G+ GV+++EIAE KV QVM+++R+HQ+PLQC ME++ Sbjct: 61 HAQAFEIMLTVHKKGVAVVGVFSHEIAETKVGQVMDFARRHQHPLQCTMERE 112 >gi|296283029|ref|ZP_06861027.1| ATP-dependent Clp protease adaptor protein ClpS [Citromicrobium bathyomarinum JL354] Length = 140 Score = 115 bits (288), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 50/97 (51%), Positives = 72/97 (74%), Gaps = 4/97 (4%) Query: 45 DSEVRFSSKVRV----PKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQ 100 D V ++K R P Y+VL++ND+YTPMEFV+ VL+ FF D E A +ML+VH + Sbjct: 43 DPNVGVATKTRAKPKKPSQYKVLMLNDDYTPMEFVVIVLKRFFRMDMEEATRVMLQVHQR 102 Query: 101 GIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 G+G CG++ YE+AE KVNQVM+++RQ+Q+PLQC +E+ Sbjct: 103 GVGVCGIFPYEVAETKVNQVMDFARQNQHPLQCTLEK 139 >gi|253999942|ref|YP_003052005.1| ATP-dependent Clp protease adaptor protein ClpS [Methylovorus sp. SIP3-4] gi|253986621|gb|ACT51478.1| ATP-dependent Clp protease adaptor protein ClpS [Methylovorus sp. SIP3-4] Length = 103 Score = 115 bits (288), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 49/87 (56%), Positives = 69/87 (79%) Query: 51 SSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAY 110 +++ + P +Y+V+L+ND+YTPMEFV+ V+Q FF K E A IMLKVH +G G CGVY + Sbjct: 16 TARPKPPSMYKVILLNDDYTPMEFVVEVIQRFFNKSREQATQIMLKVHTEGAGICGVYPH 75 Query: 111 EIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +IAE KVNQV+ Y+R++Q+PLQC ME+ Sbjct: 76 DIAETKVNQVLGYAREYQHPLQCAMEE 102 >gi|146276596|ref|YP_001166755.1| ATP-dependent Clp protease adaptor protein ClpS [Rhodobacter sphaeroides ATCC 17025] gi|166214741|sp|A4WPY6|CLPS_RHOS5 RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|145554837|gb|ABP69450.1| ATP-dependent Clp protease adaptor protein ClpS [Rhodobacter sphaeroides ATCC 17025] Length = 113 Score = 115 bits (288), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 53/106 (50%), Positives = 76/106 (71%), Gaps = 2/106 (1%) Query: 33 NKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKC 92 +K G D + ++ R SK + P LY+VLL+ND+YTPMEFV+HVL+ FF H A Sbjct: 10 DKTGGTGDDTSILTKTR--SKTQRPPLYKVLLLNDDYTPMEFVVHVLERFFGLSHAQAFE 67 Query: 93 IMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 IML VH +G+ GV+++E+AE KV QVM+++R+HQ+PLQC ME++ Sbjct: 68 IMLTVHKKGLAVVGVFSFEVAETKVAQVMDFARRHQHPLQCTMEKE 113 >gi|149186435|ref|ZP_01864748.1| hypothetical protein ED21_23138 [Erythrobacter sp. SD-21] gi|148830024|gb|EDL48462.1| hypothetical protein ED21_23138 [Erythrobacter sp. SD-21] Length = 121 Score = 115 bits (287), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 51/97 (52%), Positives = 72/97 (74%), Gaps = 4/97 (4%) Query: 45 DSEVRFSSKVRV----PKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQ 100 D +V ++K R P Y+VLL+ND+YTPMEFV+ VL+ FF D E A +ML VH + Sbjct: 24 DGQVAIATKTRAKPKKPSQYKVLLLNDDYTPMEFVVIVLKRFFRMDMEEATRVMLHVHQK 83 Query: 101 GIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 G+G CG++ YE+AE KVNQVM+++RQ+Q+PLQC +E+ Sbjct: 84 GVGVCGIFPYEVAETKVNQVMDFARQNQHPLQCTLEK 120 >gi|224824763|ref|ZP_03697870.1| ATP-dependent Clp protease adaptor protein ClpS [Lutiella nitroferrum 2002] gi|224603256|gb|EEG09432.1| ATP-dependent Clp protease adaptor protein ClpS [Lutiella nitroferrum 2002] Length = 102 Score = 115 bits (287), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 49/94 (52%), Positives = 73/94 (77%), Gaps = 1/94 (1%) Query: 45 DSEVRFS-SKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIG 103 D+++ S +K R P +Y+VLL+ND+YTPM+FV+ +LQ+FF+K+ E A IML+VH QG G Sbjct: 8 DAQLEASRAKTRPPSMYKVLLLNDDYTPMDFVVQILQHFFHKNREQATSIMLQVHTQGRG 67 Query: 104 ECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 CGVY ++A KV QV+ +++ HQ+PLQC+ME+ Sbjct: 68 VCGVYTKDVAATKVEQVLQFAKAHQHPLQCVMEE 101 >gi|154253238|ref|YP_001414062.1| ATP-dependent Clp protease adaptor protein ClpS [Parvibaculum lavamentivorans DS-1] gi|171769648|sp|A7HWX2|CLPS_PARL1 RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|154157188|gb|ABS64405.1| ATP-dependent Clp protease adaptor protein ClpS [Parvibaculum lavamentivorans DS-1] Length = 110 Score = 115 bits (287), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 49/81 (60%), Positives = 65/81 (80%) Query: 58 KLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKV 117 LY+VLL+ND+YTPMEFV+HVL+ FF K + A IML VH G+G CG+Y YE+AE KV Sbjct: 30 SLYKVLLLNDDYTPMEFVVHVLERFFNKGRDEATVIMLHVHQHGVGICGLYTYEVAETKV 89 Query: 118 NQVMNYSRQHQYPLQCIMEQK 138 QVM++++QHQ+PLQC ME++ Sbjct: 90 TQVMDFAQQHQHPLQCTMERE 110 >gi|77464259|ref|YP_353763.1| ATP-dependent Clp protease adaptor protein clpS [Rhodobacter sphaeroides 2.4.1] gi|126463101|ref|YP_001044215.1| ATP-dependent Clp protease adaptor protein ClpS [Rhodobacter sphaeroides ATCC 17029] gi|221640143|ref|YP_002526405.1| ATP-dependent Clp protease adapter protein clpS [Rhodobacter sphaeroides KD131] gi|77388677|gb|ABA79862.1| ATP-dependent Clp protease adaptor protein clpS [Rhodobacter sphaeroides 2.4.1] gi|126104765|gb|ABN77443.1| ATP-dependent Clp protease adaptor protein ClpS [Rhodobacter sphaeroides ATCC 17029] gi|221160924|gb|ACM01904.1| ATP-dependent Clp protease adapter protein clpS [Rhodobacter sphaeroides KD131] Length = 106 Score = 114 bits (286), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 53/106 (50%), Positives = 76/106 (71%), Gaps = 2/106 (1%) Query: 33 NKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKC 92 +K G D + ++ R SK + P LY+VLL+ND+YTPMEFV+HVL+ FF H A Sbjct: 3 DKTGGPGDDTSILTKTR--SKTQRPPLYKVLLLNDDYTPMEFVVHVLERFFGLSHAQAFE 60 Query: 93 IMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 IML VH +G+ GV+++E+AE KV QVM+++R+HQ+PLQC ME++ Sbjct: 61 IMLTVHKKGLAVVGVFSFEVAETKVAQVMDFARRHQHPLQCTMEKE 106 >gi|253997306|ref|YP_003049370.1| ATP-dependent Clp protease adaptor protein ClpS [Methylotenera mobilis JLW8] gi|253983985|gb|ACT48843.1| ATP-dependent Clp protease adaptor protein ClpS [Methylotenera mobilis JLW8] Length = 103 Score = 114 bits (286), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 54/98 (55%), Positives = 73/98 (74%), Gaps = 3/98 (3%) Query: 39 EFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVH 98 E D L EV +K ++P +++VLL+ND+YTPMEFVI V++ FF K E A IMLKVH Sbjct: 7 ENDIALKPEV---AKPKLPPMFKVLLLNDDYTPMEFVIEVIERFFNKSREQATQIMLKVH 63 Query: 99 HQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIME 136 +G G CG+Y +IAE K+NQV++Y+RQ Q+PLQCI+E Sbjct: 64 TEGAGICGIYPQDIAETKMNQVVSYARQSQHPLQCIVE 101 >gi|167647097|ref|YP_001684760.1| ATP-dependent Clp protease adaptor protein ClpS [Caulobacter sp. K31] gi|254763813|sp|B0T2L1|CLPS_CAUSK RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|167349527|gb|ABZ72262.1| ATP-dependent Clp protease adaptor protein ClpS [Caulobacter sp. K31] Length = 109 Score = 114 bits (286), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 50/85 (58%), Positives = 66/85 (77%) Query: 53 KVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEI 112 K + P LYRVL++ND+YTPMEFV++VL+ FF K E A IML VH G+G CGV+ YE+ Sbjct: 24 KTQKPSLYRVLILNDDYTPMEFVVYVLERFFNKSREDATRIMLHVHQHGVGVCGVFTYEV 83 Query: 113 AEMKVNQVMNYSRQHQYPLQCIMEQ 137 AE KV QV++ +R+HQ+PLQC ME+ Sbjct: 84 AETKVAQVIDSARRHQHPLQCTMEK 108 >gi|241762133|ref|ZP_04760216.1| ATP-dependent Clp protease adaptor protein ClpS [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|260753723|ref|YP_003226616.1| ATP-dependent Clp protease adaptor protein ClpS [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|283856536|ref|YP_163460.2| ATP-dependent Clp protease adaptor protein ClpS [Zymomonas mobilis subsp. mobilis ZM4] gi|67460185|sp|Q5NLR1|CLPS_ZYMMO RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|241373383|gb|EER62983.1| ATP-dependent Clp protease adaptor protein ClpS [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|258553086|gb|ACV76032.1| ATP-dependent Clp protease adaptor protein ClpS [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|283775543|gb|AAV90349.2| ATP-dependent Clp protease adaptor protein ClpS [Zymomonas mobilis subsp. mobilis ZM4] Length = 107 Score = 114 bits (286), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 52/104 (50%), Positives = 75/104 (72%), Gaps = 2/104 (1%) Query: 36 GIAEFDNCLDSEV--RFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCI 93 G +FD D V R + + + P+ Y+VL++ND+YTPMEFV+ LQ FF E A + Sbjct: 3 GDKDFDKDSDVTVITRTTPQTKKPQPYKVLMLNDDYTPMEFVVLCLQRFFRMGIEDATKV 62 Query: 94 MLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 ML+VH +G+G CGV+ YE+AE KVNQV++++RQHQ+PLQC +E+ Sbjct: 63 MLQVHQRGVGICGVFTYEVAETKVNQVVDFARQHQHPLQCTLEK 106 >gi|114569835|ref|YP_756515.1| ATP-dependent Clp protease adaptor protein ClpS [Maricaulis maris MCS10] gi|122316182|sp|Q0AQ60|CLPS_MARMM RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|114340297|gb|ABI65577.1| ATP-dependent Clp protease adaptor protein ClpS [Maricaulis maris MCS10] Length = 109 Score = 114 bits (286), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 56/112 (50%), Positives = 75/112 (66%), Gaps = 3/112 (2%) Query: 27 MADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKD 86 M + + + G+ E L ++ R ++K P LYRVLL+ND+YTPMEFV+ VL F K Sbjct: 1 MTERKHDDTGVEE-GTGLATKTRPATKK--PSLYRVLLLNDDYTPMEFVVEVLARIFRKS 57 Query: 87 HETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 E A IML VH G+G CGVY YE+AE KV QVM+ +R+ Q+PLQC ME++ Sbjct: 58 PEDAARIMLHVHQNGVGMCGVYTYEVAETKVAQVMDAARRAQHPLQCTMEKE 109 >gi|114765842|ref|ZP_01444935.1| ATP-dependent Clp protease, adaptor protein ClpS [Pelagibaca bermudensis HTCC2601] gi|114541841|gb|EAU44878.1| ATP-dependent Clp protease, adaptor protein ClpS [Roseovarius sp. HTCC2601] Length = 120 Score = 114 bits (285), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 51/98 (52%), Positives = 71/98 (72%) Query: 41 DNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQ 100 D D ++ K + P LY+VLL+ND+YTPMEFV+HVL+ FF H A IML VH + Sbjct: 23 DGDADVVLQTKPKTKRPPLYKVLLLNDDYTPMEFVVHVLERFFGMSHAQAFEIMLTVHKK 82 Query: 101 GIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 G+ GV+++EIAE KV QVM+++R+HQ+PLQC ME++ Sbjct: 83 GVAVVGVFSHEIAETKVGQVMDFARRHQHPLQCTMEKE 120 >gi|260426993|ref|ZP_05780972.1| ATP-dependent Clp protease adapter protein ClpS [Citreicella sp. SE45] gi|260421485|gb|EEX14736.1| ATP-dependent Clp protease adapter protein ClpS [Citreicella sp. SE45] Length = 120 Score = 114 bits (285), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 51/94 (54%), Positives = 70/94 (74%) Query: 45 DSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGE 104 D V+ K + P LY+VLL+ND+YTPMEFV+HVL+ FF H A IML VH +G+ Sbjct: 27 DVVVQTKPKTKRPPLYKVLLLNDDYTPMEFVVHVLERFFGMSHAQAFEIMLTVHKKGVAV 86 Query: 105 CGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 GV+++EIAE KV QVM+++R+HQ+PLQC ME++ Sbjct: 87 VGVFSHEIAETKVGQVMDFARRHQHPLQCTMEKE 120 >gi|295917937|gb|ADG60244.1| ATP-dependent Clp protease adaptor protein ClpS [uncultured bacterium] Length = 133 Score = 114 bits (285), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 53/123 (43%), Positives = 81/123 (65%), Gaps = 5/123 (4%) Query: 19 LALMSFIFMADSRMNKKGIAEFDNCLDSEVRFSSKVRV----PKLYRVLLVNDNYTPMEF 74 LAL+ + ++D G D +V +++ R P Y+VL++ND+YTPMEF Sbjct: 11 LALLP-VRLSDEDEGGSGPGNDDGDGQGQVGLATRTRAKPKKPSQYKVLMLNDDYTPMEF 69 Query: 75 VIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCI 134 V+ VL+ FF D E A +ML VH +G+G CG++ YE+AE KV+QVM+++RQ+Q+PLQC Sbjct: 70 VVMVLKRFFRMDLEQATRVMLHVHQRGVGVCGIFPYEVAETKVSQVMDFARQNQHPLQCT 129 Query: 135 MEQ 137 +E+ Sbjct: 130 LEK 132 >gi|329889200|ref|ZP_08267543.1| ATP-dependent Clp protease adaptor protein ClpS family protein [Brevundimonas diminuta ATCC 11568] gi|328844501|gb|EGF94065.1| ATP-dependent Clp protease adaptor protein ClpS family protein [Brevundimonas diminuta ATCC 11568] Length = 109 Score = 114 bits (285), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 51/86 (59%), Positives = 66/86 (76%) Query: 52 SKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYE 111 K++ P LYRVL++ND+YTPMEFVI+VL+ FF K E A IML VH G+G CGV+ YE Sbjct: 23 PKLQRPSLYRVLILNDDYTPMEFVIYVLERFFQKSREDATRIMLHVHQHGVGVCGVFTYE 82 Query: 112 IAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +AE KV QV+ +R+HQ+PLQC ME+ Sbjct: 83 VAETKVAQVVETARRHQHPLQCTMEK 108 >gi|114328313|ref|YP_745470.1| ATP-dependent Clp protease adaptor protein ClpS [Granulibacter bethesdensis CGDNIH1] gi|114316487|gb|ABI62547.1| ATP-dependent Clp protease adaptor protein ClpS [Granulibacter bethesdensis CGDNIH1] Length = 178 Score = 114 bits (285), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 49/85 (57%), Positives = 66/85 (77%) Query: 54 VRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIA 113 R P LY+VL++ND+YTPMEFV+HVL+ FF K E A IML VH +G+G CGV+ YE+A Sbjct: 94 TRKPSLYKVLMLNDDYTPMEFVVHVLERFFQKTREEATQIMLHVHRRGVGVCGVFTYEVA 153 Query: 114 EMKVNQVMNYSRQHQYPLQCIMEQK 138 E KV QVM+ +R +Q+PLQC +E++ Sbjct: 154 ETKVTQVMDLARHNQHPLQCTIEKE 178 >gi|302382575|ref|YP_003818398.1| ATP-dependent Clp protease adaptor protein ClpS [Brevundimonas subvibrioides ATCC 15264] gi|302193203|gb|ADL00775.1| ATP-dependent Clp protease adaptor protein ClpS [Brevundimonas subvibrioides ATCC 15264] Length = 110 Score = 114 bits (285), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 50/86 (58%), Positives = 66/86 (76%) Query: 52 SKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYE 111 K++ P LYRVL++ND+YTPMEFV++VL+ FF K E A IML VH G+G CGV+ YE Sbjct: 24 PKLQKPSLYRVLILNDDYTPMEFVVYVLERFFQKSREDATRIMLHVHQHGVGVCGVFTYE 83 Query: 112 IAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +AE KV QV+ +R+HQ+PLQC ME+ Sbjct: 84 VAETKVAQVVETARRHQHPLQCTMEK 109 >gi|213424208|pdb|3DNJ|A Chain A, The Structure Of The Caulobacter Crescentus Clps Protease Adaptor Protein In Complex With A N-End Rule Peptide gi|213424209|pdb|3DNJ|B Chain B, The Structure Of The Caulobacter Crescentus Clps Protease Adaptor Protein In Complex With A N-End Rule Peptide gi|228312130|pdb|3G19|A Chain A, The Structure Of The Caulobacter Crescentus Clps Protease Adaptor Protein In Complex With Lll Tripeptide gi|228312330|pdb|3GQ0|A Chain A, The Structure Of The Caulobacter Crescentus Clps Protease Adaptor Protein - Apo Structure With No Peptide gi|228312331|pdb|3GQ0|B Chain B, The Structure Of The Caulobacter Crescentus Clps Protease Adaptor Protein - Apo Structure With No Peptide gi|229597899|pdb|3GQ1|A Chain A, The Structure Of The Caulobacter Crescentus Clps Protease Adaptor Protein In Complex With A Wlfvqrdske Decapeptide gi|229597900|pdb|3GQ1|B Chain B, The Structure Of The Caulobacter Crescentus Clps Protease Adaptor Protein In Complex With A Wlfvqrdske Decapeptide gi|229597907|pdb|3GW1|A Chain A, The Structure Of The Caulobacter Crescentus Clps Protease Adaptor Protein In Complex With Fgg Tripeptide gi|229597908|pdb|3GW1|B Chain B, The Structure Of The Caulobacter Crescentus Clps Protease Adaptor Protein In Complex With Fgg Tripeptide Length = 85 Score = 114 bits (284), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 50/81 (61%), Positives = 64/81 (79%) Query: 57 PKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMK 116 P LYRVL++ND+YTPMEFV++VL+ FF K E A IML VH G+G CGVY YE+AE K Sbjct: 4 PSLYRVLILNDDYTPMEFVVYVLERFFNKSREDATRIMLHVHQNGVGVCGVYTYEVAETK 63 Query: 117 VNQVMNYSRQHQYPLQCIMEQ 137 V QV++ +R+HQ+PLQC ME+ Sbjct: 64 VAQVIDSARRHQHPLQCTMEK 84 >gi|297564863|ref|YP_003683835.1| ATP-dependent Clp protease adaptor protein ClpS [Meiothermus silvanus DSM 9946] gi|296849312|gb|ADH62327.1| ATP-dependent Clp protease adaptor protein ClpS [Meiothermus silvanus DSM 9946] Length = 100 Score = 113 bits (283), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 50/94 (53%), Positives = 68/94 (72%) Query: 45 DSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGE 104 D++ + S+ R P Y+VLL+ND+YTPM+FV+ VL FF K A IML+VHH+G+G Sbjct: 7 DTKTKTQSRTRTPPQYKVLLLNDDYTPMDFVVEVLMRFFRKSELEATRIMLQVHHEGVGV 66 Query: 105 CGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 CGVY +EIAE KV+QVM + + +PLQCIME + Sbjct: 67 CGVYPFEIAETKVHQVMEAAAEEGHPLQCIMEPE 100 >gi|254294360|ref|YP_003060383.1| ATP-dependent Clp protease adaptor protein ClpS [Hirschia baltica ATCC 49814] gi|254042891|gb|ACT59686.1| ATP-dependent Clp protease adaptor protein ClpS [Hirschia baltica ATCC 49814] Length = 109 Score = 113 bits (282), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 47/91 (51%), Positives = 69/91 (75%) Query: 48 VRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGV 107 R +K + P LYRVL++ND++TPMEFV+ +L++FF K E A +ML VH+ G+G CGV Sbjct: 18 TRTETKTKRPSLYRVLILNDDFTPMEFVVLILEHFFNKTREEATKVMLHVHNTGVGVCGV 77 Query: 108 YAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 + YE+AE KV QVM+ +R+ ++PLQC ME++ Sbjct: 78 FTYEVAETKVAQVMDLARRSEHPLQCTMERE 108 >gi|85374864|ref|YP_458926.1| hypothetical protein ELI_10185 [Erythrobacter litoralis HTCC2594] gi|84787947|gb|ABC64129.1| hypothetical protein ELI_10185 [Erythrobacter litoralis HTCC2594] Length = 127 Score = 112 bits (281), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 47/90 (52%), Positives = 69/90 (76%) Query: 48 VRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGV 107 + +K + P Y+VL++ND+YTPMEFV+ VL+ FF D E A +ML VH +G+G CG+ Sbjct: 37 TKTRAKPKKPSQYKVLMLNDDYTPMEFVVMVLKRFFKMDLEQATRVMLHVHQKGVGVCGI 96 Query: 108 YAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 + YE+AE KVNQVM+++RQ+Q+PLQC +E+ Sbjct: 97 FPYEVAETKVNQVMDFARQNQHPLQCTLEK 126 >gi|87198523|ref|YP_495780.1| ATP-dependent Clp protease adaptor protein ClpS [Novosphingobium aromaticivorans DSM 12444] gi|87134204|gb|ABD24946.1| ATP-dependent Clp protease adaptor protein ClpS [Novosphingobium aromaticivorans DSM 12444] Length = 126 Score = 112 bits (280), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 49/97 (50%), Positives = 72/97 (74%), Gaps = 4/97 (4%) Query: 45 DSEVRFSSKVRV----PKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQ 100 D ++ ++K R P ++VL++ND+YTPMEFV+ VL+ FF D E A +ML VH + Sbjct: 29 DEQIGIATKTRARPKKPSQFKVLMLNDDYTPMEFVVMVLKRFFNMDLEQATRVMLHVHQR 88 Query: 101 GIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 G+G CG++ YEIAE KVNQVM+++RQ+Q+PLQC +E+ Sbjct: 89 GVGVCGIFPYEIAETKVNQVMDFARQNQHPLQCTLEK 125 >gi|84685218|ref|ZP_01013117.1| ATP-dependent Clp protease adaptor protein clpS [Maritimibacter alkaliphilus HTCC2654] gi|84666950|gb|EAQ13421.1| ATP-dependent Clp protease adaptor protein clpS [Rhodobacterales bacterium HTCC2654] Length = 118 Score = 112 bits (280), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 51/91 (56%), Positives = 69/91 (75%) Query: 48 VRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGV 107 VR +K + P LY+VLL+ND++TPMEFV+ VL+ FF +H A IML VH +G+ GV Sbjct: 28 VRPKAKSKRPPLYKVLLINDDFTPMEFVVMVLERFFSMNHAQAFEIMLTVHKKGLAVVGV 87 Query: 108 YAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 ++YEIAE KVNQVM +RQ+Q+PLQC ME++ Sbjct: 88 FSYEIAETKVNQVMEMARQYQHPLQCTMERE 118 >gi|126732062|ref|ZP_01747864.1| ATP-dependent Clp protease adaptor protein ClpS [Sagittula stellata E-37] gi|126707351|gb|EBA06415.1| ATP-dependent Clp protease adaptor protein ClpS [Sagittula stellata E-37] Length = 116 Score = 112 bits (280), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 48/91 (52%), Positives = 68/91 (74%) Query: 48 VRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGV 107 + K + P LY+VLL+ND+YTPMEFV+HVL+ FF H A +ML VH +G+ GV Sbjct: 26 TKTKPKTKRPPLYKVLLLNDDYTPMEFVVHVLERFFGMTHAQAFEVMLTVHKKGVAVVGV 85 Query: 108 YAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 +++EIAE KV QVM+++R+HQ+PLQC ME++ Sbjct: 86 FSHEIAETKVGQVMDFARRHQHPLQCTMEKE 116 >gi|254509526|ref|ZP_05121593.1| ATP-dependent Clp protease adaptor protein ClpS [Rhodobacteraceae bacterium KLH11] gi|221533237|gb|EEE36225.1| ATP-dependent Clp protease adaptor protein ClpS [Rhodobacteraceae bacterium KLH11] Length = 113 Score = 112 bits (279), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 50/91 (54%), Positives = 69/91 (75%) Query: 48 VRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGV 107 V+ K + P LY+VLL+ND+YTPMEFV+HVL+ FF H A IML VH +G+ GV Sbjct: 22 VQTRPKTQRPPLYKVLLLNDDYTPMEFVVHVLERFFGMTHAQAFEIMLTVHKKGVAVVGV 81 Query: 108 YAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 +++EIAE KV QVM+++R+HQ+PLQC ME++ Sbjct: 82 FSHEIAETKVGQVMDFARRHQHPLQCTMERE 112 >gi|326388617|ref|ZP_08210210.1| ATP-dependent Clp protease adaptor protein ClpS [Novosphingobium nitrogenifigens DSM 19370] gi|326206868|gb|EGD57692.1| ATP-dependent Clp protease adaptor protein ClpS [Novosphingobium nitrogenifigens DSM 19370] Length = 118 Score = 112 bits (279), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 49/95 (51%), Positives = 73/95 (76%), Gaps = 2/95 (2%) Query: 45 DSEVRFSSKVRV--PKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGI 102 D V +++ R P ++RVL++ND+YTPMEFV+ VL+ FF+ D E A +ML VH +G+ Sbjct: 23 DGLVGIATRARPKKPSMFRVLMLNDDYTPMEFVVMVLKRFFHMDLEQATRVMLHVHQRGV 82 Query: 103 GECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 G CGV+ YEIAE KVNQVM++++Q+Q+PL+C +E+ Sbjct: 83 GVCGVFPYEIAETKVNQVMDFAKQNQHPLRCTLEK 117 >gi|260574204|ref|ZP_05842209.1| ATP-dependent Clp protease adaptor protein ClpS [Rhodobacter sp. SW2] gi|259023670|gb|EEW26961.1| ATP-dependent Clp protease adaptor protein ClpS [Rhodobacter sp. SW2] Length = 117 Score = 112 bits (279), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 51/111 (45%), Positives = 76/111 (68%), Gaps = 2/111 (1%) Query: 27 MADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKD 86 M+ +K G E D + + ++ P LY+VLL+ND+YTPMEFV+H+L+ FF + Sbjct: 8 MSGRMSDKPGGTEGDAS--TLTKTHTRTERPPLYKVLLLNDDYTPMEFVVHILERFFGLN 65 Query: 87 HETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 H A IML VH +G+ GV+++E+AE KV QVM+++R+HQ+PLQC ME+ Sbjct: 66 HAQAFEIMLTVHKKGLAVVGVFSFEVAETKVAQVMDFARRHQHPLQCTMEK 116 >gi|254486976|ref|ZP_05100181.1| ATP-dependent Clp protease adaptor protein ClpS [Roseobacter sp. GAI101] gi|214043845|gb|EEB84483.1| ATP-dependent Clp protease adaptor protein ClpS [Roseobacter sp. GAI101] Length = 113 Score = 112 bits (279), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 49/98 (50%), Positives = 72/98 (73%) Query: 41 DNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQ 100 D+ D + K + P LY+V+L+ND++TPMEFV+HVL+ FF +H A IML VH + Sbjct: 15 DDETDLLTKTKPKTKRPPLYKVMLLNDDFTPMEFVVHVLERFFGLNHAQAFEIMLTVHKK 74 Query: 101 GIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 G+ GV+++EIAE KV QVM+++R+HQ+PLQC ME++ Sbjct: 75 GLAVVGVFSHEIAETKVAQVMDFARRHQHPLQCTMEKE 112 >gi|294676717|ref|YP_003577332.1| ATP-dependent Clp protease adaptor protein ClpS [Rhodobacter capsulatus SB 1003] gi|294475537|gb|ADE84925.1| ATP-dependent Clp protease adaptor protein ClpS [Rhodobacter capsulatus SB 1003] Length = 117 Score = 112 bits (279), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 47/91 (51%), Positives = 70/91 (76%) Query: 48 VRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGV 107 V+ + + P +Y+V+L+ND+YTPMEFV+H+L+ FF H A IML VH +G+ GV Sbjct: 27 VKTAPRTARPPMYKVMLLNDDYTPMEFVVHILERFFGMTHAQAFEIMLTVHKKGLAVVGV 86 Query: 108 YAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 Y++E+AE KV+QVM++SR+HQ+PLQC ME++ Sbjct: 87 YSFEVAETKVSQVMDFSRRHQHPLQCTMEKE 117 >gi|228312133|pdb|3G1B|A Chain A, The Structure Of The M53a Mutant Of Caulobacter Crescentus Clps Protease Adaptor Protein In Complex With Wlfvqrdske Peptide gi|228312134|pdb|3G1B|B Chain B, The Structure Of The M53a Mutant Of Caulobacter Crescentus Clps Protease Adaptor Protein In Complex With Wlfvqrdske Peptide gi|290789973|pdb|3G3P|A Chain A, The Structure Of The M53a Mutant Of The Caulobacter Crescentus Clps In Complex With A Peptide Containing An Amino-Terminal Norleucine Residue gi|290789974|pdb|3G3P|B Chain B, The Structure Of The M53a Mutant Of The Caulobacter Crescentus Clps In Complex With A Peptide Containing An Amino-Terminal Norleucine Residue Length = 85 Score = 112 bits (279), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 49/81 (60%), Positives = 63/81 (77%) Query: 57 PKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMK 116 P LYRVL++ND+YTP EFV++VL+ FF K E A IML VH G+G CGVY YE+AE K Sbjct: 4 PSLYRVLILNDDYTPAEFVVYVLERFFNKSREDATRIMLHVHQNGVGVCGVYTYEVAETK 63 Query: 117 VNQVMNYSRQHQYPLQCIMEQ 137 V QV++ +R+HQ+PLQC ME+ Sbjct: 64 VAQVIDSARRHQHPLQCTMEK 84 >gi|110678604|ref|YP_681611.1| ATP-dependent Clp protease, putative [Roseobacter denitrificans OCh 114] gi|123362148|sp|Q16AR8|CLPS_ROSDO RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|109454720|gb|ABG30925.1| ATP-dependent Clp protease, putative [Roseobacter denitrificans OCh 114] Length = 113 Score = 111 bits (277), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 48/87 (55%), Positives = 68/87 (78%) Query: 52 SKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYE 111 K + P LY+VLL+ND++TPMEFV+HVL+ FF +H A IML VH +G+ GV+++E Sbjct: 26 PKTKRPPLYKVLLLNDDFTPMEFVVHVLERFFGLNHAQAFEIMLTVHKKGVAVVGVFSHE 85 Query: 112 IAEMKVNQVMNYSRQHQYPLQCIMEQK 138 IAE KV QVM+++R+HQ+PLQC ME++ Sbjct: 86 IAETKVAQVMDFARRHQHPLQCTMEKE 112 >gi|163733946|ref|ZP_02141388.1| ATP-dependent Clp protease, putative [Roseobacter litoralis Och 149] gi|161393057|gb|EDQ17384.1| ATP-dependent Clp protease, putative [Roseobacter litoralis Och 149] Length = 113 Score = 111 bits (277), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 48/87 (55%), Positives = 68/87 (78%) Query: 52 SKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYE 111 K + P LY+VLL+ND++TPMEFV+HVL+ FF +H A IML VH +G+ GV+++E Sbjct: 26 PKTKRPPLYKVLLLNDDFTPMEFVVHVLERFFGLNHAQAFEIMLTVHKKGVAVVGVFSHE 85 Query: 112 IAEMKVNQVMNYSRQHQYPLQCIMEQK 138 IAE KV QVM+++R+HQ+PLQC ME++ Sbjct: 86 IAETKVAQVMDFARRHQHPLQCTMEKE 112 >gi|53718539|ref|YP_107525.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia pseudomallei K96243] gi|53725847|ref|YP_103843.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia mallei ATCC 23344] gi|67642115|ref|ZP_00440876.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia mallei GB8 horse 4] gi|76810861|ref|YP_332526.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia pseudomallei 1710b] gi|121600243|ref|YP_991923.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia mallei SAVP1] gi|124384404|ref|YP_001027038.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia mallei NCTC 10229] gi|126440545|ref|YP_001058010.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia pseudomallei 668] gi|126448935|ref|YP_001081687.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia mallei NCTC 10247] gi|126455350|ref|YP_001065244.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia pseudomallei 1106a] gi|134281101|ref|ZP_01767810.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia pseudomallei 305] gi|167003875|ref|ZP_02269654.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia mallei PRL-20] gi|167718445|ref|ZP_02401681.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia pseudomallei DM98] gi|167737495|ref|ZP_02410269.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia pseudomallei 14] gi|167814613|ref|ZP_02446293.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia pseudomallei 91] gi|167823083|ref|ZP_02454554.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia pseudomallei 9] gi|167844644|ref|ZP_02470152.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia pseudomallei B7210] gi|167893175|ref|ZP_02480577.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia pseudomallei 7894] gi|167901629|ref|ZP_02488834.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia pseudomallei NCTC 13177] gi|167909878|ref|ZP_02496969.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia pseudomallei 112] gi|167917901|ref|ZP_02504992.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia pseudomallei BCC215] gi|217420084|ref|ZP_03451590.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia pseudomallei 576] gi|226194397|ref|ZP_03789995.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia pseudomallei Pakistan 9] gi|237811161|ref|YP_002895612.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia pseudomallei MSHR346] gi|242318006|ref|ZP_04817022.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia pseudomallei 1106b] gi|254178824|ref|ZP_04885478.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia mallei ATCC 10399] gi|254181505|ref|ZP_04888102.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia pseudomallei 1655] gi|254196779|ref|ZP_04903203.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia pseudomallei S13] gi|254202547|ref|ZP_04908910.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia mallei FMH] gi|254207884|ref|ZP_04914234.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia mallei JHU] gi|254261197|ref|ZP_04952251.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia pseudomallei 1710a] gi|254296418|ref|ZP_04963875.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia pseudomallei 406e] gi|254298242|ref|ZP_04965694.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia pseudomallei 406e] gi|67460237|sp|Q62HH7|CLPS_BURMA RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|67460244|sp|Q63WJ1|CLPS_BURPS RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|123600017|sp|Q3JV77|CLPS_BURP1 RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|158513522|sp|A3NSC3|CLPS_BURP0 RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|166214726|sp|A3MN51|CLPS_BURM7 RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|166214727|sp|A2S519|CLPS_BURM9 RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|166214728|sp|A1V120|CLPS_BURMS RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|166214729|sp|A3N6N9|CLPS_BURP6 RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|52208953|emb|CAH34892.1| conserved hypothetical protein [Burkholderia pseudomallei K96243] gi|52429270|gb|AAU49863.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia mallei ATCC 23344] gi|76580314|gb|ABA49789.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia pseudomallei 1710b] gi|121229053|gb|ABM51571.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia mallei SAVP1] gi|124292424|gb|ABN01693.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia mallei NCTC 10229] gi|126220038|gb|ABN83544.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia pseudomallei 668] gi|126228992|gb|ABN92532.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia pseudomallei 1106a] gi|126241805|gb|ABO04898.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia mallei NCTC 10247] gi|134247407|gb|EBA47492.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia pseudomallei 305] gi|147746794|gb|EDK53871.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia mallei FMH] gi|147751778|gb|EDK58845.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia mallei JHU] gi|157806177|gb|EDO83347.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia pseudomallei 406e] gi|157808080|gb|EDO85250.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia pseudomallei 406e] gi|160694738|gb|EDP84746.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia mallei ATCC 10399] gi|169653522|gb|EDS86215.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia pseudomallei S13] gi|184212043|gb|EDU09086.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia pseudomallei 1655] gi|217397388|gb|EEC37404.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia pseudomallei 576] gi|225933482|gb|EEH29471.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia pseudomallei Pakistan 9] gi|237503292|gb|ACQ95610.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia pseudomallei MSHR346] gi|238523195|gb|EEP86635.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia mallei GB8 horse 4] gi|242141245|gb|EES27647.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia pseudomallei 1106b] gi|243060669|gb|EES42855.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia mallei PRL-20] gi|254219886|gb|EET09270.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia pseudomallei 1710a] Length = 104 Score = 110 bits (276), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 51/95 (53%), Positives = 70/95 (73%), Gaps = 2/95 (2%) Query: 45 DSEV--RFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGI 102 DS V R K++ P +Y+V+L+ND++TPMEFV+ V+Q +F KD ETA IMLKVH +G Sbjct: 9 DSSVLERKEQKLKPPSMYKVVLLNDDFTPMEFVVMVVQEYFKKDRETATQIMLKVHREGR 68 Query: 103 GECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 G CGVY +IA KV QV+ ++RQ +PLQC+ME+ Sbjct: 69 GVCGVYTRDIASTKVEQVVTHARQAGHPLQCVMEE 103 >gi|325526418|gb|EGD04006.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia sp. TJI49] Length = 104 Score = 110 bits (276), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 51/95 (53%), Positives = 70/95 (73%), Gaps = 2/95 (2%) Query: 45 DSEV--RFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGI 102 DS V R K++ P +Y+V+L+ND++TPMEFV+ V+Q +F KD ETA IMLKVH +G Sbjct: 9 DSTVLERKEQKLKPPSMYKVVLLNDDFTPMEFVVMVVQEYFKKDRETATQIMLKVHREGR 68 Query: 103 GECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 G CGVY +IA KV QV+ ++RQ +PLQC+ME+ Sbjct: 69 GVCGVYTRDIASTKVEQVVTHARQAGHPLQCVMEE 103 >gi|84500364|ref|ZP_00998613.1| ATP-dependent Clp protease, adaptor protein ClpS [Oceanicola batsensis HTCC2597] gi|84391317|gb|EAQ03649.1| ATP-dependent Clp protease, adaptor protein ClpS [Oceanicola batsensis HTCC2597] Length = 121 Score = 110 bits (276), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 49/87 (56%), Positives = 67/87 (77%) Query: 52 SKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYE 111 K + P LY+VLL+ND+YTPMEFV+ VL+ FF +H A IML VH +G+ GV+++E Sbjct: 35 PKTKRPPLYKVLLLNDDYTPMEFVVAVLERFFGMNHAQAFEIMLTVHKKGVAVVGVFSHE 94 Query: 112 IAEMKVNQVMNYSRQHQYPLQCIMEQK 138 IAE KV QVM+++RQHQ+PLQC ME++ Sbjct: 95 IAETKVAQVMDFARQHQHPLQCTMEKE 121 >gi|330818077|ref|YP_004361782.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia gladioli BSR3] gi|327370470|gb|AEA61826.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia gladioli BSR3] Length = 104 Score = 110 bits (276), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 48/89 (53%), Positives = 67/89 (75%) Query: 49 RFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVY 108 R K++ P +Y+V+L+ND++TPMEFV+ V+Q +F KD ETA IMLKVH +G G CGVY Sbjct: 15 RSEQKLKPPSMYKVVLLNDDFTPMEFVVMVVQEYFKKDRETATQIMLKVHREGRGVCGVY 74 Query: 109 AYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +IA KV QV+ ++RQ +PLQC+ME+ Sbjct: 75 TRDIASTKVEQVVTHARQAGHPLQCVMEE 103 >gi|78067320|ref|YP_370089.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia sp. 383] gi|107023457|ref|YP_621784.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia cenocepacia AU 1054] gi|115352618|ref|YP_774457.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia ambifaria AMMD] gi|116690539|ref|YP_836162.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia cenocepacia HI2424] gi|134296692|ref|YP_001120427.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia vietnamiensis G4] gi|161523956|ref|YP_001578968.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia multivorans ATCC 17616] gi|167585699|ref|ZP_02378087.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia ubonensis Bu] gi|170697705|ref|ZP_02888793.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia ambifaria IOP40-10] gi|170733880|ref|YP_001765827.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia cenocepacia MC0-3] gi|171319748|ref|ZP_02908836.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia ambifaria MEX-5] gi|172061479|ref|YP_001809131.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia ambifaria MC40-6] gi|189351283|ref|YP_001946911.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia multivorans ATCC 17616] gi|206561069|ref|YP_002231834.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia cenocepacia J2315] gi|221199250|ref|ZP_03572294.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia multivorans CGD2M] gi|221205848|ref|ZP_03578863.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia multivorans CGD2] gi|221211472|ref|ZP_03584451.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia multivorans CGD1] gi|254247420|ref|ZP_04940741.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia cenocepacia PC184] gi|254251618|ref|ZP_04944936.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia dolosa AUO158] gi|122322413|sp|Q0BCK0|CLPS_BURCM RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|123371357|sp|Q1BU94|CLPS_BURCA RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|123567808|sp|Q39DM1|CLPS_BURS3 RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|166214725|sp|A0K9U2|CLPS_BURCH RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|166214730|sp|A4JH39|CLPS_BURVG RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|238687030|sp|A9AGM9|CLPS_BURM1 RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|238688602|sp|B1JXD0|CLPS_BURCC RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|238692854|sp|B1YVB1|CLPS_BURA4 RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|238693085|sp|B4E904|CLPS_BURCJ RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|77968065|gb|ABB09445.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia sp. 383] gi|105893646|gb|ABF76811.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia cenocepacia AU 1054] gi|115282606|gb|ABI88123.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia ambifaria AMMD] gi|116648628|gb|ABK09269.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia cenocepacia HI2424] gi|124872196|gb|EAY63912.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia cenocepacia PC184] gi|124894227|gb|EAY68107.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia dolosa AUO158] gi|134139849|gb|ABO55592.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia vietnamiensis G4] gi|160341385|gb|ABX14471.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia multivorans ATCC 17616] gi|169817122|gb|ACA91705.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia cenocepacia MC0-3] gi|170137453|gb|EDT05693.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia ambifaria IOP40-10] gi|171095020|gb|EDT40043.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia ambifaria MEX-5] gi|171993996|gb|ACB64915.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia ambifaria MC40-6] gi|189335305|dbj|BAG44375.1| ATP-dependent Clp protease adaptor protein [Burkholderia multivorans ATCC 17616] gi|198037111|emb|CAR53032.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia cenocepacia J2315] gi|221168833|gb|EEE01301.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia multivorans CGD1] gi|221174686|gb|EEE07118.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia multivorans CGD2] gi|221180535|gb|EEE12938.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia multivorans CGD2M] Length = 104 Score = 110 bits (276), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 51/95 (53%), Positives = 70/95 (73%), Gaps = 2/95 (2%) Query: 45 DSEV--RFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGI 102 DS V R K++ P +Y+V+L+ND++TPMEFV+ V+Q +F KD ETA IMLKVH +G Sbjct: 9 DSTVLERKQQKLKPPSMYKVVLLNDDFTPMEFVVMVVQEYFKKDRETATQIMLKVHREGR 68 Query: 103 GECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 G CGVY +IA KV QV+ ++RQ +PLQC+ME+ Sbjct: 69 GVCGVYTRDIASTKVEQVVTHARQAGHPLQCVMEE 103 >gi|83945502|ref|ZP_00957849.1| ATP-dependent Clp protease adaptor protein ClpS [Oceanicaulis alexandrii HTCC2633] gi|83851078|gb|EAP88936.1| ATP-dependent Clp protease adaptor protein ClpS [Oceanicaulis alexandrii HTCC2633] Length = 108 Score = 110 bits (275), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 49/90 (54%), Positives = 66/90 (73%) Query: 48 VRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGV 107 V+ ++ + P +Y+VLL+ND+YTPMEFVI VL F+K E A IML VH G+G CGV Sbjct: 18 VKPRARTKRPSMYKVLLLNDDYTPMEFVIEVLVRIFHKGQEDATRIMLHVHQHGVGVCGV 77 Query: 108 YAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 + YE+AE KV QVM+ +R+ Q+PLQC ME+ Sbjct: 78 FTYEVAETKVAQVMDAARRAQHPLQCTMEK 107 >gi|126031981|gb|ABN71557.1| putative ATP-dependent Clp protease adaptor protein ClpS [uncultured bacterium] Length = 131 Score = 110 bits (275), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 46/86 (53%), Positives = 67/86 (77%) Query: 52 SKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYE 111 +K + P ++VL++ND+YTPMEFV+ L+ FF D E A +ML VH +G+G CG++ YE Sbjct: 45 TKPKKPSQFKVLMLNDDYTPMEFVVMCLKRFFSMDLEQATRVMLHVHQRGVGVCGIFPYE 104 Query: 112 IAEMKVNQVMNYSRQHQYPLQCIMEQ 137 IAE KVNQVM+++RQ+Q+PLQC +E+ Sbjct: 105 IAETKVNQVMDFARQNQHPLQCTLEK 130 >gi|149913907|ref|ZP_01902439.1| ATP-dependent Clp protease, putative [Roseobacter sp. AzwK-3b] gi|149812191|gb|EDM72022.1| ATP-dependent Clp protease, putative [Roseobacter sp. AzwK-3b] Length = 107 Score = 110 bits (275), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 48/91 (52%), Positives = 70/91 (76%) Query: 48 VRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGV 107 V+ +K + P LY+VLL+ND+YTPMEFV+ VL+ FF +H A +ML VH +G+ GV Sbjct: 17 VKTRAKTKRPPLYKVLLLNDDYTPMEFVVAVLERFFGMNHAQAFEVMLTVHKKGVAVVGV 76 Query: 108 YAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 +++EIAE KV QVM+++R+HQ+PLQC ME++ Sbjct: 77 FSHEIAETKVAQVMDFARRHQHPLQCTMEKE 107 >gi|56698476|ref|YP_168851.1| ATP-dependent Clp protease, adaptor protein ClpS [Ruegeria pomeroyi DSS-3] gi|67460174|sp|Q5LMA7|CLPS_SILPO RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|56680213|gb|AAV96879.1| ATP-dependent Clp protease, adaptor protein ClpS [Ruegeria pomeroyi DSS-3] Length = 113 Score = 110 bits (274), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 50/96 (52%), Positives = 72/96 (75%), Gaps = 2/96 (2%) Query: 45 DSEVRFSSKVRV--PKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGI 102 D+ V ++ R P LY+VLL+ND+YTPMEFV+HVL+ FF +H A IML VH +G+ Sbjct: 17 DASVLLQTRPRTKRPPLYKVLLLNDDYTPMEFVVHVLERFFGMNHAQAFEIMLTVHKKGV 76 Query: 103 GECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 GV+++EIAE KV+ VM+++R+HQ+PLQC ME++ Sbjct: 77 AVVGVFSHEIAETKVSLVMDFARRHQHPLQCTMEKE 112 >gi|167835724|ref|ZP_02462607.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia thailandensis MSMB43] Length = 104 Score = 110 bits (274), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 50/95 (52%), Positives = 70/95 (73%), Gaps = 2/95 (2%) Query: 45 DSEV--RFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGI 102 DS V R K++ P +Y+V+L+ND++TPMEFV+ ++Q +F KD ETA IMLKVH +G Sbjct: 9 DSTVLERKEQKLKPPSMYKVVLLNDDFTPMEFVVMIVQEYFRKDRETATQIMLKVHREGR 68 Query: 103 GECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 G CGVY +IA KV QV+ ++RQ +PLQC+ME+ Sbjct: 69 GVCGVYTRDIASTKVEQVVTHARQAGHPLQCVMEE 103 >gi|118594453|ref|ZP_01551800.1| ATP-dependent Clp protease adaptor protein ClpS [Methylophilales bacterium HTCC2181] gi|118440231|gb|EAV46858.1| ATP-dependent Clp protease adaptor protein ClpS [Methylophilales bacterium HTCC2181] Length = 103 Score = 110 bits (274), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 45/86 (52%), Positives = 68/86 (79%) Query: 52 SKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYE 111 +K ++P LY+V+++ND+YTPMEFV+ +Q F K H+ A IMLK+H +GIG CG++ E Sbjct: 17 TKPKLPSLYKVIILNDDYTPMEFVVFSIQKVFQKSHDEATRIMLKIHTEGIGVCGMFPLE 76 Query: 112 IAEMKVNQVMNYSRQHQYPLQCIMEQ 137 IAE K+ QV+N +++HQ+PLQCI+E+ Sbjct: 77 IAETKMKQVLNLAKEHQHPLQCIIEK 102 >gi|119944513|ref|YP_942193.1| ATP-dependent Clp protease adaptor protein ClpS [Psychromonas ingrahamii 37] gi|119863117|gb|ABM02594.1| ATP-dependent Clp protease adaptor protein ClpS [Psychromonas ingrahamii 37] Length = 108 Score = 110 bits (274), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 52/107 (48%), Positives = 76/107 (71%) Query: 32 MNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAK 91 M+ K + N D+ + +K+R P +Y VLL ND+YTPM+FVI VLQ FF D++ A Sbjct: 1 MSDKKAPKTVNKSDTIEKVETKLRPPSMYNVLLHNDDYTPMDFVIDVLQQFFRLDNQKAT 60 Query: 92 CIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 +ML VH++ +G CG ++ EIAE KV QVMNY+RQ+++PL+C ME++ Sbjct: 61 EVMLNVHYKEVGICGTFSAEIAETKVMQVMNYARQNEHPLRCSMEKE 107 >gi|83721401|ref|YP_441318.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia thailandensis E264] gi|167561846|ref|ZP_02354762.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia oklahomensis EO147] gi|167569069|ref|ZP_02361943.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia oklahomensis C6786] gi|167580102|ref|ZP_02372976.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia thailandensis TXDOH] gi|167618167|ref|ZP_02386798.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia thailandensis Bt4] gi|257140007|ref|ZP_05588269.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia thailandensis E264] gi|123537862|sp|Q2T0I1|CLPS_BURTA RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|83655226|gb|ABC39289.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia thailandensis E264] Length = 104 Score = 110 bits (274), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 50/95 (52%), Positives = 70/95 (73%), Gaps = 2/95 (2%) Query: 45 DSEV--RFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGI 102 DS V R K++ P +Y+V+L+ND++TPMEFV+ ++Q +F KD ETA IMLKVH +G Sbjct: 9 DSTVLERKEQKLKPPSMYKVVLLNDDFTPMEFVVMIVQEYFKKDRETATQIMLKVHREGR 68 Query: 103 GECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 G CGVY +IA KV QV+ ++RQ +PLQC+ME+ Sbjct: 69 GVCGVYTRDIASTKVEQVVTHARQAGHPLQCVMEE 103 >gi|71908707|ref|YP_286294.1| ATP-dependent Clp protease adaptor protein ClpS [Dechloromonas aromatica RCB] gi|123626787|sp|Q47BF7|CLPS_DECAR RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|71848328|gb|AAZ47824.1| ATP-dependent Clp protease adaptor protein ClpS [Dechloromonas aromatica RCB] Length = 102 Score = 110 bits (274), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 50/86 (58%), Positives = 66/86 (76%) Query: 52 SKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYE 111 S++ PK+Y+V+L+ND+YTPM+FVI VLQ FF D E A IMLKVH++G G CGV+ + Sbjct: 16 SRLGPPKMYKVVLLNDDYTPMDFVITVLQRFFSLDTEQATRIMLKVHNEGRGVCGVFPRD 75 Query: 112 IAEMKVNQVMNYSRQHQYPLQCIMEQ 137 IA KV QV ++RQHQ+PL CIME+ Sbjct: 76 IAATKVEQVSAFARQHQHPLACIMEE 101 >gi|89069767|ref|ZP_01157103.1| ATP-dependent Clp protease adaptor protein clpS [Oceanicola granulosus HTCC2516] gi|89044713|gb|EAR50824.1| ATP-dependent Clp protease adaptor protein clpS [Oceanicola granulosus HTCC2516] Length = 113 Score = 110 bits (274), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 49/100 (49%), Positives = 73/100 (73%), Gaps = 2/100 (2%) Query: 41 DNCLDSEVRFSS--KVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVH 98 D D+ V+ + K + P LY+VL++ND+YTPMEFV+HVL+ FF H A +ML VH Sbjct: 14 DGGTDAGVKVETRPKTKRPPLYKVLILNDDYTPMEFVVHVLERFFGLSHAQAFDLMLTVH 73 Query: 99 HQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 +G+ GV+++EIAE KV QVM+++++HQ+PLQC ME++ Sbjct: 74 KKGLAVVGVFSFEIAETKVAQVMDFAQRHQHPLQCTMEKE 113 >gi|119897424|ref|YP_932637.1| ATP-dependent Clp protease adaptor protein ClpS [Azoarcus sp. BH72] gi|166214724|sp|A1K4J5|CLPS_AZOSB RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|119669837|emb|CAL93750.1| ClpS protein [Azoarcus sp. BH72] Length = 102 Score = 110 bits (274), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 46/86 (53%), Positives = 67/86 (77%) Query: 52 SKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYE 111 ++ R P LY+VLL+ND++TPM+FVI VLQ +F D E A +ML+VH +G+G CGV+ + Sbjct: 16 TRTRPPPLYKVLLLNDDFTPMDFVIVVLQKYFSMDRERATRVMLQVHREGMGVCGVFPRD 75 Query: 112 IAEMKVNQVMNYSRQHQYPLQCIMEQ 137 IA KV QV++++RQHQ+PL C+ME+ Sbjct: 76 IASTKVEQVVSFARQHQHPLACVMEE 101 >gi|148553784|ref|YP_001261366.1| ATP-dependent Clp protease adaptor protein ClpS [Sphingomonas wittichii RW1] gi|148498974|gb|ABQ67228.1| ATP-dependent Clp protease adaptor protein ClpS [Sphingomonas wittichii RW1] Length = 131 Score = 110 bits (274), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 49/120 (40%), Positives = 78/120 (65%) Query: 18 ILALMSFIFMADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIH 77 I++ +F +K + L R ++ + P Y+VL++ND+YTPMEFV+ Sbjct: 11 IMSHSAFTTAPTGMATRKDGDDNGTGLGLATRTRTRTKKPSPYKVLMLNDDYTPMEFVVL 70 Query: 78 VLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 LQ FF + E A +ML VH +G+G CGV++YE+AE KV+QV++++RQ+Q+PLQC +E+ Sbjct: 71 CLQRFFRMNLEDATRVMLHVHQKGVGVCGVFSYEVAETKVSQVVDFARQNQHPLQCTLEK 130 >gi|238028418|ref|YP_002912649.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia glumae BGR1] gi|237877612|gb|ACR29945.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia glumae BGR1] Length = 104 Score = 109 bits (273), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 47/89 (52%), Positives = 67/89 (75%) Query: 49 RFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVY 108 R K++ P +Y+V+L+ND++TPMEFV+ V+Q +F KD ETA IML+VH +G G CGVY Sbjct: 15 RSEQKLKPPSMYKVVLLNDDFTPMEFVVMVVQEYFKKDRETATQIMLRVHREGRGVCGVY 74 Query: 109 AYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +IA KV QV+ ++RQ +PLQC+ME+ Sbjct: 75 TRDIASTKVEQVVTHARQAGHPLQCVMEE 103 >gi|187925140|ref|YP_001896782.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia phytofirmans PsJN] gi|238689617|sp|B2T6J4|CLPS_BURPP RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|187716334|gb|ACD17558.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia phytofirmans PsJN] Length = 104 Score = 109 bits (272), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 47/89 (52%), Positives = 67/89 (75%) Query: 49 RFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVY 108 R K++ P +Y+V+L+ND++TPMEFV+ V+Q +F KD ETA +MLKVH +G G CGVY Sbjct: 15 RQEKKLKPPSMYKVVLLNDDFTPMEFVVMVVQEYFNKDRETATQVMLKVHREGRGVCGVY 74 Query: 109 AYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +IA KV QV+ ++RQ +PLQC+ME+ Sbjct: 75 TRDIASTKVEQVVTHARQAGHPLQCVMEE 103 >gi|300310730|ref|YP_003774822.1| ATP-dependent Clp protease adaptor protein [Herbaspirillum seropedicae SmR1] gi|300073515|gb|ADJ62914.1| ATP-dependent Clp protease adaptor protein [Herbaspirillum seropedicae SmR1] Length = 104 Score = 109 bits (272), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 49/89 (55%), Positives = 66/89 (74%) Query: 49 RFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVY 108 R SK++ P +Y+VLL+ND+YTPMEFV+ V+Q +F KD ETA IMLKVH G G CGVY Sbjct: 15 RQESKLKPPPMYQVLLLNDDYTPMEFVVAVIQQYFNKDRETATQIMLKVHRDGKGMCGVY 74 Query: 109 AYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +IA KV V+ ++R+ +PLQC+ME+ Sbjct: 75 PKDIASTKVELVLTHARKAGHPLQCVMEE 103 >gi|89056376|ref|YP_511827.1| ATP-dependent Clp protease adaptor protein ClpS [Jannaschia sp. CCS1] gi|88865925|gb|ABD56802.1| ATP-dependent Clp protease adaptor protein ClpS [Jannaschia sp. CCS1] Length = 116 Score = 109 bits (272), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 52/113 (46%), Positives = 76/113 (67%), Gaps = 3/113 (2%) Query: 26 FMADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYK 85 MAD N G D + + +K + P +Y+V+L+ND+YTPMEFV+HVL+ FF Sbjct: 6 MMADEPDNVDG---GDGDVSVATKTKTKTQRPPMYKVMLLNDDYTPMEFVVHVLERFFGI 62 Query: 86 DHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 H A IML VH +G+ GV+++EIAE KV QVM+++R++Q+PLQC ME++ Sbjct: 63 THSQAVEIMLVVHKKGLAVVGVFSHEIAETKVAQVMDFARRNQHPLQCTMEKE 115 >gi|124267648|ref|YP_001021652.1| hypothetical protein Mpe_A2462 [Methylibium petroleiphilum PM1] gi|124260423|gb|ABM95417.1| conserved hypothetical protein [Methylibium petroleiphilum PM1] Length = 118 Score = 109 bits (272), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 47/88 (53%), Positives = 66/88 (75%) Query: 49 RFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVY 108 R S++V P++Y+V+L+ND+YTPMEFV+ VLQ FF +D ETA IMLK+HH+G G CGVY Sbjct: 29 RQSARVEPPRMYQVVLLNDDYTPMEFVVMVLQEFFQRDIETATQIMLKIHHEGRGVCGVY 88 Query: 109 AYEIAEMKVNQVMNYSRQHQYPLQCIME 136 ++A KV V+ +++ +PLQC ME Sbjct: 89 TKDVASTKVESVLAAAKRSGHPLQCTME 116 >gi|312795291|ref|YP_004028213.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia rhizoxinica HKI 454] gi|312167066|emb|CBW74069.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia rhizoxinica HKI 454] Length = 104 Score = 108 bits (271), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 48/89 (53%), Positives = 67/89 (75%) Query: 49 RFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVY 108 R K + P +YRV+L+ND++TPMEFV+ V+Q +F KD +TA IMLKVH++G G CGVY Sbjct: 15 RQEHKAKPPSMYRVVLLNDDFTPMEFVVMVIQQYFNKDRDTATQIMLKVHYEGRGICGVY 74 Query: 109 AYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +IA KV QV+ ++RQ +PLQC+ME+ Sbjct: 75 TRDIASTKVEQVVTHARQAGHPLQCVMEE 103 >gi|82703365|ref|YP_412931.1| ATP-dependent Clp protease adaptor protein ClpS [Nitrosospira multiformis ATCC 25196] gi|123544045|sp|Q2Y6T2|CLPS_NITMU RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|82411430|gb|ABB75539.1| ATP-dependent Clp protease adaptor protein ClpS [Nitrosospira multiformis ATCC 25196] Length = 102 Score = 108 bits (271), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 46/86 (53%), Positives = 66/86 (76%) Query: 52 SKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYE 111 SK++ P +++V+L+ND++TPM+FV+ VLQ FF + E A IMLKVH G G CGVY + Sbjct: 16 SKLKPPPMFKVILLNDDFTPMDFVVTVLQTFFSMNREQATQIMLKVHMDGAGVCGVYPND 75 Query: 112 IAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +A KV QV+ ++RQHQ+PLQC+ME+ Sbjct: 76 VASTKVEQVVAFARQHQHPLQCVMEE 101 >gi|91784980|ref|YP_560186.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia xenovorans LB400] gi|170693565|ref|ZP_02884723.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia graminis C4D1M] gi|296157172|ref|ZP_06840008.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia sp. Ch1-1] gi|307730769|ref|YP_003907993.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia sp. CCGE1003] gi|323527132|ref|YP_004229285.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia sp. CCGE1001] gi|122970195|sp|Q13UV5|CLPS_BURXL RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|91688934|gb|ABE32134.1| Putative ATP-dependent Clp protease adaptor protein ClpS [Burkholderia xenovorans LB400] gi|170141347|gb|EDT09517.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia graminis C4D1M] gi|295892508|gb|EFG72290.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia sp. Ch1-1] gi|307585304|gb|ADN58702.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia sp. CCGE1003] gi|323384134|gb|ADX56225.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia sp. CCGE1001] Length = 104 Score = 108 bits (271), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 46/89 (51%), Positives = 67/89 (75%) Query: 49 RFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVY 108 R K++ P +Y+V+L+ND++TPMEFV+ ++Q +F KD ETA +MLKVH +G G CGVY Sbjct: 15 RQEKKLKPPSMYKVVLLNDDFTPMEFVVMIVQEYFNKDRETATQVMLKVHREGRGVCGVY 74 Query: 109 AYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +IA KV QV+ ++RQ +PLQC+ME+ Sbjct: 75 TRDIASTKVEQVVTHARQAGHPLQCVMEE 103 >gi|262274511|ref|ZP_06052322.1| ATP-dependent Clp protease adaptor protein ClpS [Grimontia hollisae CIP 101886] gi|262221074|gb|EEY72388.1| ATP-dependent Clp protease adaptor protein ClpS [Grimontia hollisae CIP 101886] Length = 106 Score = 108 bits (271), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 50/95 (52%), Positives = 71/95 (74%), Gaps = 2/95 (2%) Query: 45 DSEVRFS--SKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGI 102 DS+V+ + +K++ P LY+V+L ND+YTPMEFV+ VLQ FF D + A +ML VH++G Sbjct: 11 DSDVKEAEETKLKPPSLYKVVLNNDDYTPMEFVVEVLQRFFSMDIDKATQLMLTVHYEGR 70 Query: 103 GECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 CG+Y E+AEMKV QVM Y+++HQ+PL C ME+ Sbjct: 71 AVCGIYTAEVAEMKVAQVMMYAKEHQHPLLCTMEK 105 >gi|325981356|ref|YP_004293758.1| ATP-dependent Clp protease adaptor protein ClpS [Nitrosomonas sp. AL212] gi|325530875|gb|ADZ25596.1| ATP-dependent Clp protease adaptor protein ClpS [Nitrosomonas sp. AL212] Length = 102 Score = 108 bits (271), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 45/85 (52%), Positives = 67/85 (78%) Query: 53 KVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEI 112 K + P LY++LL+ND++TPMEFV+ VL++FF + E A IMLKVH +G+G CG+Y +I Sbjct: 17 KYKPPPLYKILLLNDDFTPMEFVVEVLKSFFSMNQEQATLIMLKVHTEGVGVCGIYPGDI 76 Query: 113 AEMKVNQVMNYSRQHQYPLQCIMEQ 137 A KV QV+ +SR++Q+PL+C+ME+ Sbjct: 77 ASTKVKQVIEFSRRNQHPLRCVMEE 101 >gi|209517459|ref|ZP_03266300.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia sp. H160] gi|295677449|ref|YP_003605973.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia sp. CCGE1002] gi|209502113|gb|EEA02128.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia sp. H160] gi|295437292|gb|ADG16462.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia sp. CCGE1002] Length = 104 Score = 108 bits (271), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 46/89 (51%), Positives = 67/89 (75%) Query: 49 RFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVY 108 R K++ P +Y+V+L+ND++TPMEFV+ ++Q +F KD ETA +MLKVH +G G CGVY Sbjct: 15 RQEQKLKPPSMYKVVLLNDDFTPMEFVVMIVQEYFNKDRETATQVMLKVHREGRGVCGVY 74 Query: 109 AYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +IA KV QV+ ++RQ +PLQC+ME+ Sbjct: 75 TRDIASTKVEQVVTHARQAGHPLQCVMEE 103 >gi|187478584|ref|YP_786608.1| ATP-dependent Clp protease adaptor protein ClpS [Bordetella avium 197N] gi|123514730|sp|Q2KZI1|CLPS_BORA1 RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|115423170|emb|CAJ49701.1| ATP-dependent clp protease adaptor protein [Bordetella avium 197N] Length = 104 Score = 108 bits (270), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 47/86 (54%), Positives = 64/86 (74%) Query: 51 SSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAY 110 S++ P +Y+V+L+ND+YTPMEFV+ VLQ FF K+ E A IML+VHH+G G CGVY Sbjct: 17 SARTAPPPMYQVVLLNDDYTPMEFVVKVLQKFFGKNQEEATRIMLQVHHEGRGICGVYVR 76 Query: 111 EIAEMKVNQVMNYSRQHQYPLQCIME 136 ++A ++ QV Y+R Q+PLQCIME Sbjct: 77 DVAATRIAQVAQYARARQHPLQCIME 102 >gi|85704460|ref|ZP_01035562.1| ATP-dependent Clp protease, adaptor protein ClpS [Roseovarius sp. 217] gi|85670868|gb|EAQ25727.1| ATP-dependent Clp protease, adaptor protein ClpS [Roseovarius sp. 217] Length = 112 Score = 108 bits (270), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 49/91 (53%), Positives = 67/91 (73%) Query: 48 VRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGV 107 V K + P LY+VLL+ND+YTPMEFV+ VL+ FF H A IML VH +G+ GV Sbjct: 22 VATRPKTKRPPLYKVLLLNDDYTPMEFVVAVLERFFGMSHAQAFEIMLTVHKKGLAVVGV 81 Query: 108 YAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 +++EIAE KV QVM+++R+HQ+PLQC ME++ Sbjct: 82 FSHEIAETKVAQVMDFARRHQHPLQCTMEKE 112 >gi|149201108|ref|ZP_01878083.1| ATP-dependent Clp protease adaptor protein ClpS [Roseovarius sp. TM1035] gi|149145441|gb|EDM33467.1| ATP-dependent Clp protease adaptor protein ClpS [Roseovarius sp. TM1035] Length = 112 Score = 108 bits (270), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 49/91 (53%), Positives = 67/91 (73%) Query: 48 VRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGV 107 V K + P LY+VLL+ND+YTPMEFV+ VL+ FF H A IML VH +G+ GV Sbjct: 22 VATRPKTKRPPLYKVLLLNDDYTPMEFVVAVLERFFGMSHAQAFEIMLTVHKKGLAVVGV 81 Query: 108 YAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 +++EIAE KV QVM+++R+HQ+PLQC ME++ Sbjct: 82 FSHEIAETKVAQVMDFARRHQHPLQCTMEKE 112 >gi|217969671|ref|YP_002354905.1| ATP-dependent Clp protease adaptor protein ClpS [Thauera sp. MZ1T] gi|217506998|gb|ACK54009.1| ATP-dependent Clp protease adaptor protein ClpS [Thauera sp. MZ1T] Length = 102 Score = 108 bits (269), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 45/86 (52%), Positives = 66/86 (76%) Query: 52 SKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYE 111 ++ R P L++V+L+ND+YTPM+FVI VLQ +F D E A +ML+VH +G+G CGV+ + Sbjct: 16 TRTRPPPLFKVMLLNDDYTPMDFVIVVLQKYFGMDRERATRVMLQVHREGMGVCGVFPRD 75 Query: 112 IAEMKVNQVMNYSRQHQYPLQCIMEQ 137 IA KV QV +++RQHQ+PL C+ME+ Sbjct: 76 IATTKVEQVTSFARQHQHPLACVMEE 101 >gi|149928085|ref|ZP_01916332.1| ATP-dependent Clp protease adaptor protein ClpS [Limnobacter sp. MED105] gi|149823171|gb|EDM82408.1| ATP-dependent Clp protease adaptor protein ClpS [Limnobacter sp. MED105] Length = 134 Score = 108 bits (269), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 48/87 (55%), Positives = 65/87 (74%) Query: 51 SSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAY 110 + K ++P +Y+V+L+ND+YTPMEFV+ VLQ FF K E A IMLKVH +G G CGVY Sbjct: 47 TQKAKLPPMYQVVLLNDDYTPMEFVVIVLQKFFGKGREQATQIMLKVHREGKGVCGVYPK 106 Query: 111 EIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +IA KV V +++QHQ+PLQC+ME+ Sbjct: 107 DIASTKVEMVCGFAKQHQHPLQCVMEE 133 >gi|153835790|ref|ZP_01988457.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio harveyi HY01] gi|156973856|ref|YP_001444763.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio harveyi ATCC BAA-1116] gi|269960956|ref|ZP_06175325.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio harveyi 1DA3] gi|166214749|sp|A7N1L5|CLPS_VIBHB RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|148867478|gb|EDL66853.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio harveyi HY01] gi|156525450|gb|ABU70536.1| hypothetical protein VIBHAR_01566 [Vibrio harveyi ATCC BAA-1116] gi|269834175|gb|EEZ88265.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio harveyi 1DA3] Length = 106 Score = 108 bits (269), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 51/89 (57%), Positives = 66/89 (74%) Query: 49 RFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVY 108 R S+KV+ PKLY V+L ND+YTPM+FVI VL+ FF D + A IMLK+H++G CG Y Sbjct: 17 RESTKVQPPKLYNVVLNNDDYTPMDFVIEVLERFFSHDIDKATQIMLKIHYEGKAICGTY 76 Query: 109 AYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 + EIAE KV QV YSR++++PL C MEQ Sbjct: 77 SAEIAETKVAQVTMYSRENEHPLLCTMEQ 105 >gi|163856974|ref|YP_001631272.1| ATP-dependent Clp protease adaptor protein ClpS [Bordetella petrii DSM 12804] gi|229889825|sp|A9IQ03|CLPS_BORPD RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|163260702|emb|CAP43004.1| hypothetical protein Bpet2662 [Bordetella petrii] Length = 104 Score = 108 bits (269), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 45/88 (51%), Positives = 64/88 (72%) Query: 49 RFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVY 108 + ++ P +Y+V+L+ND+YTPMEFV+ VLQ FF K+ E A IML+VHH+G G CGVY Sbjct: 15 KAPARTAPPPMYQVVLLNDDYTPMEFVVKVLQKFFGKNQEDATRIMLQVHHEGRGTCGVY 74 Query: 109 AYEIAEMKVNQVMNYSRQHQYPLQCIME 136 ++A ++ QV Y+R Q+PLQC+ME Sbjct: 75 PRDVAATRIAQVAQYARARQHPLQCVME 102 >gi|297539530|ref|YP_003675299.1| ATP-dependent Clp protease adaptor protein ClpS [Methylotenera sp. 301] gi|297258877|gb|ADI30722.1| ATP-dependent Clp protease adaptor protein ClpS [Methylotenera sp. 301] Length = 108 Score = 108 bits (269), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 50/98 (51%), Positives = 69/98 (70%), Gaps = 3/98 (3%) Query: 39 EFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVH 98 E D L EV +K ++P ++ VLL+ND+YTPMEFV+ ++ FF K E A IMLKVH Sbjct: 12 ENDVALKPEV---AKPKLPPMFNVLLLNDDYTPMEFVVECIERFFNKSREQATQIMLKVH 68 Query: 99 HQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIME 136 +G+ CGVY +IAE K+NQV++Y+R Q+PLQC+ E Sbjct: 69 TEGLAVCGVYPQDIAETKMNQVLSYARDQQHPLQCVTE 106 >gi|304321615|ref|YP_003855258.1| ATP-dependent Clp protease adaptor protein ClpS [Parvularcula bermudensis HTCC2503] gi|303300517|gb|ADM10116.1| ATP-dependent Clp protease adaptor protein ClpS [Parvularcula bermudensis HTCC2503] Length = 146 Score = 108 bits (269), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 49/107 (45%), Positives = 75/107 (70%) Query: 32 MNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAK 91 M++ G + + + V+ K + P LY+VLL+ND+YTP EFV+ +L+ F+K H+ A Sbjct: 40 MSEDGDEKPGGNVATIVKEKPKAKRPSLYKVLLLNDDYTPQEFVVWLLEAVFHKGHDEAL 99 Query: 92 CIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 IML VH+ G+G CGVY YE+AE KV QV+ +R++++PLQC ME++ Sbjct: 100 RIMLHVHNHGVGICGVYTYEVAETKVAQVLELARRNEHPLQCTMERE 146 >gi|255264828|ref|ZP_05344170.1| ATP-dependent Clp protease adaptor protein ClpS [Thalassiobium sp. R2A62] gi|255107163|gb|EET49837.1| ATP-dependent Clp protease adaptor protein ClpS [Thalassiobium sp. R2A62] Length = 113 Score = 108 bits (269), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 54/114 (47%), Positives = 77/114 (67%), Gaps = 6/114 (5%) Query: 25 IFMADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFY 84 I MAD G + D L E R K + P LY+V+++ND+YTPMEFV+ VL+ FF Sbjct: 6 IMMADD----PGGDDSDVGLAVETR--PKTKRPPLYKVMILNDDYTPMEFVVMVLERFFG 59 Query: 85 KDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 +H + +ML VH +G+ GV++YEIAE KV QVM++++QHQ+PLQC ME++ Sbjct: 60 MNHAQSFELMLTVHKKGLAVVGVFSYEIAETKVAQVMDFAQQHQHPLQCTMEKE 113 >gi|91788801|ref|YP_549753.1| ATP-dependent Clp protease adaptor protein ClpS [Polaromonas sp. JS666] gi|91698026|gb|ABE44855.1| ATP-dependent Clp protease adaptor protein ClpS [Polaromonas sp. JS666] Length = 125 Score = 108 bits (269), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 46/88 (52%), Positives = 66/88 (75%) Query: 49 RFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVY 108 R K + P++Y+V+L+ND+YTPMEFV+ +LQ FF KDHETA IMLK+H G G CGV+ Sbjct: 35 RRPQKTKPPQMYQVVLLNDDYTPMEFVVVILQEFFNKDHETATQIMLKIHLDGKGVCGVF 94 Query: 109 AYEIAEMKVNQVMNYSRQHQYPLQCIME 136 + ++A KV+QV +R++ +PLQC+ E Sbjct: 95 SKDVAATKVDQVTEAARKNGHPLQCVSE 122 >gi|83855083|ref|ZP_00948613.1| ATP-dependent Clp protease, adaptor protein ClpS [Sulfitobacter sp. NAS-14.1] gi|83941607|ref|ZP_00954069.1| ATP-dependent Clp protease, adaptor protein ClpS [Sulfitobacter sp. EE-36] gi|83842926|gb|EAP82093.1| ATP-dependent Clp protease, adaptor protein ClpS [Sulfitobacter sp. NAS-14.1] gi|83847427|gb|EAP85302.1| ATP-dependent Clp protease, adaptor protein ClpS [Sulfitobacter sp. EE-36] Length = 113 Score = 108 bits (269), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 48/98 (48%), Positives = 71/98 (72%) Query: 41 DNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQ 100 D+ D + K + P LY+V+L+ND++TPMEFV+ VL+ FF +H A IML VH + Sbjct: 15 DDETDLLTKTKPKTKRPPLYKVMLLNDDFTPMEFVVIVLERFFGLNHAQAFEIMLTVHKK 74 Query: 101 GIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 G+ GV+++EIAE KV QVM+++R+HQ+PLQC ME++ Sbjct: 75 GLAVVGVFSHEIAETKVAQVMDFARRHQHPLQCTMEKE 112 >gi|186475335|ref|YP_001856805.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia phymatum STM815] gi|238691266|sp|B2JDY3|CLPS_BURP8 RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|184191794|gb|ACC69759.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia phymatum STM815] Length = 104 Score = 108 bits (269), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 46/89 (51%), Positives = 67/89 (75%) Query: 49 RFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVY 108 R K++ P +++V+L+ND++TPMEFV+ ++Q +F KD ETA IMLKVH +G G CGVY Sbjct: 15 RQEQKLKPPAMFKVVLLNDDFTPMEFVVMIVQEYFNKDRETATQIMLKVHREGRGVCGVY 74 Query: 109 AYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +IA KV QV+ ++RQ +PLQC+ME+ Sbjct: 75 TRDIASTKVEQVVTHARQAGHPLQCVMEE 103 >gi|56477975|ref|YP_159564.1| ATP-dependent Clp protease adaptor protein ClpS [Aromatoleum aromaticum EbN1] gi|67460190|sp|Q5P201|CLPS_AZOSE RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|56314018|emb|CAI08663.1| ATP-dependent Clp protease adaptor protein ClpS [Aromatoleum aromaticum EbN1] Length = 102 Score = 107 bits (268), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 45/87 (51%), Positives = 66/87 (75%) Query: 51 SSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAY 110 ++ + P LY+VLL+ND++TPM+FVI VLQ FF D E A +ML+VH +G+G CGV+ Sbjct: 15 QTRTKPPPLYKVLLLNDDFTPMDFVIVVLQKFFGMDRERATRVMLQVHREGMGVCGVFPK 74 Query: 111 EIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 ++A KV QV+ ++RQHQ+PL C+ME+ Sbjct: 75 DVAATKVEQVVAFARQHQHPLACVMEE 101 >gi|28897787|ref|NP_797392.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio parahaemolyticus RIMD 2210633] gi|153837344|ref|ZP_01990011.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio parahaemolyticus AQ3810] gi|260365333|ref|ZP_05777884.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio parahaemolyticus K5030] gi|260876951|ref|ZP_05889306.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio parahaemolyticus AN-5034] gi|260897908|ref|ZP_05906404.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio parahaemolyticus Peru-466] gi|260901417|ref|ZP_05909812.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio parahaemolyticus AQ4037] gi|33301900|sp|Q87QY5|CLPS_VIBPA RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|28806000|dbj|BAC59276.1| conserved hypothetical protein [Vibrio parahaemolyticus RIMD 2210633] gi|149749375|gb|EDM60148.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio parahaemolyticus AQ3810] gi|308085449|gb|EFO35144.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio parahaemolyticus Peru-466] gi|308093908|gb|EFO43603.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio parahaemolyticus AN-5034] gi|308107509|gb|EFO45049.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio parahaemolyticus AQ4037] gi|308112689|gb|EFO50229.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio parahaemolyticus K5030] gi|328473237|gb|EGF44085.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio parahaemolyticus 10329] Length = 106 Score = 107 bits (268), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 51/89 (57%), Positives = 66/89 (74%) Query: 49 RFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVY 108 R S+KV+ PKLY V+L ND+YTPM+FVI VL+ FF D + A IMLKVH++G CG Y Sbjct: 17 RESTKVQPPKLYNVVLNNDDYTPMDFVIEVLERFFSHDIDKATQIMLKVHYEGKAVCGTY 76 Query: 109 AYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 + EIAE KV QV Y+R++++PL C MEQ Sbjct: 77 SAEIAETKVAQVTMYARENEHPLLCTMEQ 105 >gi|296135869|ref|YP_003643111.1| ATP-dependent Clp protease adaptor protein ClpS [Thiomonas intermedia K12] gi|294340063|emb|CAZ88431.1| ATP-dependent Clp protease adaptor protein clpS [Thiomonas sp. 3As] gi|295795991|gb|ADG30781.1| ATP-dependent Clp protease adaptor protein ClpS [Thiomonas intermedia K12] Length = 108 Score = 107 bits (268), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 48/88 (54%), Positives = 66/88 (75%) Query: 49 RFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVY 108 R + +++ P +Y+V+L+NDN+TPMEFV+ V+Q++F KD ETA IMLKVH G G CGVY Sbjct: 19 RQTLRLKPPAMYQVILLNDNFTPMEFVVVVIQHYFNKDRETATQIMLKVHRDGRGVCGVY 78 Query: 109 AYEIAEMKVNQVMNYSRQHQYPLQCIME 136 +IA KV QV+ +RQ +PLQC+ME Sbjct: 79 TRDIAATKVEQVIGAARQAGHPLQCVME 106 >gi|163802085|ref|ZP_02195981.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio sp. AND4] gi|159174226|gb|EDP59034.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio sp. AND4] Length = 106 Score = 107 bits (268), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 51/89 (57%), Positives = 65/89 (73%) Query: 49 RFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVY 108 R S+KV+ PKLY V+L ND+YTPM+FVI VL+ FF D + A IMLK+H+ G CG Y Sbjct: 17 RESTKVQPPKLYNVVLNNDDYTPMDFVIEVLERFFSHDIDKATQIMLKIHYDGKAICGTY 76 Query: 109 AYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 + EIAE KV QV YSR++++PL C MEQ Sbjct: 77 SAEIAETKVAQVTMYSRENEHPLLCTMEQ 105 >gi|34499123|ref|NP_903338.1| hypothetical protein CV_3668 [Chromobacterium violaceum ATCC 12472] gi|39930967|sp|Q7NRW1|CLPS_CHRVO RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|34104974|gb|AAQ61330.1| conserved hypothetical protein [Chromobacterium violaceum ATCC 12472] Length = 106 Score = 107 bits (268), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 48/89 (53%), Positives = 68/89 (76%), Gaps = 2/89 (2%) Query: 51 SSKVR--VPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVY 108 +S+VR P +Y+VLL+ND++TPM+FV+ VLQ FF+ + E A IML+VH QG G CGVY Sbjct: 17 ASRVRENPPPMYKVLLLNDDFTPMDFVVQVLQQFFHMNREKATHIMLQVHTQGHGVCGVY 76 Query: 109 AYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 ++A KV QV+ Y++ HQ+PLQC+ME+ Sbjct: 77 TKDVAATKVEQVLQYAKAHQHPLQCVMEE 105 >gi|292492310|ref|YP_003527749.1| ATP-dependent Clp protease adaptor protein ClpS [Nitrosococcus halophilus Nc4] gi|291580905|gb|ADE15362.1| ATP-dependent Clp protease adaptor protein ClpS [Nitrosococcus halophilus Nc4] Length = 107 Score = 107 bits (267), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 47/86 (54%), Positives = 64/86 (74%) Query: 52 SKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYE 111 K++ P +Y+V+++ND+YTPMEFV+ VLQ FF D E A IM +VH +G G CGV+ YE Sbjct: 21 PKLKRPPMYKVVMLNDDYTPMEFVVEVLQTFFAMDREKATRIMWQVHTEGKGICGVFTYE 80 Query: 112 IAEMKVNQVMNYSRQHQYPLQCIMEQ 137 IAE KV QV YS HQ+PL+C++E+ Sbjct: 81 IAETKVAQVNEYSLNHQHPLKCVLEK 106 >gi|152969471|ref|YP_001334580.1| ATP-dependent Clp protease adaptor protein ClpS [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|206576057|ref|YP_002239467.1| ATP-dependent Clp protease adaptor protein ClpS [Klebsiella pneumoniae 342] gi|238893943|ref|YP_002918677.1| ATP-dependent Clp protease adaptor protein ClpS [Klebsiella pneumoniae NTUH-K2044] gi|288936315|ref|YP_003440374.1| ATP-dependent Clp protease adaptor protein ClpS [Klebsiella variicola At-22] gi|290510629|ref|ZP_06549999.1| ATP-dependent Clp protease adaptor protein ClpS [Klebsiella sp. 1_1_55] gi|329998510|ref|ZP_08303132.1| ATP-dependent Clp protease adaptor protein ClpS [Klebsiella sp. MS 92-3] gi|166214736|sp|A6T6X9|CLPS_KLEP7 RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|238066652|sp|B5XYB2|CLPS_KLEP3 RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|150954320|gb|ABR76350.1| ATP-dependent Clp protease adaptor protein ClpS [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|206565115|gb|ACI06891.1| ATP-dependent Clp protease adaptor protein ClpS [Klebsiella pneumoniae 342] gi|238546259|dbj|BAH62610.1| ATP-dependent Clp protease adaptor protein [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] gi|288891024|gb|ADC59342.1| ATP-dependent Clp protease adaptor protein ClpS [Klebsiella variicola At-22] gi|289777345|gb|EFD85343.1| ATP-dependent Clp protease adaptor protein ClpS [Klebsiella sp. 1_1_55] gi|328538655|gb|EGF64752.1| ATP-dependent Clp protease adaptor protein ClpS [Klebsiella sp. MS 92-3] Length = 105 Score = 107 bits (267), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 50/106 (47%), Positives = 74/106 (69%), Gaps = 2/106 (1%) Query: 32 MNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAK 91 M+K+ +F++ +D EVR ++ P +Y+V+LVND+YTPMEFVI VLQ FF D E A Sbjct: 1 MSKRDWLDFEHLVDDEVR--DAIKPPSMYKVILVNDDYTPMEFVIDVLQKFFSYDVERAT 58 Query: 92 CIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +ML VH++G CGV+ E+AE KV V Y+R++++PL C +E+ Sbjct: 59 QLMLTVHYEGKAICGVFTAEVAETKVAMVNQYARENEHPLLCTLEK 104 >gi|198282816|ref|YP_002219137.1| ATP-dependent Clp protease adaptor protein ClpS [Acidithiobacillus ferrooxidans ATCC 53993] gi|198247337|gb|ACH82930.1| ATP-dependent Clp protease adaptor protein ClpS [Acidithiobacillus ferrooxidans ATCC 53993] Length = 102 Score = 107 bits (267), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 43/82 (52%), Positives = 66/82 (80%) Query: 57 PKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMK 116 P++YRVLLVND++TPM++V+H+L+ +F+K H+ A +M+ VH QG G CG++ Y++AE K Sbjct: 21 PRMYRVLLVNDDFTPMDYVVHILEAYFHKPHDEAVAVMMAVHQQGRGLCGIFPYDLAETK 80 Query: 117 VNQVMNYSRQHQYPLQCIMEQK 138 V V +RQHQ+PL+CIME++ Sbjct: 81 VALVTADARQHQHPLRCIMEKE 102 >gi|220935008|ref|YP_002513907.1| ATP-dependent Clp protease adaptor protein ClpS [Thioalkalivibrio sp. HL-EbGR7] gi|219996318|gb|ACL72920.1| ATP-dependent Clp protease adaptor protein ClpS [Thioalkalivibrio sp. HL-EbGR7] Length = 106 Score = 107 bits (267), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 49/86 (56%), Positives = 64/86 (74%) Query: 52 SKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYE 111 K++ P Y+V+L+ND+YTPMEFV+ VL++FF D E A IML VH +G G CG+Y + Sbjct: 20 PKLKPPPQYQVVLLNDDYTPMEFVVEVLESFFGMDREKATRIMLHVHTRGKGVCGIYPRD 79 Query: 112 IAEMKVNQVMNYSRQHQYPLQCIMEQ 137 IAE KV QV +Y+RQHQ+PL C MEQ Sbjct: 80 IAETKVAQVNDYARQHQHPLLCAMEQ 105 >gi|332187681|ref|ZP_08389416.1| ATP-dependent Clp protease adaptor ClpS family protein [Sphingomonas sp. S17] gi|332012247|gb|EGI54317.1| ATP-dependent Clp protease adaptor ClpS family protein [Sphingomonas sp. S17] Length = 118 Score = 107 bits (266), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 46/96 (47%), Positives = 68/96 (70%) Query: 42 NCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQG 101 N L R ++ + P YRVL++ND+YTPMEFV+ LQ FF + A +ML VH +G Sbjct: 22 NGLGVATRTRARTKQPTPYRVLMLNDDYTPMEFVVLCLQRFFRMSMDDATRVMLHVHQRG 81 Query: 102 IGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +G CGV++YE+AE KV QV++++R +Q+PLQC +E+ Sbjct: 82 VGVCGVFSYEVAETKVAQVIDFARANQHPLQCTLEK 117 >gi|78485455|ref|YP_391380.1| ATP-dependent Clp protease adaptor protein ClpS [Thiomicrospira crunogena XCL-2] gi|123555526|sp|Q31GL7|CLPS_THICR RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|78363741|gb|ABB41706.1| ATP-dependent Clp protease adaptor protein ClpS [Thiomicrospira crunogena XCL-2] Length = 104 Score = 107 bits (266), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 48/85 (56%), Positives = 63/85 (74%) Query: 52 SKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYE 111 KV+ PK Y+V+L+ND++TPM+FV+ VL FF D A +ML VH +G G CGVY+ E Sbjct: 18 PKVKPPKRYQVVLLNDDFTPMDFVVDVLTRFFGMDEAKANAVMLAVHTKGKGTCGVYSRE 77 Query: 112 IAEMKVNQVMNYSRQHQYPLQCIME 136 +AEMKV QV Y+R+HQ+PLQC ME Sbjct: 78 VAEMKVMQVNQYAREHQHPLQCEME 102 >gi|218668114|ref|YP_002425013.1| ATP-dependent Clp protease adaptor protein ClpS [Acidithiobacillus ferrooxidans ATCC 23270] gi|218520327|gb|ACK80913.1| ATP-dependent Clp protease adaptor protein ClpS [Acidithiobacillus ferrooxidans ATCC 23270] Length = 114 Score = 107 bits (266), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 43/82 (52%), Positives = 66/82 (80%) Query: 57 PKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMK 116 P++YRVLLVND++TPM++V+H+L+ +F+K H+ A +M+ VH QG G CG++ Y++AE K Sbjct: 33 PRMYRVLLVNDDFTPMDYVVHILEAYFHKPHDEAVAVMMAVHQQGRGLCGIFPYDLAETK 92 Query: 117 VNQVMNYSRQHQYPLQCIMEQK 138 V V +RQHQ+PL+CIME++ Sbjct: 93 VALVTADARQHQHPLRCIMEKE 114 >gi|134095622|ref|YP_001100697.1| ATP-dependent Clp protease adaptor protein ClpS [Herminiimonas arsenicoxydans] gi|254763818|sp|A4G7T9|CLPS_HERAR RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|133739525|emb|CAL62576.1| ATP-dependent Clp protease adaptor protein ClpS [Herminiimonas arsenicoxydans] Length = 102 Score = 107 bits (266), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 48/90 (53%), Positives = 66/90 (73%) Query: 48 VRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGV 107 +R K++ P +Y+VLL+ND+YTPMEFV+ +LQ +F KD ETA IML VH G G CGV Sbjct: 12 MRQEQKLKPPSMYQVLLLNDDYTPMEFVVMILQEYFSKDRETATQIMLMVHRDGKGICGV 71 Query: 108 YAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 Y +IA KV V+N++R+ +PLQC+ME+ Sbjct: 72 YPKDIASTKVELVLNHARKAGHPLQCVMEE 101 >gi|319793921|ref|YP_004155561.1| ATP-dependent clp protease adaptor protein clps [Variovorax paradoxus EPS] gi|315596384|gb|ADU37450.1| ATP-dependent Clp protease adaptor protein ClpS [Variovorax paradoxus EPS] Length = 119 Score = 106 bits (265), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 48/88 (54%), Positives = 64/88 (72%) Query: 49 RFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVY 108 R K P++Y+V+++ND+YTPMEFVI VLQ +F KD ETA IMLK+H G G CGVY Sbjct: 29 RRPQKTAPPQMYQVVMLNDDYTPMEFVIVVLQEYFSKDRETATQIMLKIHLDGRGVCGVY 88 Query: 109 AYEIAEMKVNQVMNYSRQHQYPLQCIME 136 + ++A KVNQVM ++Q +PLQC+ E Sbjct: 89 SRDMAATKVNQVMEAAQQAGHPLQCVSE 116 >gi|152983115|ref|YP_001354205.1| ATP-dependent Clp protease adaptor protein ClpS [Janthinobacterium sp. Marseille] gi|254763819|sp|A6T108|CLPS_JANMA RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|151283192|gb|ABR91602.1| ATP-dependent Clp protease adaptor protein ClpS [Janthinobacterium sp. Marseille] Length = 102 Score = 106 bits (265), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 48/90 (53%), Positives = 66/90 (73%) Query: 48 VRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGV 107 +R K++ P +Y+VLL+ND+YTPMEFV+ +LQ +F KD ETA IML VH G G CGV Sbjct: 12 MRQEQKLKPPSMYQVLLLNDDYTPMEFVVLILQEYFSKDRETATQIMLMVHRDGKGICGV 71 Query: 108 YAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 Y +IA KV V+N++R+ +PLQC+ME+ Sbjct: 72 YPKDIASTKVELVLNHARKAGHPLQCVMEE 101 >gi|77165887|ref|YP_344412.1| ATP-dependent Clp protease adaptor protein ClpS [Nitrosococcus oceani ATCC 19707] gi|254433959|ref|ZP_05047467.1| ATP-dependent Clp protease adaptor protein ClpS [Nitrosococcus oceani AFC27] gi|76884201|gb|ABA58882.1| ATP-dependent Clp protease adaptor protein ClpS [Nitrosococcus oceani ATCC 19707] gi|207090292|gb|EDZ67563.1| ATP-dependent Clp protease adaptor protein ClpS [Nitrosococcus oceani AFC27] Length = 107 Score = 106 bits (265), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 46/86 (53%), Positives = 64/86 (74%) Query: 52 SKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYE 111 K++ P LY+V+++ND+YTPMEFV+ VLQ FF D E A +M +VH +G G CGV+ YE Sbjct: 21 PKLKRPPLYKVVMLNDDYTPMEFVVKVLQAFFAMDREKATRVMWQVHTEGKGICGVFTYE 80 Query: 112 IAEMKVNQVMNYSRQHQYPLQCIMEQ 137 IAE K +QV YS HQ+PL+C++E+ Sbjct: 81 IAETKASQVNEYSMNHQHPLKCVLER 106 >gi|255020026|ref|ZP_05292099.1| ATP-dependent Clp protease adaptor protein ClpS [Acidithiobacillus caldus ATCC 51756] gi|254970555|gb|EET28044.1| ATP-dependent Clp protease adaptor protein ClpS [Acidithiobacillus caldus ATCC 51756] Length = 102 Score = 106 bits (265), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 47/88 (53%), Positives = 66/88 (75%) Query: 51 SSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAY 110 +++ P YRVLL+ND++TPM++V+ VLQ +F+K HE A IML+VHH G G CGVY Y Sbjct: 15 EPRLKEPSRYRVLLLNDDFTPMDYVVQVLQQYFHKTHEEAVQIMLEVHHSGRGICGVYPY 74 Query: 111 EIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 ++AE KV V +RQHQ+PL+C ME++ Sbjct: 75 DMAETKVALVTADARQHQHPLRCTMEKE 102 >gi|332110106|gb|EGJ10734.1| hypothetical protein RBXJA2T_10429 [Rubrivivax benzoatilyticus JA2] Length = 110 Score = 106 bits (265), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 47/88 (53%), Positives = 67/88 (76%) Query: 49 RFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVY 108 R + +V+ P LY+V+L+ND+YTPMEFV+ VLQ++F +D +TA IMLK+HH+G G CGVY Sbjct: 21 RKAQRVKPPSLYQVVLLNDDYTPMEFVVMVLQHYFQRDLDTATHIMLKIHHEGRGVCGVY 80 Query: 109 AYEIAEMKVNQVMNYSRQHQYPLQCIME 136 ++A KV V+ +R+ +PLQCIME Sbjct: 81 PKDVAATKVELVLAAARRDGHPLQCIME 108 >gi|163744786|ref|ZP_02152146.1| ATP-dependent Clp protease, putative [Oceanibulbus indolifex HEL-45] gi|161381604|gb|EDQ06013.1| ATP-dependent Clp protease, putative [Oceanibulbus indolifex HEL-45] Length = 130 Score = 106 bits (265), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 48/96 (50%), Positives = 72/96 (75%), Gaps = 2/96 (2%) Query: 45 DSEV--RFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGI 102 D+E+ + K + P LY+V+L+ND++TPMEFV+ VL+ FF +H A IML VH +G+ Sbjct: 34 DTELLTKTRPKTKRPPLYKVMLLNDDFTPMEFVVLVLERFFGLNHAQAFEIMLTVHKKGL 93 Query: 103 GECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 GV+++EIAE KV QVM+++R+HQ+PLQC ME++ Sbjct: 94 AVVGVFSHEIAETKVAQVMDFARRHQHPLQCTMEKE 129 >gi|310815392|ref|YP_003963356.1| ATP-dependent Clp protease adaptor protein clpS [Ketogulonicigenium vulgare Y25] gi|308754127|gb|ADO42056.1| ATP-dependent Clp protease adaptor protein clpS [Ketogulonicigenium vulgare Y25] Length = 117 Score = 106 bits (265), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 49/106 (46%), Positives = 71/106 (66%), Gaps = 9/106 (8%) Query: 33 NKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKC 92 N++G+A ++ K + P LY+V+L+ND+YTPMEFV+ VLQ FF D + Sbjct: 21 NERGVA---------LKTRPKTKRPPLYKVMLLNDDYTPMEFVVLVLQRFFSLDESRSVE 71 Query: 93 IMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 IML VH +G+ V+ YE+AE KV QVM ++R++Q+PLQC MEQ+ Sbjct: 72 IMLAVHTKGVAVVAVFPYEVAETKVAQVMEFARRNQHPLQCTMEQE 117 >gi|241763390|ref|ZP_04761445.1| ATP-dependent Clp protease adaptor protein ClpS [Acidovorax delafieldii 2AN] gi|241367432|gb|EER61743.1| ATP-dependent Clp protease adaptor protein ClpS [Acidovorax delafieldii 2AN] Length = 122 Score = 106 bits (264), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 48/88 (54%), Positives = 66/88 (75%) Query: 49 RFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVY 108 R + KVR P++Y+V+++ND+YTPMEFVI VLQ FF KD ETA IMLK+H G G CGVY Sbjct: 32 RRAQKVRPPQMYQVVMLNDDYTPMEFVIVVLQEFFNKDRETATQIMLKIHLDGKGICGVY 91 Query: 109 AYEIAEMKVNQVMNYSRQHQYPLQCIME 136 + ++A KV+QV+ + + +PLQC+ E Sbjct: 92 SRDVAATKVDQVLEAALKAGHPLQCVSE 119 >gi|91229058|ref|ZP_01262884.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio alginolyticus 12G01] gi|269967653|ref|ZP_06181703.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio alginolyticus 40B] gi|91187451|gb|EAS73791.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio alginolyticus 12G01] gi|269827740|gb|EEZ82024.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio alginolyticus 40B] Length = 106 Score = 106 bits (264), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 50/89 (56%), Positives = 66/89 (74%) Query: 49 RFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVY 108 R S+KV+ PKLY V+L ND+YTPM+FVI VL+ FF D + A IML+VH++G CG Y Sbjct: 17 RESTKVQPPKLYNVVLNNDDYTPMDFVIEVLERFFSHDIDKATQIMLQVHYEGKAICGTY 76 Query: 109 AYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 + EIAE KV QV Y+R++++PL C MEQ Sbjct: 77 SAEIAETKVAQVTMYARENEHPLLCTMEQ 105 >gi|319944074|ref|ZP_08018353.1| ATP-dependent Clp protease [Lautropia mirabilis ATCC 51599] gi|319742651|gb|EFV95059.1| ATP-dependent Clp protease [Lautropia mirabilis ATCC 51599] Length = 102 Score = 106 bits (264), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 45/84 (53%), Positives = 64/84 (76%) Query: 54 VRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIA 113 ++ P LY+VLL+ND++TPM+FV+ VLQ FF E A +ML+VHH+G G CG++ +IA Sbjct: 18 LKPPPLYKVLLLNDDFTPMDFVVQVLQKFFSMSLEKATDVMLQVHHEGRGVCGMFPRDIA 77 Query: 114 EMKVNQVMNYSRQHQYPLQCIMEQ 137 KV QV ++RQHQ+PLQC+ME+ Sbjct: 78 LTKVEQVSGFARQHQHPLQCVMEE 101 >gi|237809064|ref|YP_002893504.1| ATP-dependent Clp protease adaptor protein ClpS [Tolumonas auensis DSM 9187] gi|237501325|gb|ACQ93918.1| ATP-dependent Clp protease adaptor protein ClpS [Tolumonas auensis DSM 9187] Length = 104 Score = 105 bits (263), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 46/86 (53%), Positives = 66/86 (76%) Query: 52 SKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYE 111 ++++ P +Y+V+L+ND+YTPM+FV+ VLQ FF D E A +ML VH+ G G CGVY + Sbjct: 18 TEIQPPSMYKVVLLNDDYTPMDFVVEVLQRFFRMDLEKATQVMLAVHYDGKGICGVYTAD 77 Query: 112 IAEMKVNQVMNYSRQHQYPLQCIMEQ 137 IAE KV+QV +Y+R+H++PL C MEQ Sbjct: 78 IAETKVDQVNHYARKHEHPLLCTMEQ 103 >gi|171464059|ref|YP_001798172.1| ATP-dependent Clp protease adaptor protein ClpS [Polynucleobacter necessarius subsp. necessarius STIR1] gi|171193597|gb|ACB44558.1| ATP-dependent Clp protease adaptor protein ClpS [Polynucleobacter necessarius subsp. necessarius STIR1] Length = 118 Score = 105 bits (263), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 47/85 (55%), Positives = 66/85 (77%) Query: 53 KVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEI 112 +V+VP +Y+VLL+ND+YTPMEFV+ V+Q +F KD+ETA IML+VH G G CGV+ ++ Sbjct: 33 QVKVPSMYKVLLLNDDYTPMEFVVMVIQEYFNKDYETATRIMLQVHLVGKGACGVFTRDV 92 Query: 113 AEMKVNQVMNYSRQHQYPLQCIMEQ 137 A KV+QV+ SR+ +PLQC ME+ Sbjct: 93 AATKVHQVIELSREAGHPLQCTMEE 117 >gi|262041017|ref|ZP_06014237.1| ATP-dependent Clp protease adaptor protein ClpS [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259041633|gb|EEW42684.1| ATP-dependent Clp protease adaptor protein ClpS [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 105 Score = 105 bits (263), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 49/106 (46%), Positives = 73/106 (68%), Gaps = 2/106 (1%) Query: 32 MNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAK 91 M+K+ +F++ +D EVR ++ P +Y+V+ VND+YTPMEFVI VLQ FF D E A Sbjct: 1 MSKRDWLDFEHLVDDEVR--DAIKPPSMYKVIFVNDDYTPMEFVIDVLQKFFSYDVERAT 58 Query: 92 CIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +ML VH++G CGV+ E+AE KV V Y+R++++PL C +E+ Sbjct: 59 QLMLTVHYEGKAICGVFTAEVAETKVAMVNQYARENEHPLLCTLEK 104 >gi|83746257|ref|ZP_00943310.1| ATP-dependent Clp protease adaptor protein ClpS [Ralstonia solanacearum UW551] gi|207723598|ref|YP_002253997.1| atp-dependent clp protease adaptor protein clps [Ralstonia solanacearum MolK2] gi|207742558|ref|YP_002258950.1| atp-dependent clp protease adaptor protein clps [Ralstonia solanacearum IPO1609] gi|300690670|ref|YP_003751665.1| ATP-dependent Clp protease adapter protein clpS [Ralstonia solanacearum PSI07] gi|300703254|ref|YP_003744856.1| ATP-dependent clp protease adapter protein clps [Ralstonia solanacearum CFBP2957] gi|83727007|gb|EAP74132.1| ATP-dependent Clp protease adaptor protein ClpS [Ralstonia solanacearum UW551] gi|206588800|emb|CAQ35763.1| atp-dependent clp protease adaptor protein clps [Ralstonia solanacearum MolK2] gi|206593951|emb|CAQ60878.1| atp-dependent clp protease adaptor protein clps [Ralstonia solanacearum IPO1609] gi|299070917|emb|CBJ42221.1| ATP-dependent Clp protease adapter protein clpS [Ralstonia solanacearum CFBP2957] gi|299077730|emb|CBJ50368.1| ATP-dependent Clp protease adapter protein clpS [Ralstonia solanacearum PSI07] Length = 108 Score = 105 bits (263), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 46/89 (51%), Positives = 63/89 (70%) Query: 49 RFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVY 108 R ++ P +Y+VLL+ND+YTPMEFV+ +LQ +F KD ETA IML VH +G G CG+Y Sbjct: 19 RKEQALKPPAMYKVLLLNDDYTPMEFVVMILQQYFSKDRETATQIMLTVHREGKGVCGIY 78 Query: 109 AYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +IA KV V ++RQ +PLQC+ME+ Sbjct: 79 TRDIAATKVELVSTHARQAGHPLQCVMEE 107 >gi|311107314|ref|YP_003980167.1| ATP-dependent Clp protease adaptor protein ClpS [Achromobacter xylosoxidans A8] gi|310762003|gb|ADP17452.1| ATP-dependent Clp protease adaptor protein ClpS [Achromobacter xylosoxidans A8] gi|317407691|gb|EFV87624.1| ATP-dependent Clp protease adapter protein ClpS [Achromobacter xylosoxidans C54] Length = 104 Score = 105 bits (263), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 46/78 (58%), Positives = 61/78 (78%) Query: 59 LYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVN 118 +Y+VLL+ND+YTPMEFV+ VLQ FF K+HE A IML+VHH+G G CGVY ++A ++ Sbjct: 25 MYQVLLLNDDYTPMEFVVKVLQKFFNKNHEEATRIMLQVHHEGRGVCGVYPRDLAATRIA 84 Query: 119 QVMNYSRQHQYPLQCIME 136 QV Y+R Q+PLQC+ME Sbjct: 85 QVAQYARARQHPLQCVME 102 >gi|17547184|ref|NP_520586.1| ATP-dependent Clp protease adaptor protein ClpS [Ralstonia solanacearum GMI1000] gi|21542317|sp|Q8XWK9|CLPS_RALSO RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|17429486|emb|CAD16172.1| hypothetical atp-dependent clp protease adaptor protein clps [Ralstonia solanacearum GMI1000] gi|299065938|emb|CBJ37119.1| ATP-dependent Clp protease adapter protein clpS [Ralstonia solanacearum CMR15] Length = 108 Score = 105 bits (263), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 46/89 (51%), Positives = 63/89 (70%) Query: 49 RFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVY 108 R ++ P +Y+VLL+ND+YTPMEFV+ +LQ +F KD ETA IML VH +G G CG+Y Sbjct: 19 RKEQALKPPAMYKVLLLNDDYTPMEFVVMILQQYFSKDRETATQIMLTVHREGRGVCGIY 78 Query: 109 AYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +IA KV V ++RQ +PLQC+ME+ Sbjct: 79 TRDIAATKVELVSTHARQAGHPLQCVMEE 107 >gi|145589929|ref|YP_001156526.1| ATP-dependent Clp protease adaptor protein ClpS [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|145048335|gb|ABP34962.1| ATP-dependent Clp protease adaptor protein ClpS [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 118 Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 46/85 (54%), Positives = 65/85 (76%) Query: 53 KVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEI 112 +++ P +Y+VLL+ND+YTPMEFV+ V+Q +F KDHETA IML+VH G G CGV+ ++ Sbjct: 33 QIKAPSMYKVLLLNDDYTPMEFVVMVIQEYFNKDHETATRIMLQVHLVGKGICGVFTRDV 92 Query: 113 AEMKVNQVMNYSRQHQYPLQCIMEQ 137 A KV+QV+ SR+ +PLQC ME+ Sbjct: 93 AATKVHQVIELSREAGHPLQCTMEE 117 >gi|291295834|ref|YP_003507232.1| ATP-dependent Clp protease adaptor protein ClpS [Meiothermus ruber DSM 1279] gi|290470793|gb|ADD28212.1| ATP-dependent Clp protease adaptor protein ClpS [Meiothermus ruber DSM 1279] Length = 98 Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 47/93 (50%), Positives = 62/93 (66%) Query: 46 SEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGEC 105 ++ R + R P Y+VLL+ND+YTPM+FV+ VL +F K A IML+VHH G+G Sbjct: 6 TKTRSQTATRTPPRYKVLLLNDDYTPMDFVVEVLMRYFKKSKLEATRIMLQVHHAGVGVA 65 Query: 106 GVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 GVY +EIAE KVNQVM + +PLQC ME + Sbjct: 66 GVYPFEIAETKVNQVMAAASAEGHPLQCTMEPE 98 >gi|239815631|ref|YP_002944541.1| ATP-dependent Clp protease adaptor protein ClpS [Variovorax paradoxus S110] gi|259491251|sp|C5CLL8|CLPS_VARPS RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|239802208|gb|ACS19275.1| ATP-dependent Clp protease adaptor protein ClpS [Variovorax paradoxus S110] Length = 119 Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 48/88 (54%), Positives = 63/88 (71%) Query: 49 RFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVY 108 R K P++Y+V+++ND+YTPMEFVI VLQ +F KD ETA IMLK+H G G CGVY Sbjct: 29 RRPQKTAPPQMYQVVMLNDDYTPMEFVIVVLQEYFNKDRETATQIMLKIHLDGRGVCGVY 88 Query: 109 AYEIAEMKVNQVMNYSRQHQYPLQCIME 136 + ++A KVNQVM + Q +PLQC+ E Sbjct: 89 SRDLAATKVNQVMEAAHQAGHPLQCVSE 116 >gi|153871083|ref|ZP_02000343.1| ATP-dependent Clp protease adaptor protein ClpS [Beggiatoa sp. PS] gi|152072449|gb|EDN69655.1| ATP-dependent Clp protease adaptor protein ClpS [Beggiatoa sp. PS] Length = 106 Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 48/97 (49%), Positives = 74/97 (76%), Gaps = 2/97 (2%) Query: 41 DNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQ 100 D+ ++ E + SK++ P +Y+V+L+ND+YTPM+FV+H+L+ FF + + A IML+VH + Sbjct: 11 DDVIEEEQK--SKLKRPPMYKVILLNDDYTPMDFVVHILEIFFGMEKDLATHIMLQVHTK 68 Query: 101 GIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 G G CG Y+ EIAE KV QV NY+R++Q+PL CI+E+ Sbjct: 69 GKGICGTYSREIAETKVAQVNNYARENQHPLLCILEK 105 >gi|254465322|ref|ZP_05078733.1| ATP-dependent Clp protease adaptor protein ClpS [Rhodobacterales bacterium Y4I] gi|206686230|gb|EDZ46712.1| ATP-dependent Clp protease adaptor protein ClpS [Rhodobacterales bacterium Y4I] Length = 121 Score = 105 bits (261), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 46/91 (50%), Positives = 66/91 (72%) Query: 48 VRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGV 107 + K + P Y+VLL+ND+YTPMEFV+ VL+ FF H A IML VH +G+ GV Sbjct: 30 TKTRPKTKRPPRYKVLLLNDDYTPMEFVVMVLERFFGMTHAQAFEIMLTVHKKGVAVVGV 89 Query: 108 YAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 +++E+AE KV QVM+++R+HQ+PLQC ME++ Sbjct: 90 FSHEVAETKVGQVMDFARRHQHPLQCTMEKE 120 >gi|84516587|ref|ZP_01003946.1| ATP-dependent Clp protease, adaptor protein ClpS [Loktanella vestfoldensis SKA53] gi|84509623|gb|EAQ06081.1| ATP-dependent Clp protease, adaptor protein ClpS [Loktanella vestfoldensis SKA53] Length = 118 Score = 105 bits (261), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 44/87 (50%), Positives = 67/87 (77%) Query: 52 SKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYE 111 K + P +Y+VL++ND++TPMEFV+HVL+ FF H A +ML VH +G+ GV+++E Sbjct: 32 PKTKRPPMYKVLILNDDFTPMEFVVHVLERFFGLSHAQAFELMLTVHKKGVAVVGVFSHE 91 Query: 112 IAEMKVNQVMNYSRQHQYPLQCIMEQK 138 IAE KV QVM+++++HQ+PLQC ME++ Sbjct: 92 IAETKVAQVMDFAQRHQHPLQCTMEKE 118 >gi|170727045|ref|YP_001761071.1| ATP-dependent Clp protease adaptor protein ClpS [Shewanella woodyi ATCC 51908] gi|238688675|sp|B1KIC5|CLPS_SHEWM RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|169812392|gb|ACA86976.1| ATP-dependent Clp protease adaptor protein ClpS [Shewanella woodyi ATCC 51908] Length = 102 Score = 105 bits (261), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 49/91 (53%), Positives = 65/91 (71%) Query: 47 EVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECG 106 E R S+V P +Y+V+L ND+YTPM+FVI VLQ FF K E A IML +HHQG G CG Sbjct: 11 EERVESEVMPPSMYKVILNNDDYTPMDFVIEVLQLFFKKTEEQATDIMLAIHHQGKGICG 70 Query: 107 VYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 ++ + IAE KV QV ++RQ+Q+PL C +E+ Sbjct: 71 IFPFGIAETKVAQVNQFARQNQHPLLCSLEK 101 >gi|261344322|ref|ZP_05971966.1| ATP-dependent Clp protease adaptor protein ClpS [Providencia rustigianii DSM 4541] gi|282567927|gb|EFB73462.1| ATP-dependent Clp protease adaptor protein ClpS [Providencia rustigianii DSM 4541] Length = 106 Score = 105 bits (261), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 50/102 (49%), Positives = 66/102 (64%), Gaps = 2/102 (1%) Query: 36 GIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIML 95 G + D +EV ++ P +Y+VLL ND+YTPM+FV+ VLQ FF D E A IML Sbjct: 6 GTFKTDTIFKNEVE--QTLQPPSMYKVLLNNDDYTPMDFVVEVLQKFFSFDEERATQIML 63 Query: 96 KVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 VH QG G CGVY E+AE K QV ++R+H+YPL C +E+ Sbjct: 64 DVHFQGKGSCGVYTAEVAETKAAQVNAFAREHEYPLLCTIEK 105 >gi|187929804|ref|YP_001900291.1| ATP-dependent Clp protease adaptor protein ClpS [Ralstonia pickettii 12J] gi|241663930|ref|YP_002982290.1| ATP-dependent Clp protease adaptor protein ClpS [Ralstonia pickettii 12D] gi|309781481|ref|ZP_07676217.1| ATP-dependent Clp protease adaptor protein ClpS [Ralstonia sp. 5_7_47FAA] gi|238691811|sp|B2UAR2|CLPS_RALPJ RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|187726694|gb|ACD27859.1| ATP-dependent Clp protease adaptor protein ClpS [Ralstonia pickettii 12J] gi|240865957|gb|ACS63618.1| ATP-dependent Clp protease adaptor protein ClpS [Ralstonia pickettii 12D] gi|308919894|gb|EFP65555.1| ATP-dependent Clp protease adaptor protein ClpS [Ralstonia sp. 5_7_47FAA] Length = 108 Score = 105 bits (261), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 46/89 (51%), Positives = 63/89 (70%) Query: 49 RFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVY 108 R ++ P +Y+VLL+ND+YTPMEFV+ +LQ +F KD ETA IML VH +G G CG+Y Sbjct: 19 RKEQALKPPAMYKVLLLNDDYTPMEFVVMILQQYFSKDRETATQIMLTVHREGKGVCGLY 78 Query: 109 AYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +IA KV V ++RQ +PLQC+ME+ Sbjct: 79 TRDIAATKVELVSTHARQAGHPLQCVMEE 107 >gi|126733462|ref|ZP_01749209.1| ATP-dependent Clp protease, putative [Roseobacter sp. CCS2] gi|126716328|gb|EBA13192.1| ATP-dependent Clp protease, putative [Roseobacter sp. CCS2] Length = 113 Score = 105 bits (261), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 44/87 (50%), Positives = 67/87 (77%) Query: 52 SKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYE 111 K + P +Y+VL++ND++TPMEFV+HVL+ FF H A +ML VH +G+ GV+++E Sbjct: 27 PKTKRPPMYKVLILNDDFTPMEFVVHVLERFFGLSHAQAFELMLTVHKKGVAVVGVFSHE 86 Query: 112 IAEMKVNQVMNYSRQHQYPLQCIMEQK 138 IAE KV QVM+++++HQ+PLQC ME++ Sbjct: 87 IAETKVAQVMDFAQRHQHPLQCTMEKE 113 >gi|254438854|ref|ZP_05052348.1| ATP-dependent Clp protease adaptor protein ClpS [Octadecabacter antarcticus 307] gi|198254300|gb|EDY78614.1| ATP-dependent Clp protease adaptor protein ClpS [Octadecabacter antarcticus 307] Length = 113 Score = 105 bits (261), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 44/87 (50%), Positives = 67/87 (77%) Query: 52 SKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYE 111 +K + P LY+V+++ND+YTPMEFV+HVL+ FF H+ + IM+ VH +G+ GV+++E Sbjct: 27 TKTKRPPLYKVMILNDDYTPMEFVVHVLERFFSLTHDQSVDIMMAVHKKGLAVVGVFSHE 86 Query: 112 IAEMKVNQVMNYSRQHQYPLQCIMEQK 138 IAE KV QVM+ + +HQ+PLQC ME++ Sbjct: 87 IAETKVAQVMDLAARHQHPLQCTMEKE 113 >gi|293606229|ref|ZP_06688592.1| ATP-dependent Clp protease adaptor protein ClpS [Achromobacter piechaudii ATCC 43553] gi|292815376|gb|EFF74494.1| ATP-dependent Clp protease adaptor protein ClpS [Achromobacter piechaudii ATCC 43553] Length = 104 Score = 105 bits (261), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 46/78 (58%), Positives = 61/78 (78%) Query: 59 LYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVN 118 +Y+VLL+ND+YTPMEFV+ VLQ FF K+HE A IML+VHH+G G CGVY ++A ++ Sbjct: 25 MYQVLLLNDDYTPMEFVVKVLQKFFNKNHEEATRIMLQVHHEGRGVCGVYPRDLAATRIA 84 Query: 119 QVMNYSRQHQYPLQCIME 136 QV Y+R Q+PLQC+ME Sbjct: 85 QVGQYARARQHPLQCVME 102 >gi|121998183|ref|YP_001002970.1| ATP-dependent Clp protease adaptor protein ClpS [Halorhodospira halophila SL1] gi|158514017|sp|A1WWV6|CLPS_HALHL RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|121589588|gb|ABM62168.1| ATP-dependent Clp protease adaptor protein ClpS [Halorhodospira halophila SL1] Length = 106 Score = 105 bits (261), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 45/86 (52%), Positives = 65/86 (75%) Query: 52 SKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYE 111 ++ P +Y+V+L+ND+YTPM+FV+ VLQ FF KD A IML VH +G G CGVY+ + Sbjct: 20 PSLKQPPMYKVVLLNDDYTPMDFVVEVLQRFFNKDRSQATQIMLHVHTRGKGVCGVYSRD 79 Query: 112 IAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +AE KV+QV +Y+R+H++PL C ME+ Sbjct: 80 VAETKVSQVNDYAREHEHPLLCTMEE 105 >gi|325915388|ref|ZP_08177705.1| hypothetical protein XVE_1596 [Xanthomonas vesicatoria ATCC 35937] gi|325538435|gb|EGD10114.1| hypothetical protein XVE_1596 [Xanthomonas vesicatoria ATCC 35937] Length = 126 Score = 104 bits (260), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 55/109 (50%), Positives = 71/109 (65%), Gaps = 1/109 (0%) Query: 29 DSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHE 88 + RM +K E D+ L E +V P Y+VLL+ND+YTPM+FV+ VLQ FF D E Sbjct: 18 NGRMPRKTSHEHDHGLTVEAS-KPEVAPPPRYQVLLLNDDYTPMDFVVTVLQQFFNLDLE 76 Query: 89 TAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 A +ML VH +G G CGVY+ E+AE KV QV +SR +Q+PL C MEQ Sbjct: 77 RATQVMLHVHTRGRGVCGVYSREVAESKVAQVNEFSRMNQHPLLCTMEQ 125 >gi|237749126|ref|ZP_04579606.1| ATP-dependent Clp protease adaptor protein ClpS [Oxalobacter formigenes OXCC13] gi|229380488|gb|EEO30579.1| ATP-dependent Clp protease adaptor protein ClpS [Oxalobacter formigenes OXCC13] Length = 102 Score = 104 bits (260), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 44/87 (50%), Positives = 65/87 (74%) Query: 51 SSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAY 110 ++ ++ P +Y+V+L+ND++TPMEFVI VLQ +F+KD E A IMLKVHH+G G CG++ Sbjct: 15 AAILKAPPMYKVVLLNDDFTPMEFVISVLQEYFFKDREAATRIMLKVHHEGKGICGIFPK 74 Query: 111 EIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +IA KV V+ ++R +PLQC ME+ Sbjct: 75 DIANTKVELVLKHARGEGHPLQCTMEE 101 >gi|121604835|ref|YP_982164.1| ATP-dependent Clp protease adaptor protein ClpS [Polaromonas naphthalenivorans CJ2] gi|120593804|gb|ABM37243.1| ATP-dependent Clp protease adaptor protein ClpS [Polaromonas naphthalenivorans CJ2] Length = 145 Score = 104 bits (260), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 49/97 (50%), Positives = 69/97 (71%), Gaps = 2/97 (2%) Query: 42 NCLDSEV--RFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHH 99 N DS V R K + P++Y+V+L+ND+YTPMEFV+ V+Q FF KD ETA IMLK+H Sbjct: 46 NGGDSVVLERRPQKTKPPQMYQVVLLNDDYTPMEFVVVVIQEFFNKDRETATQIMLKIHL 105 Query: 100 QGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIME 136 G G CGV++ ++A KV+QV +R++ +PLQC+ E Sbjct: 106 DGKGICGVFSRDVAATKVDQVTEAARKNGHPLQCVSE 142 >gi|218548404|ref|YP_002382195.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia fergusonii ATCC 35469] gi|226706568|sp|B7LN49|CLPS_ESCF3 RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|218355945|emb|CAQ88560.1| regulatory protein for ClpA substrate specificity [Escherichia fergusonii ATCC 35469] gi|324113823|gb|EGC07798.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia fergusonii B253] gi|325496825|gb|EGC94684.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia fergusonii ECD227] Length = 106 Score = 104 bits (260), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 49/99 (49%), Positives = 69/99 (69%), Gaps = 2/99 (2%) Query: 39 EFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVH 98 +FD + +VR ++ P +Y+V+LVND+YTPMEFVI VLQ FF D E A +ML VH Sbjct: 9 DFDQLAEDKVR--DALKPPSMYKVILVNDDYTPMEFVIDVLQKFFSYDVERATQLMLTVH 66 Query: 99 HQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +QG CGV+ E+AE KV V NY+R++++PL C +E+ Sbjct: 67 YQGKAICGVFTAEVAETKVAMVNNYARENEHPLLCTLEK 105 >gi|99082374|ref|YP_614528.1| ATP-dependent Clp protease adaptor protein ClpS [Ruegeria sp. TM1040] gi|122397582|sp|Q1GDK0|CLPS_SILST RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|99038654|gb|ABF65266.1| ATP-dependent Clp protease adaptor protein ClpS [Ruegeria sp. TM1040] Length = 113 Score = 104 bits (260), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 54/117 (46%), Positives = 79/117 (67%), Gaps = 7/117 (5%) Query: 21 LMSFIFMADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQ 80 LM + M+D+ + E D L ++ R + + P Y+VLL+ND+YTPMEFV+ VL+ Sbjct: 2 LMQPLMMSDNPDD-----ESDLGLLTKTR--PRTQRPPRYKVLLLNDDYTPMEFVVIVLE 54 Query: 81 NFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 FF +H A IML VH +G+ GV+++E+AE KV QVM+Y+R+HQ+PLQC ME+ Sbjct: 55 RFFGLNHAQAFEIMLTVHKKGLAVVGVFSHEVAETKVAQVMDYARRHQHPLQCTMEK 111 >gi|121611395|ref|YP_999202.1| ATP-dependent Clp protease adaptor protein ClpS [Verminephrobacter eiseniae EF01-2] gi|158514006|sp|A1WRC7|CLPS_VEREI RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|121556035|gb|ABM60184.1| ATP-dependent Clp protease adaptor protein ClpS [Verminephrobacter eiseniae EF01-2] Length = 119 Score = 104 bits (259), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 46/88 (52%), Positives = 65/88 (73%) Query: 49 RFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVY 108 R K P++Y+V+++ND+YTPMEFVI VLQ FF KD ETA IMLK+H G G CGVY Sbjct: 29 RRPEKTPPPQMYQVVMLNDDYTPMEFVIVVLQEFFSKDRETATRIMLKIHLDGKGICGVY 88 Query: 109 AYEIAEMKVNQVMNYSRQHQYPLQCIME 136 ++++A KV+QV++ + + +PLQC+ E Sbjct: 89 SHDVAATKVDQVLDAALKAGHPLQCVSE 116 >gi|119384493|ref|YP_915549.1| ATP-dependent Clp protease adaptor protein ClpS [Paracoccus denitrificans PD1222] gi|119374260|gb|ABL69853.1| ATP-dependent Clp protease adaptor protein ClpS [Paracoccus denitrificans PD1222] Length = 105 Score = 104 bits (259), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 46/91 (50%), Positives = 66/91 (72%) Query: 48 VRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGV 107 V+ + + P +Y+VLL+ND++TPMEFV+HVL+ F +H A IML VH +GI GV Sbjct: 15 VKTRPRTQRPPMYKVLLLNDDFTPMEFVVHVLERLFNMNHAQAIEIMLTVHRKGIAVVGV 74 Query: 108 YAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 +++EIAE KV QVM +R+ Q+PLQC ME++ Sbjct: 75 FSHEIAETKVAQVMELARRQQHPLQCTMEKE 105 >gi|33597157|ref|NP_884800.1| ATP-dependent Clp protease adaptor protein ClpS [Bordetella parapertussis 12822] gi|33601001|ref|NP_888561.1| ATP-dependent Clp protease adaptor protein ClpS [Bordetella bronchiseptica RB50] gi|39931037|sp|Q7W7E8|CLPS_BORPA RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|39931045|sp|Q7WKT7|CLPS_BORBR RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|33566608|emb|CAE37866.1| hypothetical protein BPP2572 [Bordetella parapertussis] gi|33575436|emb|CAE32514.1| hypothetical protein BB2017 [Bordetella bronchiseptica RB50] Length = 104 Score = 104 bits (259), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 45/86 (52%), Positives = 62/86 (72%) Query: 51 SSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAY 110 ++ P +Y+V+L+ND+YTPMEFV+ VLQ FF K+ E A IML+VHH+G CGVY Sbjct: 17 PARTAPPPMYQVVLLNDDYTPMEFVVKVLQKFFGKNSEDATRIMLQVHHEGRAVCGVYPR 76 Query: 111 EIAEMKVNQVMNYSRQHQYPLQCIME 136 ++A ++ QV Y+R Q+PLQCIME Sbjct: 77 DLAATRIAQVSQYARARQHPLQCIME 102 >gi|33593716|ref|NP_881360.1| ATP-dependent Clp protease adaptor protein ClpS [Bordetella pertussis Tohama I] gi|39931026|sp|Q7VVC1|CLPS_BORPE RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|33563789|emb|CAE43031.1| hypothetical protein BP2756 [Bordetella pertussis Tohama I] Length = 104 Score = 104 bits (259), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 45/86 (52%), Positives = 62/86 (72%) Query: 51 SSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAY 110 ++ P +Y+V+L+ND+YTPMEFV+ VLQ FF K+ E A IML+VHH+G CGVY Sbjct: 17 PARTAPPPMYQVVLLNDDYTPMEFVVKVLQKFFGKNSEDATRIMLQVHHEGRAVCGVYPR 76 Query: 111 EIAEMKVNQVMNYSRQHQYPLQCIME 136 ++A ++ QV Y+R Q+PLQCIME Sbjct: 77 DLAATRIAQVSQYARARQHPLQCIME 102 >gi|300113413|ref|YP_003759988.1| ATP-dependent Clp protease adaptor protein ClpS [Nitrosococcus watsonii C-113] gi|299539350|gb|ADJ27667.1| ATP-dependent Clp protease adaptor protein ClpS [Nitrosococcus watsonii C-113] Length = 107 Score = 103 bits (258), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 45/86 (52%), Positives = 63/86 (73%) Query: 52 SKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYE 111 K++ P LY+V+++ND+YTPMEFV+ VLQ FF D A +M +VH +G G CGV+ YE Sbjct: 21 PKLKRPPLYKVVMLNDDYTPMEFVVKVLQTFFAMDRGKATRVMWQVHTEGRGICGVFTYE 80 Query: 112 IAEMKVNQVMNYSRQHQYPLQCIMEQ 137 IAE K +QV YS HQ+PL+C++E+ Sbjct: 81 IAETKASQVNEYSMNHQHPLKCVLER 106 >gi|94311825|ref|YP_585035.1| ATP-dependent Clp protease adaptor protein ClpS [Cupriavidus metallidurans CH34] gi|158564205|sp|Q1LJB0|CLPS_RALME RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|93355677|gb|ABF09766.1| regulatory protein for ClpA substrate specificity [Cupriavidus metallidurans CH34] Length = 108 Score = 103 bits (258), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 44/89 (49%), Positives = 64/89 (71%) Query: 49 RFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVY 108 R +++ P +Y+V+L+ND+YTPMEFV+ +LQ +F +D ETA IML VH +G G CG+Y Sbjct: 19 RKEQQLKPPAMYKVVLLNDDYTPMEFVVMILQQYFSRDRETATQIMLTVHREGKGVCGIY 78 Query: 109 AYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +IA KV V ++RQ +PLQC+ME+ Sbjct: 79 TRDIAATKVELVSTHARQAGHPLQCVMEE 107 >gi|73542438|ref|YP_296958.1| ATP-dependent Clp protease adaptor protein ClpS [Ralstonia eutropha JMP134] gi|123624188|sp|Q46XL9|CLPS_RALEJ RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|72119851|gb|AAZ62114.1| ATP-dependent Clp protease adaptor protein ClpS [Ralstonia eutropha JMP134] Length = 108 Score = 103 bits (258), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 44/89 (49%), Positives = 64/89 (71%) Query: 49 RFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVY 108 R +++ P +Y+V+L+ND+YTPMEFV+ +LQ +F +D ETA IML VH +G G CG+Y Sbjct: 19 RKEQQLKPPAMYKVVLLNDDYTPMEFVVMILQQYFSRDRETATQIMLTVHREGKGVCGIY 78 Query: 109 AYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +IA KV V ++RQ +PLQC+ME+ Sbjct: 79 TRDIAATKVELVSTHARQAGHPLQCVMEE 107 >gi|259417778|ref|ZP_05741697.1| ATP-dependent Clp protease adaptor protein ClpS [Silicibacter sp. TrichCH4B] gi|259346684|gb|EEW58498.1| ATP-dependent Clp protease adaptor protein ClpS [Silicibacter sp. TrichCH4B] Length = 107 Score = 103 bits (258), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 46/90 (51%), Positives = 66/90 (73%) Query: 48 VRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGV 107 + + + P Y+VLL+ND+YTPMEFV+ VL+ FF +H A IML VH +G+ GV Sbjct: 16 TKTRPRTQRPPRYKVLLLNDDYTPMEFVVIVLERFFGLNHAQAFEIMLTVHKKGLAVVGV 75 Query: 108 YAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +++E+AE KV QVM+Y+R+HQ+PLQC ME+ Sbjct: 76 FSHEVAETKVAQVMDYARRHQHPLQCTMEK 105 >gi|237746972|ref|ZP_04577452.1| ATP-dependent Clp protease adaptor protein ClpS [Oxalobacter formigenes HOxBLS] gi|229378323|gb|EEO28414.1| ATP-dependent Clp protease adaptor protein ClpS [Oxalobacter formigenes HOxBLS] Length = 143 Score = 103 bits (258), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 45/87 (51%), Positives = 66/87 (75%) Query: 51 SSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAY 110 ++ ++ P +YRVLL+ND++TPM+FVI VLQ +F+K+ E A IMLKVH +G G CG++ Sbjct: 56 ATVLKPPPMYRVLLLNDDFTPMDFVIFVLQEYFHKNAEMATRIMLKVHREGKGVCGIFPK 115 Query: 111 EIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +IA KV QV+ ++RQ +PLQC ME+ Sbjct: 116 DIANTKVEQVIRHARQEGHPLQCTMEE 142 >gi|188991659|ref|YP_001903669.1| hypothetical protein xccb100_2265 [Xanthomonas campestris pv. campestris str. B100] gi|167733419|emb|CAP51620.1| unnamed protein product [Xanthomonas campestris pv. campestris] Length = 169 Score = 103 bits (257), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 55/109 (50%), Positives = 71/109 (65%), Gaps = 1/109 (0%) Query: 29 DSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHE 88 + RM +K E D+ L E +V P Y+VLL+ND+YTPM+FV+ VLQ FF D E Sbjct: 61 NGRMPRKTSHEHDHGLVVET-SKPEVAPPPRYQVLLLNDDYTPMDFVVTVLQQFFNLDLE 119 Query: 89 TAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 A +ML VH +G G CGVY+ E+AE KV QV +SR +Q+PL C MEQ Sbjct: 120 RATQVMLHVHTRGRGVCGVYSREVAESKVAQVNEFSRMNQHPLLCTMEQ 168 >gi|113969987|ref|YP_733780.1| ATP-dependent Clp protease adaptor protein ClpS [Shewanella sp. MR-4] gi|114047222|ref|YP_737772.1| ATP-dependent Clp protease adaptor protein ClpS [Shewanella sp. MR-7] gi|117920199|ref|YP_869391.1| ATP-dependent Clp protease adaptor protein ClpS [Shewanella sp. ANA-3] gi|123130486|sp|Q0HJP4|CLPS_SHESM RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|123131487|sp|Q0HVZ0|CLPS_SHESR RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|166214747|sp|A0KW16|CLPS_SHESA RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|113884671|gb|ABI38723.1| ATP-dependent Clp protease adaptor protein ClpS [Shewanella sp. MR-4] gi|113888664|gb|ABI42715.1| ATP-dependent Clp protease adaptor protein ClpS [Shewanella sp. MR-7] gi|117612531|gb|ABK47985.1| ATP-dependent Clp protease adaptor protein ClpS [Shewanella sp. ANA-3] Length = 102 Score = 103 bits (257), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 48/91 (52%), Positives = 66/91 (72%) Query: 47 EVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECG 106 E R S++ P +Y+V+L ND+YTPM+FVI VLQ FF K+ + A IML +HHQG G CG Sbjct: 11 EERVESELMPPSMYKVILNNDDYTPMDFVIEVLQIFFRKNEQEATDIMLTIHHQGKGICG 70 Query: 107 VYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 ++ Y IAE KV QV ++RQ+Q+PL C +E+ Sbjct: 71 IFPYGIAETKVIQVNQFARQNQHPLLCSLEK 101 >gi|114332013|ref|YP_748235.1| ATP-dependent Clp protease adaptor protein ClpS [Nitrosomonas eutropha C91] gi|122313284|sp|Q0AEG2|CLPS_NITEC RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|114309027|gb|ABI60270.1| ATP-dependent Clp protease adaptor protein ClpS [Nitrosomonas eutropha C91] Length = 103 Score = 103 bits (257), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 43/87 (49%), Positives = 66/87 (75%) Query: 52 SKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYE 111 +++ P LY+V+L+ND++TPM+FV+ VL++FF+ D E A IMLK+H +G G CG Y + Sbjct: 17 TRLTPPPLYKVILINDDFTPMDFVVKVLRHFFFMDEEMATRIMLKIHTEGAGICGTYPGD 76 Query: 112 IAEMKVNQVMNYSRQHQYPLQCIMEQK 138 IA KV QV +S+Q+Q+PL C+ME++ Sbjct: 77 IAATKVQQVNEFSKQNQHPLMCVMEKE 103 >gi|313201916|ref|YP_004040574.1| ATP-dependent clp protease adaptor protein clps [Methylovorus sp. MP688] gi|312441232|gb|ADQ85338.1| ATP-dependent Clp protease adaptor protein ClpS [Methylovorus sp. MP688] Length = 77 Score = 103 bits (257), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 46/75 (61%), Positives = 60/75 (80%) Query: 63 LLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMN 122 +L+ND+YTPMEFV+ V+Q FF K E A IMLKVH +G G CGVY ++IAE KVNQV+ Sbjct: 2 ILLNDDYTPMEFVVEVIQRFFNKSREQATQIMLKVHTEGAGICGVYPHDIAETKVNQVLG 61 Query: 123 YSRQHQYPLQCIMEQ 137 Y+R++Q+PLQC ME+ Sbjct: 62 YAREYQHPLQCAMEE 76 >gi|126725142|ref|ZP_01740985.1| ATP-dependent Clp protease adaptor protein ClpS [Rhodobacterales bacterium HTCC2150] gi|126706306|gb|EBA05396.1| ATP-dependent Clp protease adaptor protein ClpS [Rhodobacterales bacterium HTCC2150] Length = 115 Score = 103 bits (257), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 49/102 (48%), Positives = 72/102 (70%), Gaps = 4/102 (3%) Query: 41 DNCLDSEVRFSSKVRV----PKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLK 96 D+ +SE ++K R P +Y+VLL+ND+YTPMEFV+HVL+ FF ++ A IML Sbjct: 13 DDGDNSEGDVATKTRARTKRPPMYKVLLLNDDYTPMEFVVHVLERFFGINNAQAVEIMLT 72 Query: 97 VHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 VH +G+ GV+++EIAEMKV QVM+ + Q ++PLQC E++ Sbjct: 73 VHKKGMAVVGVFSHEIAEMKVTQVMDLAHQQEHPLQCTFEKE 114 >gi|126174686|ref|YP_001050835.1| ATP-dependent Clp protease adaptor protein ClpS [Shewanella baltica OS155] gi|153000985|ref|YP_001366666.1| ATP-dependent Clp protease adaptor protein ClpS [Shewanella baltica OS185] gi|160875698|ref|YP_001555014.1| ATP-dependent Clp protease adaptor protein ClpS [Shewanella baltica OS195] gi|217973055|ref|YP_002357806.1| ATP-dependent Clp protease adaptor protein ClpS [Shewanella baltica OS223] gi|304409063|ref|ZP_07390684.1| ATP-dependent Clp protease adaptor protein ClpS [Shewanella baltica OS183] gi|307303066|ref|ZP_07582821.1| ATP-dependent Clp protease adaptor protein ClpS [Shewanella baltica BA175] gi|166214743|sp|A3D5F3|CLPS_SHEB5 RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|166214744|sp|A6WP64|CLPS_SHEB8 RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|189082478|sp|A9L4G4|CLPS_SHEB9 RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|254763824|sp|B8E950|CLPS_SHEB2 RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|125997891|gb|ABN61966.1| ATP-dependent Clp protease adaptor protein ClpS [Shewanella baltica OS155] gi|151365603|gb|ABS08603.1| ATP-dependent Clp protease adaptor protein ClpS [Shewanella baltica OS185] gi|160861220|gb|ABX49754.1| ATP-dependent Clp protease adaptor protein ClpS [Shewanella baltica OS195] gi|217498190|gb|ACK46383.1| ATP-dependent Clp protease adaptor protein ClpS [Shewanella baltica OS223] gi|304352884|gb|EFM17281.1| ATP-dependent Clp protease adaptor protein ClpS [Shewanella baltica OS183] gi|306913426|gb|EFN43848.1| ATP-dependent Clp protease adaptor protein ClpS [Shewanella baltica BA175] gi|315267887|gb|ADT94740.1| ATP-dependent Clp protease adaptor protein ClpS [Shewanella baltica OS678] Length = 102 Score = 103 bits (257), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 49/101 (48%), Positives = 70/101 (69%) Query: 37 IAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLK 96 +A+ N E R S++ P +Y+V+L ND+YTPM+FVI VLQ FF K+ + A IML Sbjct: 1 MAKIGNIEHVEERVESELMPPSMYKVVLNNDDYTPMDFVIEVLQVFFRKNEQEATDIMLT 60 Query: 97 VHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +HHQG G CG++ + IAE KV QV ++RQ+Q+PL C +E+ Sbjct: 61 IHHQGKGICGIFPFGIAETKVIQVNQFARQNQHPLLCSLEK 101 >gi|254450586|ref|ZP_05064023.1| ATP-dependent Clp protease adaptor protein ClpS [Octadecabacter antarcticus 238] gi|198264992|gb|EDY89262.1| ATP-dependent Clp protease adaptor protein ClpS [Octadecabacter antarcticus 238] Length = 107 Score = 103 bits (257), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 44/87 (50%), Positives = 66/87 (75%) Query: 52 SKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYE 111 +K + P LY+V+++ND+YTPMEFV+HVL+ FF H+ + IML VH +G+ GV+++E Sbjct: 21 TKTKRPPLYKVMILNDDYTPMEFVVHVLERFFSLTHDQSVEIMLAVHKKGLAVVGVFSHE 80 Query: 112 IAEMKVNQVMNYSRQHQYPLQCIMEQK 138 IAE KV VM+ + +HQ+PLQC ME++ Sbjct: 81 IAETKVALVMDLAARHQHPLQCTMEKE 107 >gi|257095587|ref|YP_003169228.1| ATP-dependent Clp protease adaptor protein ClpS [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257048111|gb|ACV37299.1| ATP-dependent Clp protease adaptor protein ClpS [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 102 Score = 103 bits (256), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 45/87 (51%), Positives = 64/87 (73%) Query: 51 SSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAY 110 ++++ P LY+VLL+ND++TPM+FVI VLQ FF D E A IMLKVH +G G CGV+ Sbjct: 15 PTQLKPPPLYKVLLLNDDFTPMDFVIVVLQRFFGMDREHATRIMLKVHTEGRGVCGVFPR 74 Query: 111 EIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 ++A KV QV ++R +Q+PL C+ME+ Sbjct: 75 DVAATKVEQVTTFARSNQHPLACVMEE 101 >gi|311280209|ref|YP_003942440.1| ATP-dependent Clp protease adaptor protein ClpS [Enterobacter cloacae SCF1] gi|308749404|gb|ADO49156.1| ATP-dependent Clp protease adaptor protein ClpS [Enterobacter cloacae SCF1] Length = 106 Score = 103 bits (256), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 49/99 (49%), Positives = 67/99 (67%), Gaps = 2/99 (2%) Query: 39 EFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVH 98 +FD +VR ++ P +Y+V+LVND+YTPMEFVI VLQ FF D E A +ML VH Sbjct: 9 DFDQLTKDQVR--DALKPPAMYKVILVNDDYTPMEFVIDVLQKFFSYDVERATQLMLTVH 66 Query: 99 HQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +QG CGV+ E+AE KV V Y+R++++PL C +EQ Sbjct: 67 YQGKAICGVFTAEVAETKVAMVNQYARENEHPLLCTLEQ 105 >gi|288941931|ref|YP_003444171.1| ATP-dependent Clp protease adaptor protein ClpS [Allochromatium vinosum DSM 180] gi|288897303|gb|ADC63139.1| ATP-dependent Clp protease adaptor protein ClpS [Allochromatium vinosum DSM 180] Length = 107 Score = 103 bits (256), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 47/86 (54%), Positives = 64/86 (74%) Query: 52 SKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYE 111 K+R P LY+VLL+ND+YTPMEFV+ VL+ FF + E A +ML VH +G+G CGV+ + Sbjct: 21 PKLRRPPLYKVLLLNDDYTPMEFVVLVLEIFFGMNREKATQVMLHVHTRGVGVCGVFTKD 80 Query: 112 IAEMKVNQVMNYSRQHQYPLQCIMEQ 137 IAE KV QV +Y+R +Q+PL C ME+ Sbjct: 81 IAETKVAQVNDYARGNQHPLMCTMEE 106 >gi|15838043|ref|NP_298731.1| ATP-dependent Clp protease adaptor protein ClpS [Xylella fastidiosa 9a5c] gi|12230825|sp|Q9PDD7|CLPS_XYLFA RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|9106460|gb|AAF84251.1|AE003974_6 conserved hypothetical protein [Xylella fastidiosa 9a5c] Length = 106 Score = 103 bits (256), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 54/106 (50%), Positives = 71/106 (66%), Gaps = 1/106 (0%) Query: 32 MNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAK 91 M++K + + DN L E ++KV P Y+VLL+ND+YTPM+FVI VLQ FF D + A Sbjct: 1 MSQKTVHDQDNALLLETG-NTKVAPPPRYQVLLLNDDYTPMDFVIVVLQQFFAMDLKKAT 59 Query: 92 CIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +ML VH +G G CG Y E+AE KV QV +SR HQ+PL C M+Q Sbjct: 60 QVMLHVHTRGCGVCGFYTREVAESKVAQVNEFSRIHQHPLLCTMKQ 105 >gi|163737216|ref|ZP_02144634.1| ATP-dependent Clp protease adaptor protein ClpS [Phaeobacter gallaeciensis BS107] gi|163740373|ref|ZP_02147767.1| ATP-dependent Clp protease, adaptor protein ClpS [Phaeobacter gallaeciensis 2.10] gi|161386231|gb|EDQ10606.1| ATP-dependent Clp protease, adaptor protein ClpS [Phaeobacter gallaeciensis 2.10] gi|161389820|gb|EDQ14171.1| ATP-dependent Clp protease adaptor protein ClpS [Phaeobacter gallaeciensis BS107] Length = 113 Score = 103 bits (256), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 47/98 (47%), Positives = 67/98 (68%) Query: 41 DNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQ 100 D L + K + P Y+VLL+ND+YTPMEFV+ VL+ FF H A +ML VH + Sbjct: 15 DTDLGVLTKTRPKTQRPPRYKVLLLNDDYTPMEFVVMVLERFFNMTHAEAFEVMLTVHKK 74 Query: 101 GIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 G+ GV+++EIAE KV QVM+++ +HQ+PLQC ME++ Sbjct: 75 GVAVVGVFSHEIAETKVGQVMDFAHRHQHPLQCTMEKE 112 >gi|239994276|ref|ZP_04714800.1| ATP-dependent Clp protease adaptor protein ClpS [Alteromonas macleodii ATCC 27126] gi|238693285|sp|B4S1R5|CLPS_ALTMD RecName: Full=ATP-dependent Clp protease adapter protein ClpS Length = 106 Score = 103 bits (256), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 48/85 (56%), Positives = 60/85 (70%) Query: 53 KVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEI 112 K + P +Y+VLL ND+YTPM+FVI VL FF D E A +ML VH+QG CG++ EI Sbjct: 21 KPQPPPMYKVLLNNDDYTPMDFVIEVLMQFFNMDAEKANQLMLTVHYQGKAVCGIFTAEI 80 Query: 113 AEMKVNQVMNYSRQHQYPLQCIMEQ 137 AE KV QV Y+R+HQ+PL C MEQ Sbjct: 81 AETKVMQVNQYARKHQHPLMCTMEQ 105 >gi|153864221|ref|ZP_01997190.1| ATP-dependent Clp protease adaptor protein ClpS [Beggiatoa sp. SS] gi|152146285|gb|EDN72811.1| ATP-dependent Clp protease adaptor protein ClpS [Beggiatoa sp. SS] Length = 106 Score = 102 bits (255), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 44/86 (51%), Positives = 65/86 (75%) Query: 52 SKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYE 111 K++ P LY+V+L+ND+YTPM+FV+HVL+NFF + + A +ML+VH +G G CG Y + Sbjct: 20 PKLKRPPLYKVVLLNDDYTPMDFVVHVLENFFGMNQDLANHVMLQVHLEGKGICGTYTRD 79 Query: 112 IAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +AE KV QV Y+R++Q+PL C ME+ Sbjct: 80 VAETKVTQVNTYARENQHPLLCTMEK 105 >gi|28198572|ref|NP_778886.1| ATP-dependent Clp protease adaptor protein ClpS [Xylella fastidiosa Temecula1] gi|71274782|ref|ZP_00651070.1| ATP-dependent Clp protease adaptor protein ClpS [Xylella fastidiosa Dixon] gi|71897611|ref|ZP_00679856.1| ATP-dependent Clp protease adaptor protein ClpS [Xylella fastidiosa Ann-1] gi|71901078|ref|ZP_00683187.1| ATP-dependent Clp protease adaptor protein ClpS [Xylella fastidiosa Ann-1] gi|170729972|ref|YP_001775405.1| ATP-dependent Clp protease adaptor protein ClpS [Xylella fastidiosa M12] gi|182681253|ref|YP_001829413.1| ATP-dependent Clp protease adaptor protein ClpS [Xylella fastidiosa M23] gi|32130316|sp|Q87DL8|CLPS_XYLFT RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|238687979|sp|B0U6Q9|CLPS_XYLFM RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|238691117|sp|B2I9Y0|CLPS_XYLF2 RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|28056656|gb|AAO28535.1| conserved hypothetical protein [Xylella fastidiosa Temecula1] gi|71164514|gb|EAO14228.1| ATP-dependent Clp protease adaptor protein ClpS [Xylella fastidiosa Dixon] gi|71729160|gb|EAO31282.1| ATP-dependent Clp protease adaptor protein ClpS [Xylella fastidiosa Ann-1] gi|71732514|gb|EAO34567.1| ATP-dependent Clp protease adaptor protein ClpS [Xylella fastidiosa Ann-1] gi|167964765|gb|ACA11775.1| conserved hypothetical protein [Xylella fastidiosa M12] gi|182631363|gb|ACB92139.1| ATP-dependent Clp protease adaptor protein ClpS [Xylella fastidiosa M23] gi|307579703|gb|ADN63672.1| ATP-dependent Clp protease adaptor protein ClpS [Xylella fastidiosa subsp. fastidiosa GB514] Length = 106 Score = 102 bits (255), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 54/106 (50%), Positives = 71/106 (66%), Gaps = 1/106 (0%) Query: 32 MNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAK 91 M++K + + DN L E ++KV P Y+VLL+ND+YTPM+FVI VLQ FF D + A Sbjct: 1 MSQKTVHDQDNALLLETG-NTKVAPPPRYQVLLLNDDYTPMDFVIVVLQQFFAMDLKKAT 59 Query: 92 CIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +ML VH +G G CG Y E+AE KV QV +SR HQ+PL C M+Q Sbjct: 60 QVMLHVHTRGRGVCGFYTREVAESKVAQVNEFSRIHQHPLLCTMKQ 105 >gi|226939299|ref|YP_002794370.1| ATP-dependent Clp protease adaptor protein ClpS [Laribacter hongkongensis HLHK9] gi|226714223|gb|ACO73361.1| ATP-dependent Clp protease adaptor protein ClpS [Laribacter hongkongensis HLHK9] Length = 103 Score = 102 bits (255), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 43/90 (47%), Positives = 66/90 (73%), Gaps = 2/90 (2%) Query: 51 SSKVRV--PKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVY 108 SK+R P +Y+V+L+ND++TPM+FV+ VL+ FFY E A +MLK+H +G G CG + Sbjct: 13 PSKIRTAPPPMYKVVLLNDDFTPMDFVVIVLERFFYMGREQATQVMLKIHTEGRGICGTF 72 Query: 109 AYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 ++A KV+QV +Y+R H++PLQC+ME+ Sbjct: 73 TRDVAATKVSQVRDYARTHEHPLQCVMEES 102 >gi|114320604|ref|YP_742287.1| ATP-dependent Clp protease adaptor protein ClpS [Alkalilimnicola ehrlichii MLHE-1] gi|122311718|sp|Q0A8P0|CLPS_ALHEH RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|114226998|gb|ABI56797.1| ATP-dependent Clp protease adaptor protein ClpS [Alkalilimnicola ehrlichii MLHE-1] Length = 106 Score = 102 bits (255), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 42/87 (48%), Positives = 66/87 (75%) Query: 51 SSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAY 110 +V+ P L++V+++ND+YTPM+FV+ VLQ FF+ D A +ML VH +G G CGV++ Sbjct: 19 PPQVKRPPLFKVIILNDDYTPMDFVVEVLQKFFHMDRARATQVMLHVHTRGEGVCGVFSR 78 Query: 111 EIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 ++AE KVNQV ++SRQH++PL C +++ Sbjct: 79 DVAETKVNQVNDWSRQHEHPLMCTLKE 105 >gi|330446454|ref|ZP_08310106.1| specificity factor for ClpA-ClpP chaperone-protease complex [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328490645|dbj|GAA04603.1| specificity factor for ClpA-ClpP chaperone-protease complex [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 106 Score = 102 bits (255), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 45/85 (52%), Positives = 62/85 (72%) Query: 53 KVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEI 112 +V+ P +Y+V+L ND+YTPM+FVI VLQ FF D E A +ML VH++G CG + E+ Sbjct: 21 QVKPPSMYKVILNNDDYTPMDFVIDVLQTFFSMDLEKAAQLMLAVHYEGKAVCGTFTAEV 80 Query: 113 AEMKVNQVMNYSRQHQYPLQCIMEQ 137 AE KV QVM Y+R+H++PL C ME+ Sbjct: 81 AETKVAQVMMYAREHEHPLLCTMEK 105 >gi|148977557|ref|ZP_01814136.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrionales bacterium SWAT-3] gi|145963208|gb|EDK28475.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrionales bacterium SWAT-3] Length = 106 Score = 102 bits (255), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 46/87 (52%), Positives = 64/87 (73%) Query: 51 SSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAY 110 ++KV+ P +Y V+L ND+YTPM+FVI +L+ FF D E A +MLKVH++G CG Y+ Sbjct: 19 ATKVKPPAMYNVVLNNDDYTPMDFVIEILERFFSLDIEKATEVMLKVHYEGKAICGTYSA 78 Query: 111 EIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 EIAE KV QV YS+++++PL C MEQ Sbjct: 79 EIAETKVAQVTMYSKENEHPLLCTMEQ 105 >gi|90579120|ref|ZP_01234930.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio angustum S14] gi|90439953|gb|EAS65134.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio angustum S14] Length = 106 Score = 102 bits (255), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 45/85 (52%), Positives = 62/85 (72%) Query: 53 KVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEI 112 +V+ P +Y+V+L ND+YTPM+FVI VLQ FF D E A +ML VH++G CG + E+ Sbjct: 21 QVKPPSMYKVILNNDDYTPMDFVIEVLQTFFSMDLEKAAQLMLAVHYEGKAICGTFTAEV 80 Query: 113 AEMKVNQVMNYSRQHQYPLQCIMEQ 137 AE KV QVM Y+R+H++PL C ME+ Sbjct: 81 AETKVAQVMMYAREHEHPLLCTMEK 105 >gi|89073385|ref|ZP_01159909.1| ATP-dependent Clp protease adaptor protein ClpS [Photobacterium sp. SKA34] gi|89050872|gb|EAR56346.1| ATP-dependent Clp protease adaptor protein ClpS [Photobacterium sp. SKA34] Length = 106 Score = 102 bits (255), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 45/85 (52%), Positives = 62/85 (72%) Query: 53 KVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEI 112 +V+ P +Y+V+L ND+YTPM+FVI VLQ FF D E A +ML VH++G CG + E+ Sbjct: 21 QVKPPSMYKVILNNDDYTPMDFVIEVLQTFFSMDLEKAAQLMLAVHYEGKAICGTFTAEV 80 Query: 113 AEMKVNQVMNYSRQHQYPLQCIMEQ 137 AE KV QVM Y+R+H++PL C ME+ Sbjct: 81 AETKVAQVMMYAREHEHPLLCTMEK 105 >gi|212709755|ref|ZP_03317883.1| hypothetical protein PROVALCAL_00803 [Providencia alcalifaciens DSM 30120] gi|212687566|gb|EEB47094.1| hypothetical protein PROVALCAL_00803 [Providencia alcalifaciens DSM 30120] Length = 106 Score = 102 bits (255), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 50/102 (49%), Positives = 65/102 (63%), Gaps = 2/102 (1%) Query: 36 GIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIML 95 G + D EV ++ P +Y+VLL ND+YTPM+FV+ VLQ +F D E A IML Sbjct: 6 GTFKTDTIFKDEVE--KALQPPSMYKVLLNNDDYTPMDFVVEVLQKYFSFDEERATQIML 63 Query: 96 KVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 VH QG G CGVY EIAE K QV ++R+H+YPL C +E+ Sbjct: 64 DVHFQGKGVCGVYTAEIAETKAAQVNAFAREHEYPLLCTIEK 105 >gi|120598597|ref|YP_963171.1| ATP-dependent Clp protease adaptor protein ClpS [Shewanella sp. W3-18-1] gi|146293324|ref|YP_001183748.1| ATP-dependent Clp protease adaptor protein ClpS [Shewanella putrefaciens CN-32] gi|166214746|sp|A4Y7L6|CLPS_SHEPC RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|166214748|sp|A1RIX2|CLPS_SHESW RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|120558690|gb|ABM24617.1| ATP-dependent Clp protease adaptor protein ClpS [Shewanella sp. W3-18-1] gi|145565014|gb|ABP75949.1| ATP-dependent Clp protease adaptor protein ClpS [Shewanella putrefaciens CN-32] gi|319426624|gb|ADV54698.1| ATP-dependent Clp protease adaptor protein ClpS [Shewanella putrefaciens 200] Length = 102 Score = 102 bits (254), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 47/91 (51%), Positives = 66/91 (72%) Query: 47 EVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECG 106 E R S++ P +Y+V+L ND+YTPM+FVI VLQ FF K+ + A IML +HHQG G CG Sbjct: 11 EERVESELMPPSMYKVILNNDDYTPMDFVIEVLQVFFRKNEQEATDIMLTIHHQGKGICG 70 Query: 107 VYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 ++ + IAE KV QV ++RQ+Q+PL C +E+ Sbjct: 71 IFPFGIAETKVIQVNQFARQNQHPLLCSLEK 101 >gi|323190703|gb|EFZ75972.1| ATP-dependent Clp protease adaptor protein ClpS family protein [Escherichia coli RN587/1] Length = 106 Score = 102 bits (254), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 48/99 (48%), Positives = 68/99 (68%), Gaps = 2/99 (2%) Query: 39 EFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVH 98 +FD + +VR ++ P +Y+V+LVND+YTPMEFVI VLQ FF D E A +ML VH Sbjct: 9 DFDQLAEEKVR--DALKPPSMYKVILVNDDYTPMEFVIDVLQKFFSYDVERATQLMLAVH 66 Query: 99 HQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +QG CGV+ E+AE KV V Y+R++++PL C +E+ Sbjct: 67 YQGKAICGVFTAEVAETKVTMVNKYARENEHPLLCTLEK 105 >gi|16759817|ref|NP_455434.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|16764306|ref|NP_459921.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|29142410|ref|NP_805752.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56414003|ref|YP_151078.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|62179469|ref|YP_215886.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161614825|ref|YP_001588790.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|167550381|ref|ZP_02344138.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|167992164|ref|ZP_02573262.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168230818|ref|ZP_02655876.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|168236855|ref|ZP_02661913.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|168240792|ref|ZP_02665724.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|168263570|ref|ZP_02685543.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|168466528|ref|ZP_02700390.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|168819925|ref|ZP_02831925.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|194444791|ref|YP_002040145.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194450386|ref|YP_002044938.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194470024|ref|ZP_03076008.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194734739|ref|YP_002114001.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197247594|ref|YP_002145862.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197264687|ref|ZP_03164761.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197362926|ref|YP_002142563.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|198243258|ref|YP_002214872.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|204929828|ref|ZP_03220849.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|207856339|ref|YP_002242990.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|213021515|ref|ZP_03335962.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] gi|213052429|ref|ZP_03345307.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213419934|ref|ZP_03353000.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] gi|213428022|ref|ZP_03360772.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213581370|ref|ZP_03363196.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] gi|213620715|ref|ZP_03373498.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] gi|213649852|ref|ZP_03379905.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|213865354|ref|ZP_03387473.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Typhi str. M223] gi|224582756|ref|YP_002636554.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|238913424|ref|ZP_04657261.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|289825000|ref|ZP_06544363.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|54036861|sp|P67650|CLPS_SALTI RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|54041058|sp|P67649|CLPS_SALTY RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|67460139|sp|Q57R56|CLPS_SALCH RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|67460197|sp|Q5PGK0|CLPS_SALPA RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|189082477|sp|A9N7Z5|CLPS_SALPB RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|238689929|sp|B5BBT0|CLPS_SALPK RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|238690018|sp|B5F127|CLPS_SALA4 RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|238690349|sp|B5FQ21|CLPS_SALDC RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|238690424|sp|B5QYM8|CLPS_SALEP RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|238690613|sp|B4TD06|CLPS_SALHS RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|238693573|sp|B4T0G6|CLPS_SALNS RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|238693662|sp|B4TRR1|CLPS_SALSV RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|254763823|sp|C0PXR3|CLPS_SALPC RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|25321103|pir||AH0609 conserved hypothetical protein STY0942 [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16419456|gb|AAL19880.1| putative cytoplasmic protein [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|16502110|emb|CAD05346.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Typhi] gi|29138040|gb|AAO69601.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56128260|gb|AAV77766.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|62127102|gb|AAX64805.1| putative cytoplasmic protein [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161364189|gb|ABX67957.1| hypothetical protein SPAB_02578 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194403454|gb|ACF63676.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194408690|gb|ACF68909.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194456388|gb|EDX45227.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194710241|gb|ACF89462.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|195630880|gb|EDX49466.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197094403|emb|CAR59919.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|197211297|gb|ACH48694.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197242942|gb|EDY25562.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197290191|gb|EDY29548.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|197937774|gb|ACH75107.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|204320822|gb|EDZ06023.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205324512|gb|EDZ12351.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205329607|gb|EDZ16371.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205334903|gb|EDZ21667.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|205340436|gb|EDZ27200.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205343076|gb|EDZ29840.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205347686|gb|EDZ34317.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|206708142|emb|CAR32435.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|224467283|gb|ACN45113.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|261246161|emb|CBG23965.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267992673|gb|ACY87558.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301157489|emb|CBW16979.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312911934|dbj|BAJ35908.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|320085181|emb|CBY94968.1| ATP-dependent Clp protease adapter protein clpS [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|321223269|gb|EFX48338.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|322616381|gb|EFY13290.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322619631|gb|EFY16506.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322622673|gb|EFY19518.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322628586|gb|EFY25373.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322631522|gb|EFY28278.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322637049|gb|EFY33752.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322641753|gb|EFY38389.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322644455|gb|EFY40995.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322649575|gb|EFY46006.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322654123|gb|EFY50446.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322658038|gb|EFY54305.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322663512|gb|EFY59714.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322670248|gb|EFY66388.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322671484|gb|EFY67606.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322676840|gb|EFY72907.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322682765|gb|EFY78784.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322686444|gb|EFY82426.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|322713939|gb|EFZ05510.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] gi|323129211|gb|ADX16641.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|323196102|gb|EFZ81265.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323196752|gb|EFZ81896.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323202968|gb|EFZ88002.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323209009|gb|EFZ93946.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323211914|gb|EFZ96742.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323215154|gb|EFZ99899.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323222357|gb|EGA06735.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323226878|gb|EGA11061.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323229832|gb|EGA13955.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323233057|gb|EGA17153.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323240792|gb|EGA24834.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323243109|gb|EGA27129.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323247430|gb|EGA31386.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323251652|gb|EGA35519.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323257360|gb|EGA41058.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323261949|gb|EGA45515.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323267964|gb|EGA51443.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323271969|gb|EGA55384.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] gi|326622625|gb|EGE28970.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Dublin str. 3246] Length = 106 Score = 102 bits (254), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 48/99 (48%), Positives = 68/99 (68%), Gaps = 2/99 (2%) Query: 39 EFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVH 98 +FD ++ VR ++ P +Y+V+LVND+YTPMEFVI VLQ FF D E A +ML VH Sbjct: 9 DFDQLVEDSVR--DALKPPSMYKVILVNDDYTPMEFVIDVLQKFFSYDVERATQLMLAVH 66 Query: 99 HQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +QG CGV+ E+AE KV V Y+R++++PL C +E+ Sbjct: 67 YQGKAICGVFTAEVAETKVAMVNKYARENEHPLLCTLEK 105 >gi|126740638|ref|ZP_01756325.1| ATP-dependent Clp protease, adaptor protein ClpS [Roseobacter sp. SK209-2-6] gi|126718439|gb|EBA15154.1| ATP-dependent Clp protease, adaptor protein ClpS [Roseobacter sp. SK209-2-6] Length = 121 Score = 102 bits (254), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 49/100 (49%), Positives = 69/100 (69%), Gaps = 2/100 (2%) Query: 41 DNCLDSEV--RFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVH 98 D+ D+ V + K + P Y+VLL+ND+YTPMEFV+ VL+ FF H A IML VH Sbjct: 21 DDDADTGVLTKTRPKTKRPPRYKVLLLNDDYTPMEFVVMVLERFFSMTHAEAFDIMLTVH 80 Query: 99 HQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 +G+ GV+ +EIAE KV QVM+++ +HQ+PLQC ME++ Sbjct: 81 KKGLAVVGVFTHEIAETKVAQVMDFAGRHQHPLQCTMEKE 120 >gi|53804154|ref|YP_114226.1| ATP-dependent Clp protease adaptor protein ClpS [Methylococcus capsulatus str. Bath] gi|67460232|sp|Q607H2|CLPS_METCA RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|53757915|gb|AAU92206.1| ATP-dependent Clp protease adaptor protein ClpS [Methylococcus capsulatus str. Bath] Length = 106 Score = 102 bits (254), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 45/86 (52%), Positives = 65/86 (75%) Query: 52 SKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYE 111 KV+ P LY+V+L+ND++TPMEFV+HVL FF + E A +ML VH +G+G CGV++ + Sbjct: 20 PKVKRPPLYKVMLLNDDFTPMEFVVHVLMLFFGMNEEKATQVMLHVHTRGVGVCGVFSKD 79 Query: 112 IAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +AE KV QV ++RQ+Q+PL C ME+ Sbjct: 80 VAETKVQQVNAHARQNQHPLLCTMEE 105 >gi|238897684|ref|YP_002923363.1| regulatory protein for ClpA substrate specificity [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|229465441|gb|ACQ67215.1| regulatory protein for ClpA substrate specificity [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 105 Score = 102 bits (254), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 49/106 (46%), Positives = 71/106 (66%), Gaps = 2/106 (1%) Query: 32 MNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAK 91 MNK G F++ L+ + S V+ P +Y+V+L ND+YTPMEFV+ VLQNFF + E A Sbjct: 1 MNKNGGLNFEHLLNEQE--ISAVKPPDMYKVILNNDDYTPMEFVVDVLQNFFSYNLEQAT 58 Query: 92 CIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +MLKVH+QG CG + E+AE KV V Y+R++++P C +E+ Sbjct: 59 ALMLKVHYQGKAICGTFTAEVAETKVASVNQYARENEHPFLCTLEK 104 >gi|24374169|ref|NP_718212.1| hypothetical protein SO_2627 [Shewanella oneidensis MR-1] gi|37077213|sp|Q8EDW4|CLPS_SHEON RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|24348676|gb|AAN55656.1|AE015704_7 conserved hypothetical protein [Shewanella oneidensis MR-1] Length = 102 Score = 102 bits (254), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 47/91 (51%), Positives = 66/91 (72%) Query: 47 EVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECG 106 E R S++ P +Y+V+L ND+YTPM+FVI VLQ FF K+ + A IML +HHQG G CG Sbjct: 11 EERVESELMPPSMYKVILNNDDYTPMDFVIEVLQIFFRKNEQEATDIMLTIHHQGKGICG 70 Query: 107 VYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 ++ + IAE KV QV ++RQ+Q+PL C +E+ Sbjct: 71 IFPFGIAETKVIQVNQFARQNQHPLLCSLEK 101 >gi|127512494|ref|YP_001093691.1| ATP-dependent Clp protease adaptor protein ClpS [Shewanella loihica PV-4] gi|166214745|sp|A3QD84|CLPS_SHELP RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|126637789|gb|ABO23432.1| ATP-dependent Clp protease adaptor protein ClpS [Shewanella loihica PV-4] Length = 102 Score = 102 bits (254), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 47/91 (51%), Positives = 66/91 (72%) Query: 47 EVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECG 106 E R +++ P +Y+V+L ND+YTPM+FVI VLQ FF K+ + A IML +HHQG G CG Sbjct: 11 EERAETELMPPSMYKVILNNDDYTPMDFVIEVLQLFFNKNEQEATDIMLAIHHQGKGICG 70 Query: 107 VYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 V+ + IAE KV QV ++RQ+Q+PL C +E+ Sbjct: 71 VFPFGIAETKVAQVNQFARQNQHPLLCSLEK 101 >gi|94985574|ref|YP_604938.1| ATP-dependent Clp protease adaptor protein ClpS [Deinococcus geothermalis DSM 11300] gi|94555855|gb|ABF45769.1| ATP-dependent Clp protease adaptor protein ClpS [Deinococcus geothermalis DSM 11300] Length = 113 Score = 102 bits (254), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 47/107 (43%), Positives = 67/107 (62%), Gaps = 1/107 (0%) Query: 31 RMNKK-GIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHET 89 RM ++ G + R + + P+LYRVLL+ND+YTPM+FV+ VLQ +F K Sbjct: 2 RMTRRDGEGRTGTLERAGTREQTTTQRPRLYRVLLLNDDYTPMDFVVEVLQTYFRKSETE 61 Query: 90 AKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIME 136 A+ IML VHH+G G GVY ++AE KV QV ++R+ YPL+ + E Sbjct: 62 AQLIMLAVHHKGQGVAGVYTRDVAETKVAQVTAHARRAGYPLRLVAE 108 >gi|88798703|ref|ZP_01114286.1| substrate modulator for ClpAP, directs protease activity towards aggregated proteins [Reinekea sp. MED297] gi|88778466|gb|EAR09658.1| substrate modulator for ClpAP, directs protease activity towards aggregated proteins [Reinekea sp. MED297] Length = 113 Score = 102 bits (254), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 45/85 (52%), Positives = 63/85 (74%) Query: 53 KVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEI 112 +++ P LYRV+L+ND+YTPMEFV+H+L+ FF + E A +ML VH QG G CGVY +I Sbjct: 23 ELKRPSLYRVVLLNDDYTPMEFVVHILEQFFAMNREKATQVMLAVHTQGKGVCGVYTKDI 82 Query: 113 AEMKVNQVMNYSRQHQYPLQCIMEQ 137 AE K V +YSR++Q+PL C +E+ Sbjct: 83 AETKAALVNDYSRENQHPLLCEVEE 107 >gi|113869007|ref|YP_727496.1| ATP-dependent Clp protease adaptor protein ClpS [Ralstonia eutropha H16] gi|194290613|ref|YP_002006520.1| ATP-dependent clp protease adaptor protein clps [Cupriavidus taiwanensis LMG 19424] gi|123133653|sp|Q0K793|CLPS_RALEH RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|238692769|sp|B3R6C0|CLPS_CUPTR RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|113527783|emb|CAJ94128.1| ATP-dependent Clp protease adaptor protein [Ralstonia eutropha H16] gi|193224448|emb|CAQ70459.1| ATP-dependent Clp protease substrate specificity regulator [Cupriavidus taiwanensis LMG 19424] Length = 108 Score = 102 bits (254), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 43/89 (48%), Positives = 63/89 (70%) Query: 49 RFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVY 108 R ++ P +++V+L+ND+YTPMEFV+ +LQ +F +D ETA IML VH +G G CG+Y Sbjct: 19 RKEQALKPPAMFKVVLLNDDYTPMEFVVMILQQYFSRDRETATQIMLTVHREGKGVCGIY 78 Query: 109 AYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +IA KV V ++RQ +PLQC+ME+ Sbjct: 79 TRDIAATKVELVSTHARQAGHPLQCVMEE 107 >gi|167623651|ref|YP_001673945.1| ATP-dependent Clp protease adaptor protein ClpS [Shewanella halifaxensis HAW-EB4] gi|189082479|sp|B0TQ07|CLPS_SHEHH RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|167353673|gb|ABZ76286.1| ATP-dependent Clp protease adaptor protein ClpS [Shewanella halifaxensis HAW-EB4] Length = 102 Score = 102 bits (254), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 46/97 (47%), Positives = 67/97 (69%) Query: 41 DNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQ 100 +N E ++ + P +Y+V+L ND+YTPM+FVI +LQ FF KD + A IML +HH+ Sbjct: 5 ENIEQIEESVEAEFKQPSMYKVILNNDDYTPMDFVIEILQLFFKKDEQQATEIMLAIHHK 64 Query: 101 GIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 G G CG+Y + IAE KV QV ++RQ+Q+PL C +E+ Sbjct: 65 GKGICGIYPFGIAETKVAQVNQFARQNQHPLLCSLEE 101 >gi|254475794|ref|ZP_05089180.1| ATP-dependent Clp protease adaptor protein ClpS [Ruegeria sp. R11] gi|214030037|gb|EEB70872.1| ATP-dependent Clp protease adaptor protein ClpS [Ruegeria sp. R11] Length = 107 Score = 102 bits (253), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 45/87 (51%), Positives = 64/87 (73%) Query: 52 SKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYE 111 K + P Y+VLL+ND+YTPMEFV+ VL+ FF H A +ML VH +G+ GV+++E Sbjct: 20 PKTQRPPRYKVLLLNDDYTPMEFVVMVLERFFNMTHAEAFEVMLTVHKKGVAVVGVFSHE 79 Query: 112 IAEMKVNQVMNYSRQHQYPLQCIMEQK 138 IAE KV QVM+++ +HQ+PLQC ME++ Sbjct: 80 IAETKVGQVMDFAHRHQHPLQCTMEKE 106 >gi|161503926|ref|YP_001571038.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|189082476|sp|A9MI06|CLPS_SALAR RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|160865273|gb|ABX21896.1| hypothetical protein SARI_02017 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 106 Score = 102 bits (253), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 47/99 (47%), Positives = 69/99 (69%), Gaps = 2/99 (2%) Query: 39 EFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVH 98 +FD ++ ++R ++ P +Y+V+LVND+YTPMEFVI VLQ FF D E A +ML VH Sbjct: 9 DFDQLVEDDLR--DALKPPSMYKVILVNDDYTPMEFVIDVLQKFFSYDVERATQLMLAVH 66 Query: 99 HQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +QG CGV+ E+AE KV V Y+R++++PL C +E+ Sbjct: 67 YQGKAICGVFTAEVAETKVEMVNQYARENEHPLLCTLEK 105 >gi|228311827|pdb|2W9R|A Chain A, Structural Basis Of N-End Rule Substrate Recognition In Escherichia Coli By The Clpap Adaptor Protein Clps gi|228311836|pdb|2WA9|A Chain A, Structural Basis Of N-End Rule Substrate Recognition In Escherichia Coli By The Clpap Adaptor Protein Clps - Trp Peptide Structure gi|228311837|pdb|2WA9|B Chain B, Structural Basis Of N-End Rule Substrate Recognition In Escherichia Coli By The Clpap Adaptor Protein Clps - Trp Peptide Structure gi|228311838|pdb|2WA9|C Chain C, Structural Basis Of N-End Rule Substrate Recognition In Escherichia Coli By The Clpap Adaptor Protein Clps - Trp Peptide Structure gi|228311839|pdb|2WA9|D Chain D, Structural Basis Of N-End Rule Substrate Recognition In Escherichia Coli By The Clpap Adaptor Protein Clps - Trp Peptide Structure gi|228311840|pdb|2WA9|E Chain E, Structural Basis Of N-End Rule Substrate Recognition In Escherichia Coli By The Clpap Adaptor Protein Clps - Trp Peptide Structure gi|228311841|pdb|2WA9|F Chain F, Structural Basis Of N-End Rule Substrate Recognition In Escherichia Coli By The Clpap Adaptor Protein Clps - Trp Peptide Structure gi|228311842|pdb|2WA9|G Chain G, Structural Basis Of N-End Rule Substrate Recognition In Escherichia Coli By The Clpap Adaptor Protein Clps - Trp Peptide Structure Length = 108 Score = 102 bits (253), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 48/99 (48%), Positives = 68/99 (68%), Gaps = 2/99 (2%) Query: 39 EFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVH 98 +FD + +VR ++ P +Y+V+LVND+YTPMEFVI VLQ FF D E A +ML VH Sbjct: 9 DFDQLAEEKVR--DALKPPSMYKVILVNDDYTPMEFVIDVLQKFFSYDVERATQLMLAVH 66 Query: 99 HQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +QG CGV+ E+AE KV V Y+R++++PL C +E+ Sbjct: 67 YQGKAICGVFTAEVAETKVAMVNKYARENEHPLLCTLEK 105 >gi|46580012|ref|YP_010820.1| ATP-dependent Clp protease adaptor protein ClpS [Desulfovibrio vulgaris str. Hildenborough] gi|120602577|ref|YP_966977.1| ATP-dependent Clp protease adaptor protein ClpS [Desulfovibrio vulgaris DP4] gi|67460332|sp|Q72BN4|CLPS_DESVH RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|166214734|sp|A1VDN4|CLPS_DESVV RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|46449428|gb|AAS96079.1| ATP-dependent Clp protease adaptor protein ClpS [Desulfovibrio vulgaris str. Hildenborough] gi|120562806|gb|ABM28550.1| ATP-dependent Clp protease adaptor protein ClpS [Desulfovibrio vulgaris DP4] gi|311233989|gb|ADP86843.1| ATP-dependent Clp protease adaptor protein ClpS [Desulfovibrio vulgaris RCH1] Length = 104 Score = 102 bits (253), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 46/93 (49%), Positives = 61/93 (65%) Query: 45 DSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGE 104 DS++ VR+P++YRVLL ND+YT MEFV+ +L F K E A IML VH G+GE Sbjct: 11 DSDILVEDDVRLPRMYRVLLHNDDYTTMEFVVSILVEVFRKTAEQATAIMLAVHRDGVGE 70 Query: 105 CGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 CGVY +E+AE K V +R+ YPL+C E+ Sbjct: 71 CGVYTFEVAETKAAIVHARARREGYPLRCSTEE 103 >gi|193071768|ref|ZP_03052664.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli E110019] gi|192954925|gb|EDV85432.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli E110019] Length = 106 Score = 102 bits (253), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 48/99 (48%), Positives = 68/99 (68%), Gaps = 2/99 (2%) Query: 39 EFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVH 98 +FD + +VR ++ P +Y+V+LVND+YTPMEFVI VLQ FF D E A +ML VH Sbjct: 9 DFDQVAEEKVR--DALKPPSMYKVILVNDDYTPMEFVIDVLQKFFSYDVERATQLMLAVH 66 Query: 99 HQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +QG CGV+ E+AE KV V Y+R++++PL C +E+ Sbjct: 67 YQGKAICGVFTAEVAETKVAMVNKYARENEHPLLCTLEK 105 >gi|228311830|pdb|2WA8|A Chain A, Structural Basis Of N-End Rule Substrate Recognition In Escherichia Coli By The Clpap Adaptor Protein Clps - The Phe Peptide Structure gi|228311832|pdb|2WA8|C Chain C, Structural Basis Of N-End Rule Substrate Recognition In Escherichia Coli By The Clpap Adaptor Protein Clps - The Phe Peptide Structure Length = 107 Score = 102 bits (253), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 48/99 (48%), Positives = 68/99 (68%), Gaps = 2/99 (2%) Query: 39 EFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVH 98 +FD + +VR ++ P +Y+V+LVND+YTPMEFVI VLQ FF D E A +ML VH Sbjct: 9 DFDQLAEEKVR--DALKPPSMYKVILVNDDYTPMEFVIDVLQKFFSYDVERATQLMLAVH 66 Query: 99 HQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +QG CGV+ E+AE KV V Y+R++++PL C +E+ Sbjct: 67 YQGKAICGVFTAEVAETKVAMVNKYARENEHPLLCTLEK 105 >gi|157146439|ref|YP_001453758.1| ATP-dependent Clp protease adaptor protein ClpS [Citrobacter koseri ATCC BAA-895] gi|166214733|sp|A8AIK9|CLPS_CITK8 RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|157083644|gb|ABV13322.1| hypothetical protein CKO_02199 [Citrobacter koseri ATCC BAA-895] Length = 106 Score = 102 bits (253), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 48/99 (48%), Positives = 68/99 (68%), Gaps = 2/99 (2%) Query: 39 EFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVH 98 +FD + +VR ++ P +Y+V+LVND+YTPMEFVI VLQ FF D E A +ML VH Sbjct: 9 DFDQLAEDKVR--DALKPPSMYKVILVNDDYTPMEFVIDVLQKFFSYDVERATQLMLAVH 66 Query: 99 HQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +QG CGV+ E+AE KV V Y+R++++PL C +E+ Sbjct: 67 YQGKAICGVFTAEVAETKVAMVNKYARENEHPLLCTLEK 105 >gi|329298246|ref|ZP_08255582.1| ATP-dependent Clp protease adaptor protein ClpS [Plautia stali symbiont] Length = 106 Score = 102 bits (253), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 50/105 (47%), Positives = 69/105 (65%), Gaps = 2/105 (1%) Query: 33 NKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKC 92 N F+ + +VR ++ P +Y+V+L ND+YTPMEFVI VLQ FF D E A Sbjct: 3 NTNDWLNFERLAEDKVR--EGLKPPSMYKVILNNDDYTPMEFVIDVLQKFFSYDVERATQ 60 Query: 93 IMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +MLKVH+ G CGV+ E+AE KV QV NY+R++Q+PL C +E+ Sbjct: 61 LMLKVHYHGKAICGVFTAEVAETKVAQVNNYARENQHPLLCTLEK 105 >gi|15800639|ref|NP_286653.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli O157:H7 EDL933] gi|15830221|ref|NP_308994.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli O157:H7 str. Sakai] gi|16128849|ref|NP_415402.1| regulatory protein for ClpA substrate specificity [Escherichia coli str. K-12 substr. MG1655] gi|24112257|ref|NP_706767.1| ATP-dependent Clp protease adaptor protein ClpS [Shigella flexneri 2a str. 301] gi|26246907|ref|NP_752947.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli CFT073] gi|30062369|ref|NP_836540.1| ATP-dependent Clp protease adaptor protein ClpS [Shigella flexneri 2a str. 2457T] gi|74311440|ref|YP_309859.1| ATP-dependent Clp protease adaptor protein ClpS [Shigella sonnei Ss046] gi|82543368|ref|YP_407315.1| ATP-dependent Clp protease adaptor protein ClpS [Shigella boydii Sb227] gi|82777596|ref|YP_403945.1| ATP-dependent Clp protease adaptor protein ClpS [Shigella dysenteriae Sd197] gi|89107732|ref|AP_001512.1| regulatory protein for ClpA substrate specificity [Escherichia coli str. K-12 substr. W3110] gi|91209918|ref|YP_539904.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli UTI89] gi|110641082|ref|YP_668812.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli 536] gi|110804883|ref|YP_688403.1| ATP-dependent Clp protease adaptor protein ClpS [Shigella flexneri 5 str. 8401] gi|117623059|ref|YP_851972.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli APEC O1] gi|157156472|ref|YP_001462078.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli E24377A] gi|157160404|ref|YP_001457722.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli HS] gi|168752462|ref|ZP_02777484.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli O157:H7 str. EC4113] gi|168759050|ref|ZP_02784057.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli O157:H7 str. EC4401] gi|168769874|ref|ZP_02794881.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli O157:H7 str. EC4486] gi|168777871|ref|ZP_02802878.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli O157:H7 str. EC4196] gi|168783792|ref|ZP_02808799.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli O157:H7 str. EC4076] gi|168789133|ref|ZP_02814140.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli O157:H7 str. EC869] gi|168802712|ref|ZP_02827719.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli O157:H7 str. EC508] gi|170020716|ref|YP_001725670.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli ATCC 8739] gi|170080540|ref|YP_001729860.1| regulatory protein for ClpA substrate specificity [Escherichia coli str. K-12 substr. DH10B] gi|170683903|ref|YP_001744326.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli SMS-3-5] gi|187732054|ref|YP_001880921.1| ATP-dependent Clp protease adaptor protein ClpS [Shigella boydii CDC 3083-94] gi|188493236|ref|ZP_03000506.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli 53638] gi|191167602|ref|ZP_03029413.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli B7A] gi|191172151|ref|ZP_03033695.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli F11] gi|193064650|ref|ZP_03045729.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli E22] gi|194428349|ref|ZP_03060890.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli B171] gi|194433088|ref|ZP_03065370.1| ATP-dependent Clp protease adaptor protein ClpS [Shigella dysenteriae 1012] gi|194438739|ref|ZP_03070826.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli 101-1] gi|195939544|ref|ZP_03084926.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli O157:H7 str. EC4024] gi|208807982|ref|ZP_03250319.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli O157:H7 str. EC4206] gi|208815975|ref|ZP_03257154.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli O157:H7 str. EC4045] gi|208822627|ref|ZP_03262946.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli O157:H7 str. EC4042] gi|209399503|ref|YP_002269555.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli O157:H7 str. EC4115] gi|209918130|ref|YP_002292214.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli SE11] gi|217326428|ref|ZP_03442512.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli O157:H7 str. TW14588] gi|218553467|ref|YP_002386380.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli IAI1] gi|218557785|ref|YP_002390698.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli S88] gi|218688663|ref|YP_002396875.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli ED1a] gi|218694355|ref|YP_002402022.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli 55989] gi|218700603|ref|YP_002408232.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli IAI39] gi|218704310|ref|YP_002411829.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli UMN026] gi|227884153|ref|ZP_04001958.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli 83972] gi|238900140|ref|YP_002925936.1| regulatory protein for ClpA substrate specificity [Escherichia coli BW2952] gi|253774089|ref|YP_003036920.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254160996|ref|YP_003044104.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli B str. REL606] gi|254792082|ref|YP_003076919.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli O157:H7 str. TW14359] gi|256020998|ref|ZP_05434863.1| ATP-dependent Clp protease adaptor protein ClpS [Shigella sp. D9] gi|256023492|ref|ZP_05437357.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia sp. 4_1_40B] gi|260843132|ref|YP_003220910.1| regulatory protein ClpS for ClpA substrate specificity [Escherichia coli O103:H2 str. 12009] gi|260854173|ref|YP_003228064.1| regulatory protein ClpS for ClpA substrate specificity [Escherichia coli O26:H11 str. 11368] gi|260867054|ref|YP_003233456.1| regulatory protein ClpS for ClpA substrate specificity [Escherichia coli O111:H- str. 11128] gi|261225537|ref|ZP_05939818.1| regulatory protein for ClpA substrate specificity [Escherichia coli O157:H7 str. FRIK2000] gi|261258494|ref|ZP_05951027.1| regulatory protein ClpS for ClpA substrate specificity [Escherichia coli O157:H7 str. FRIK966] gi|291281885|ref|YP_003498703.1| ATP-dependent Clp protease adapter protein clpS [Escherichia coli O55:H7 str. CB9615] gi|293404189|ref|ZP_06648183.1| ClpS [Escherichia coli FVEC1412] gi|293409260|ref|ZP_06652836.1| conserved hypothetical protein [Escherichia coli B354] gi|293414164|ref|ZP_06656813.1| ATP-dependent Clp protease adapter protein ClpS [Escherichia coli B185] gi|293433179|ref|ZP_06661607.1| ATP-dependent Clp protease adapter protein ClpS [Escherichia coli B088] gi|297516224|ref|ZP_06934610.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli OP50] gi|298379970|ref|ZP_06989575.1| ATP-dependent Clp protease adapter protein ClpS [Escherichia coli FVEC1302] gi|300817017|ref|ZP_07097236.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli MS 107-1] gi|300823619|ref|ZP_07103746.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli MS 119-7] gi|300895696|ref|ZP_07114292.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli MS 198-1] gi|300902417|ref|ZP_07120399.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli MS 84-1] gi|300921087|ref|ZP_07137471.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli MS 115-1] gi|300922550|ref|ZP_07138651.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli MS 182-1] gi|300928422|ref|ZP_07143955.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli MS 187-1] gi|300935725|ref|ZP_07150693.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli MS 21-1] gi|300950109|ref|ZP_07164055.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli MS 116-1] gi|300954436|ref|ZP_07166888.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli MS 175-1] gi|300978555|ref|ZP_07174308.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli MS 45-1] gi|300991762|ref|ZP_07179625.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli MS 200-1] gi|301020523|ref|ZP_07184607.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli MS 69-1] gi|301024394|ref|ZP_07188081.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli MS 196-1] gi|301051189|ref|ZP_07198019.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli MS 185-1] gi|301305345|ref|ZP_07211440.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli MS 124-1] gi|301328605|ref|ZP_07221666.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli MS 78-1] gi|301646325|ref|ZP_07246213.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli MS 146-1] gi|306812669|ref|ZP_07446862.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli NC101] gi|307137509|ref|ZP_07496865.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli H736] gi|307311731|ref|ZP_07591371.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli W] gi|309783999|ref|ZP_07678643.1| ATP-dependent Clp protease adaptor ClpS family protein [Shigella dysenteriae 1617] gi|309795322|ref|ZP_07689740.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli MS 145-7] gi|312969050|ref|ZP_07783257.1| ATP-dependent Clp protease adaptor ClpS family protein [Escherichia coli 2362-75] gi|312971008|ref|ZP_07785187.1| ATP-dependent Clp protease adaptor ClpS family protein [Escherichia coli 1827-70] gi|331641402|ref|ZP_08342537.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli H736] gi|331646149|ref|ZP_08347252.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli M605] gi|331651900|ref|ZP_08352919.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli M718] gi|331656953|ref|ZP_08357915.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli TA206] gi|331662295|ref|ZP_08363218.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli TA143] gi|331667255|ref|ZP_08368120.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli TA271] gi|331676669|ref|ZP_08377365.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli H591] gi|331682390|ref|ZP_08383009.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli H299] gi|67462206|sp|P0A8Q6|CLPS_ECOLI RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|67462207|sp|P0A8Q7|CLPS_ECOL6 RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|67462208|sp|P0A8Q8|CLPS_ECO57 RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|67462209|sp|P0A8Q9|CLPS_SHIFL RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|122424438|sp|Q1RE41|CLPS_ECOUT RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|123049335|sp|Q0TJG8|CLPS_ECOL5 RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|123343208|sp|Q0T8P4|CLPS_SHIF8 RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|123560128|sp|Q323M1|CLPS_SHIBS RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|123562126|sp|Q32E01|CLPS_SHIDS RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|123617606|sp|Q3Z3N8|CLPS_SHISS RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|158512538|sp|A1A9B8|CLPS_ECOK1 RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|167008653|sp|A7ZJU9|CLPS_ECO24 RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|167008654|sp|A7ZYI5|CLPS_ECOHS RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|189082474|sp|B1IWP1|CLPS_ECOLC RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|226706563|sp|B7MHI7|CLPS_ECO45 RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|226706564|sp|B7NM96|CLPS_ECO7I RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|226706565|sp|B7M809|CLPS_ECO8A RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|226706566|sp|B7NAN2|CLPS_ECOLU RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|226706567|sp|B1LKM9|CLPS_ECOSM RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|229889820|sp|B1X822|CLPS_ECODH RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|238066650|sp|B5YSH7|CLPS_ECO5E RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|238066651|sp|B6I8V2|CLPS_ECOSE RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|238691691|sp|B2TUJ7|CLPS_SHIB3 RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|254763816|sp|B7LD74|CLPS_ECO55 RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|254763817|sp|B7MRT8|CLPS_ECO81 RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|259491246|sp|C4ZY53|CLPS_ECOBW RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|27573865|pdb|1MBU|C Chain C, Crystal Structure Analysis Of Clpsn Heterodimer gi|27573866|pdb|1MBU|D Chain D, Crystal Structure Analysis Of Clpsn Heterodimer gi|27573868|pdb|1MBV|B Chain B, Crystal Structure Analysis Of Clpsn Heterodimer Tetragonal Form gi|27573871|pdb|1MBX|C Chain C, Crystal Structure Analysis Of Clpsn With Transition Metal Ion Bound gi|27573872|pdb|1MBX|D Chain D, Crystal Structure Analysis Of Clpsn With Transition Metal Ion Bound gi|61679804|pdb|1R6O|C Chain C, Atp-Dependent Clp Protease Atp-Binding Subunit ClpaATP- Dependent Clp Protease Adaptor Protein Clps gi|61679805|pdb|1R6O|D Chain D, Atp-Dependent Clp Protease Atp-Binding Subunit ClpaATP- Dependent Clp Protease Adaptor Protein Clps gi|61679808|pdb|1R6Q|C Chain C, Clpns With Fragments gi|61679809|pdb|1R6Q|D Chain D, Clpns With Fragments gi|12513911|gb|AAG55263.1|AE005269_7 orf, hypothetical protein [Escherichia coli O157:H7 str. EDL933] gi|26107307|gb|AAN79490.1|AE016758_94 Protein yljA [Escherichia coli CFT073] gi|1787108|gb|AAC73968.1| regulatory protein for ClpA substrate specificity [Escherichia coli str. K-12 substr. MG1655] gi|4062464|dbj|BAA35600.1| regulatory protein for ClpA substrate specificity [Escherichia coli str. K12 substr. W3110] gi|13360426|dbj|BAB34390.1| hypothetical protein [Escherichia coli O157:H7 str. Sakai] gi|24051108|gb|AAN42474.1| orf, conserved hypothetical protein [Shigella flexneri 2a str. 301] gi|30040614|gb|AAP16346.1| hypothetical protein S0881 [Shigella flexneri 2a str. 2457T] gi|73854917|gb|AAZ87624.1| conserved hypothetical protein [Shigella sonnei Ss046] gi|81241744|gb|ABB62454.1| conserved hypothetical protein [Shigella dysenteriae Sd197] gi|81244779|gb|ABB65487.1| conserved hypothetical protein [Shigella boydii Sb227] gi|91071492|gb|ABE06373.1| ATP-dependent Clp protease adaptor protein [Escherichia coli UTI89] gi|110342674|gb|ABG68911.1| hypothetical protein YljA [Escherichia coli 536] gi|110614431|gb|ABF03098.1| conserved hypothetical protein [Shigella flexneri 5 str. 8401] gi|115512183|gb|ABJ00258.1| conserved hypothetical protein [Escherichia coli APEC O1] gi|157066084|gb|ABV05339.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli HS] gi|157078502|gb|ABV18210.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli E24377A] gi|169755644|gb|ACA78343.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli ATCC 8739] gi|169888375|gb|ACB02082.1| regulatory protein for ClpA substrate specificity [Escherichia coli str. K-12 substr. DH10B] gi|170521621|gb|ACB19799.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli SMS-3-5] gi|187429046|gb|ACD08320.1| ATP-dependent Clp protease adaptor protein ClpS [Shigella boydii CDC 3083-94] gi|187766992|gb|EDU30836.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli O157:H7 str. EC4196] gi|188013696|gb|EDU51818.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli O157:H7 str. EC4113] gi|188488435|gb|EDU63538.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli 53638] gi|188998902|gb|EDU67888.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli O157:H7 str. EC4076] gi|189354287|gb|EDU72706.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli O157:H7 str. EC4401] gi|189361171|gb|EDU79590.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli O157:H7 str. EC4486] gi|189371156|gb|EDU89572.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli O157:H7 str. EC869] gi|189375364|gb|EDU93780.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli O157:H7 str. EC508] gi|190902363|gb|EDV62101.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli B7A] gi|190907678|gb|EDV67273.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli F11] gi|192927707|gb|EDV82322.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli E22] gi|194413564|gb|EDX29845.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli B171] gi|194418585|gb|EDX34672.1| ATP-dependent Clp protease adaptor protein ClpS [Shigella dysenteriae 1012] gi|194422371|gb|EDX38371.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli 101-1] gi|208727783|gb|EDZ77384.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli O157:H7 str. EC4206] gi|208732623|gb|EDZ81311.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli O157:H7 str. EC4045] gi|208738112|gb|EDZ85795.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli O157:H7 str. EC4042] gi|209160903|gb|ACI38336.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli O157:H7 str. EC4115] gi|209775128|gb|ACI85876.1| hypothetical protein ECs0967 [Escherichia coli] gi|209775130|gb|ACI85877.1| hypothetical protein ECs0967 [Escherichia coli] gi|209775132|gb|ACI85878.1| hypothetical protein ECs0967 [Escherichia coli] gi|209775134|gb|ACI85879.1| hypothetical protein ECs0967 [Escherichia coli] gi|209775136|gb|ACI85880.1| hypothetical protein ECs0967 [Escherichia coli] gi|209911389|dbj|BAG76463.1| conserved hypothetical protein [Escherichia coli SE11] gi|217322649|gb|EEC31073.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli O157:H7 str. TW14588] gi|218351087|emb|CAU96791.1| regulatory protein for ClpA substrate specificity [Escherichia coli 55989] gi|218360235|emb|CAQ97785.1| regulatory protein for ClpA substrate specificity [Escherichia coli IAI1] gi|218364554|emb|CAR02238.1| regulatory protein for ClpA substrate specificity [Escherichia coli S88] gi|218370589|emb|CAR18396.1| regulatory protein for ClpA substrate specificity [Escherichia coli IAI39] gi|218426227|emb|CAR07052.1| regulatory protein for ClpA substrate specificity [Escherichia coli ED1a] gi|218431407|emb|CAR12285.1| regulatory protein for ClpA substrate specificity [Escherichia coli UMN026] gi|222032610|emb|CAP75349.1| ATP-dependent Clp protease adaptor protein clpS [Escherichia coli LF82] gi|227838905|gb|EEJ49371.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli 83972] gi|238863441|gb|ACR65439.1| regulatory protein for ClpA substrate specificity [Escherichia coli BW2952] gi|242376696|emb|CAQ31409.1| specificity factor for ClpA-ClpP chaperone-protease complex [Escherichia coli BL21(DE3)] gi|253325133|gb|ACT29735.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253972897|gb|ACT38568.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli B str. REL606] gi|253977111|gb|ACT42781.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli BL21(DE3)] gi|254591482|gb|ACT70843.1| regulatory protein for ClpA substrate specificity [Escherichia coli O157:H7 str. TW14359] gi|257752822|dbj|BAI24324.1| regulatory protein ClpS for ClpA substrate specificity [Escherichia coli O26:H11 str. 11368] gi|257758279|dbj|BAI29776.1| regulatory protein ClpS for ClpA substrate specificity [Escherichia coli O103:H2 str. 12009] gi|257763410|dbj|BAI34905.1| regulatory protein ClpS for ClpA substrate specificity [Escherichia coli O111:H- str. 11128] gi|260449972|gb|ACX40394.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli DH1] gi|281600210|gb|ADA73194.1| ATP-dependent Clp protease adapter protein clpS [Shigella flexneri 2002017] gi|284920735|emb|CBG33798.1| ATP-dependent Clp protease adaptor protein [Escherichia coli 042] gi|290761758|gb|ADD55719.1| ATP-dependent Clp protease adapter protein clpS [Escherichia coli O55:H7 str. CB9615] gi|291323998|gb|EFE63420.1| ATP-dependent Clp protease adapter protein ClpS [Escherichia coli B088] gi|291428775|gb|EFF01800.1| ClpS [Escherichia coli FVEC1412] gi|291434222|gb|EFF07195.1| ATP-dependent Clp protease adapter protein ClpS [Escherichia coli B185] gi|291469728|gb|EFF12212.1| conserved hypothetical protein [Escherichia coli B354] gi|294493941|gb|ADE92697.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli IHE3034] gi|298279668|gb|EFI21176.1| ATP-dependent Clp protease adapter protein ClpS [Escherichia coli FVEC1302] gi|299880401|gb|EFI88612.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli MS 196-1] gi|300297210|gb|EFJ53595.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli MS 185-1] gi|300305516|gb|EFJ60036.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli MS 200-1] gi|300318586|gb|EFJ68370.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli MS 175-1] gi|300360365|gb|EFJ76235.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli MS 198-1] gi|300398656|gb|EFJ82194.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli MS 69-1] gi|300405449|gb|EFJ88987.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli MS 84-1] gi|300409634|gb|EFJ93172.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli MS 45-1] gi|300411938|gb|EFJ95248.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli MS 115-1] gi|300421096|gb|EFK04407.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli MS 182-1] gi|300450524|gb|EFK14144.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli MS 116-1] gi|300459088|gb|EFK22581.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli MS 21-1] gi|300463585|gb|EFK27078.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli MS 187-1] gi|300523819|gb|EFK44888.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli MS 119-7] gi|300530369|gb|EFK51431.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli MS 107-1] gi|300839363|gb|EFK67123.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli MS 124-1] gi|300844997|gb|EFK72757.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli MS 78-1] gi|301075428|gb|EFK90234.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli MS 146-1] gi|305853432|gb|EFM53871.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli NC101] gi|306908286|gb|EFN38785.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli W] gi|307552724|gb|ADN45499.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli ABU 83972] gi|307627693|gb|ADN71997.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli UM146] gi|308120972|gb|EFO58234.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli MS 145-7] gi|308928142|gb|EFP73605.1| ATP-dependent Clp protease adaptor ClpS family protein [Shigella dysenteriae 1617] gi|309701158|emb|CBJ00458.1| ATP-dependent Clp protease adaptor protein [Escherichia coli ETEC H10407] gi|310336769|gb|EFQ01936.1| ATP-dependent Clp protease adaptor ClpS family protein [Escherichia coli 1827-70] gi|312286452|gb|EFR14365.1| ATP-dependent Clp protease adaptor ClpS family protein [Escherichia coli 2362-75] gi|312945399|gb|ADR26226.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli O83:H1 str. NRG 857C] gi|313650206|gb|EFS14618.1| ATP-dependent Clp protease adaptor ClpS family protein [Shigella flexneri 2a str. 2457T] gi|315060167|gb|ADT74494.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli W] gi|315135530|dbj|BAJ42689.1| ATP-dependent Clp protease adapter protein clpS [Escherichia coli DH1] gi|315257919|gb|EFU37887.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli MS 85-1] gi|315287285|gb|EFU46696.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli MS 110-3] gi|315291075|gb|EFU50438.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli MS 153-1] gi|315296657|gb|EFU55952.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli MS 16-3] gi|315619193|gb|EFU99772.1| ATP-dependent Clp protease adaptor ClpS family protein [Escherichia coli 3431] gi|320175322|gb|EFW50428.1| ATP-dependent Clp protease adaptor protein ClpS [Shigella dysenteriae CDC 74-1112] gi|320180599|gb|EFW55528.1| ATP-dependent Clp protease adaptor protein ClpS [Shigella boydii ATCC 9905] gi|320183180|gb|EFW58038.1| ATP-dependent Clp protease adaptor protein ClpS [Shigella flexneri CDC 796-83] gi|320192633|gb|EFW67274.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli O157:H7 str. EC1212] gi|320196624|gb|EFW71247.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli WV_060327] gi|320202276|gb|EFW76847.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli EC4100B] gi|320637752|gb|EFX07544.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli O157:H7 str. G5101] gi|320642875|gb|EFX12076.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli O157:H- str. 493-89] gi|320648332|gb|EFX16987.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli O157:H- str. H 2687] gi|320654170|gb|EFX22238.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320659794|gb|EFX27350.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli O55:H7 str. USDA 5905] gi|320664264|gb|EFX31415.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli O157:H7 str. LSU-61] gi|323155745|gb|EFZ41914.1| ATP-dependent Clp protease adaptor ClpS family protein [Escherichia coli EPECa14] gi|323159506|gb|EFZ45486.1| ATP-dependent Clp protease adaptor protein ClpS family protein [Escherichia coli E128010] gi|323165818|gb|EFZ51604.1| ATP-dependent Clp protease adaptor ClpS family protein [Shigella sonnei 53G] gi|323172148|gb|EFZ57786.1| ATP-dependent Clp protease adaptor protein ClpS family protein [Escherichia coli LT-68] gi|323175497|gb|EFZ61092.1| ATP-dependent Clp protease adaptor protein ClpS family protein [Escherichia coli 1180] gi|323185154|gb|EFZ70519.1| ATP-dependent Clp protease adaptor protein ClpS family protein [Escherichia coli 1357] gi|323379276|gb|ADX51544.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli KO11] gi|323937988|gb|EGB34250.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli E1520] gi|323942798|gb|EGB38963.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli E482] gi|323947161|gb|EGB43171.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli H120] gi|323953415|gb|EGB49281.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli H252] gi|323958183|gb|EGB53892.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli H263] gi|323962994|gb|EGB58566.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli H489] gi|323967317|gb|EGB62740.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli M863] gi|323969619|gb|EGB64906.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli TA007] gi|323976732|gb|EGB71820.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli TW10509] gi|324009833|gb|EGB79052.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli MS 57-2] gi|324013007|gb|EGB82226.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli MS 60-1] gi|324019029|gb|EGB88248.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli MS 117-3] gi|324116095|gb|EGC10019.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli E1167] gi|326338224|gb|EGD62053.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli O157:H7 str. 1125] gi|326346201|gb|EGD69939.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli O157:H7 str. 1044] gi|327253669|gb|EGE65298.1| ATP-dependent Clp protease adaptor protein ClpS family protein [Escherichia coli STEC_7v] gi|330910663|gb|EGH39173.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli AA86] gi|331038200|gb|EGI10420.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli H736] gi|331044901|gb|EGI17028.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli M605] gi|331050178|gb|EGI22236.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli M718] gi|331055201|gb|EGI27210.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli TA206] gi|331060717|gb|EGI32681.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli TA143] gi|331065611|gb|EGI37504.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli TA271] gi|331075358|gb|EGI46656.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli H591] gi|331080021|gb|EGI51200.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli H299] gi|332091077|gb|EGI96167.1| ATP-dependent Clp protease adaptor protein ClpS family protein [Shigella dysenteriae 155-74] gi|332097186|gb|EGJ02169.1| ATP-dependent Clp protease adaptor protein ClpS family protein [Shigella boydii 3594-74] gi|332104576|gb|EGJ07922.1| regulatory protein for ClpA substrate specificity [Shigella sp. D9] Length = 106 Score = 102 bits (253), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 48/99 (48%), Positives = 68/99 (68%), Gaps = 2/99 (2%) Query: 39 EFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVH 98 +FD + +VR ++ P +Y+V+LVND+YTPMEFVI VLQ FF D E A +ML VH Sbjct: 9 DFDQLAEEKVR--DALKPPSMYKVILVNDDYTPMEFVIDVLQKFFSYDVERATQLMLAVH 66 Query: 99 HQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +QG CGV+ E+AE KV V Y+R++++PL C +E+ Sbjct: 67 YQGKAICGVFTAEVAETKVAMVNKYARENEHPLLCTLEK 105 >gi|237707137|ref|ZP_04537618.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia sp. 3_2_53FAA] gi|226898347|gb|EEH84606.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia sp. 3_2_53FAA] Length = 106 Score = 102 bits (253), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 48/99 (48%), Positives = 68/99 (68%), Gaps = 2/99 (2%) Query: 39 EFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVH 98 +FD + +VR ++ P +Y+V+LVND+YTPMEFVI VLQ FF D E A +ML VH Sbjct: 9 DFDQLAEEKVR--DALKPPSMYKVILVNDDYTPMEFVIDVLQKFFSYDVERATQLMLAVH 66 Query: 99 HQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +QG CGV+ E+AE KV V Y+R++++PL C +E+ Sbjct: 67 YQGKAICGVFTAEVAETKVAMVNKYARENEHPLLCTLEK 105 >gi|56459784|ref|YP_155065.1| ATP-dependent Clp protease adaptor protein ClpS [Idiomarina loihiensis L2TR] gi|67460203|sp|Q5R0C3|CLPS_IDILO RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|56178794|gb|AAV81516.1| Uncharacterized conserved protein [Idiomarina loihiensis L2TR] Length = 102 Score = 101 bits (252), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 48/102 (47%), Positives = 71/102 (69%) Query: 37 IAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLK 96 +++FD+ S+ +++ P +Y+V++ ND+YTPM+FVI VL FF D E A ML+ Sbjct: 1 MSQFDHQHLSDTEEKQELKPPSMYKVIINNDDYTPMDFVIEVLMRFFKMDQERATDTMLQ 60 Query: 97 VHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 VH++G CGVY+ EIAE KV QV Y+R++Q+PL C MEQ+ Sbjct: 61 VHYKGKAVCGVYSAEIAETKVVQVNQYARENQHPLLCTMEQE 102 >gi|109898690|ref|YP_661945.1| ATP-dependent Clp protease adaptor protein ClpS [Pseudoalteromonas atlantica T6c] gi|123064521|sp|Q15T97|CLPS_PSEA6 RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|109700971|gb|ABG40891.1| ATP-dependent Clp protease adaptor protein ClpS [Pseudoalteromonas atlantica T6c] gi|332173682|gb|AEE22936.1| ATP-dependent Clp protease adaptor protein ClpS [Glaciecola agarilytica 4H-3-7+YE-5] Length = 106 Score = 101 bits (252), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 49/85 (57%), Positives = 60/85 (70%) Query: 53 KVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEI 112 K+ P +Y+VLL ND+YTPM+FVI VL FF D E A IML VH++G CGVY EI Sbjct: 21 KLAPPPMYKVLLNNDDYTPMDFVIEVLVRFFNLDSEKAHQIMLTVHYRGRAVCGVYTAEI 80 Query: 113 AEMKVNQVMNYSRQHQYPLQCIMEQ 137 AE KV QV Y+++HQ+PL C MEQ Sbjct: 81 AETKVMQVTQYAKKHQHPLMCTMEQ 105 >gi|37680507|ref|NP_935116.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio vulnificus YJ016] gi|320155836|ref|YP_004188215.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio vulnificus MO6-24/O] gi|326423943|ref|NP_760980.2| ATP-dependent Clp protease adaptor protein ClpS [Vibrio vulnificus CMCP6] gi|39930932|sp|Q7MJ40|CLPS_VIBVY RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|37199255|dbj|BAC95087.1| conserved hypothetical protein [Vibrio vulnificus YJ016] gi|319931148|gb|ADV86012.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio vulnificus MO6-24/O] gi|319999322|gb|AAO10507.2| ATP-dependent Clp protease adaptor protein clpS [Vibrio vulnificus CMCP6] Length = 106 Score = 101 bits (252), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 51/105 (48%), Positives = 71/105 (67%), Gaps = 3/105 (2%) Query: 33 NKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKC 92 N + I + L+ E+ ++++ PK Y V+L ND+YTPM+FVI VL+ FF D + A Sbjct: 4 NFEWITPDSDLLEKEI---TQIQPPKKYNVVLNNDDYTPMDFVIDVLERFFSHDLDKATQ 60 Query: 93 IMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 IMLKVH++G CG Y+ EIAE KV QV YSR++++PL C MEQ Sbjct: 61 IMLKVHYEGKAICGTYSAEIAETKVAQVTMYSRENEHPLLCTMEQ 105 >gi|183598326|ref|ZP_02959819.1| hypothetical protein PROSTU_01717 [Providencia stuartii ATCC 25827] gi|188020501|gb|EDU58541.1| hypothetical protein PROSTU_01717 [Providencia stuartii ATCC 25827] Length = 106 Score = 101 bits (252), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 47/105 (44%), Positives = 70/105 (66%), Gaps = 4/105 (3%) Query: 37 IAEFDNCLDSEVRFSSKV----RVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKC 92 +++F ++V F +V + P +Y+V+L ND+YTPM+FV+ VLQ +F D E A Sbjct: 1 MSDFLGTFKTDVVFKDEVEQVLQPPSMYKVILNNDDYTPMDFVVEVLQKYFSFDEERATQ 60 Query: 93 IMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 IML VH QG G CG++ E+AE K QV +Y+R+H+YPL C +E+ Sbjct: 61 IMLDVHFQGKGVCGIFTAEVAETKAAQVNSYAREHEYPLLCTIEK 105 >gi|163751226|ref|ZP_02158454.1| hypothetical protein KT99_13792 [Shewanella benthica KT99] gi|161328940|gb|EDQ00014.1| hypothetical protein KT99_13792 [Shewanella benthica KT99] Length = 102 Score = 101 bits (252), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 46/91 (50%), Positives = 66/91 (72%) Query: 47 EVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECG 106 E R S++ P +Y+V+L ND+YTPM+FVI +LQ FF K+ + A IML +HHQG G CG Sbjct: 11 EERVESELMPPSMYKVVLNNDDYTPMDFVIEILQLFFKKNEQEATDIMLAIHHQGKGICG 70 Query: 107 VYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 V+ + IAE KV QV ++RQ+++PL C +E+ Sbjct: 71 VFPFGIAETKVAQVNQFARQNEHPLLCSLEK 101 >gi|254468722|ref|ZP_05082128.1| ATP-dependent Clp protease adaptor protein ClpS [beta proteobacterium KB13] gi|207087532|gb|EDZ64815.1| ATP-dependent Clp protease adaptor protein ClpS [beta proteobacterium KB13] Length = 102 Score = 101 bits (252), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 44/101 (43%), Positives = 72/101 (71%) Query: 37 IAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLK 96 +A+ D+ + E + K +PK+++VL++ND++TPMEFV+ V+ F K + A IMLK Sbjct: 1 MAQEDHKIIVEPKKKVKPNLPKMFKVLVLNDDFTPMEFVVDVIMKVFTKTEDEATRIMLK 60 Query: 97 VHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +H +G+ CG+Y YEIAE K+NQV+ +++ Q+PLQ I+E+ Sbjct: 61 IHTEGMAICGIYPYEIAETKMNQVLKLAKEAQHPLQSIIEK 101 >gi|158522493|ref|YP_001530363.1| ATP-dependent Clp protease adaptor protein ClpS [Desulfococcus oleovorans Hxd3] gi|158511319|gb|ABW68286.1| ATP-dependent Clp protease adaptor protein ClpS [Desulfococcus oleovorans Hxd3] Length = 104 Score = 101 bits (251), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 44/90 (48%), Positives = 64/90 (71%) Query: 49 RFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVY 108 + ++V+ P LY+VLL ND+YT MEFV+ +L++ F K E A IML VH G+G CG++ Sbjct: 15 KTGTRVKPPSLYKVLLHNDDYTTMEFVVEILRHIFRKSLEDATTIMLNVHRNGVGCCGLF 74 Query: 109 AYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 YEIAE K++ V Y+R+ +PLQC ME++ Sbjct: 75 TYEIAETKIDLVHGYARERGFPLQCSMERE 104 >gi|157375024|ref|YP_001473624.1| ATP-dependent Clp protease adaptor protein ClpS [Shewanella sediminis HAW-EB3] gi|189082481|sp|A8FUH3|CLPS_SHESH RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|157317398|gb|ABV36496.1| ATP-dependent Clp protease adaptor protein ClpS [Shewanella sediminis HAW-EB3] Length = 102 Score = 101 bits (251), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 47/91 (51%), Positives = 66/91 (72%) Query: 47 EVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECG 106 E R S++ P +Y+V+L ND+YTPM+FVI VLQ FF K+ + A IML +H+QG G CG Sbjct: 11 EERVESELMPPPMYKVILNNDDYTPMDFVIEVLQLFFKKNEQDATDIMLAIHNQGKGICG 70 Query: 107 VYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 V+ + IAE KV QV ++RQ+Q+PL C +E+ Sbjct: 71 VFPFGIAETKVAQVNQFARQNQHPLLCSLEK 101 >gi|86146449|ref|ZP_01064772.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio sp. MED222] gi|218709067|ref|YP_002416688.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio splendidus LGP32] gi|254763826|sp|B7VM32|CLPS_VIBSL RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|85835712|gb|EAQ53847.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio sp. MED222] gi|218322086|emb|CAV18173.1| ATP-dependent Clp protease adaptor protein clpS [Vibrio splendidus LGP32] Length = 106 Score = 101 bits (251), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 46/86 (53%), Positives = 63/86 (73%) Query: 52 SKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYE 111 +KV+ P +Y V+L ND+YTPM+FVI +L+ FF D E A +MLKVH++G CG Y+ E Sbjct: 20 TKVKPPAMYNVVLHNDDYTPMDFVIEILERFFSLDIEKATEVMLKVHYEGKAICGTYSAE 79 Query: 112 IAEMKVNQVMNYSRQHQYPLQCIMEQ 137 IAE KV QV YS+++++PL C MEQ Sbjct: 80 IAETKVAQVTMYSKENEHPLLCTMEQ 105 >gi|329905634|ref|ZP_08274165.1| ATP-dependent Clp protease adaptor protein ClpS [Oxalobacteraceae bacterium IMCC9480] gi|327547556|gb|EGF32362.1| ATP-dependent Clp protease adaptor protein ClpS [Oxalobacteraceae bacterium IMCC9480] Length = 102 Score = 101 bits (251), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 45/90 (50%), Positives = 64/90 (71%) Query: 48 VRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGV 107 VR + K++ P +Y+V L+ND+YTPMEFV+ ++Q +F KD E A IML VH G G CGV Sbjct: 12 VRQTQKLKPPSMYQVYLLNDDYTPMEFVVAIIQEYFNKDRENATQIMLMVHRDGKGMCGV 71 Query: 108 YAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 Y +IA KV V+ ++R+ +PLQC+ME+ Sbjct: 72 YPKDIASTKVELVLTHARKAGHPLQCVMEE 101 >gi|117925058|ref|YP_865675.1| ATP-dependent Clp protease adaptor protein ClpS [Magnetococcus sp. MC-1] gi|117608814|gb|ABK44269.1| ATP-dependent Clp protease adaptor protein ClpS [Magnetococcus sp. MC-1] Length = 113 Score = 101 bits (251), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 50/108 (46%), Positives = 69/108 (63%), Gaps = 4/108 (3%) Query: 33 NKKGIAEFDNCLDSE----VRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHE 88 N G D+ +D + V VR P +YRV+L+ND++TPMEFV+ +L +FF K E Sbjct: 4 NCSGPTMSDHNIDHDTSVAVHLDVVVREPPMYRVVLLNDDFTPMEFVVELLMHFFRKTAE 63 Query: 89 TAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIME 136 A IML +HH+G+G CG Y EIAE KV QV ++R + +PL+C ME Sbjct: 64 QATQIMLNIHHEGVGVCGTYPREIAETKVAQVHQHARTNGHPLKCRME 111 >gi|149909598|ref|ZP_01898251.1| ATP-dependent Clp protease adaptor protein ClpS [Moritella sp. PE36] gi|149807302|gb|EDM67255.1| ATP-dependent Clp protease adaptor protein ClpS [Moritella sp. PE36] Length = 104 Score = 101 bits (251), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 48/101 (47%), Positives = 68/101 (67%), Gaps = 4/101 (3%) Query: 37 IAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLK 96 + +F ++SE+ +++ P Y+V L ND+YTPM+FV+ VLQ FF D + A IML Sbjct: 7 LIDFKTSIESEL----ELKPPSFYKVFLNNDDYTPMDFVVDVLQRFFSMDIDKANQIMLT 62 Query: 97 VHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 VHH+G G CGV+ EIAE KV+QVM Y++ ++ L C MEQ Sbjct: 63 VHHRGRGVCGVFTAEIAETKVSQVMQYAKDNEQSLLCTMEQ 103 >gi|84393767|ref|ZP_00992515.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio splendidus 12B01] gi|84375629|gb|EAP92528.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio splendidus 12B01] Length = 106 Score = 101 bits (251), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 46/86 (53%), Positives = 63/86 (73%) Query: 52 SKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYE 111 +KV+ P +Y V+L ND+YTPM+FVI +L+ FF D E A +MLKVH++G CG Y+ E Sbjct: 20 TKVKPPAMYNVVLNNDDYTPMDFVIEILERFFSLDIEQATEVMLKVHYEGKAICGTYSAE 79 Query: 112 IAEMKVNQVMNYSRQHQYPLQCIMEQ 137 IAE KV QV YS+++++PL C MEQ Sbjct: 80 IAETKVAQVKMYSKENEHPLLCTMEQ 105 >gi|170769198|ref|ZP_02903651.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia albertii TW07627] gi|170121850|gb|EDS90781.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia albertii TW07627] Length = 106 Score = 101 bits (251), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 46/92 (50%), Positives = 64/92 (69%) Query: 46 SEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGEC 105 +E R ++ P +Y+V+LVND+YTPMEFVI VLQ FF D E A +ML VH+QG C Sbjct: 14 AEERVRDALKPPSMYKVILVNDDYTPMEFVIDVLQKFFSYDVERATQLMLAVHYQGKAIC 73 Query: 106 GVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 GV+ E+AE KV V Y+R++++PL C +E+ Sbjct: 74 GVFTAEVAETKVAMVNKYARENEHPLLCTLEK 105 >gi|331672424|ref|ZP_08373214.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli TA280] gi|331070330|gb|EGI41695.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli TA280] Length = 106 Score = 101 bits (251), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 48/99 (48%), Positives = 68/99 (68%), Gaps = 2/99 (2%) Query: 39 EFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVH 98 +FD + +VR ++ P +Y+V+LVND+YTPMEFVI VLQ FF D E A +ML VH Sbjct: 9 DFDQLAEEKVR--DALKPPSMYKVILVNDDYTPMEFVIDVLQKFFSYDVERATQLMLAVH 66 Query: 99 HQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +QG CGV+ E+AE KV V Y+R++++PL C +E+ Sbjct: 67 YQGKAICGVFIAEVAETKVAMVNKYARENEHPLLCTLEK 105 >gi|332039758|gb|EGI76158.1| ATP-dependent Clp protease adaptor protein ClpS [Hylemonella gracilis ATCC 19624] Length = 126 Score = 101 bits (251), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 44/88 (50%), Positives = 65/88 (73%) Query: 49 RFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVY 108 R KV+ P++++V+++ND+YTPMEFV+ V+Q +F KD ETA IMLK+H G G CGVY Sbjct: 36 RRPQKVQPPQMFQVVMLNDDYTPMEFVVVVIQEYFNKDLETATQIMLKIHLDGRGICGVY 95 Query: 109 AYEIAEMKVNQVMNYSRQHQYPLQCIME 136 ++A KV+QV+ +R+ +PLQC+ E Sbjct: 96 TKDVAATKVDQVLEAARKAGHPLQCVAE 123 >gi|294140597|ref|YP_003556575.1| ATP-dependent Clp protease adaptor protein clpS [Shewanella violacea DSS12] gi|293327066|dbj|BAJ01797.1| ATP-dependent Clp protease adaptor protein clpS [Shewanella violacea DSS12] Length = 102 Score = 101 bits (251), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 45/91 (49%), Positives = 66/91 (72%) Query: 47 EVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECG 106 E R S++ P +Y+V+L ND+YTPM+FVI +LQ FF K+ + A IML +HHQG G CG Sbjct: 11 EERVESELMPPSMYKVVLNNDDYTPMDFVIEILQFFFKKNEQEATDIMLAIHHQGKGICG 70 Query: 107 VYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 ++ + IAE KV QV ++RQ+++PL C +E+ Sbjct: 71 IFPFGIAETKVAQVNQFARQNEHPLLCSLEK 101 >gi|30249694|ref|NP_841764.1| hypothetical protein NE1732 [Nitrosomonas europaea ATCC 19718] gi|37076996|sp|Q82TY3|CLPS_NITEU RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|30180731|emb|CAD85643.1| DUF174 [Nitrosomonas europaea ATCC 19718] Length = 103 Score = 101 bits (251), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 42/87 (48%), Positives = 67/87 (77%) Query: 52 SKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYE 111 +++ P LY+V+L+ND++TPM+FV+ VL++FF + E A +MLK+H +G G CG+Y + Sbjct: 17 ARLNPPPLYKVILINDDFTPMDFVVKVLRHFFLMNEEMATKVMLKIHIEGAGICGIYPSD 76 Query: 112 IAEMKVNQVMNYSRQHQYPLQCIMEQK 138 IA KV QV ++SRQ+Q+PL C+ME++ Sbjct: 77 IAVTKVQQVNDFSRQNQHPLMCVMEKE 103 >gi|308049699|ref|YP_003913265.1| ATP-dependent Clp protease adaptor protein ClpS [Ferrimonas balearica DSM 9799] gi|307631889|gb|ADN76191.1| ATP-dependent Clp protease adaptor protein ClpS [Ferrimonas balearica DSM 9799] Length = 104 Score = 101 bits (251), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 48/100 (48%), Positives = 66/100 (66%), Gaps = 1/100 (1%) Query: 38 AEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKV 97 E D+ ++ E + S V P LY+V+L ND+YTPMEFV+ VL FF E A +ML V Sbjct: 5 TELDHVVEHE-KQSQAVEPPPLYKVVLNNDDYTPMEFVVEVLTKFFALTQEQATEVMLTV 63 Query: 98 HHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 H++G G CGV+ Y++AE K QV YSR+H++PL C E+ Sbjct: 64 HYKGKGVCGVFTYDVAETKAAQVNRYSREHEHPLLCSTEK 103 >gi|289208442|ref|YP_003460508.1| ATP-dependent Clp protease adaptor protein ClpS [Thioalkalivibrio sp. K90mix] gi|288944073|gb|ADC71772.1| ATP-dependent Clp protease adaptor protein ClpS [Thioalkalivibrio sp. K90mix] Length = 108 Score = 101 bits (251), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 43/86 (50%), Positives = 63/86 (73%) Query: 52 SKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYE 111 +++ P+ Y+V+L+ND++TPMEFV+ VL+ FF D E A +ML VH +G G CG+Y + Sbjct: 22 PELKPPRQYKVVLLNDDFTPMEFVVEVLETFFSMDREKATQVMLHVHTRGKGICGIYTRD 81 Query: 112 IAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +AE KV QV +Y+R HQ+PL C ME+ Sbjct: 82 VAETKVAQVNDYARSHQHPLLCSMEE 107 >gi|325282898|ref|YP_004255439.1| ATP-dependent Clp protease adapter protein clpS [Deinococcus proteolyticus MRP] gi|324314707|gb|ADY25822.1| ATP-dependent Clp protease adapter protein clpS [Deinococcus proteolyticus MRP] Length = 109 Score = 100 bits (250), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 44/85 (51%), Positives = 61/85 (71%) Query: 52 SKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYE 111 ++ R P+L+RVLL+ND+YTPM+FV+ VL+ +F K + A+ IML VHH+G G GVY + Sbjct: 18 TETRKPRLWRVLLLNDDYTPMDFVVLVLERYFRKTEQDAELIMLAVHHKGQGVAGVYTRD 77 Query: 112 IAEMKVNQVMNYSRQHQYPLQCIME 136 IAE KV QV +RQ YPL+ + E Sbjct: 78 IAETKVAQVTQLARQEGYPLRVLAE 102 >gi|110834145|ref|YP_693004.1| hypothetical protein ABO_1284 [Alcanivorax borkumensis SK2] gi|110647256|emb|CAL16732.1| conserved hypothetical protein [Alcanivorax borkumensis SK2] Length = 124 Score = 100 bits (250), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 42/86 (48%), Positives = 63/86 (73%) Query: 52 SKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYE 111 K++ P +Y+VL++ND+YTPM+FV+ +L++FF D E A +ML VH +G CGVY + Sbjct: 38 PKLKPPSMYKVLMLNDDYTPMDFVVEILEDFFNLDREQATRVMLTVHTEGKAVCGVYPQD 97 Query: 112 IAEMKVNQVMNYSRQHQYPLQCIMEQ 137 IAE K QV+ Y+R++Q+PL C +EQ Sbjct: 98 IAETKATQVVEYARENQHPLMCQVEQ 123 >gi|226355736|ref|YP_002785476.1| ATP-dependent Clp protease adaptor protein clpS [Deinococcus deserti VCD115] gi|226317726|gb|ACO45722.1| putative ATP-dependent Clp protease adaptor protein clpS [Deinococcus deserti VCD115] Length = 105 Score = 100 bits (250), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 44/85 (51%), Positives = 61/85 (71%) Query: 52 SKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYE 111 S + P+LYRVLL+ND+YTPMEFV+ VL+ +F K + A+ IML VHH+G G G+Y + Sbjct: 16 SATQRPRLYRVLLLNDDYTPMEFVVRVLELYFRKTEQEAELIMLAVHHKGQGVAGIYTRD 75 Query: 112 IAEMKVNQVMNYSRQHQYPLQCIME 136 +AE KV QV + +RQ YPL+ + E Sbjct: 76 VAETKVAQVTDRARQEGYPLRLVSE 100 >gi|157962354|ref|YP_001502388.1| ATP-dependent Clp protease adaptor protein ClpS [Shewanella pealeana ATCC 700345] gi|189082480|sp|A8H5L6|CLPS_SHEPA RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|157847354|gb|ABV87853.1| ATP-dependent Clp protease adaptor protein ClpS [Shewanella pealeana ATCC 700345] Length = 102 Score = 100 bits (250), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 44/84 (52%), Positives = 63/84 (75%) Query: 54 VRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIA 113 ++ P +Y+V+L ND+YTPM+FVI +LQ FF KD + A IML +HH+G G CG+Y + IA Sbjct: 18 LKQPSMYKVILNNDDYTPMDFVIEILQLFFKKDEQQATEIMLAIHHKGKGICGIYPFGIA 77 Query: 114 EMKVNQVMNYSRQHQYPLQCIMEQ 137 E KV QV ++RQ+Q+PL C +E+ Sbjct: 78 ETKVAQVNQFARQNQHPLLCSLEE 101 >gi|85059079|ref|YP_454781.1| ATP-dependent Clp protease adaptor protein ClpS [Sodalis glossinidius str. 'morsitans'] gi|123519578|sp|Q2NTZ9|CLPS_SODGM RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|84779599|dbj|BAE74376.1| conserved hypothetical protein [Sodalis glossinidius str. 'morsitans'] Length = 106 Score = 100 bits (250), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 45/92 (48%), Positives = 64/92 (69%) Query: 46 SEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGEC 105 +E + VR P +Y+V+L+ND+YTPMEFVI VLQ FF D E A +ML+VH+QG C Sbjct: 14 AEEQVKDAVRPPSMYKVILINDDYTPMEFVIDVLQKFFSYDVERATQLMLRVHYQGKAVC 73 Query: 106 GVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 G+Y E+AE K V Y+R++++PL C +E+ Sbjct: 74 GIYTAEVAETKAVHVNRYARENEHPLLCTLEK 105 >gi|205352155|ref|YP_002225956.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|238690486|sp|B5R8G5|CLPS_SALG2 RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|205271936|emb|CAR36780.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|326627199|gb|EGE33542.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 106 Score = 100 bits (250), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 47/99 (47%), Positives = 67/99 (67%), Gaps = 2/99 (2%) Query: 39 EFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVH 98 +FD ++ VR ++ P +Y+V+LVND+YTPMEFVI VLQ FF D E A +M VH Sbjct: 9 DFDQLVEDSVR--DALKPPSMYKVILVNDDYTPMEFVIDVLQKFFSYDVERATQLMFAVH 66 Query: 99 HQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +QG CGV+ E+AE KV V Y+R++++PL C +E+ Sbjct: 67 YQGKAICGVFTAEVAETKVAMVNKYARENEHPLLCTLEK 105 >gi|237732131|ref|ZP_04562612.1| ATP-dependent Clp protease adapter protein clpS [Citrobacter sp. 30_2] gi|226907670|gb|EEH93588.1| ATP-dependent Clp protease adapter protein clpS [Citrobacter sp. 30_2] Length = 106 Score = 100 bits (250), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 48/99 (48%), Positives = 68/99 (68%), Gaps = 2/99 (2%) Query: 39 EFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVH 98 +FD L +E + ++ P +Y+V+LVND+YTPMEFVI VLQ FF D E A +ML VH Sbjct: 9 DFD--LLAEDKLRDALKPPSMYKVILVNDDYTPMEFVIDVLQKFFSYDVERATQLMLAVH 66 Query: 99 HQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +QG CGV+ E+AE KV V Y+R++++PL C +E+ Sbjct: 67 YQGKAICGVFTAEVAETKVAMVNKYARENEHPLLCTLEK 105 >gi|42522812|ref|NP_968192.1| hypothetical protein Bd1289 [Bdellovibrio bacteriovorus HD100] gi|67460291|sp|Q6MNG7|CLPS_BDEBA RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|39574008|emb|CAE79185.1| conserved hypothetical protein [Bdellovibrio bacteriovorus HD100] Length = 114 Score = 100 bits (250), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 45/94 (47%), Positives = 68/94 (72%) Query: 45 DSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGE 104 ++ V+ K+ PK+Y+V+L+ND+YTPM+FV+ VL+ FF K E A IML VH +G G Sbjct: 20 EAGVQLVPKLDTPKMYKVILLNDDYTPMDFVVLVLRRFFAKTEEQATEIMLDVHKKGAGV 79 Query: 105 CGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 GV++ EIAEMKV QV +++ +QYPL+ +E++ Sbjct: 80 AGVFSLEIAEMKVMQVNQFAQLNQYPLKSTLEEE 113 >gi|148261822|ref|YP_001235949.1| ATP-dependent Clp protease adaptor protein ClpS [Acidiphilium cryptum JF-5] gi|146403503|gb|ABQ32030.1| ATP-dependent Clp protease adaptor protein ClpS [Acidiphilium cryptum JF-5] Length = 147 Score = 100 bits (250), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 45/105 (42%), Positives = 70/105 (66%), Gaps = 4/105 (3%) Query: 36 GIAEFDNCLDSEVRFSSKVRV----PKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAK 91 G+ +FD + F+++ R P LYRV++ ND+YTPMEFV+ L F K + A Sbjct: 41 GMDDFDGQDGMDPVFATQARARAKRPPLYRVMMFNDDYTPMEFVVATLVGLFGKTTDEAG 100 Query: 92 CIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIME 136 I L++H +G+G CG++ YEIAE K+ QV+ +R++Q+PLQC++E Sbjct: 101 RIALRIHRRGVGVCGIFTYEIAETKMIQVLELARENQHPLQCMIE 145 >gi|319763343|ref|YP_004127280.1| ATP-dependent clp protease adaptor protein clps [Alicycliphilus denitrificans BC] gi|317117904|gb|ADV00393.1| ATP-dependent Clp protease adaptor protein ClpS [Alicycliphilus denitrificans BC] Length = 120 Score = 100 bits (250), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 44/88 (50%), Positives = 63/88 (71%) Query: 49 RFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVY 108 R + K + P++Y+V+++ND+YTPMEFV+ VLQ FF KD E A IMLK+H G G CGVY Sbjct: 30 RRTQKTKPPQMYQVVMLNDDYTPMEFVVVVLQEFFNKDREAATQIMLKIHLDGKGVCGVY 89 Query: 109 AYEIAEMKVNQVMNYSRQHQYPLQCIME 136 ++A KV QV++ + + +PLQC+ E Sbjct: 90 TRDVAATKVEQVLDAAHRAGHPLQCVSE 117 >gi|33301910|sp|Q8DAS0|CLPS_VIBVU RecName: Full=ATP-dependent Clp protease adapter protein ClpS Length = 106 Score = 100 bits (250), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 51/105 (48%), Positives = 70/105 (66%), Gaps = 3/105 (2%) Query: 33 NKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKC 92 N + I + L+ E+ ++++ PK Y V+L ND+YTPM+FVI VL+ FF D A Sbjct: 4 NFEWITPDSDLLEKEI---TQIQPPKKYNVVLNNDDYTPMDFVIDVLERFFSHDLNKATQ 60 Query: 93 IMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 IMLKVH++G CG Y+ EIAE KV QV YSR++++PL C MEQ Sbjct: 61 IMLKVHYEGKAICGTYSAEIAETKVAQVTMYSRENEHPLLCTMEQ 105 >gi|283784648|ref|YP_003364513.1| ATP-dependent Clp protease adaptor protein [Citrobacter rodentium ICC168] gi|282948102|emb|CBG87667.1| ATP-dependent Clp protease adaptor protein [Citrobacter rodentium ICC168] Length = 106 Score = 100 bits (249), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 47/99 (47%), Positives = 67/99 (67%), Gaps = 2/99 (2%) Query: 39 EFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVH 98 +FD +VR ++ P +Y+V+LVND+YTPMEFVI VLQ FF D E A +ML VH Sbjct: 9 DFDQLAADKVR--DALKPPSMYKVILVNDDYTPMEFVIDVLQKFFSYDVERATQLMLAVH 66 Query: 99 HQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +QG CG++ E+AE KV V Y+R++++PL C +E+ Sbjct: 67 YQGKAICGIFTAEVAETKVAMVNKYARENEHPLLCTLEK 105 >gi|281178016|dbj|BAI54346.1| conserved hypothetical protein [Escherichia coli SE15] Length = 106 Score = 100 bits (249), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 47/99 (47%), Positives = 68/99 (68%), Gaps = 2/99 (2%) Query: 39 EFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVH 98 +FD + +VR ++ P +Y+V+LVND+YTPM+FVI VLQ FF D E A +ML VH Sbjct: 9 DFDQLAEEKVR--DALKPPSMYKVILVNDDYTPMDFVIDVLQKFFSYDVERATQLMLAVH 66 Query: 99 HQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +QG CGV+ E+AE KV V Y+R++++PL C +E+ Sbjct: 67 YQGKAICGVFTAEVAETKVAMVNKYARENEHPLLCTLEK 105 >gi|330825577|ref|YP_004388880.1| ATP-dependent Clp protease adapter protein clpS [Alicycliphilus denitrificans K601] gi|329310949|gb|AEB85364.1| ATP-dependent Clp protease adapter protein clpS [Alicycliphilus denitrificans K601] Length = 120 Score = 100 bits (249), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 44/88 (50%), Positives = 63/88 (71%) Query: 49 RFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVY 108 R + K + P++Y+V+++ND+YTPMEFV+ VLQ FF KD E A IMLK+H G G CGVY Sbjct: 30 RRTQKTKPPQMYQVVMLNDDYTPMEFVVVVLQEFFNKDREAATQIMLKIHLDGKGVCGVY 89 Query: 109 AYEIAEMKVNQVMNYSRQHQYPLQCIME 136 ++A KV QV++ + + +PLQC+ E Sbjct: 90 TRDVAATKVEQVLDAAHRAGHPLQCVSE 117 >gi|307822307|ref|ZP_07652539.1| ATP-dependent Clp protease adaptor protein ClpS [Methylobacter tundripaludum SV96] gi|307736873|gb|EFO07718.1| ATP-dependent Clp protease adaptor protein ClpS [Methylobacter tundripaludum SV96] Length = 107 Score = 100 bits (249), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 43/86 (50%), Positives = 64/86 (74%) Query: 52 SKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYE 111 K++ P LY+V+L+ND++TPM+FVI +L +FF E A +ML+VH QG+G CG+Y+ + Sbjct: 21 PKLKRPPLYKVILLNDDFTPMDFVIEILMDFFAMSEEKATQVMLQVHTQGVGVCGMYSKD 80 Query: 112 IAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +AE KV V +YSR+H +PL C ME+ Sbjct: 81 VAETKVYIVNDYSREHHHPLMCSMEE 106 >gi|332088859|gb|EGI93971.1| ATP-dependent Clp protease adaptor protein ClpS family protein [Shigella boydii 5216-82] Length = 106 Score = 100 bits (249), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 47/99 (47%), Positives = 68/99 (68%), Gaps = 2/99 (2%) Query: 39 EFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVH 98 +FD + +VR ++ P +Y+V+LVND+YTPMEFVI VLQ FF D E A +ML VH Sbjct: 9 DFDQLAEEKVR--DALKPPSMYKVILVNDDYTPMEFVIDVLQKFFSYDVERATQLMLAVH 66 Query: 99 HQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +QG CGV+ E+AE K+ V Y+R++++PL C +E+ Sbjct: 67 YQGKAICGVFTAEVAETKMAMVNKYARENEHPLLCTLEK 105 >gi|283832492|ref|ZP_06352233.1| ATP-dependent Clp protease adaptor protein ClpS [Citrobacter youngae ATCC 29220] gi|291072152|gb|EFE10261.1| ATP-dependent Clp protease adaptor protein ClpS [Citrobacter youngae ATCC 29220] Length = 106 Score = 100 bits (249), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 47/99 (47%), Positives = 68/99 (68%), Gaps = 2/99 (2%) Query: 39 EFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVH 98 +FD L +E + ++ P +Y+V+L+ND+YTPMEFVI VLQ FF D E A +ML VH Sbjct: 9 DFD--LLAEDKLRDALKPPSMYKVILINDDYTPMEFVIDVLQKFFSYDVERATQLMLAVH 66 Query: 99 HQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +QG CGV+ E+AE KV V Y+R++++PL C +E+ Sbjct: 67 YQGKAICGVFTAEVAETKVAMVNKYARENEHPLLCTLEK 105 >gi|86139108|ref|ZP_01057679.1| ATP-dependent Clp protease, adaptor protein ClpS [Roseobacter sp. MED193] gi|85824339|gb|EAQ44543.1| ATP-dependent Clp protease, adaptor protein ClpS [Roseobacter sp. MED193] Length = 114 Score = 100 bits (249), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 45/87 (51%), Positives = 63/87 (72%) Query: 52 SKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYE 111 K + P Y+VLL+ND+YTPMEFV+ VL+ FF H + IML VH +G+ GV+ +E Sbjct: 27 PKTQRPPRYKVLLLNDDYTPMEFVVMVLERFFGMTHAQSFEIMLTVHKKGVAVVGVFTHE 86 Query: 112 IAEMKVNQVMNYSRQHQYPLQCIMEQK 138 IAE KV QVM+++ +HQ+PLQC ME++ Sbjct: 87 IAETKVAQVMDFANRHQHPLQCTMEKE 113 >gi|94499670|ref|ZP_01306207.1| ATP-dependent Clp protease adaptor protein ClpS [Oceanobacter sp. RED65] gi|94428424|gb|EAT13397.1| ATP-dependent Clp protease adaptor protein ClpS [Oceanobacter sp. RED65] Length = 116 Score = 100 bits (248), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 45/85 (52%), Positives = 61/85 (71%) Query: 53 KVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEI 112 +++ P LY+V+++ND+YTPM+FVI VL FF D E A IML VH QG CGVY +I Sbjct: 29 ELKRPSLYQVIMLNDDYTPMDFVIDVLTRFFAMDMEKATQIMLAVHTQGSAVCGVYTKDI 88 Query: 113 AEMKVNQVMNYSRQHQYPLQCIMEQ 137 AE K QVM Y+ +HQ+PL+C ++Q Sbjct: 89 AETKAAQVMAYAEEHQHPLKCNIQQ 113 >gi|285018228|ref|YP_003375939.1| ATP-dependent clp protease adaptor protein clps [Xanthomonas albilineans GPE PC73] gi|283473446|emb|CBA15951.1| putative atp-dependent clp protease adaptor protein clps [Xanthomonas albilineans] Length = 94 Score = 100 bits (248), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 47/81 (58%), Positives = 59/81 (72%) Query: 57 PKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMK 116 P +Y+VLL+ND+YTPMEFV+ VLQ FF D E A +ML VH +G G CGVY E+AE K Sbjct: 13 PPMYQVLLLNDDYTPMEFVVTVLQQFFALDLERATQVMLHVHTRGRGVCGVYTREVAESK 72 Query: 117 VNQVMNYSRQHQYPLQCIMEQ 137 V QV +SR +Q+PL C ME+ Sbjct: 73 VAQVNEFSRMNQHPLLCTMEK 93 >gi|215486012|ref|YP_002328443.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli O127:H6 str. E2348/69] gi|254763815|sp|B7UMX3|CLPS_ECO27 RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|215264084|emb|CAS08426.1| regulatory protein for ClpA substrate specificity [Escherichia coli O127:H6 str. E2348/69] Length = 106 Score = 100 bits (248), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 47/99 (47%), Positives = 68/99 (68%), Gaps = 2/99 (2%) Query: 39 EFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVH 98 +F+ + +VR ++ P +Y+V+LVND+YTPMEFVI VLQ FF D E A +ML VH Sbjct: 9 DFEQLAEEKVR--DALKPPSMYKVILVNDDYTPMEFVIDVLQKFFSYDVERATQLMLAVH 66 Query: 99 HQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +QG CGV+ E+AE KV V Y+R++++PL C +E+ Sbjct: 67 YQGKAICGVFTAEVAETKVAMVNKYARENEHPLLCTLEK 105 >gi|229525754|ref|ZP_04415159.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio cholerae bv. albensis VL426] gi|229339335|gb|EEO04352.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio cholerae bv. albensis VL426] Length = 106 Score = 100 bits (248), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 44/86 (51%), Positives = 61/86 (70%) Query: 52 SKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYE 111 + V+ P +Y V+L ND+YTPM+FVI +L+ FF D E A +MLKVH++G CG + E Sbjct: 20 TAVKPPSMYHVVLNNDDYTPMDFVIEILERFFSMDIERATQVMLKVHYEGKAICGTFTAE 79 Query: 112 IAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +AE KV QV YSR++++PL C MEQ Sbjct: 80 VAETKVAQVTRYSRENEHPLLCTMEQ 105 >gi|222111090|ref|YP_002553354.1| ATP-dependent clp protease adaptor protein clps [Acidovorax ebreus TPSY] gi|221730534|gb|ACM33354.1| ATP-dependent Clp protease adaptor protein ClpS [Acidovorax ebreus TPSY] Length = 122 Score = 100 bits (248), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 44/88 (50%), Positives = 63/88 (71%) Query: 49 RFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVY 108 R + K + P++Y+V+++ND+YTPMEFV+ VLQ FF KD E A IMLK+H G G CGVY Sbjct: 32 RRTQKTQPPQMYQVVMLNDDYTPMEFVVVVLQEFFNKDREAATQIMLKIHLDGKGVCGVY 91 Query: 109 AYEIAEMKVNQVMNYSRQHQYPLQCIME 136 ++A KV+QV+ + + +PLQC+ E Sbjct: 92 TRDVAATKVDQVLEAAHKAGHPLQCLSE 119 >gi|59712373|ref|YP_205149.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio fischeri ES114] gi|197335290|ref|YP_002156588.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio fischeri MJ11] gi|67460142|sp|Q5E3Y5|CLPS_VIBF1 RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|238690298|sp|B5FG65|CLPS_VIBFM RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|59480474|gb|AAW86261.1| specificity factor for ClpA-ClpP chaperone-protease complex [Vibrio fischeri ES114] gi|197316780|gb|ACH66227.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio fischeri MJ11] Length = 106 Score = 100 bits (248), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 47/95 (49%), Positives = 65/95 (68%), Gaps = 2/95 (2%) Query: 45 DSEV--RFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGI 102 DS+V + +++R P +Y+V+L ND+YTPMEFV+ VL FF D E A +ML VH++G Sbjct: 11 DSDVLEQEKTELRPPSMYKVVLNNDDYTPMEFVVEVLDKFFSMDLEKATQLMLTVHYEGK 70 Query: 103 GECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 CG + E+AE KV QV YSR +++PL C MEQ Sbjct: 71 AVCGTFTAEVAETKVAQVNTYSRDNEHPLLCTMEQ 105 >gi|268590195|ref|ZP_06124416.1| ATP-dependent Clp protease adaptor protein ClpS [Providencia rettgeri DSM 1131] gi|291314476|gb|EFE54929.1| ATP-dependent Clp protease adaptor protein ClpS [Providencia rettgeri DSM 1131] Length = 106 Score = 100 bits (248), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 46/105 (43%), Positives = 69/105 (65%), Gaps = 4/105 (3%) Query: 37 IAEFDNCLDSEVRFSSKV----RVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKC 92 +++F ++V F ++ + P +Y+VLL ND+YTPM+FV+ VLQ +F D E A Sbjct: 1 MSDFLGTFKTDVIFKDEIEQTLQPPSMYKVLLNNDDYTPMDFVVEVLQKYFSFDEERATQ 60 Query: 93 IMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 IML VH QG G CG++ E+AE K QV ++R+H+YPL C +E+ Sbjct: 61 IMLDVHIQGKGVCGIFTAEVAETKAAQVNTFAREHEYPLLCTIEK 105 >gi|237752679|ref|ZP_04583159.1| ATP-dependent Clp protease adapter protein clpS [Helicobacter winghamensis ATCC BAA-430] gi|229376168|gb|EEO26259.1| ATP-dependent Clp protease adapter protein clpS [Helicobacter winghamensis ATCC BAA-430] Length = 101 Score = 100 bits (248), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 47/100 (47%), Positives = 69/100 (69%), Gaps = 4/100 (4%) Query: 38 AEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKV 97 A+FD ++ K++ P YRV+L+ND+YT EFVI VLQ F+KD E + +ML++ Sbjct: 5 AQFDQITET----LEKIQEPIRYRVILLNDDYTTQEFVIEVLQAIFHKDFEESLNLMLQI 60 Query: 98 HHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 HH G G CG+Y Y+IAE+KV QV +++ QYPL+ I+E+ Sbjct: 61 HHNGKGVCGIYPYDIAEIKVAQVRKMAKEKQYPLRAILEK 100 >gi|218885563|ref|YP_002434884.1| ATP-dependent Clp protease adaptor protein ClpS [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|226706562|sp|B8DJU4|CLPS_DESVM RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|218756517|gb|ACL07416.1| ATP-dependent Clp protease adaptor protein ClpS [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 100 Score = 100 bits (248), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 45/97 (46%), Positives = 64/97 (65%) Query: 41 DNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQ 100 D D+E+ +VR P+++RVLL ND+YT MEFV+ +L F + + A IML VH + Sbjct: 3 DGGRDTELLIEDEVREPRMFRVLLHNDDYTTMEFVVSILIEVFRRTPDEATRIMLAVHEK 62 Query: 101 GIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 G+GECGVY E+AE KV V +R+ YPL+C +E+ Sbjct: 63 GVGECGVYTAEVAETKVALVHARARREGYPLRCTLEE 99 >gi|90408367|ref|ZP_01216530.1| ATP-dependent Clp protease adaptor protein ClpS [Psychromonas sp. CNPT3] gi|90310530|gb|EAS38652.1| ATP-dependent Clp protease adaptor protein ClpS [Psychromonas sp. CNPT3] Length = 108 Score = 100 bits (248), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 45/89 (50%), Positives = 65/89 (73%) Query: 49 RFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVY 108 + +K++ P +Y VLL ND+YTPM+FVI VLQ FF + A IML VH+ IG CG + Sbjct: 18 KLETKLQPPAMYNVLLHNDDYTPMDFVIDVLQRFFQLSTDKATQIMLDVHYHDIGICGTF 77 Query: 109 AYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 + EIAE KV QVMNY++++++PL+C M++ Sbjct: 78 SAEIAETKVMQVMNYAQENEHPLRCSMQK 106 >gi|251789967|ref|YP_003004688.1| ATP-dependent Clp protease adaptor protein ClpS [Dickeya zeae Ech1591] gi|247538588|gb|ACT07209.1| ATP-dependent Clp protease adaptor protein ClpS [Dickeya zeae Ech1591] Length = 106 Score = 100 bits (248), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 45/88 (51%), Positives = 64/88 (72%) Query: 50 FSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYA 109 ++ ++ P +Y+V+L ND+YTPMEFVI VLQ FF D E A +ML VH+QG CGVY+ Sbjct: 18 YTEALQPPSMYKVILNNDDYTPMEFVIDVLQKFFSYDIERATQLMLTVHYQGKAICGVYS 77 Query: 110 YEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 E+AE KV QV Y+R++++PL C +E+ Sbjct: 78 AEVAETKVEQVNRYARENEHPLLCTLEK 105 >gi|91793189|ref|YP_562840.1| ATP-dependent Clp protease adaptor protein ClpS [Shewanella denitrificans OS217] gi|122968755|sp|Q12N59|CLPS_SHEDO RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|91715191|gb|ABE55117.1| ATP-dependent Clp protease adaptor protein ClpS [Shewanella denitrificans OS217] Length = 102 Score = 99.8 bits (247), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 50/106 (47%), Positives = 68/106 (64%), Gaps = 5/106 (4%) Query: 32 MNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAK 91 M K G E ++ R S++ P +Y+V+L ND+YTPM+FVI VL FF K A Sbjct: 1 MGKTGSVEH-----TKQRIESELMPPSMYKVILNNDDYTPMDFVIEVLARFFDKHEPQAT 55 Query: 92 CIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 IML +HHQG G CGVY + IAE KV QV ++R++Q+PL C +E+ Sbjct: 56 DIMLTIHHQGKGICGVYPFGIAETKVLQVNQFARENQHPLLCTLEK 101 >gi|260222810|emb|CBA32750.1| ATP-dependent Clp protease adapter protein clpS [Curvibacter putative symbiont of Hydra magnipapillata] Length = 108 Score = 99.8 bits (247), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 44/88 (50%), Positives = 63/88 (71%) Query: 49 RFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVY 108 R S +V+ P +Y+V+++ND+YTPMEFV+ V+Q FF KD E A IMLK+H G G CGVY Sbjct: 17 RLSQRVQPPSMYQVVMLNDDYTPMEFVVVVIQEFFGKDLEAATQIMLKIHLDGRGVCGVY 76 Query: 109 AYEIAEMKVNQVMNYSRQHQYPLQCIME 136 +IA KV+QV+ + + +PL+C+ E Sbjct: 77 PKDIAATKVDQVLEAAHKAGHPLKCVSE 104 >gi|254417766|ref|ZP_05031490.1| ATP-dependent Clp protease adaptor protein ClpS [Brevundimonas sp. BAL3] gi|196183943|gb|EDX78919.1| ATP-dependent Clp protease adaptor protein ClpS [Brevundimonas sp. BAL3] Length = 77 Score = 99.8 bits (247), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 43/75 (57%), Positives = 58/75 (77%) Query: 63 LLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMN 122 L++ND+Y+PMEFV++VL+ FF K E A IML VH G+G CGV+ YE+AE KV QV+ Sbjct: 2 LILNDDYSPMEFVVYVLERFFQKSREEATRIMLHVHQHGVGVCGVFTYEVAETKVAQVIE 61 Query: 123 YSRQHQYPLQCIMEQ 137 +R+HQ+PLQC ME+ Sbjct: 62 TARRHQHPLQCTMEK 76 >gi|323496571|ref|ZP_08101624.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio sinaloensis DSM 21326] gi|323318317|gb|EGA71275.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio sinaloensis DSM 21326] Length = 106 Score = 99.8 bits (247), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 42/86 (48%), Positives = 62/86 (72%) Query: 52 SKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYE 111 +K++ P +Y V+L ND+YTPM+FVI +L+ FF D + A +MLKVH++G CG + E Sbjct: 20 TKIKPPSMYNVVLNNDDYTPMDFVIEILERFFSMDEDKATQVMLKVHYEGKAICGTFTAE 79 Query: 112 IAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +AE KV QV YS+++++PL C MEQ Sbjct: 80 VAETKVAQVTMYSKENEHPLLCTMEQ 105 >gi|121594198|ref|YP_986094.1| ATP-dependent Clp protease adaptor protein ClpS [Acidovorax sp. JS42] gi|120606278|gb|ABM42018.1| ATP-dependent Clp protease adaptor protein ClpS [Acidovorax sp. JS42] Length = 135 Score = 99.8 bits (247), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 44/88 (50%), Positives = 63/88 (71%) Query: 49 RFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVY 108 R + K + P++Y+V+++ND+YTPMEFV+ VLQ FF KD E A IMLK+H G G CGVY Sbjct: 45 RRTQKTQPPQMYQVVMLNDDYTPMEFVVVVLQEFFNKDREAATQIMLKIHLDGKGVCGVY 104 Query: 109 AYEIAEMKVNQVMNYSRQHQYPLQCIME 136 ++A KV+QV+ + + +PLQC+ E Sbjct: 105 TRDVAATKVDQVLEAAHKAGHPLQCLSE 132 >gi|330427907|gb|AEC19241.1| ATP-dependent Clp protease adaptor protein ClpS [Pusillimonas sp. T7-7] Length = 107 Score = 99.8 bits (247), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 45/88 (51%), Positives = 61/88 (69%) Query: 49 RFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVY 108 R +K+ P +Y+V+L+ND+YTPMEFV+ VLQ F K+ + A IMLKVHH+G G CGVY Sbjct: 15 RQPAKLAPPPMYQVVLLNDDYTPMEFVVAVLQRIFGKNEDEAARIMLKVHHEGRGVCGVY 74 Query: 109 AYEIAEMKVNQVMNYSRQHQYPLQCIME 136 +IA +V V + Q+PLQC+ME Sbjct: 75 PRDIAATRVEMVRQMAHARQHPLQCVME 102 >gi|156934623|ref|YP_001438539.1| ATP-dependent Clp protease adaptor protein ClpS [Cronobacter sakazakii ATCC BAA-894] gi|260597283|ref|YP_003209854.1| ATP-dependent Clp protease adaptor protein ClpS [Cronobacter turicensis z3032] gi|166214735|sp|A7MEQ8|CLPS_ENTS8 RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|156532877|gb|ABU77703.1| hypothetical protein ESA_02457 [Cronobacter sakazakii ATCC BAA-894] gi|260216460|emb|CBA29592.1| ATP-dependent Clp protease adapter protein clpS [Cronobacter turicensis z3032] Length = 106 Score = 99.8 bits (247), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 47/103 (45%), Positives = 69/103 (66%), Gaps = 2/103 (1%) Query: 35 KGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIM 94 K +FD+ + ++R ++ P +Y+V+L+ND+YTPMEFVI VLQ FF D E A +M Sbjct: 5 KSWLDFDHLAEDDLR--EALKPPSMYKVILMNDDYTPMEFVIDVLQKFFSYDVERATQLM 62 Query: 95 LKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 L VH+QG CGV+ E+AE KV V Y+R++ +PL C +E+ Sbjct: 63 LTVHYQGKAICGVFTAEVAETKVALVNKYARENDHPLLCTLEK 105 >gi|289805673|ref|ZP_06536302.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 107 Score = 99.8 bits (247), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 47/95 (49%), Positives = 65/95 (68%), Gaps = 2/95 (2%) Query: 39 EFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVH 98 +FD ++ VR ++ P +Y+V+LVND+YTPMEFVI VLQ FF D E A +ML VH Sbjct: 9 DFDQLVEDSVR--DALKPPSMYKVILVNDDYTPMEFVIDVLQKFFSYDVERATQLMLAVH 66 Query: 99 HQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQC 133 +QG CGV+ E+AE KV V Y+R++++PL C Sbjct: 67 YQGKAICGVFTAEVAETKVAMVNKYARENEHPLLC 101 >gi|291616886|ref|YP_003519628.1| ClpS [Pantoea ananatis LMG 20103] gi|291151916|gb|ADD76500.1| ClpS [Pantoea ananatis LMG 20103] gi|327393314|dbj|BAK10736.1| ATP-dependent Clp protease adaptor protein ClpS [Pantoea ananatis AJ13355] Length = 106 Score = 99.8 bits (247), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 49/105 (46%), Positives = 66/105 (62%), Gaps = 2/105 (1%) Query: 33 NKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKC 92 N F+ D +VR ++ P +Y+V+L ND+YTPMEFVI VLQ FF D E A Sbjct: 3 NTNDWLNFEQLADDKVR--EGLKPPSMYKVILNNDDYTPMEFVIDVLQKFFSYDIERATQ 60 Query: 93 IMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +MLKVH+ G CGV+ E+AE K QV NY+R + +PL C +E+ Sbjct: 61 LMLKVHYHGKAICGVFTAEVAETKAAQVNNYARDNHHPLLCTLEK 105 >gi|271500837|ref|YP_003333862.1| ATP-dependent Clp protease adaptor protein ClpS [Dickeya dadantii Ech586] gi|270344392|gb|ACZ77157.1| ATP-dependent Clp protease adaptor protein ClpS [Dickeya dadantii Ech586] Length = 106 Score = 99.8 bits (247), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 45/88 (51%), Positives = 64/88 (72%) Query: 50 FSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYA 109 ++ ++ P +Y+V+L ND+YTPMEFVI VLQ FF D E A +ML VH+QG CGVY+ Sbjct: 18 YTEALQPPSMYKVILNNDDYTPMEFVIDVLQKFFSYDIERATQLMLTVHYQGKAICGVYS 77 Query: 110 YEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 E+AE KV QV Y+R++++PL C +E+ Sbjct: 78 AEVAETKVAQVNRYARENEHPLLCTLEK 105 >gi|254506183|ref|ZP_05118327.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio parahaemolyticus 16] gi|219551001|gb|EED27982.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio parahaemolyticus 16] Length = 106 Score = 99.8 bits (247), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 43/86 (50%), Positives = 62/86 (72%) Query: 52 SKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYE 111 +KV+ P +Y V+L ND+YTPM+FVI +L+ FF D + A +ML+VH++G CG Y E Sbjct: 20 TKVKPPSMYNVVLNNDDYTPMDFVIEILERFFSMDADKATQVMLQVHYEGKAICGTYTAE 79 Query: 112 IAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +AE KV QV YS+++++PL C MEQ Sbjct: 80 VAETKVAQVTMYSKENEHPLLCTMEQ 105 >gi|21231414|ref|NP_637331.1| ATP-dependent Clp protease adaptor protein ClpS [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66768532|ref|YP_243294.1| ATP-dependent Clp protease adaptor protein ClpS [Xanthomonas campestris pv. campestris str. 8004] gi|24638420|sp|Q8P999|CLPS_XANCP RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|81305496|sp|Q4UUJ9|CLPS_XANC8 RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|21113082|gb|AAM41255.1| conserved hypothetical protein [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66573864|gb|AAY49274.1| conserved hypothetical protein [Xanthomonas campestris pv. campestris str. 8004] Length = 106 Score = 99.8 bits (247), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 53/106 (50%), Positives = 69/106 (65%), Gaps = 1/106 (0%) Query: 32 MNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAK 91 M +K E D+ L E +V P Y+VLL+ND+YTPM+FV+ VLQ FF + E A Sbjct: 1 MPRKTSHEHDHGLVVETS-KPEVAPPPRYQVLLLNDDYTPMDFVVTVLQQFFNLELERAT 59 Query: 92 CIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +ML VH +G G CGVY+ E+AE KV QV +SR +Q+PL C MEQ Sbjct: 60 QVMLHVHTRGRGVCGVYSREVAESKVAQVNEFSRMNQHPLLCTMEQ 105 >gi|256822682|ref|YP_003146645.1| ATP-dependent Clp protease adaptor protein ClpS [Kangiella koreensis DSM 16069] gi|256796221|gb|ACV26877.1| ATP-dependent Clp protease adaptor protein ClpS [Kangiella koreensis DSM 16069] Length = 115 Score = 99.4 bits (246), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 43/87 (49%), Positives = 64/87 (73%) Query: 52 SKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYE 111 K++ P +Y+VL++ND+YTPM+FV+ VL+ FF D E A +ML+VHH+G G CG + + Sbjct: 26 PKLKQPPMYKVLILNDDYTPMDFVVDVLRKFFTMDTEQATRVMLQVHHEGQGVCGTFTPD 85 Query: 112 IAEMKVNQVMNYSRQHQYPLQCIMEQK 138 IAE KV QV ++R +Q+PL C+ME + Sbjct: 86 IAETKVVQVNEFARANQHPLLCVMEPE 112 >gi|304311206|ref|YP_003810804.1| ATP-dependent Clp protease adaptor protein [gamma proteobacterium HdN1] gi|301796939|emb|CBL45152.1| ATP-dependent Clp protease adaptor protein [gamma proteobacterium HdN1] Length = 120 Score = 99.4 bits (246), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 47/106 (44%), Positives = 71/106 (66%), Gaps = 3/106 (2%) Query: 33 NKKGIAEFDNCLDSEVR-FSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAK 91 N+ + E + D VR S++V P +++VL++ND+YTPMEFV+ VLQ FF + E A Sbjct: 16 NRPSVTEAEG--DLAVREASAEVAPPPMFQVLMLNDDYTPMEFVVEVLQRFFGMNREAAT 73 Query: 92 CIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +ML VH +G CGV+ ++AE K QVM Y+R++Q+PL C +E+ Sbjct: 74 QVMLIVHTKGQASCGVFTKDVAETKAMQVMKYARENQHPLMCRIER 119 >gi|261339214|ref|ZP_05967072.1| hypothetical protein ENTCAN_05442 [Enterobacter cancerogenus ATCC 35316] gi|296103112|ref|YP_003613258.1| ATP-dependent Clp protease adaptor protein ClpS [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|288319063|gb|EFC58001.1| ATP-dependent Clp protease adaptor protein ClpS [Enterobacter cancerogenus ATCC 35316] gi|295057571|gb|ADF62309.1| ATP-dependent Clp protease adaptor protein ClpS [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295096412|emb|CBK85502.1| Uncharacterized conserved protein [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 106 Score = 99.4 bits (246), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 45/99 (45%), Positives = 69/99 (69%), Gaps = 2/99 (2%) Query: 39 EFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVH 98 +FD + +VR ++ P +Y+V+L+ND+YTPMEFVI VLQ FF D E A +ML VH Sbjct: 9 DFDQLAEDKVR--DALKPPSMYKVMLMNDDYTPMEFVIDVLQKFFSYDVERATQLMLTVH 66 Query: 99 HQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 ++G CG++ E+AE KV V +Y+R++++PL C +E+ Sbjct: 67 YRGKAICGIFTAEVAETKVAMVNDYARENEHPLLCTLEK 105 >gi|300716062|ref|YP_003740865.1| ATP-dependent Clp protease adaptor protein [Erwinia billingiae Eb661] gi|299061898|emb|CAX59014.1| ATP-dependent Clp protease adaptor protein [Erwinia billingiae Eb661] Length = 106 Score = 99.4 bits (246), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 48/105 (45%), Positives = 68/105 (64%), Gaps = 2/105 (1%) Query: 33 NKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKC 92 N F++ D ++R ++ P +Y+V+L ND+YTPMEFVI VLQ FF D E A Sbjct: 3 NTNDWLNFEHLADDKLR--EGLKPPSMYKVILNNDDYTPMEFVIDVLQKFFSYDTERATQ 60 Query: 93 IMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +ML VH+QG CGVY E+AE KV V Y+R++++PL C +E+ Sbjct: 61 LMLAVHYQGKAICGVYTAEVAETKVAHVNKYARENEHPLLCTLEK 105 >gi|90413212|ref|ZP_01221207.1| ATP-dependent Clp protease adaptor protein ClpS [Photobacterium profundum 3TCK] gi|90325764|gb|EAS42222.1| ATP-dependent Clp protease adaptor protein ClpS [Photobacterium profundum 3TCK] Length = 106 Score = 99.4 bits (246), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 50/108 (46%), Positives = 73/108 (67%), Gaps = 4/108 (3%) Query: 30 SRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHET 89 S++ + I E D LD E ++V+ P +Y+V+L ND+YTPM+FVI VLQ FF D E Sbjct: 2 SKLYEWIIPESD-VLDKE---EAQVKPPAMYKVVLNNDDYTPMDFVIEVLQKFFSMDMEK 57 Query: 90 AKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 A +ML VH++G CG + E+AE KV QVM ++R++++PL C ME+ Sbjct: 58 ATQLMLNVHYEGKAICGTFTAEVAETKVAQVMMHARENEHPLLCTMEK 105 >gi|145299397|ref|YP_001142238.1| ATP-dependent Clp protease adaptor protein ClpS [Aeromonas salmonicida subsp. salmonicida A449] gi|158514051|sp|A4SNL8|CLPS_AERS4 RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|142852169|gb|ABO90490.1| ATP-dependent Clp protease adaptor protein ClpS [Aeromonas salmonicida subsp. salmonicida A449] Length = 105 Score = 99.4 bits (246), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 45/86 (52%), Positives = 61/86 (70%) Query: 52 SKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYE 111 +K++ P +Y+V+L ND+YTPMEFV+ VLQ FF D + A +ML VH+ G G CG + E Sbjct: 19 TKLQPPPMYKVVLNNDDYTPMEFVVEVLQKFFGMDLDKATQVMLSVHYSGKGVCGTFTAE 78 Query: 112 IAEMKVNQVMNYSRQHQYPLQCIMEQ 137 IAE KV QV YSR +++PL C ME+ Sbjct: 79 IAETKVVQVNTYSRNNEHPLLCTMEK 104 >gi|200390037|ref|ZP_03216648.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|199602482|gb|EDZ01028.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Virchow str. SL491] Length = 106 Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 47/99 (47%), Positives = 67/99 (67%), Gaps = 2/99 (2%) Query: 39 EFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVH 98 +FD ++ V ++ P +Y+V+LVND+YTPMEFVI VLQ FF D E A +ML VH Sbjct: 9 DFDQLVEDSV--CDALKPPSMYKVILVNDDYTPMEFVIDVLQKFFSYDVERATQLMLAVH 66 Query: 99 HQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +QG CGV+ E+AE KV V Y+R++++PL C +E+ Sbjct: 67 YQGKAICGVFTAEVAETKVAMVNKYARENEHPLLCTLEK 105 >gi|258621690|ref|ZP_05716721.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio mimicus VM573] gi|258626363|ref|ZP_05721210.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio mimicus VM603] gi|262165415|ref|ZP_06033152.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio mimicus VM223] gi|262171823|ref|ZP_06039501.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio mimicus MB-451] gi|258581415|gb|EEW06317.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio mimicus VM603] gi|258585921|gb|EEW10639.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio mimicus VM573] gi|261892899|gb|EEY38885.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio mimicus MB-451] gi|262025131|gb|EEY43799.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio mimicus VM223] Length = 106 Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 44/86 (51%), Positives = 61/86 (70%) Query: 52 SKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYE 111 + V+ P +Y V+L ND+YTPM+FVI +L+ FF D E A +MLKVH++G CG + E Sbjct: 20 TAVKPPSMYHVVLNNDDYTPMDFVIEILERFFSMDIERATQVMLKVHYEGKAICGTFTAE 79 Query: 112 IAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +AE KV QV YSR++++PL C MEQ Sbjct: 80 VAETKVAQVTMYSRENEHPLLCTMEQ 105 >gi|27065491|pdb|1LZW|A Chain A, Structural Basis Of Clps-Mediated Switch In Clpa Substrate Recognition gi|27065646|pdb|1MG9|A Chain A, The Structural Basis Of Clps-Mediated Switch In Clpa Substrate Recognition Length = 106 Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 47/99 (47%), Positives = 67/99 (67%), Gaps = 2/99 (2%) Query: 39 EFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVH 98 +FD + +VR ++ P +Y+V+LVND+YTPMEFVI VLQ FF D E A +ML V Sbjct: 9 DFDQLAEEKVR--DALKPPSMYKVILVNDDYTPMEFVIDVLQKFFSYDVERATQLMLAVA 66 Query: 99 HQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +QG CGV+ E+AE KV V Y+R++++PL C +E+ Sbjct: 67 YQGKAICGVFTAEVAETKVAMVNKYARENEHPLLCTLEK 105 >gi|114563426|ref|YP_750939.1| ATP-dependent Clp protease adaptor protein ClpS [Shewanella frigidimarina NCIMB 400] gi|122299542|sp|Q081G4|CLPS_SHEFN RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|114334719|gb|ABI72101.1| ATP-dependent Clp protease adaptor protein ClpS [Shewanella frigidimarina NCIMB 400] Length = 102 Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 46/101 (45%), Positives = 71/101 (70%) Query: 37 IAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLK 96 +A+ N E + S+++ P +Y+V+L ND+YTPM+FV+ VLQ FF K+ + A IML Sbjct: 1 MAKLGNVEHIEEKVESELQPPHMYKVVLNNDDYTPMDFVVEVLQRFFEKNEQQAVDIMLA 60 Query: 97 VHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +H+QG G CGV+ + IAE KV QV ++R++Q+PL C +E+ Sbjct: 61 IHNQGKGLCGVFPFGIAETKVFQVNQFARENQHPLLCTLEK 101 >gi|15641156|ref|NP_230788.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121587408|ref|ZP_01677177.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio cholerae 2740-80] gi|121726248|ref|ZP_01679538.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio cholerae V52] gi|147674267|ref|YP_001216663.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio cholerae O395] gi|153214234|ref|ZP_01949269.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio cholerae 1587] gi|153802564|ref|ZP_01957150.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio cholerae MZO-3] gi|153816957|ref|ZP_01969624.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio cholerae NCTC 8457] gi|153821999|ref|ZP_01974666.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio cholerae B33] gi|153826033|ref|ZP_01978700.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio cholerae MZO-2] gi|153828695|ref|ZP_01981362.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio cholerae 623-39] gi|227081316|ref|YP_002809867.1| ATP-dependent Clp protease adaptor protein [Vibrio cholerae M66-2] gi|229505262|ref|ZP_04394772.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio cholerae BX 330286] gi|229511068|ref|ZP_04400547.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio cholerae B33] gi|229515526|ref|ZP_04404985.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio cholerae TMA 21] gi|229518188|ref|ZP_04407632.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio cholerae RC9] gi|229520427|ref|ZP_04409852.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio cholerae TM 11079-80] gi|229529768|ref|ZP_04419158.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio cholerae 12129(1)] gi|229608281|ref|YP_002878929.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio cholerae MJ-1236] gi|254225532|ref|ZP_04919142.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio cholerae V51] gi|254291568|ref|ZP_04962358.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio cholerae AM-19226] gi|254848271|ref|ZP_05237621.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio cholerae MO10] gi|255745555|ref|ZP_05419503.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio cholera CIRS 101] gi|262158371|ref|ZP_06029487.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio cholerae INDRE 91/1] gi|262170183|ref|ZP_06037871.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio cholerae RC27] gi|297578745|ref|ZP_06940673.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio cholerae RC385] gi|298498752|ref|ZP_07008559.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio cholerae MAK 757] gi|12230810|sp|Q9KSW3|CLPS_VIBCH RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|172047399|sp|A5F294|CLPS_VIBC3 RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|254763825|sp|C3LLJ0|CLPS_VIBCM RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|9655616|gb|AAF94302.1| conserved hypothetical protein [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121548328|gb|EAX58392.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio cholerae 2740-80] gi|121631194|gb|EAX63567.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio cholerae V52] gi|124115483|gb|EAY34303.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio cholerae 1587] gi|124121878|gb|EAY40621.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio cholerae MZO-3] gi|125622002|gb|EAZ50326.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio cholerae V51] gi|126512544|gb|EAZ75138.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio cholerae NCTC 8457] gi|126520464|gb|EAZ77687.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio cholerae B33] gi|146316150|gb|ABQ20689.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio cholerae O395] gi|148875848|gb|EDL73983.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio cholerae 623-39] gi|149740253|gb|EDM54400.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio cholerae MZO-2] gi|150422520|gb|EDN14477.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio cholerae AM-19226] gi|227009204|gb|ACP05416.1| ATP-dependent Clp protease adaptor protein [Vibrio cholerae M66-2] gi|227013010|gb|ACP09220.1| ATP-dependent Clp protease adaptor protein [Vibrio cholerae O395] gi|229333542|gb|EEN99028.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio cholerae 12129(1)] gi|229342525|gb|EEO07518.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio cholerae TM 11079-80] gi|229344903|gb|EEO09877.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio cholerae RC9] gi|229347295|gb|EEO12255.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio cholerae TMA 21] gi|229351033|gb|EEO15974.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio cholerae B33] gi|229357485|gb|EEO22402.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio cholerae BX 330286] gi|229370936|gb|ACQ61359.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio cholerae MJ-1236] gi|254843976|gb|EET22390.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio cholerae MO10] gi|255736630|gb|EET92027.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio cholera CIRS 101] gi|262021352|gb|EEY40065.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio cholerae RC27] gi|262029812|gb|EEY48460.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio cholerae INDRE 91/1] gi|297536339|gb|EFH75172.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio cholerae RC385] gi|297543085|gb|EFH79135.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio cholerae MAK 757] gi|327483847|gb|AEA78254.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio cholerae LMA3894-4] Length = 106 Score = 99.0 bits (245), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 44/86 (51%), Positives = 61/86 (70%) Query: 52 SKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYE 111 + V+ P +Y V+L ND+YTPM+FVI +L+ FF D E A +MLKVH++G CG + E Sbjct: 20 TAVKPPSMYHVVLNNDDYTPMDFVIEILERFFSMDIERATQVMLKVHYEGKAICGTFTAE 79 Query: 112 IAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +AE KV QV YSR++++PL C MEQ Sbjct: 80 VAETKVAQVTMYSRENEHPLLCTMEQ 105 >gi|221134865|ref|ZP_03561168.1| ATP-dependent Clp protease adaptor protein ClpS [Glaciecola sp. HTCC2999] Length = 106 Score = 99.0 bits (245), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 52/106 (49%), Positives = 68/106 (64%), Gaps = 1/106 (0%) Query: 32 MNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAK 91 M+K+ + D +E KV+ P +Y+V+L ND+YTPMEFV+ VL FF D E A Sbjct: 1 MSKENTSTIDEHKINE-SVEKKVQPPSMYKVILNNDDYTPMEFVVEVLCRFFNMDGEKAN 59 Query: 92 CIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +ML VH+QG CGVY EIAE KV QV Y+++HQ+PL C EQ Sbjct: 60 QVMLTVHYQGKAVCGVYTAEIAETKVMQVNQYAQKHQHPLLCSYEQ 105 >gi|212634694|ref|YP_002311219.1| ATP-dependent Clp protease adaptor protein ClpS [Shewanella piezotolerans WP3] gi|226706569|sp|B8CLI1|CLPS_SHEPW RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|212556178|gb|ACJ28632.1| ATP-dependent Clp protease adaptor protein ClpS [Shewanella piezotolerans WP3] Length = 102 Score = 99.0 bits (245), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 43/84 (51%), Positives = 62/84 (73%) Query: 54 VRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIA 113 ++ P +Y+V+L ND+YTPM+FVI +LQ FF KD A IML +HH+G G CG+Y + IA Sbjct: 18 LKQPSMYKVILNNDDYTPMDFVIEILQLFFRKDEAQATEIMLAIHHKGKGICGIYPFGIA 77 Query: 114 EMKVNQVMNYSRQHQYPLQCIMEQ 137 E KV QV ++RQ+++PL C +E+ Sbjct: 78 ETKVAQVNQFARQNEHPLLCSLEE 101 >gi|146311056|ref|YP_001176130.1| ATP-dependent Clp protease adaptor protein ClpS [Enterobacter sp. 638] gi|167008655|sp|A4W8P9|CLPS_ENT38 RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|145317932|gb|ABP60079.1| ATP-dependent Clp protease adaptor protein ClpS [Enterobacter sp. 638] Length = 106 Score = 99.0 bits (245), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 46/104 (44%), Positives = 69/104 (66%), Gaps = 2/104 (1%) Query: 34 KKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCI 93 K +FD + +VR ++ P +Y+V+L+ND+YTPMEFVI VLQ FF D E A + Sbjct: 4 KNDWLDFDQLAEDKVR--DALKPPSMYKVMLMNDDYTPMEFVIDVLQKFFSYDVERATQL 61 Query: 94 MLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 ML VH++G CG++ E+AE KV V Y+R++++PL C +E+ Sbjct: 62 MLTVHYRGKAICGIFTAEVAETKVAMVNEYARENEHPLLCTLEK 105 >gi|58582177|ref|YP_201193.1| ATP-dependent Clp protease adaptor protein ClpS [Xanthomonas oryzae pv. oryzae KACC10331] gi|58426771|gb|AAW75808.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae KACC10331] Length = 126 Score = 99.0 bits (245), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 53/109 (48%), Positives = 70/109 (64%), Gaps = 1/109 (0%) Query: 29 DSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHE 88 + RM + E D+ L E +V P Y+VLL+ND+YTPM+FV+ VL+ FF + E Sbjct: 18 NGRMPRNTSHEHDHGLMVEAS-KPEVAPPPRYQVLLLNDDYTPMDFVVTVLEQFFNLNLE 76 Query: 89 TAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 A IML VH +G G CGVY+ E+AE KV QV +SR +Q+PL C MEQ Sbjct: 77 QATQIMLHVHTRGRGVCGVYSREVAESKVAQVNEFSRMNQHPLLCTMEQ 125 >gi|317047538|ref|YP_004115186.1| ATP-dependent Clp protease adaptor protein ClpS [Pantoea sp. At-9b] gi|316949155|gb|ADU68630.1| ATP-dependent Clp protease adaptor protein ClpS [Pantoea sp. At-9b] Length = 131 Score = 99.0 bits (245), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 49/105 (46%), Positives = 70/105 (66%), Gaps = 2/105 (1%) Query: 33 NKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKC 92 N F++ + +VR ++ P +Y+V+L ND+YTPMEFVI VLQ FF D E A Sbjct: 28 NTNDWLNFEHLAEDKVR--EGLKPPSMYKVILNNDDYTPMEFVIDVLQKFFSYDVERATQ 85 Query: 93 IMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +MLKVH+QG CGV+ E+AE KV QV Y+R++++PL C +E+ Sbjct: 86 LMLKVHYQGKAICGVFTAEVAETKVAQVNIYARENEHPLLCTLEK 130 >gi|269468372|gb|EEZ80037.1| hypothetical protein Sup05_1280 [uncultured SUP05 cluster bacterium] Length = 99 Score = 99.0 bits (245), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 42/85 (49%), Positives = 64/85 (75%) Query: 53 KVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEI 112 KV+ P ++VLL+ND+YT M+FV+ VL FF K E A+ IMLK+H +G G CGVY ++I Sbjct: 12 KVKKPNRFQVLLLNDDYTTMDFVVEVLTKFFSKSEEAAQAIMLKIHLEGEGICGVYPHDI 71 Query: 113 AEMKVNQVMNYSRQHQYPLQCIMEQ 137 A+ KV+QV+++SR+ + PL C++ + Sbjct: 72 AQTKVSQVIDFSRKKEQPLMCVIRE 96 >gi|88703373|ref|ZP_01101089.1| ATP-dependent Clp protease adaptor protein ClpS [Congregibacter litoralis KT71] gi|88702087|gb|EAQ99190.1| ATP-dependent Clp protease adaptor protein ClpS [Congregibacter litoralis KT71] Length = 169 Score = 98.6 bits (244), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 45/85 (52%), Positives = 59/85 (69%) Query: 52 SKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYE 111 KV+ P LY+V+L+ND+YTPMEFV+ +L+ FF + E A IML VH G G CG+Y + Sbjct: 81 PKVKRPPLYKVVLLNDDYTPMEFVVEILEVFFKMNREQATQIMLTVHTHGKGVCGIYTKD 140 Query: 112 IAEMKVNQVMNYSRQHQYPLQCIME 136 IAE K QV Y+R HQ+PL C +E Sbjct: 141 IAETKSAQVNQYARDHQHPLLCEIE 165 >gi|268680246|ref|YP_003304677.1| ATP-dependent Clp protease adaptor protein ClpS [Sulfurospirillum deleyianum DSM 6946] gi|268618277|gb|ACZ12642.1| ATP-dependent Clp protease adaptor protein ClpS [Sulfurospirillum deleyianum DSM 6946] Length = 102 Score = 98.6 bits (244), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 45/84 (53%), Positives = 62/84 (73%) Query: 53 KVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEI 112 +++ P+LY+VLL+ND+Y+ MEFVI VL F+ E A IML VH +G G CGVYAYEI Sbjct: 17 EIKEPRLYKVLLLNDDYSSMEFVIKVLMQIFHHSFEKATEIMLSVHEKGKGLCGVYAYEI 76 Query: 113 AEMKVNQVMNYSRQHQYPLQCIME 136 AE KV+QV +++ ++PL+ IME Sbjct: 77 AETKVSQVRKMAKEEKFPLRAIME 100 >gi|260779177|ref|ZP_05888069.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio coralliilyticus ATCC BAA-450] gi|260605341|gb|EEX31636.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio coralliilyticus ATCC BAA-450] Length = 106 Score = 98.6 bits (244), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 43/86 (50%), Positives = 62/86 (72%) Query: 52 SKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYE 111 +KV+ P +Y V+L ND+YTPM+FVI +L+ FF D + A +MLKVH++G CG + E Sbjct: 20 TKVKPPSMYNVVLNNDDYTPMDFVIEILERFFSMDIDKATQVMLKVHYEGKAICGTFTAE 79 Query: 112 IAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +AE KV QV YS+++++PL C MEQ Sbjct: 80 VAETKVAQVTMYSQENEHPLLCTMEQ 105 >gi|323493245|ref|ZP_08098374.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio brasiliensis LMG 20546] gi|323312511|gb|EGA65646.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio brasiliensis LMG 20546] Length = 106 Score = 98.6 bits (244), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 43/86 (50%), Positives = 62/86 (72%) Query: 52 SKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYE 111 +KV+ P +Y V+L ND+YTPM+FVI +L+ FF D + A +ML+VH++G CG Y E Sbjct: 20 TKVKPPSMYNVVLNNDDYTPMDFVIEILERFFSMDIDKATQVMLQVHYEGKAICGTYTAE 79 Query: 112 IAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +AE KV QV YS+++++PL C MEQ Sbjct: 80 VAETKVAQVTMYSKENEHPLLCTMEQ 105 >gi|254283858|ref|ZP_04958826.1| ATP-dependent Clp protease adaptor protein ClpS [gamma proteobacterium NOR51-B] gi|219680061|gb|EED36410.1| ATP-dependent Clp protease adaptor protein ClpS [gamma proteobacterium NOR51-B] Length = 132 Score = 98.6 bits (244), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 43/85 (50%), Positives = 60/85 (70%) Query: 52 SKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYE 111 K++ P LYRV+L+ND+YTPMEFV+ VL+ FF + + A +ML VH QG G CG+Y + Sbjct: 41 PKLKRPPLYRVILLNDDYTPMEFVVEVLERFFSMNRDKATQVMLAVHTQGKGVCGIYPRD 100 Query: 112 IAEMKVNQVMNYSRQHQYPLQCIME 136 IAE K QV +++HQ+PL C +E Sbjct: 101 IAETKAAQVNQCAKEHQHPLLCEVE 125 >gi|326405326|ref|YP_004285408.1| ATP-dependent Clp protease adaptor protein ClpS [Acidiphilium multivorum AIU301] gi|325052188|dbj|BAJ82526.1| ATP-dependent Clp protease adaptor protein ClpS [Acidiphilium multivorum AIU301] Length = 106 Score = 98.6 bits (244), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 40/85 (47%), Positives = 62/85 (72%) Query: 52 SKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYE 111 ++ + P LYRV++ ND+YTPMEFV+ L F K + A I L++H +G+G CG++ YE Sbjct: 20 ARAKRPPLYRVMMFNDDYTPMEFVVATLVGLFGKTTDEAGRIALRIHRRGVGVCGIFTYE 79 Query: 112 IAEMKVNQVMNYSRQHQYPLQCIME 136 IAE K+ QV+ +R++Q+PLQC++E Sbjct: 80 IAETKMIQVLELARENQHPLQCMIE 104 >gi|166712083|ref|ZP_02243290.1| ATP-dependent Clp protease adaptor protein ClpS [Xanthomonas oryzae pv. oryzicola BLS256] Length = 112 Score = 98.6 bits (244), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 48/86 (55%), Positives = 61/86 (70%) Query: 52 SKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYE 111 +V P Y+VLL+ND+YTPM+FV+ VLQ FF + E A IML VH +G G CGVY+ E Sbjct: 26 PEVAPPPRYQVLLLNDDYTPMDFVVTVLQQFFNLNLEQATQIMLHVHTRGRGVCGVYSRE 85 Query: 112 IAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +AE KV QV +SR +Q+PL C MEQ Sbjct: 86 VAESKVAQVNEFSRMNQHPLLCTMEQ 111 >gi|88860127|ref|ZP_01134766.1| modulator of ClpA substrate specificity [Pseudoalteromonas tunicata D2] gi|88818121|gb|EAR27937.1| modulator of ClpA substrate specificity [Pseudoalteromonas tunicata D2] Length = 105 Score = 98.6 bits (244), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 48/85 (56%), Positives = 60/85 (70%) Query: 53 KVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEI 112 K+R PK Y V+L ND+YTPM+FVI V+ FF K E A IMLKVH++G CGVY+ EI Sbjct: 20 KLRPPKQYHVILNNDDYTPMDFVIEVIMKFFNKTSEQAAEIMLKVHYEGKAVCGVYSAEI 79 Query: 113 AEMKVNQVMNYSRQHQYPLQCIMEQ 137 AE KV QV Y+R +++PL C EQ Sbjct: 80 AETKVAQVNQYARDNEHPLLCSYEQ 104 >gi|89901532|ref|YP_524003.1| ATP-dependent Clp protease adaptor protein ClpS [Rhodoferax ferrireducens T118] gi|122478825|sp|Q21UT1|CLPS_RHOFD RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|89346269|gb|ABD70472.1| ATP-dependent Clp protease adaptor protein ClpS [Rhodoferax ferrireducens T118] Length = 120 Score = 98.2 bits (243), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 43/88 (48%), Positives = 64/88 (72%) Query: 49 RFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVY 108 R + K + P +Y+V+++ND+YTPMEFV+ V+Q FF KD E A IMLK+H G G CGVY Sbjct: 29 RRTQKTKPPHMYQVVMLNDDYTPMEFVVVVIQEFFGKDLEAATRIMLKIHLDGKGVCGVY 88 Query: 109 AYEIAEMKVNQVMNYSRQHQYPLQCIME 136 + ++A KV+QV++ + + +PL+CI E Sbjct: 89 SKDVAATKVDQVLDAANKAGHPLKCISE 116 >gi|117619917|ref|YP_856387.1| ATP-dependent Clp protease adaptor protein ClpS [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|158512298|sp|A0KJD6|CLPS_AERHH RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|117561324|gb|ABK38272.1| ATP-dependent Clp protease adaptor protein ClpS [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 105 Score = 98.2 bits (243), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 44/86 (51%), Positives = 61/86 (70%) Query: 52 SKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYE 111 +K++ P +Y+V+L ND+YTPMEFV+ VLQ FF D + A +ML VH+ G G CG + E Sbjct: 19 TKLQPPPMYKVVLNNDDYTPMEFVVEVLQKFFGMDLDKATQVMLSVHYSGKGVCGTFTAE 78 Query: 112 IAEMKVNQVMNYSRQHQYPLQCIMEQ 137 IAE KV QV Y+R +++PL C ME+ Sbjct: 79 IAETKVVQVNTYARNNEHPLLCTMEK 104 >gi|326316818|ref|YP_004234490.1| ATP-dependent Clp protease adaptor protein ClpS [Acidovorax avenae subsp. avenae ATCC 19860] gi|323373654|gb|ADX45923.1| ATP-dependent Clp protease adaptor protein ClpS [Acidovorax avenae subsp. avenae ATCC 19860] Length = 112 Score = 98.2 bits (243), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 44/88 (50%), Positives = 62/88 (70%) Query: 49 RFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVY 108 R + + + P++Y+V+++ND+YTPMEFVI VLQ FF KD E A IMLK+H G G CGVY Sbjct: 22 RRTQRTQPPQMYQVVMLNDDYTPMEFVIVVLQEFFGKDREAATQIMLKIHLDGKGVCGVY 81 Query: 109 AYEIAEMKVNQVMNYSRQHQYPLQCIME 136 + ++A KV QV + + +PLQC+ E Sbjct: 82 SRDVAATKVEQVREAAHKAGHPLQCLSE 109 >gi|120611897|ref|YP_971575.1| ATP-dependent Clp protease adaptor protein ClpS [Acidovorax citrulli AAC00-1] gi|158513033|sp|A1TS63|CLPS_ACIAC RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|120590361|gb|ABM33801.1| ATP-dependent Clp protease adaptor protein ClpS [Acidovorax citrulli AAC00-1] Length = 122 Score = 98.2 bits (243), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 44/88 (50%), Positives = 62/88 (70%) Query: 49 RFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVY 108 R + + + P++Y+V+++ND+YTPMEFVI VLQ FF KD E A IMLK+H G G CGVY Sbjct: 32 RRTQRTQPPQMYQVVMLNDDYTPMEFVIVVLQEFFGKDREAATQIMLKIHLDGKGVCGVY 91 Query: 109 AYEIAEMKVNQVMNYSRQHQYPLQCIME 136 + ++A KV QV + + +PLQC+ E Sbjct: 92 SRDVAATKVEQVREAAHKAGHPLQCLSE 119 >gi|330829987|ref|YP_004392939.1| ATP-dependent Clp protease adapter protein clpS [Aeromonas veronii B565] gi|328805123|gb|AEB50322.1| ATP-dependent Clp protease adapter protein clpS [Aeromonas veronii B565] Length = 105 Score = 98.2 bits (243), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 44/86 (51%), Positives = 62/86 (72%) Query: 52 SKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYE 111 +K++ P +Y+V+L ND+YTPMEFV+ VLQ FF D + A +ML VH+ G G CG++ E Sbjct: 19 TKLQPPPMYKVVLNNDDYTPMEFVVEVLQKFFGMDLDKATQVMLSVHYSGKGVCGMFTAE 78 Query: 112 IAEMKVNQVMNYSRQHQYPLQCIMEQ 137 IAE KV QV Y+R +++PL C ME+ Sbjct: 79 IAETKVVQVNTYARNNEHPLLCTMEK 104 >gi|224436508|ref|ZP_03657522.1| hypothetical protein HcinC1_01115 [Helicobacter cinaedi CCUG 18818] Length = 105 Score = 98.2 bits (243), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 43/102 (42%), Positives = 63/102 (61%) Query: 36 GIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIML 95 + FD +S + + PKLYRVLL+ND++T M FV H+L F K + A+ I L Sbjct: 2 AFSSFDTSFESWTHTGTMLEEPKLYRVLLLNDDWTAMNFVTHILMEVFDKTSQEARAITL 61 Query: 96 KVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 KVH++G G CG+Y Y+IAE+K V +++ YPL+ I E+ Sbjct: 62 KVHNEGKGVCGIYPYDIAELKTQLVSQKAKEQGYPLRVITEE 103 >gi|270159871|ref|ZP_06188527.1| ATP-dependent Clp protease adaptor protein ClpS [Legionella longbeachae D-4968] gi|289165375|ref|YP_003455513.1| regulatory protein for ClpA substrate specificity [Legionella longbeachae NSW150] gi|269988210|gb|EEZ94465.1| ATP-dependent Clp protease adaptor protein ClpS [Legionella longbeachae D-4968] gi|288858548|emb|CBJ12429.1| regulatory protein for ClpA substrate specificity [Legionella longbeachae NSW150] Length = 107 Score = 97.8 bits (242), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 46/93 (49%), Positives = 68/93 (73%) Query: 46 SEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGEC 105 +E SS+++VP+ Y+V+L+ND+YTPM+FV+ VL++FF+ E A IML+VH QG G C Sbjct: 15 AEPEMSSEIKVPRKYKVVLLNDDYTPMDFVVDVLKHFFHLSEEMAVQIMLQVHFQGKGVC 74 Query: 106 GVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 GV+ +IAE KV V Y+R++Q+PL ME + Sbjct: 75 GVFTRDIAETKVALVNEYARRNQHPLLSSMEPE 107 >gi|54308344|ref|YP_129364.1| ATP-dependent Clp protease adaptor protein ClpS [Photobacterium profundum SS9] gi|67460286|sp|Q6LT14|CLPS_PHOPR RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|46912772|emb|CAG19562.1| conserved hypothetical protein [Photobacterium profundum SS9] Length = 106 Score = 97.8 bits (242), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 50/108 (46%), Positives = 72/108 (66%), Gaps = 4/108 (3%) Query: 30 SRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHET 89 S++ + I E D LD E +V+ P +Y+V+L ND+YTPM+FVI VLQ FF D E Sbjct: 2 SKLYEWIIPESD-VLDKE---EVQVKPPAMYKVVLNNDDYTPMDFVIEVLQKFFSMDMEK 57 Query: 90 AKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 A +ML VH++G CG + E+AE KV QVM ++R++++PL C ME+ Sbjct: 58 ATQLMLNVHYEGKAICGTFTAEVAETKVAQVMMHARENEHPLLCTMEK 105 >gi|308272838|emb|CBX29442.1| ATP-dependent Clp protease adapter protein clpS [uncultured Desulfobacterium sp.] Length = 105 Score = 97.8 bits (242), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 46/100 (46%), Positives = 66/100 (66%), Gaps = 2/100 (2%) Query: 38 AEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKV 97 E + + SE R +++ P +++VLL ND+YT M+FV+ +L FYK E A IML V Sbjct: 7 PEIEESITSETR--KEIKEPSMFKVLLHNDDYTTMDFVVEILMRVFYKSIEEAIQIMLNV 64 Query: 98 HHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 H QG+G CG+Y YEIAE K+N V + SR +PL+C +E+ Sbjct: 65 HRQGMGVCGLYTYEIAETKMNSVHSLSRDRGFPLRCSIEK 104 >gi|325919554|ref|ZP_08181568.1| hypothetical protein XGA_0507 [Xanthomonas gardneri ATCC 19865] gi|325549963|gb|EGD20803.1| hypothetical protein XGA_0507 [Xanthomonas gardneri ATCC 19865] Length = 106 Score = 97.8 bits (242), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 51/106 (48%), Positives = 68/106 (64%), Gaps = 1/106 (0%) Query: 32 MNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAK 91 M + E+D+ L E +V P Y+VLL+ND+YTPM+FV+ VL+ FF E A Sbjct: 1 MPRNTTHEYDHGLMVEAS-KPEVAPPPRYQVLLLNDDYTPMDFVVTVLEQFFNLSLEQAT 59 Query: 92 CIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +ML VH +G G CGVY+ E+AE KV QV +SR +Q+PL C MEQ Sbjct: 60 QVMLHVHTRGRGVCGVYSREVAESKVAQVNEFSRMNQHPLLCTMEQ 105 >gi|242239694|ref|YP_002987875.1| ATP-dependent Clp protease adaptor protein ClpS [Dickeya dadantii Ech703] gi|242131751|gb|ACS86053.1| ATP-dependent Clp protease adaptor protein ClpS [Dickeya dadantii Ech703] Length = 106 Score = 97.8 bits (242), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 45/84 (53%), Positives = 62/84 (73%) Query: 54 VRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIA 113 ++ P +Y+V+L ND+YTPMEFVI VLQ FF D E A +ML VH+QG CGVY+ E+A Sbjct: 22 LQPPSMYKVILNNDDYTPMEFVIDVLQKFFSYDIERATQLMLTVHYQGKAICGVYSAEVA 81 Query: 114 EMKVNQVMNYSRQHQYPLQCIMEQ 137 E KV QV Y+R++++PL C +E+ Sbjct: 82 ETKVAQVNRYARENEHPLLCTLEK 105 >gi|261252480|ref|ZP_05945053.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio orientalis CIP 102891] gi|260935871|gb|EEX91860.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio orientalis CIP 102891] Length = 106 Score = 97.4 bits (241), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 43/86 (50%), Positives = 61/86 (70%) Query: 52 SKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYE 111 +KV+ P +Y V+L ND+YTPM+FVI +L+ FF D + A +ML+VH++G CG Y E Sbjct: 20 TKVKPPSMYNVVLNNDDYTPMDFVIEILERFFSMDIDKATQVMLQVHYEGKAICGTYTAE 79 Query: 112 IAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +AE KV QV YS ++++PL C MEQ Sbjct: 80 VAETKVAQVTMYSTENEHPLLCTMEQ 105 >gi|220904698|ref|YP_002480010.1| ATP-dependent Clp protease adaptor protein ClpS [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219868997|gb|ACL49332.1| ATP-dependent Clp protease adaptor protein ClpS [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 106 Score = 97.4 bits (241), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 45/93 (48%), Positives = 63/93 (67%) Query: 45 DSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGE 104 +S+V K++ P YRVLL ND+YT M+FV+ VL + F K + A IML VH QG+G+ Sbjct: 12 ESQVIVEKKLKEPDRYRVLLHNDDYTSMDFVVAVLCSIFNKTTQEATAIMLNVHQQGVGQ 71 Query: 105 CGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 CGVY +E+AE KV +V +R +PL+C ME+ Sbjct: 72 CGVYTHEVAETKVKRVHQAARAAGFPLKCTMEK 104 >gi|254786019|ref|YP_003073448.1| ATP-dependent Clp protease adaptor protein ClpS [Teredinibacter turnerae T7901] gi|237686070|gb|ACR13334.1| Sua5/YciO/YrdC/YwlC [Teredinibacter turnerae T7901] Length = 124 Score = 97.4 bits (241), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 41/84 (48%), Positives = 63/84 (75%) Query: 53 KVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEI 112 +++ P +Y+V+L+ND+YTPMEFV+HVL++FF D E A +ML VH +G CGVY+ ++ Sbjct: 33 RLKKPPMYKVVLLNDDYTPMEFVVHVLESFFNMDREKATHVMLTVHTKGKAVCGVYSRDV 92 Query: 113 AEMKVNQVMNYSRQHQYPLQCIME 136 AE K QV ++RQ+++PL C +E Sbjct: 93 AETKAMQVNQFARQNEHPLLCEIE 116 >gi|308186236|ref|YP_003930367.1| ATP-dependent Clp protease adaptor protein [Pantoea vagans C9-1] gi|308056746|gb|ADO08918.1| ATP-dependent Clp protease adaptor protein [Pantoea vagans C9-1] Length = 126 Score = 97.4 bits (241), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 47/109 (43%), Positives = 70/109 (64%), Gaps = 2/109 (1%) Query: 29 DSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHE 88 ++ N F++ + +VR ++ P +Y+V+L ND+YTPMEFVI V+Q FF D E Sbjct: 19 NTMANTNDWLNFEHLAEDKVR--EGLKPPSMYKVILNNDDYTPMEFVIDVVQKFFSYDVE 76 Query: 89 TAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 A +MLKVH+ G CGV+ E+AE K QV NY+R++ +PL C +E+ Sbjct: 77 RATQLMLKVHYHGKAICGVFTAEVAETKAAQVNNYARENHHPLLCTLEK 125 >gi|227329247|ref|ZP_03833271.1| ATP-dependent Clp protease adaptor protein ClpS [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 106 Score = 97.4 bits (241), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 45/85 (52%), Positives = 62/85 (72%) Query: 53 KVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEI 112 K++ P +Y V+L ND+YTPMEFVI VLQ FF D E A +ML VH+QG CGV++ E+ Sbjct: 21 KLQPPSMYNVVLNNDDYTPMEFVIDVLQKFFSYDIERATQLMLTVHYQGKAICGVFSAEV 80 Query: 113 AEMKVNQVMNYSRQHQYPLQCIMEQ 137 AE KV QV Y+R++++PL C +E+ Sbjct: 81 AETKVVQVNRYARENEHPLLCTLEK 105 >gi|227112014|ref|ZP_03825670.1| ATP-dependent Clp protease adaptor protein ClpS [Pectobacterium carotovorum subsp. brasiliensis PBR1692] gi|253688098|ref|YP_003017288.1| ATP-dependent Clp protease adaptor protein ClpS [Pectobacterium carotovorum subsp. carotovorum PC1] gi|261821257|ref|YP_003259363.1| ATP-dependent Clp protease adaptor protein ClpS [Pectobacterium wasabiae WPP163] gi|259491248|sp|C6DF43|CLPS_PECCP RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|251754676|gb|ACT12752.1| ATP-dependent Clp protease adaptor protein ClpS [Pectobacterium carotovorum subsp. carotovorum PC1] gi|261605270|gb|ACX87756.1| ATP-dependent Clp protease adaptor protein ClpS [Pectobacterium wasabiae WPP163] Length = 106 Score = 97.4 bits (241), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 45/85 (52%), Positives = 62/85 (72%) Query: 53 KVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEI 112 K++ P +Y V+L ND+YTPMEFVI VLQ FF D E A +ML VH+QG CGV++ E+ Sbjct: 21 KLQPPSMYNVVLNNDDYTPMEFVIDVLQKFFSYDIERATQLMLTVHYQGKAICGVFSAEV 80 Query: 113 AEMKVNQVMNYSRQHQYPLQCIMEQ 137 AE KV QV Y+R++++PL C +E+ Sbjct: 81 AETKVVQVNRYARENEHPLLCTLEK 105 >gi|54293794|ref|YP_126209.1| hypothetical protein lpl0850 [Legionella pneumophila str. Lens] gi|148360536|ref|YP_001251743.1| ATP-dependent Clp protease adaptor protein [Legionella pneumophila str. Corby] gi|296106398|ref|YP_003618098.1| ATP-dependent Clp protease adaptor protein ClpS [Legionella pneumophila 2300/99 Alcoy] gi|67460217|sp|Q5WY89|CLPS_LEGPL RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|166214737|sp|A5IG97|CLPS_LEGPC RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|53753626|emb|CAH15084.1| hypothetical protein lpl0850 [Legionella pneumophila str. Lens] gi|148282309|gb|ABQ56397.1| ATP-dependent Clp protease adaptor protein [Legionella pneumophila str. Corby] gi|295648299|gb|ADG24146.1| ATP-dependent Clp protease adaptor protein ClpS [Legionella pneumophila 2300/99 Alcoy] gi|307609611|emb|CBW99113.1| hypothetical protein LPW_08981 [Legionella pneumophila 130b] Length = 111 Score = 97.4 bits (241), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 49/103 (47%), Positives = 72/103 (69%), Gaps = 4/103 (3%) Query: 34 KKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCI 93 + GIA D L +E+ S+ ++ P+ Y+VLL+ND+YTPM+FV+ VL++FF+ + E A + Sbjct: 11 QTGIA--DTELSTEI--STAIKRPRKYKVLLLNDDYTPMDFVVEVLKHFFHLNEEVAIQV 66 Query: 94 MLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIME 136 ML+VH QG G CGV+ +IAE KV V Y+R +Q+PL ME Sbjct: 67 MLQVHFQGKGVCGVFTRDIAETKVALVNEYARMNQHPLLSSME 109 >gi|194365699|ref|YP_002028309.1| ATP-dependent Clp protease adaptor protein ClpS [Stenotrophomonas maltophilia R551-3] gi|238693433|sp|B4SIN7|CLPS_STRM5 RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|194348503|gb|ACF51626.1| ATP-dependent Clp protease adaptor protein ClpS [Stenotrophomonas maltophilia R551-3] Length = 108 Score = 97.1 bits (240), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 45/86 (52%), Positives = 60/86 (69%) Query: 52 SKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYE 111 +V P Y+V+L+ND+YTPM+FV+ VLQ FF D + A +ML VH +G G CGV+ E Sbjct: 22 PEVAPPPFYQVMLLNDDYTPMDFVVDVLQQFFTMDLDKATQVMLHVHTRGRGVCGVFTRE 81 Query: 112 IAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +AE KV QV YSR +Q+PL C ME+ Sbjct: 82 VAETKVAQVNEYSRMNQHPLLCTMEK 107 >gi|254428859|ref|ZP_05042566.1| ATP-dependent Clp protease adaptor protein ClpS [Alcanivorax sp. DG881] gi|196195028|gb|EDX89987.1| ATP-dependent Clp protease adaptor protein ClpS [Alcanivorax sp. DG881] Length = 94 Score = 97.1 bits (240), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 41/86 (47%), Positives = 62/86 (72%) Query: 52 SKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYE 111 K++ P +Y+VL++ND+YTPM+FV+ +L++FF E A +ML VH +G CGVY + Sbjct: 8 PKLKPPSMYKVLMLNDDYTPMDFVVEILEDFFNLGREQATRVMLTVHTEGKAVCGVYPQD 67 Query: 112 IAEMKVNQVMNYSRQHQYPLQCIMEQ 137 IAE K QV+ Y+R++Q+PL C +EQ Sbjct: 68 IAETKATQVVEYARENQHPLMCQVEQ 93 >gi|52841053|ref|YP_094852.1| ATP-dependent Clp protease adaptor protein ClpS [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|54296838|ref|YP_123207.1| ATP-dependent Clp protease adaptor protein ClpS [Legionella pneumophila str. Paris] gi|67460221|sp|Q5X6T6|CLPS_LEGPA RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|67460231|sp|Q5ZXB5|CLPS_LEGPH RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|52628164|gb|AAU26905.1| hypothetical protein lpg0817 [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|53750623|emb|CAH12030.1| hypothetical protein lpp0879 [Legionella pneumophila str. Paris] Length = 111 Score = 97.1 bits (240), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 49/103 (47%), Positives = 72/103 (69%), Gaps = 4/103 (3%) Query: 34 KKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCI 93 + GIA D L +E+ S+ ++ P+ Y+VLL+ND+YTPM+FV+ VL++FF+ + E A + Sbjct: 11 QTGIA--DTELSTEI--STAIKRPRKYKVLLLNDDYTPMDFVVEVLKHFFHLNEEVAIQV 66 Query: 94 MLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIME 136 ML+VH QG G CGV+ +IAE KV V Y+R +Q+PL ME Sbjct: 67 MLQVHFQGKGVCGVFTRDIAETKVALVNEYARMNQHPLLSSME 109 >gi|291613434|ref|YP_003523591.1| ATP-dependent Clp protease adaptor protein ClpS [Sideroxydans lithotrophicus ES-1] gi|291583546|gb|ADE11204.1| ATP-dependent Clp protease adaptor protein ClpS [Sideroxydans lithotrophicus ES-1] Length = 100 Score = 97.1 bits (240), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 43/86 (50%), Positives = 63/86 (73%) Query: 52 SKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYE 111 SK + PKLY+V+L+ND++T MEFVI VL+ FF E A +ML++H++G CGVY + Sbjct: 14 SKTKPPKLYKVILLNDDFTTMEFVIEVLRIFFSMGQERATQVMLQIHNEGSAVCGVYPKD 73 Query: 112 IAEMKVNQVMNYSRQHQYPLQCIMEQ 137 IAE KV+QV +++QH +PL+C E+ Sbjct: 74 IAETKVSQVSEFAKQHGHPLRCQTEE 99 >gi|152990128|ref|YP_001355850.1| ATP-dependent Clp protease, adaptor protein ClpS [Nitratiruptor sp. SB155-2] gi|151421989|dbj|BAF69493.1| ATP-dependent Clp protease, adaptor protein ClpS [Nitratiruptor sp. SB155-2] Length = 97 Score = 97.1 bits (240), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 43/92 (46%), Positives = 64/92 (69%) Query: 47 EVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECG 106 E + K+ PK Y+V L+ND+YT M+FV+ +L + F K +E A IML +H QG G CG Sbjct: 6 ETKEVVKLEEPKKYKVFLLNDDYTTMDFVVDILCDIFDKSYEEAVNIMLTIHRQGKGLCG 65 Query: 107 VYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 +Y YEIAE K++QV +R H++PL+ +ME++ Sbjct: 66 IYTYEIAETKIDQVHRLARAHEFPLKAVMEEE 97 >gi|209695650|ref|YP_002263579.1| ATP-dependent Clp protease adaptor protein ClpS [Aliivibrio salmonicida LFI1238] gi|238066649|sp|B6EIX3|CLPS_ALISL RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|208009602|emb|CAQ79898.1| ATP-dependent Clp protease adaptor protein ClpS [Aliivibrio salmonicida LFI1238] Length = 106 Score = 97.1 bits (240), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 44/86 (51%), Positives = 60/86 (69%) Query: 52 SKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYE 111 + ++ P +Y+V+L ND+YTPMEFV+ VL FF D E A +ML VH++G CGV+ E Sbjct: 20 TGLKPPPMYKVVLNNDDYTPMEFVVEVLDKFFSMDLEKATQLMLTVHYEGKAVCGVFTAE 79 Query: 112 IAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +AE KV QV YSR +++PL C MEQ Sbjct: 80 VAETKVAQVNIYSRDNEHPLLCTMEQ 105 >gi|304397051|ref|ZP_07378930.1| ATP-dependent Clp protease adaptor protein ClpS [Pantoea sp. aB] gi|304355200|gb|EFM19568.1| ATP-dependent Clp protease adaptor protein ClpS [Pantoea sp. aB] Length = 106 Score = 97.1 bits (240), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 47/105 (44%), Positives = 68/105 (64%), Gaps = 2/105 (1%) Query: 33 NKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKC 92 N F++ + +VR ++ P +Y+V+L ND+YTPMEFVI V+Q FF D E A Sbjct: 3 NTNDWLNFEHLAEDKVR--EGLKPPSMYKVILNNDDYTPMEFVIDVVQKFFSYDVERATQ 60 Query: 93 IMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +MLKVH+ G CGV+ E+AE K QV NY+R++ +PL C +E+ Sbjct: 61 LMLKVHYHGKAICGVFTAEVAETKAAQVNNYARENHHPLLCTLEK 105 >gi|190574283|ref|YP_001972128.1| putative ATP-dependent Clp protease adaptor protein ClpS [Stenotrophomonas maltophilia K279a] gi|229889824|sp|B2FQX5|CLPS_STRMK RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|190012205|emb|CAQ45828.1| putative ATP-dependent Clp protease adaptor protein ClpS [Stenotrophomonas maltophilia K279a] Length = 108 Score = 97.1 bits (240), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 45/86 (52%), Positives = 60/86 (69%) Query: 52 SKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYE 111 +V P Y+V+L+ND+YTPM+FV+ VLQ FF D + A +ML VH +G G CGV+ E Sbjct: 22 PEVAPPPFYQVMLLNDDYTPMDFVVDVLQQFFSMDLDKATQVMLHVHTRGRGVCGVFTRE 81 Query: 112 IAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +AE KV QV YSR +Q+PL C ME+ Sbjct: 82 VAETKVAQVNEYSRMNQHPLLCTMEK 107 >gi|192360778|ref|YP_001983029.1| ATP-dependent Clp protease adaptor protein ClpS [Cellvibrio japonicus Ueda107] gi|190686943|gb|ACE84621.1| ATP-dependent Clp protease adaptor protein clpS [Cellvibrio japonicus Ueda107] Length = 125 Score = 97.1 bits (240), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 46/104 (44%), Positives = 65/104 (62%), Gaps = 1/104 (0%) Query: 33 NKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKC 92 N E D L + V K++ P +Y+V+L+ND+YTPM+FV+H+L+ FF E A Sbjct: 15 NDDSAGESDGGL-AVVTAKPKLKRPSMYKVVLLNDDYTPMDFVVHILETFFSMTREKATH 73 Query: 93 IMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIME 136 +ML VH G CG+Y +IAE K QV YSR++Q+PL C +E Sbjct: 74 VMLTVHVHGKAVCGIYTRDIAETKAAQVNQYSRENQHPLLCEIE 117 >gi|188534289|ref|YP_001908086.1| ATP-dependent Clp protease adaptor protein ClpS [Erwinia tasmaniensis Et1/99] gi|238689683|sp|B2VC66|CLPS_ERWT9 RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|188029331|emb|CAO97208.1| ATP-dependent Clp protease adaptor protein [Erwinia tasmaniensis Et1/99] Length = 106 Score = 97.1 bits (240), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 46/98 (46%), Positives = 66/98 (67%), Gaps = 2/98 (2%) Query: 40 FDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHH 99 F+ D +VR +++ P +Y+V+L ND++TPMEFVI VLQ FF D E A +ML VH+ Sbjct: 10 FEQLADDKVR--EELKPPSMYKVILNNDDFTPMEFVIDVLQKFFSYDIERATQLMLTVHY 67 Query: 100 QGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 QG CGV+ E+AE KV V Y+R +++PL C +E+ Sbjct: 68 QGKAICGVFTAEVAETKVAHVNKYARDNEHPLLCTLEK 105 >gi|188576738|ref|YP_001913667.1| ATP-dependent Clp protease adaptor protein ClpS [Xanthomonas oryzae pv. oryzae PXO99A] gi|188576929|ref|YP_001913858.1| ATP-dependent Clp protease adaptor protein ClpS [Xanthomonas oryzae pv. oryzae PXO99A] gi|325927856|ref|ZP_08189080.1| hypothetical protein XPE_3120 [Xanthomonas perforans 91-118] gi|188521190|gb|ACD59135.1| ATP-dependent Clp protease adaptor protein ClpS [Xanthomonas oryzae pv. oryzae PXO99A] gi|188521381|gb|ACD59326.1| ATP-dependent Clp protease adaptor protein ClpS [Xanthomonas oryzae pv. oryzae PXO99A] gi|325541696|gb|EGD13214.1| hypothetical protein XPE_3120 [Xanthomonas perforans 91-118] Length = 93 Score = 96.7 bits (239), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 47/86 (54%), Positives = 61/86 (70%) Query: 52 SKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYE 111 +V P Y+VLL+ND+YTPM+FV+ VL+ FF + E A IML VH +G G CGVY+ E Sbjct: 7 PEVAPPPRYQVLLLNDDYTPMDFVVTVLEQFFNLNLEQATQIMLHVHTRGRGVCGVYSRE 66 Query: 112 IAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +AE KV QV +SR +Q+PL C MEQ Sbjct: 67 VAESKVAQVNEFSRMNQHPLLCTMEQ 92 >gi|261856347|ref|YP_003263630.1| ATP-dependent Clp protease adaptor protein ClpS [Halothiobacillus neapolitanus c2] gi|261836816|gb|ACX96583.1| ATP-dependent Clp protease adaptor protein ClpS [Halothiobacillus neapolitanus c2] Length = 104 Score = 96.7 bits (239), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 43/92 (46%), Positives = 64/92 (69%) Query: 45 DSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGE 104 D+E + V P +Y+V+L+ND++TPM+FVI +L FY E A+ +ML+VHH+G G Sbjct: 9 DTESIPEAIVAEPPMYQVILLNDDFTPMDFVIRILVELFYLSTEQAERVMLEVHHKGRGV 68 Query: 105 CGVYAYEIAEMKVNQVMNYSRQHQYPLQCIME 136 CG++ EIAE +V QV +RQ+ +PL C+ME Sbjct: 69 CGIFTREIAETRVAQVNQVARQNDHPLLCVME 100 >gi|160898941|ref|YP_001564523.1| ATP-dependent Clp protease adaptor protein ClpS [Delftia acidovorans SPH-1] gi|160364525|gb|ABX36138.1| ATP-dependent Clp protease adaptor protein ClpS [Delftia acidovorans SPH-1] Length = 125 Score = 96.7 bits (239), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 43/88 (48%), Positives = 63/88 (71%) Query: 49 RFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVY 108 R +V+ P++Y+V+++ND++TPMEFVI VLQ F KD ETA IMLK+H G G CGVY Sbjct: 35 RRRQRVQPPQMYQVVMLNDDFTPMEFVIIVLQELFGKDRETATQIMLKIHLDGRGVCGVY 94 Query: 109 AYEIAEMKVNQVMNYSRQHQYPLQCIME 136 + ++A KV QV+ +++ +PLQ + E Sbjct: 95 SRDVAATKVEQVLQAAQKAGHPLQAMFE 122 >gi|87122218|ref|ZP_01078101.1| hypothetical protein MED121_05518 [Marinomonas sp. MED121] gi|86162538|gb|EAQ63820.1| hypothetical protein MED121_05518 [Marinomonas sp. MED121] Length = 114 Score = 96.7 bits (239), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 40/87 (45%), Positives = 66/87 (75%) Query: 51 SSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAY 110 ++++ P +Y+V+L+ND++TPM+FV+ VLQ FFY D E A+ +ML+VH++G G CGVY + Sbjct: 26 ETELKPPSMYQVVLLNDDFTPMDFVVFVLQKFFYMDGEKAQKVMLEVHNKGKGVCGVYPF 85 Query: 111 EIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +IAE KV V + Q+++PL C +++ Sbjct: 86 DIAETKVAMVQQFVEQNEHPLMCDLQK 112 >gi|254514303|ref|ZP_05126364.1| Sua5/YciO/YrdC/YwlC [gamma proteobacterium NOR5-3] gi|219676546|gb|EED32911.1| Sua5/YciO/YrdC/YwlC [gamma proteobacterium NOR5-3] Length = 134 Score = 96.7 bits (239), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 43/85 (50%), Positives = 60/85 (70%) Query: 52 SKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYE 111 +++ P LY+V+L+ND+YTPMEFV+ VL+ FF + E A +ML VH QG G CG+Y + Sbjct: 46 PQLKRPPLYKVVLLNDDYTPMEFVVEVLEVFFKMNREQATQVMLTVHTQGKGVCGIYTKD 105 Query: 112 IAEMKVNQVMNYSRQHQYPLQCIME 136 IAE K QV ++R HQ+PL C +E Sbjct: 106 IAETKSAQVNQFARDHQHPLLCEIE 130 >gi|88812888|ref|ZP_01128132.1| ATP-dependent Clp protease adaptor protein ClpS [Nitrococcus mobilis Nb-231] gi|88789810|gb|EAR20933.1| ATP-dependent Clp protease adaptor protein ClpS [Nitrococcus mobilis Nb-231] Length = 106 Score = 96.7 bits (239), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 45/86 (52%), Positives = 61/86 (70%) Query: 51 SSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAY 110 +V+ P LYRV+L+ND+YTPMEFV+ VLQ FF+ D A IML VH +G G CGVY Sbjct: 19 EPQVKRPPLYRVVLLNDDYTPMEFVVEVLQIFFHMDRGKATQIMLHVHTRGKGVCGVYNR 78 Query: 111 EIAEMKVNQVMNYSRQHQYPLQCIME 136 ++AE KV+ V ++R++ +PL C ME Sbjct: 79 DVAETKVDLVNEHARKNDHPLMCTME 104 >gi|50121581|ref|YP_050748.1| ATP-dependent Clp protease adaptor protein ClpS [Pectobacterium atrosepticum SCRI1043] gi|67460269|sp|Q6D3T7|CLPS_ERWCT RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|49612107|emb|CAG75557.1| conserved hypothetical protein [Pectobacterium atrosepticum SCRI1043] Length = 106 Score = 96.7 bits (239), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 45/85 (52%), Positives = 61/85 (71%) Query: 53 KVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEI 112 K++ P +Y V+L ND+YTPMEFVI VLQ FF D E A +ML VH+QG CGV++ E+ Sbjct: 21 KLQPPSMYNVVLNNDDYTPMEFVIDVLQKFFSYDIERATQLMLTVHYQGKAICGVFSAEV 80 Query: 113 AEMKVNQVMNYSRQHQYPLQCIMEQ 137 AE KV QV Y+R+++ PL C +E+ Sbjct: 81 AETKVVQVNRYARENEQPLLCTLEK 105 >gi|262372530|ref|ZP_06065809.1| substrate modulator for ClpAP [Acinetobacter junii SH205] gi|262312555|gb|EEY93640.1| substrate modulator for ClpAP [Acinetobacter junii SH205] Length = 136 Score = 96.7 bits (239), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 43/88 (48%), Positives = 61/88 (69%) Query: 51 SSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAY 110 +++ P LY V+L+ND+YTPM+FVI +LQ++F D + A +ML VH++G G GVY Sbjct: 48 PPELKRPPLYAVVLLNDDYTPMDFVIEILQSYFGMDFDQASQVMLTVHYEGKGTAGVYPR 107 Query: 111 EIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 +IAE K NQV NY+R +PL C +E K Sbjct: 108 DIAETKANQVNNYARSQGHPLLCQIEPK 135 >gi|21242744|ref|NP_642326.1| ATP-dependent Clp protease adaptor protein ClpS [Xanthomonas axonopodis pv. citri str. 306] gi|84624070|ref|YP_451442.1| ATP-dependent Clp protease adaptor protein ClpS [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|289666027|ref|ZP_06487608.1| ATP-dependent Clp protease adaptor protein ClpS [Xanthomonas campestris pv. vasculorum NCPPB702] gi|289670485|ref|ZP_06491560.1| ATP-dependent Clp protease adaptor protein ClpS [Xanthomonas campestris pv. musacearum NCPPB4381] gi|294625258|ref|ZP_06703897.1| ATP-dependent Clp protease adaptor protein ClpS [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|294666594|ref|ZP_06731833.1| ATP-dependent Clp protease adaptor protein ClpS [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|24638421|sp|Q8PL06|CLPS_XANAC RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|67460158|sp|Q5GZR3|CLPS_XANOR RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|123521875|sp|Q2P2Q9|CLPS_XANOM RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|21108222|gb|AAM36862.1| conserved hypothetical protein [Xanthomonas axonopodis pv. citri str. 306] gi|84368010|dbj|BAE69168.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|292600432|gb|EFF44530.1| ATP-dependent Clp protease adaptor protein ClpS [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292603614|gb|EFF47026.1| ATP-dependent Clp protease adaptor protein ClpS [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 106 Score = 96.3 bits (238), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 52/106 (49%), Positives = 68/106 (64%), Gaps = 1/106 (0%) Query: 32 MNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAK 91 M + E D+ L E +V P Y+VLL+ND+YTPM+FV+ VL+ FF + E A Sbjct: 1 MPRNTSHEHDHGLMVEAS-KPEVAPPPRYQVLLLNDDYTPMDFVVTVLEQFFNLNLEQAT 59 Query: 92 CIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 IML VH +G G CGVY+ E+AE KV QV +SR +Q+PL C MEQ Sbjct: 60 QIMLHVHTRGRGVCGVYSREVAESKVAQVNEFSRMNQHPLLCTMEQ 105 >gi|310767160|gb|ADP12110.1| ATP-dependent Clp protease adaptor protein ClpS [Erwinia sp. Ejp617] Length = 106 Score = 96.3 bits (238), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 46/98 (46%), Positives = 65/98 (66%), Gaps = 2/98 (2%) Query: 40 FDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHH 99 F+ D +VR ++ P +Y+V+L ND++TPMEFVI VLQ FF D E A +ML VH+ Sbjct: 10 FEQLADDKVR--EALKPPSMYKVILNNDDFTPMEFVIDVLQKFFSYDIERATQLMLTVHY 67 Query: 100 QGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 QG CGV+ E+AE KV V Y+R +++PL C +E+ Sbjct: 68 QGKAICGVFTAEVAETKVAHVNKYARDNEHPLLCTLEK 105 >gi|90415922|ref|ZP_01223855.1| hypothetical protein GB2207_01777 [marine gamma proteobacterium HTCC2207] gi|90332296|gb|EAS47493.1| hypothetical protein GB2207_01777 [marine gamma proteobacterium HTCC2207] Length = 114 Score = 96.3 bits (238), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 41/85 (48%), Positives = 58/85 (68%) Query: 52 SKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYE 111 K++ P +++V+L+ND+YTPMEFV+ +L+ FF K E A IML +H G G CG+Y + Sbjct: 23 PKLKKPSMFKVVLLNDDYTPMEFVVELLEKFFSKTRENATRIMLSIHTDGKGVCGIYTKD 82 Query: 112 IAEMKVNQVMNYSRQHQYPLQCIME 136 +AE K V YSR HQ+PL C +E Sbjct: 83 VAETKAGTVNQYSRDHQHPLLCEVE 107 >gi|238757595|ref|ZP_04618779.1| ATP-dependent Clp protease adapter protein clpS [Yersinia aldovae ATCC 35236] gi|238704100|gb|EEP96633.1| ATP-dependent Clp protease adapter protein clpS [Yersinia aldovae ATCC 35236] Length = 106 Score = 96.3 bits (238), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 43/89 (48%), Positives = 62/89 (69%) Query: 49 RFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVY 108 ++ ++ P +Y+V+L ND+YTPMEFVI VLQ FF D E A +ML VH+QG CGV+ Sbjct: 17 KYKEALKPPSMYKVILNNDDYTPMEFVIDVLQKFFSYDIERATQLMLNVHYQGKAICGVF 76 Query: 109 AYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 E+AE KV V Y+R++++PL C +E+ Sbjct: 77 TAEVAETKVAHVNQYARENEHPLLCTLEK 105 >gi|171058346|ref|YP_001790695.1| ATP-dependent Clp protease adaptor protein ClpS [Leptothrix cholodnii SP-6] gi|238689087|sp|B1XY29|CLPS_LEPCP RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|170775791|gb|ACB33930.1| ATP-dependent Clp protease adaptor protein ClpS [Leptothrix cholodnii SP-6] Length = 115 Score = 96.3 bits (238), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 42/84 (50%), Positives = 59/84 (70%) Query: 53 KVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEI 112 +V P++Y+V+++ND++TPMEFV+ VLQ FF D E A IMLK+HH+G CGVY ++ Sbjct: 30 RVEPPRVYQVVMLNDDFTPMEFVVMVLQQFFRHDLEAATQIMLKIHHEGRAVCGVYTQDV 89 Query: 113 AEMKVNQVMNYSRQHQYPLQCIME 136 A KV V +R+ +PLQC ME Sbjct: 90 AATKVEMVQAAARRAGHPLQCTME 113 >gi|298530330|ref|ZP_07017732.1| ATP-dependent Clp protease adaptor protein ClpS [Desulfonatronospira thiodismutans ASO3-1] gi|298509704|gb|EFI33608.1| ATP-dependent Clp protease adaptor protein ClpS [Desulfonatronospira thiodismutans ASO3-1] Length = 104 Score = 96.3 bits (238), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 47/100 (47%), Positives = 62/100 (62%), Gaps = 1/100 (1%) Query: 39 EFDNCLDSEVRFSSK-VRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKV 97 E L S S + ++ P+ Y+VLL ND+YT MEFV+HVLQ F+K A IML V Sbjct: 4 ELTGTLPSPGTVSEEEIKEPQRYKVLLHNDDYTTMEFVVHVLQKVFHKTESEAMHIMLSV 63 Query: 98 HHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 H G G CG+Y E+AE KV V + +R+ YPL+C ME+ Sbjct: 64 HKNGTGVCGIYTGEVAETKVAMVTSMARKKGYPLKCTMEE 103 >gi|242279301|ref|YP_002991430.1| ATP-dependent Clp protease adaptor protein ClpS [Desulfovibrio salexigens DSM 2638] gi|242122195|gb|ACS79891.1| ATP-dependent Clp protease adaptor protein ClpS [Desulfovibrio salexigens DSM 2638] Length = 102 Score = 96.3 bits (238), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 44/101 (43%), Positives = 66/101 (65%) Query: 37 IAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLK 96 +AE+ +S+V +++ P+ +RVLL ND+YT MEFV+ VL F K E + IML+ Sbjct: 1 MAEYKENFESDVLLEDELKEPRKFRVLLHNDDYTSMEFVVAVLMQVFRKTEEESTKIMLQ 60 Query: 97 VHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 VH+ G+G CGVY E+AE +V V ++Q YPL+C +E+ Sbjct: 61 VHNDGVGVCGVYTAEVAETRVEMVKQLAQQAGYPLKCTIEE 101 >gi|119470167|ref|ZP_01612933.1| modulator of ClpA substrate specificity [Alteromonadales bacterium TW-7] gi|119446588|gb|EAW27862.1| modulator of ClpA substrate specificity [Alteromonadales bacterium TW-7] Length = 105 Score = 96.3 bits (238), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 50/109 (45%), Positives = 69/109 (63%), Gaps = 5/109 (4%) Query: 30 SRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHET 89 S M G+ D DSE K++ P+ Y+V+L ND+YTPM+FVI VL FF D + Sbjct: 2 SGMKDSGV--IDTVRDSE---KQKLQPPRKYKVVLNNDDYTPMDFVIEVLTTFFNMDSDR 56 Query: 90 AKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 A +ML+VH +G G CGVY+ ++A KV QV YSR +++PL C EQ+ Sbjct: 57 ATDVMLQVHEKGKGICGVYSADVAYTKVEQVNRYSRDNEHPLLCSCEQE 105 >gi|307130779|ref|YP_003882795.1| regulatory protein for ClpA substrate specificity [Dickeya dadantii 3937] gi|306528308|gb|ADM98238.1| regulatory protein for ClpA substrate specificity [Dickeya dadantii 3937] Length = 106 Score = 96.3 bits (238), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 44/87 (50%), Positives = 62/87 (71%) Query: 51 SSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAY 110 + ++ P +Y+V+L ND+YTPMEFVI VLQ FF D E A +ML VH+ G CGVY+ Sbjct: 19 AEALQPPSMYKVILNNDDYTPMEFVIDVLQKFFSYDIERATQLMLTVHYHGKAICGVYSA 78 Query: 111 EIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 E+AE KV QV Y+R++++PL C +E+ Sbjct: 79 EVAETKVAQVNRYARENEHPLLCTLEK 105 >gi|292487808|ref|YP_003530683.1| ATP-dependent Clp protease adaptor protein ClpS [Erwinia amylovora CFBP1430] gi|292899037|ref|YP_003538406.1| ATP-dependent Clp protease adaptor protein [Erwinia amylovora ATCC 49946] gi|291198885|emb|CBJ45995.1| ATP-dependent Clp protease adaptor protein [Erwinia amylovora ATCC 49946] gi|291553230|emb|CBA20275.1| ATP-dependent Clp protease adaptor protein ClpS [Erwinia amylovora CFBP1430] gi|312171926|emb|CBX80183.1| ATP-dependent Clp protease adaptor protein ClpS [Erwinia amylovora ATCC BAA-2158] Length = 106 Score = 96.3 bits (238), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 44/92 (47%), Positives = 63/92 (68%) Query: 46 SEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGEC 105 +E + +++ P +Y+VLL ND++TPMEFVI VLQ FF D E A +ML VH+QG C Sbjct: 14 AEDKVREELKPPSMYKVLLNNDDFTPMEFVIDVLQKFFSYDIERATQLMLTVHYQGKAIC 73 Query: 106 GVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 GV+ E+AE KV V Y+R +++PL C +E+ Sbjct: 74 GVFTAEVAETKVAHVNKYARDNEHPLLCTLEK 105 >gi|254524583|ref|ZP_05136638.1| ATP-dependent Clp protease adaptor protein ClpS [Stenotrophomonas sp. SKA14] gi|219722174|gb|EED40699.1| ATP-dependent Clp protease adaptor protein ClpS [Stenotrophomonas sp. SKA14] Length = 85 Score = 96.3 bits (238), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 44/81 (54%), Positives = 58/81 (71%) Query: 57 PKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMK 116 P Y+V+L+ND+YTPM+FV+ VLQ FF D + A +ML VH +G G CGV+ E+AE K Sbjct: 4 PPFYQVMLLNDDYTPMDFVVDVLQQFFSMDLDKATQVMLHVHTRGRGVCGVFTREVAETK 63 Query: 117 VNQVMNYSRQHQYPLQCIMEQ 137 V QV YSR +Q+PL C ME+ Sbjct: 64 VAQVNEYSRMNQHPLLCTMEK 84 >gi|332035126|gb|EGI71639.1| ATP-dependent Clp protease adaptor protein ClpS [Pseudoalteromonas haloplanktis ANT/505] Length = 102 Score = 95.9 bits (237), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 49/107 (45%), Positives = 68/107 (63%), Gaps = 5/107 (4%) Query: 32 MNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAK 91 M G+ D DSE K++ P+ Y+V+L ND+YTPM+FVI VL FF D + A Sbjct: 1 MKDSGV--IDTVRDSE---KQKLQPPRKYKVVLNNDDYTPMDFVIEVLTTFFNMDSDRAT 55 Query: 92 CIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 +ML+VH +G G CGVY+ ++A KV QV YSR +++PL C EQ+ Sbjct: 56 DVMLQVHEKGKGICGVYSADVAHTKVEQVNRYSRDNEHPLLCSCEQE 102 >gi|119775192|ref|YP_927932.1| ATP-dependent Clp protease adaptor protein ClpS [Shewanella amazonensis SB2B] gi|166214742|sp|A1S7A6|CLPS_SHEAM RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|119767692|gb|ABM00263.1| conserved hypothetical protein [Shewanella amazonensis SB2B] Length = 102 Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 43/89 (48%), Positives = 63/89 (70%) Query: 49 RFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVY 108 R +++ P +Y+V+L ND+YTPM+FV+ VLQ FF + A IML++HHQG CGV+ Sbjct: 13 RADTELMPPSMYKVILNNDDYTPMDFVVEVLQLFFKMNEHQATEIMLQIHHQGKAVCGVF 72 Query: 109 AYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 + IAE KV QV ++RQ+Q+PL C +E+ Sbjct: 73 PFGIAETKVAQVNQFARQNQHPLLCSLEK 101 >gi|78047604|ref|YP_363779.1| ATP-dependent Clp protease adaptor protein ClpS [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|78036034|emb|CAJ23725.1| ATP-dependent Clp protease adaptor protein ClpS [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 128 Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 47/86 (54%), Positives = 61/86 (70%) Query: 52 SKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYE 111 +V P Y+VLL+ND+YTPM+FV+ VL+ FF + E A IML VH +G G CGVY+ E Sbjct: 42 PEVAPPPRYQVLLLNDDYTPMDFVVTVLEQFFNLNLEQATQIMLHVHTRGRGVCGVYSRE 101 Query: 112 IAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +AE KV QV +SR +Q+PL C MEQ Sbjct: 102 VAESKVAQVNEFSRMNQHPLLCTMEQ 127 >gi|15805613|ref|NP_294309.1| ATP-dependent Clp protease adaptor protein ClpS [Deinococcus radiodurans R1] gi|6458284|gb|AAF10166.1|AE001917_3 conserved hypothetical protein [Deinococcus radiodurans R1] Length = 139 Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 39/87 (44%), Positives = 63/87 (72%) Query: 52 SKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYE 111 ++ + P+L+RVLL+ND+YTPM++V+ VL+ FF K + A+ IML VHH+G G GVY + Sbjct: 49 TETKKPRLWRVLLLNDDYTPMDYVVQVLEQFFRKTEQEAELIMLAVHHKGQGVAGVYTRD 108 Query: 112 IAEMKVNQVMNYSRQHQYPLQCIMEQK 138 +AE KV QV ++++ +PL+ + E + Sbjct: 109 VAETKVAQVTAHAQREGHPLRVVAEPE 135 >gi|197284584|ref|YP_002150456.1| ATP-dependent Clp protease adaptor protein [Proteus mirabilis HI4320] gi|227356766|ref|ZP_03841151.1| ATP-dependent Clp protease adaptor protein [Proteus mirabilis ATCC 29906] gi|194682071|emb|CAR41609.1| ATP-dependent Clp protease adaptor protein [Proteus mirabilis HI4320] gi|227163056|gb|EEI47991.1| ATP-dependent Clp protease adaptor protein [Proteus mirabilis ATCC 29906] Length = 104 Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 45/96 (46%), Positives = 64/96 (66%), Gaps = 4/96 (4%) Query: 46 SEVRFSSKV----RVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQG 101 +E KV P +Y+V+L ND+YTPM+FV+ VL +F+ + E A IML VHH+G Sbjct: 8 TETTLGEKVSQLNEPPAMYKVILNNDDYTPMDFVVEVLTMYFFLNEEKATQIMLDVHHKG 67 Query: 102 IGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 G CGVY+ +IAE KV QV Y+R++ +PL C +E+ Sbjct: 68 KGVCGVYSADIAETKVAQVNQYARENGHPLLCTLEK 103 >gi|262402498|ref|ZP_06079059.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio sp. RC586] gi|262351280|gb|EEZ00413.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio sp. RC586] Length = 106 Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 43/86 (50%), Positives = 60/86 (69%) Query: 52 SKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYE 111 + V+ P +Y V+L ND+YT M+FVI +L+ FF D E A +MLKVH++G CG + E Sbjct: 20 TAVKPPSMYHVVLNNDDYTSMDFVIEILERFFSMDIERATQVMLKVHYEGKAICGTFTAE 79 Query: 112 IAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +AE KV QV YSR++++PL C MEQ Sbjct: 80 VAETKVAQVTMYSRENEHPLLCTMEQ 105 >gi|319787138|ref|YP_004146613.1| ATP-dependent Clp protease adaptor protein ClpS [Pseudoxanthomonas suwonensis 11-1] gi|317465650|gb|ADV27382.1| ATP-dependent Clp protease adaptor protein ClpS [Pseudoxanthomonas suwonensis 11-1] Length = 108 Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 44/86 (51%), Positives = 61/86 (70%) Query: 52 SKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYE 111 ++ P +Y+V+L+ND+YTPM+FV+ VLQ FF D E A +ML VH +G G CGV+ E Sbjct: 22 PEIAPPPMYQVILLNDDYTPMDFVVAVLQQFFGLDLERATQVMLHVHTRGRGVCGVFTRE 81 Query: 112 IAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +AE KV QV +SR +Q+PL C ME+ Sbjct: 82 VAESKVAQVNEFSRMNQHPLLCTMEK 107 >gi|307545652|ref|YP_003898131.1| ATP-dependent Clp protease adaptor protein ClpS [Halomonas elongata DSM 2581] gi|307217676|emb|CBV42946.1| ATP-dependent Clp protease adaptor protein ClpS [Halomonas elongata DSM 2581] Length = 121 Score = 95.5 bits (236), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 50/113 (44%), Positives = 69/113 (61%), Gaps = 3/113 (2%) Query: 27 MADSRMNKKGIAEFDNCLDSEVRFSS---KVRVPKLYRVLLVNDNYTPMEFVIHVLQNFF 83 +A R E D D +V S ++ P +Y+V+L ND++TPMEFV+ VLQ FF Sbjct: 5 LAPYRAGMTRPPEPDEEGDGDVAVQSSEPELAHPPMYKVVLHNDDFTPMEFVVEVLQTFF 64 Query: 84 YKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIME 136 + D ETA IML VH QG CG++ +IAE K +QV Y+R+ Q+PL C +E Sbjct: 65 HMDSETAVQIMLAVHTQGKATCGIFTRDIAETKSHQVNQYARECQHPLLCDIE 117 >gi|94987059|ref|YP_594992.1| hypothetical protein LI0617 [Lawsonia intracellularis PHE/MN1-00] gi|229889821|sp|Q1MQQ6|CLPS_LAWIP RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|94731308|emb|CAJ54671.1| uncharacterized conserved protein [Lawsonia intracellularis PHE/MN1-00] Length = 109 Score = 95.5 bits (236), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 44/93 (47%), Positives = 59/93 (63%) Query: 45 DSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGE 104 E+ K+R PK+Y+VLL NDNYT MEFV+ +L F K E A IML VH +GIG Sbjct: 14 SPELLLQEKIRRPKMYQVLLHNDNYTTMEFVVSILMKIFRKTMEQATSIMLSVHRKGIGV 73 Query: 105 CGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 GVY E+AE KVN +R+ +PL+C +++ Sbjct: 74 AGVYTRELAETKVNTTHMLAREAGFPLRCTLQE 106 >gi|320335153|ref|YP_004171864.1| ATP-dependent Clp protease adapter protein clpS [Deinococcus maricopensis DSM 21211] gi|319756442|gb|ADV68199.1| ATP-dependent Clp protease adapter protein clpS [Deinococcus maricopensis DSM 21211] Length = 114 Score = 95.5 bits (236), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 43/98 (43%), Positives = 63/98 (64%) Query: 41 DNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQ 100 D+ +++ ++ P+ Y VLL+ND+YTPM+FV++VL++ F +D A IML VHHQ Sbjct: 9 DSGAGTQLAQRPRLARPRRYTVLLLNDDYTPMDFVVYVLEHHFGRDEPDATRIMLAVHHQ 68 Query: 101 GIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 G G GVY E+AE KV QV +R YPL+ + E + Sbjct: 69 GRGVAGVYTREVAETKVAQVTRLARAQGYPLELLAEPE 106 >gi|85713420|ref|ZP_01044415.1| ATP-dependent Clp protease adaptor protein ClpS [Idiomarina baltica OS145] gi|85692756|gb|EAQ30759.1| ATP-dependent Clp protease adaptor protein ClpS [Idiomarina baltica OS145] Length = 104 Score = 95.5 bits (236), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 48/104 (46%), Positives = 71/104 (68%), Gaps = 2/104 (1%) Query: 37 IAEFDN--CLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIM 94 +++FD+ D E +++ P +Y+V+L ND+YTPM+FVI VL FF ++E A M Sbjct: 1 MSQFDHQHVYDVEEESKHELKPPSMYKVILNNDDYTPMDFVIEVLIRFFRMNNERATDTM 60 Query: 95 LKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 L+VH++G CGVY+ EIAE KV QV Y+R++Q+PL C ME + Sbjct: 61 LQVHYKGKAVCGVYSAEIAETKVVQVNQYARENQHPLLCTMEHE 104 >gi|77919855|ref|YP_357670.1| ATP-dependent Clp protease adaptor protein ClpS [Pelobacter carbinolicus DSM 2380] gi|77545938|gb|ABA89500.1| ATP-dependent Clp protease adaptor protein ClpS [Pelobacter carbinolicus DSM 2380] Length = 104 Score = 95.5 bits (236), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 42/91 (46%), Positives = 62/91 (68%) Query: 47 EVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECG 106 E R +++ P L+RVL+ ND+YT MEFV+ VLQ F+K A IML +H++G G+CG Sbjct: 13 EERKATRTAPPPLFRVLMHNDDYTTMEFVVEVLQGVFHKSAAEAHRIMLNIHNEGTGQCG 72 Query: 107 VYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 + +EIAE KV +V +RQ +PL+C +E+ Sbjct: 73 TFPHEIAETKVARVHQVARQAGFPLRCSLEE 103 >gi|317491428|ref|ZP_07949864.1| ATP-dependent Clp protease adaptor protein ClpS [Enterobacteriaceae bacterium 9_2_54FAA] gi|316920975|gb|EFV42298.1| ATP-dependent Clp protease adaptor protein ClpS [Enterobacteriaceae bacterium 9_2_54FAA] Length = 107 Score = 95.5 bits (236), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 47/105 (44%), Positives = 68/105 (64%), Gaps = 2/105 (1%) Query: 33 NKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKC 92 N+ F+ DS + +V+ P +Y+V+L ND+YTPMEFVI VLQ FF D E A Sbjct: 3 NQNDWLNFEQLADS--KQIDEVKPPSMYKVILNNDDYTPMEFVIDVLQKFFSYDIERATQ 60 Query: 93 IMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +ML VH++G CGV+ E+AE KV V Y+R++++PL C +E+ Sbjct: 61 LMLTVHYKGKAICGVFTAEVAETKVAHVNRYARENEHPLLCTLEK 105 >gi|78357143|ref|YP_388592.1| ATP-dependent Clp protease adaptor protein ClpS [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|123552230|sp|Q30ZJ9|CLPS_DESDG RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|78219548|gb|ABB38897.1| ATP-dependent clp protease adaptor protein ClpS [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 104 Score = 95.5 bits (236), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 44/93 (47%), Positives = 61/93 (65%) Query: 45 DSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGE 104 D++V +++ P+ +RVLL ND+YT M+FV+ VL + F K E A IML VH +GIG Sbjct: 11 DADVLLEEELKEPRRFRVLLHNDDYTSMDFVVAVLIDIFRKSREQAMSIMLSVHEKGIGV 70 Query: 105 CGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 CGVY E+AE KV V +R +PL+C ME+ Sbjct: 71 CGVYTAEVAETKVAMVHARARAEGFPLRCSMEE 103 >gi|294636953|ref|ZP_06715277.1| ATP-dependent Clp protease adaptor protein ClpS [Edwardsiella tarda ATCC 23685] gi|291089846|gb|EFE22407.1| ATP-dependent Clp protease adaptor protein ClpS [Edwardsiella tarda ATCC 23685] Length = 106 Score = 95.5 bits (236), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 44/92 (47%), Positives = 61/92 (66%) Query: 46 SEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGEC 105 ++ R V+ P LY V+L ND+YTPMEFVI VLQ FF D E A +ML VH++G C Sbjct: 14 ADERTREAVKPPSLYSVILNNDDYTPMEFVIEVLQKFFTYDIERATQLMLTVHYKGKAVC 73 Query: 106 GVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 GV+ E+AE KV + Y+R++ +PL C +E+ Sbjct: 74 GVFTAEVAETKVALINRYARENDHPLLCTLEK 105 >gi|269139553|ref|YP_003296254.1| ATP-dependent Clp protease adaptor protein [Edwardsiella tarda EIB202] gi|267985214|gb|ACY85043.1| ATP-dependent Clp protease adaptor protein [Edwardsiella tarda EIB202] gi|304559441|gb|ADM42105.1| ATP-dependent Clp protease adaptor protein ClpS [Edwardsiella tarda FL6-60] Length = 106 Score = 95.1 bits (235), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 45/91 (49%), Positives = 60/91 (65%) Query: 47 EVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECG 106 E R V+ P LY V+L ND+YTPMEFVI VLQ FF D E A +ML VH++G CG Sbjct: 15 EDRTRRAVKPPSLYSVILNNDDYTPMEFVIEVLQKFFAYDIERATQLMLTVHYKGKAVCG 74 Query: 107 VYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 V+ E+AE KV + Y+R +++PL C +E+ Sbjct: 75 VFTAEVAETKVALINRYARDNEHPLLCTLEK 105 >gi|253990327|ref|YP_003041683.1| ATP-dependent Clp protease adaptor protein ClpS [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253781777|emb|CAQ84940.1| atp-dependent clp protease adaptor protein clps [Photorhabdus asymbiotica] Length = 106 Score = 95.1 bits (235), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 44/85 (51%), Positives = 60/85 (70%) Query: 53 KVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEI 112 K++ P +Y+V+L ND+YTPMEFV+ VL+ FF D E A +ML VH+QG CGVY E+ Sbjct: 21 KLQPPSMYQVILNNDDYTPMEFVVDVLRKFFSYDVERATQLMLDVHYQGKAVCGVYTAEV 80 Query: 113 AEMKVNQVMNYSRQHQYPLQCIMEQ 137 AE K QV Y+R+ Q+PL C +E+ Sbjct: 81 AETKAAQVNMYAREQQHPLLCTLEK 105 >gi|312881479|ref|ZP_07741271.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio caribbenthicus ATCC BAA-2122] gi|309370845|gb|EFP98305.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio caribbenthicus ATCC BAA-2122] Length = 106 Score = 95.1 bits (235), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 42/86 (48%), Positives = 61/86 (70%) Query: 52 SKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYE 111 +KV P +Y V+L ND+YTPMEFVI +L+ FF D + A +MLKVH++G CG + E Sbjct: 20 TKVTPPSMYNVILNNDDYTPMEFVIEILERFFSMDIDKATQVMLKVHYEGKAICGTFTAE 79 Query: 112 IAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +AE KV QV +S+++++PL C ME+ Sbjct: 80 VAETKVAQVTLHSKENEHPLLCTMER 105 >gi|157369916|ref|YP_001477905.1| ATP-dependent Clp protease adaptor protein ClpS [Serratia proteamaculans 568] gi|270261165|ref|ZP_06189438.1| ATP-dependent Clp protease adapter protein ClpS [Serratia odorifera 4Rx13] gi|293396848|ref|ZP_06641122.1| ATP-dependent Clp protease adaptor protein ClpS [Serratia odorifera DSM 4582] gi|167008656|sp|A8GCD7|CLPS_SERP5 RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|157321680|gb|ABV40777.1| ATP-dependent Clp protease adaptor protein ClpS [Serratia proteamaculans 568] gi|270044649|gb|EFA17740.1| ATP-dependent Clp protease adapter protein ClpS [Serratia odorifera 4Rx13] gi|291420319|gb|EFE93574.1| ATP-dependent Clp protease adaptor protein ClpS [Serratia odorifera DSM 4582] Length = 106 Score = 95.1 bits (235), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 44/84 (52%), Positives = 60/84 (71%) Query: 54 VRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIA 113 V+ P +Y+V+L ND+YTPMEFVI VLQ FF D E A +ML VH+QG CGV+ E+A Sbjct: 22 VKPPSMYKVILNNDDYTPMEFVIDVLQKFFSYDIERATQLMLTVHYQGKAICGVFTAEVA 81 Query: 114 EMKVNQVMNYSRQHQYPLQCIMEQ 137 E KV V Y+R++++PL C +E+ Sbjct: 82 ETKVVHVNRYARENEHPLLCTLEK 105 >gi|322832165|ref|YP_004212192.1| ATP-dependent Clp protease adaptor protein ClpS [Rahnella sp. Y9602] gi|321167366|gb|ADW73065.1| ATP-dependent Clp protease adaptor protein ClpS [Rahnella sp. Y9602] Length = 106 Score = 95.1 bits (235), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 43/86 (50%), Positives = 62/86 (72%) Query: 52 SKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYE 111 +V+ P +Y+V+L ND+YTPMEFVI VLQ FF D E A +ML+VH++G CGVY E Sbjct: 20 DEVKPPSMYKVILNNDDYTPMEFVIDVLQKFFSYDIERATQLMLQVHYRGKAICGVYTAE 79 Query: 112 IAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +AE KV V Y++++++PL C +E+ Sbjct: 80 VAETKVAHVNEYAKENEHPLLCTLEK 105 >gi|12230837|sp|Q9RWS9|CLPS_DEIRA RecName: Full=ATP-dependent Clp protease adapter protein ClpS Length = 113 Score = 95.1 bits (235), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 39/85 (45%), Positives = 62/85 (72%) Query: 52 SKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYE 111 ++ + P+L+RVLL+ND+YTPM++V+ VL+ FF K + A+ IML VHH+G G GVY + Sbjct: 23 TETKKPRLWRVLLLNDDYTPMDYVVQVLEQFFRKTEQEAELIMLAVHHKGQGVAGVYTRD 82 Query: 112 IAEMKVNQVMNYSRQHQYPLQCIME 136 +AE KV QV ++++ +PL+ + E Sbjct: 83 VAETKVAQVTAHAQREGHPLRVVAE 107 >gi|315126397|ref|YP_004068400.1| modulator of ClpA substrate specificity [Pseudoalteromonas sp. SM9913] gi|315014911|gb|ADT68249.1| modulator of ClpA substrate specificity [Pseudoalteromonas sp. SM9913] Length = 102 Score = 94.7 bits (234), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 47/107 (43%), Positives = 67/107 (62%), Gaps = 5/107 (4%) Query: 32 MNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAK 91 M G+ D DSE K++ P+ Y+V+L ND+YTPM+FVI +L FF D + A Sbjct: 1 MKDSGV--IDTVRDSE---KQKLQPPRKYKVVLNNDDYTPMDFVIEILMTFFNMDSDRAT 55 Query: 92 CIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 +ML++H QG G CGVY+ ++A K QV YSR +++PL C EQ+ Sbjct: 56 DVMLQIHQQGKGICGVYSADVAHTKAEQVNRYSRDNEHPLLCSCEQE 102 >gi|320539589|ref|ZP_08039254.1| putative regulatory protein for ClpA substrate specificity [Serratia symbiotica str. Tucson] gi|320030348|gb|EFW12362.1| putative regulatory protein for ClpA substrate specificity [Serratia symbiotica str. Tucson] Length = 106 Score = 94.7 bits (234), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 44/92 (47%), Positives = 64/92 (69%) Query: 46 SEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGEC 105 +E + ++ P +Y+V+L D+YTPMEFVI VLQ FF+ D E A +ML+VH+QG C Sbjct: 14 TEEKQIDALKPPSMYKVILNKDDYTPMEFVIDVLQKFFFYDIERATQLMLRVHYQGKAIC 73 Query: 106 GVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 GV+ E+AE KV V Y+R+++YPL C +E+ Sbjct: 74 GVFTAEVAETKVIHVNCYARENEYPLLCTLEK 105 >gi|262376116|ref|ZP_06069346.1| substrate modulator for ClpAP [Acinetobacter lwoffii SH145] gi|262308717|gb|EEY89850.1| substrate modulator for ClpAP [Acinetobacter lwoffii SH145] Length = 137 Score = 94.7 bits (234), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 43/88 (48%), Positives = 60/88 (68%) Query: 51 SSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAY 110 +++ P LY V+L+ND+YTPMEFVI +LQ +F + + A +ML VH++G G GVY Sbjct: 49 PPELKRPPLYAVVLLNDDYTPMEFVIEILQQYFAMNLDQATQVMLTVHYEGKGVAGVYPR 108 Query: 111 EIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 +IAE K NQV NY+R +PL C +E K Sbjct: 109 DIAETKANQVNNYARSQGHPLLCQIEPK 136 >gi|259908937|ref|YP_002649293.1| ATP-dependent Clp protease adaptor protein ClpS [Erwinia pyrifoliae Ep1/96] gi|224964559|emb|CAX56072.1| ATP-dependent Clp protease adaptor protein [Erwinia pyrifoliae Ep1/96] gi|283478941|emb|CAY74857.1| ATP-dependent Clp protease adaptor protein ClpS [Erwinia pyrifoliae DSM 12163] Length = 106 Score = 94.7 bits (234), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 45/98 (45%), Positives = 65/98 (66%), Gaps = 2/98 (2%) Query: 40 FDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHH 99 F+ + +VR ++ P +Y+V+L ND++TPMEFVI VLQ FF D E A +ML VH+ Sbjct: 10 FEQLANDKVR--EALKPPSMYKVILNNDDFTPMEFVIDVLQKFFSYDIERATQLMLTVHY 67 Query: 100 QGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 QG CGV+ E+AE KV V Y+R +++PL C +E+ Sbjct: 68 QGKAVCGVFTAEVAETKVAHVNKYARDNEHPLLCTLEK 105 >gi|238792421|ref|ZP_04636055.1| ATP-dependent Clp protease adapter protein clpS [Yersinia intermedia ATCC 29909] gi|238728347|gb|EEQ19867.1| ATP-dependent Clp protease adapter protein clpS [Yersinia intermedia ATCC 29909] Length = 106 Score = 94.7 bits (234), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 43/84 (51%), Positives = 60/84 (71%) Query: 54 VRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIA 113 ++ P +Y+V+L ND+YTPMEFVI VLQ FF D E A +ML VH+QG CGV+ E+A Sbjct: 22 LKPPSMYKVILNNDDYTPMEFVIDVLQKFFSYDIERATQLMLNVHYQGKAICGVFTAEVA 81 Query: 114 EMKVNQVMNYSRQHQYPLQCIMEQ 137 E KV V Y+R++++PL C +E+ Sbjct: 82 ETKVAHVNQYARENEHPLLCTLEK 105 >gi|238784507|ref|ZP_04628515.1| ATP-dependent Clp protease adapter protein clpS [Yersinia bercovieri ATCC 43970] gi|238795830|ref|ZP_04639343.1| ATP-dependent Clp protease adapter protein clpS [Yersinia mollaretii ATCC 43969] gi|238714570|gb|EEQ06574.1| ATP-dependent Clp protease adapter protein clpS [Yersinia bercovieri ATCC 43970] gi|238720293|gb|EEQ12096.1| ATP-dependent Clp protease adapter protein clpS [Yersinia mollaretii ATCC 43969] Length = 106 Score = 94.7 bits (234), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 43/84 (51%), Positives = 60/84 (71%) Query: 54 VRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIA 113 ++ P +Y+V+L ND+YTPMEFVI VLQ FF D E A +ML VH+QG CGV+ E+A Sbjct: 22 LKPPSMYKVILNNDDYTPMEFVIDVLQKFFSYDIERATQLMLNVHYQGKAICGVFTAEVA 81 Query: 114 EMKVNQVMNYSRQHQYPLQCIMEQ 137 E KV V Y+R++++PL C +E+ Sbjct: 82 ETKVAHVNQYARENEHPLLCTLEK 105 >gi|332162228|ref|YP_004298805.1| ATP-dependent Clp protease adaptor protein ClpS [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|318606291|emb|CBY27789.1| ATP-dependent Clp protease adaptor protein ClpS [Yersinia enterocolitica subsp. palearctica Y11] gi|325666458|gb|ADZ43102.1| ATP-dependent Clp protease adaptor protein ClpS [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330860566|emb|CBX70865.1| ATP-dependent Clp protease adapter protein clpS [Yersinia enterocolitica W22703] Length = 115 Score = 94.7 bits (234), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 43/84 (51%), Positives = 60/84 (71%) Query: 54 VRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIA 113 ++ P +Y+V+L ND+YTPMEFVI VLQ FF D E A +ML VH+QG CGV+ E+A Sbjct: 31 LKPPSMYKVILNNDDYTPMEFVIDVLQKFFSYDIERATQLMLNVHYQGKAICGVFTAEVA 90 Query: 114 EMKVNQVMNYSRQHQYPLQCIMEQ 137 E KV V Y+R++++PL C +E+ Sbjct: 91 ETKVAHVNQYARENEHPLLCTLEK 114 >gi|123441829|ref|YP_001005813.1| ATP-dependent Clp protease adaptor protein ClpS [Yersinia enterocolitica subsp. enterocolitica 8081] gi|238762120|ref|ZP_04623093.1| ATP-dependent Clp protease adapter protein clpS [Yersinia kristensenii ATCC 33638] gi|238789631|ref|ZP_04633414.1| ATP-dependent Clp protease adapter protein clpS [Yersinia frederiksenii ATCC 33641] gi|158512680|sp|A1JMC5|CLPS_YERE8 RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|122088790|emb|CAL11596.1| conserved hypothetical protein [Yersinia enterocolitica subsp. enterocolitica 8081] gi|238699848|gb|EEP92592.1| ATP-dependent Clp protease adapter protein clpS [Yersinia kristensenii ATCC 33638] gi|238722184|gb|EEQ13841.1| ATP-dependent Clp protease adapter protein clpS [Yersinia frederiksenii ATCC 33641] Length = 106 Score = 94.7 bits (234), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 43/84 (51%), Positives = 60/84 (71%) Query: 54 VRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIA 113 ++ P +Y+V+L ND+YTPMEFVI VLQ FF D E A +ML VH+QG CGV+ E+A Sbjct: 22 LKPPSMYKVILNNDDYTPMEFVIDVLQKFFSYDIERATQLMLNVHYQGKAICGVFTAEVA 81 Query: 114 EMKVNQVMNYSRQHQYPLQCIMEQ 137 E KV V Y+R++++PL C +E+ Sbjct: 82 ETKVAHVNQYARENEHPLLCTLEK 105 >gi|300722512|ref|YP_003711802.1| modulator of ClpA substrate specificity [Xenorhabdus nematophila ATCC 19061] gi|297629019|emb|CBJ89604.1| modulator of ClpA substrate specificity [Xenorhabdus nematophila ATCC 19061] Length = 106 Score = 94.7 bits (234), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 42/84 (50%), Positives = 60/84 (71%) Query: 54 VRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIA 113 +R P +Y+V+L ND+YTPMEFV+ VLQ FF + E A +ML VH++G CG+Y E+A Sbjct: 22 LRPPSMYQVVLNNDDYTPMEFVVDVLQKFFSYNVERATQLMLDVHYKGKAVCGIYTAEVA 81 Query: 114 EMKVNQVMNYSRQHQYPLQCIMEQ 137 E K QV Y+R+H++PL C +E+ Sbjct: 82 ETKAAQVNMYAREHEHPLLCTLEK 105 >gi|238920382|ref|YP_002933897.1| hypothetical protein NT01EI_2492 [Edwardsiella ictaluri 93-146] gi|259491247|sp|C5BEA1|CLPS_EDWI9 RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|238869951|gb|ACR69662.1| conserved hypothetical protein [Edwardsiella ictaluri 93-146] Length = 106 Score = 94.4 bits (233), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 44/92 (47%), Positives = 61/92 (66%) Query: 46 SEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGEC 105 +E + V+ P LY V+L ND+YTPMEFVI VLQ FF D E A +ML VH++G C Sbjct: 14 AEDQTRRAVKPPSLYSVILNNDDYTPMEFVIEVLQTFFAYDIERATQLMLTVHYKGKAVC 73 Query: 106 GVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 GV+ E+AE KV + Y+R +++PL C +E+ Sbjct: 74 GVFTAEVAETKVALINRYARDNEHPLLCTLEK 105 >gi|291334349|gb|ADD94008.1| hypothetical protein ED21_23138 [uncultured marine bacterium MedDCM-OCT-S11-C310] Length = 112 Score = 94.4 bits (233), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 44/84 (52%), Positives = 60/84 (71%) Query: 53 KVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEI 112 KV+ PK Y+VLL NDNYT MEFV+ VL+ F+ + +A +ML VH +G G GV++YE+ Sbjct: 26 KVKRPKRYKVLLHNDNYTTMEFVVLVLKTVFHLEEPSAVQVMLHVHRKGAGVAGVFSYEV 85 Query: 113 AEMKVNQVMNYSRQHQYPLQCIME 136 AE KV++V +R H YPL+C ME Sbjct: 86 AETKVHKVTELARAHDYPLRCSME 109 >gi|290473958|ref|YP_003466832.1| modulator of ClpA substrate specificity [Xenorhabdus bovienii SS-2004] gi|289173265|emb|CBJ80040.1| modulator of ClpA substrate specificity [Xenorhabdus bovienii SS-2004] Length = 106 Score = 94.4 bits (233), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 46/105 (43%), Positives = 68/105 (64%), Gaps = 4/105 (3%) Query: 37 IAEFDNCLDSEVRFSSK----VRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKC 92 ++EF N L E K ++ P +Y+V+L ND+YTPMEFV+ VL+ FF D E A Sbjct: 1 MSEFYNSLKIEELIEDKTEQTLQPPSMYKVILNNDDYTPMEFVVDVLRKFFSYDVERATQ 60 Query: 93 IMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +ML +H+QG CG+Y E+AE K QV Y+++H++PL C +E+ Sbjct: 61 LMLDIHYQGKAICGIYTAEVAETKAAQVNMYAKEHEHPLLCSLEK 105 >gi|238749793|ref|ZP_04611298.1| ATP-dependent Clp protease adapter protein clpS [Yersinia rohdei ATCC 43380] gi|238712448|gb|EEQ04661.1| ATP-dependent Clp protease adapter protein clpS [Yersinia rohdei ATCC 43380] Length = 106 Score = 94.4 bits (233), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 43/84 (51%), Positives = 60/84 (71%) Query: 54 VRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIA 113 ++ P +Y+V+L ND+YTPMEFVI VLQ FF D E A +ML VH+QG CGV+ E+A Sbjct: 22 LKPPSMYKVILNNDDYTPMEFVIDVLQKFFSYDIERATQLMLNVHYQGKAICGVFTAEVA 81 Query: 114 EMKVNQVMNYSRQHQYPLQCIMEQ 137 E KV V Y+R++++PL C +E+ Sbjct: 82 ETKVAHVNQYARENEHPLLCTLEK 105 >gi|85858021|ref|YP_460223.1| ATP-dependent Clp protease adaptor protein [Syntrophus aciditrophicus SB] gi|123515753|sp|Q2LQK8|CLPS_SYNAS RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|85721112|gb|ABC76055.1| ATP-dependent Clp protease adaptor protein [Syntrophus aciditrophicus SB] Length = 107 Score = 94.4 bits (233), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 47/101 (46%), Positives = 66/101 (65%), Gaps = 2/101 (1%) Query: 37 IAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLK 96 I FD L+ E + KV P++YRV+L ND+YT M+FV+ +L F+K A IML Sbjct: 8 IKNFDQELNIE--WEDKVMEPRMYRVILHNDHYTTMDFVVQILMTIFHKPAAQATRIMLD 65 Query: 97 VHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 VH +G G CGVY Y+IA K+ QV +RQ++YPL+C M++ Sbjct: 66 VHRKGQGVCGVYTYDIASTKIAQVHFMARQNEYPLRCSMDE 106 >gi|258405491|ref|YP_003198233.1| ATP-dependent Clp protease adaptor protein ClpS [Desulfohalobium retbaense DSM 5692] gi|257797718|gb|ACV68655.1| ATP-dependent Clp protease adaptor protein ClpS [Desulfohalobium retbaense DSM 5692] Length = 103 Score = 94.4 bits (233), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 43/86 (50%), Positives = 56/86 (65%) Query: 52 SKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYE 111 + V+ P Y+VLL ND+YT MEFV+ VL + F K A IML VH G+G CG+Y E Sbjct: 17 TAVKEPSRYKVLLHNDDYTTMEFVVQVLMDIFNKSEAEATQIMLNVHKNGVGVCGIYTAE 76 Query: 112 IAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +AE KV V +R+H YPL+C ME+ Sbjct: 77 VAETKVAMVSQMARKHGYPLKCTMEE 102 >gi|71278979|ref|YP_269595.1| ATP-dependent Clp protease adaptor protein ClpS [Colwellia psychrerythraea 34H] gi|123632117|sp|Q480C4|CLPS_COLP3 RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|71144719|gb|AAZ25192.1| ATP-dependent Clp protease adaptor protein ClpS [Colwellia psychrerythraea 34H] Length = 106 Score = 94.4 bits (233), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 43/89 (48%), Positives = 59/89 (66%) Query: 47 EVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECG 106 E ++ P Y V L+ND+YTPM+FV+ VL NFF K E A IML +H++G CG Sbjct: 15 EESVKEQIEEPAKYYVFLLNDDYTPMDFVVDVLCNFFNKSEEQATDIMLTIHYKGKALCG 74 Query: 107 VYAYEIAEMKVNQVMNYSRQHQYPLQCIM 135 Y EIAE KV QV+ Y+ ++Q+PL+C+M Sbjct: 75 TYTAEIAETKVEQVVQYAFENQHPLKCVM 103 >gi|226954273|ref|ZP_03824737.1| protease [Acinetobacter sp. ATCC 27244] gi|294650477|ref|ZP_06727836.1| protease [Acinetobacter haemolyticus ATCC 19194] gi|226835001|gb|EEH67384.1| protease [Acinetobacter sp. ATCC 27244] gi|292823620|gb|EFF82464.1| protease [Acinetobacter haemolyticus ATCC 19194] Length = 130 Score = 94.0 bits (232), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 42/88 (47%), Positives = 61/88 (69%) Query: 51 SSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAY 110 +++ P LY V+L+ND+YTPM+FVI VLQ++F D + A +ML VH++G G G+Y Sbjct: 41 PPELKRPPLYAVVLMNDDYTPMDFVIEVLQSYFGMDFDQASQVMLTVHYEGKGTAGIYPR 100 Query: 111 EIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 +IAE K NQV NY+R +PL C +E + Sbjct: 101 DIAETKANQVNNYARSQGHPLLCQIEPE 128 >gi|284007607|emb|CBA73211.1| ATP-dependent Clp protease adaptor protein [Arsenophonus nasoniae] Length = 89 Score = 94.0 bits (232), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 42/84 (50%), Positives = 59/84 (70%) Query: 54 VRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIA 113 ++ P +Y+V+L ND++TPM+FV+ VL+ +F D E A IML VH G G CGVY E+A Sbjct: 5 LQPPSMYKVILNNDDFTPMDFVVQVLKKYFSFDEEQATQIMLDVHFHGKGICGVYTAEVA 64 Query: 114 EMKVNQVMNYSRQHQYPLQCIMEQ 137 E K QV Y+R+H+YPL C +E+ Sbjct: 65 ETKAAQVNIYAREHEYPLLCTIEE 88 >gi|22126687|ref|NP_670110.1| ATP-dependent Clp protease adaptor protein ClpS [Yersinia pestis KIM 10] gi|45441053|ref|NP_992592.1| ATP-dependent Clp protease adaptor protein ClpS [Yersinia pestis biovar Microtus str. 91001] gi|51595733|ref|YP_069924.1| ATP-dependent Clp protease adaptor protein ClpS [Yersinia pseudotuberculosis IP 32953] gi|108806654|ref|YP_650570.1| ATP-dependent Clp protease adaptor protein ClpS [Yersinia pestis Antiqua] gi|108812774|ref|YP_648541.1| ATP-dependent Clp protease adaptor protein ClpS [Yersinia pestis Nepal516] gi|145599600|ref|YP_001163676.1| ATP-dependent Clp protease adaptor protein ClpS [Yersinia pestis Pestoides F] gi|149366624|ref|ZP_01888658.1| hypothetical protein YPE_1859 [Yersinia pestis CA88-4125] gi|153948682|ref|YP_001401572.1| ATP-dependent Clp protease adaptor protein ClpS [Yersinia pseudotuberculosis IP 31758] gi|162418231|ref|YP_001606105.1| ATP-dependent Clp protease adaptor protein ClpS [Yersinia pestis Angola] gi|165924312|ref|ZP_02220144.1| ATP-dependent Clp protease adaptor protein ClpS [Yersinia pestis biovar Orientalis str. F1991016] gi|165938973|ref|ZP_02227526.1| ATP-dependent Clp protease adaptor protein ClpS [Yersinia pestis biovar Orientalis str. IP275] gi|166009809|ref|ZP_02230707.1| ATP-dependent Clp protease adaptor protein ClpS [Yersinia pestis biovar Antiqua str. E1979001] gi|166211395|ref|ZP_02237430.1| ATP-dependent Clp protease adaptor protein ClpS [Yersinia pestis biovar Antiqua str. B42003004] gi|167399829|ref|ZP_02305347.1| ATP-dependent Clp protease adaptor protein ClpS [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167419808|ref|ZP_02311561.1| ATP-dependent Clp protease adaptor protein ClpS [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167424070|ref|ZP_02315823.1| ATP-dependent Clp protease adaptor protein ClpS [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167469762|ref|ZP_02334466.1| ATP-dependent Clp protease adaptor protein ClpS [Yersinia pestis FV-1] gi|170024918|ref|YP_001721423.1| ATP-dependent Clp protease adaptor protein ClpS [Yersinia pseudotuberculosis YPIII] gi|186894810|ref|YP_001871922.1| ATP-dependent Clp protease adaptor protein ClpS [Yersinia pseudotuberculosis PB1/+] gi|218928515|ref|YP_002346390.1| ATP-dependent Clp protease adaptor protein ClpS [Yersinia pestis CO92] gi|229841334|ref|ZP_04461493.1| regulatory protein for ClpA substrate specificity [Yersinia pestis biovar Orientalis str. PEXU2] gi|229843438|ref|ZP_04463584.1| regulatory protein for ClpA substrate specificity [Yersinia pestis biovar Orientalis str. India 195] gi|229895811|ref|ZP_04510981.1| regulatory protein for ClpA substrate specificity [Yersinia pestis Pestoides A] gi|229903187|ref|ZP_04518300.1| regulatory protein for ClpA substrate specificity [Yersinia pestis Nepal516] gi|270486980|ref|ZP_06204054.1| ATP-dependent Clp protease adaptor protein ClpS [Yersinia pestis KIM D27] gi|294503358|ref|YP_003567420.1| ATP-dependent Clp protease adaptor protein ClpS [Yersinia pestis Z176003] gi|21542306|sp|Q8ZGD5|CLPS_YERPE RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|67460254|sp|Q66CL0|CLPS_YERPS RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|122383658|sp|Q1CA97|CLPS_YERPA RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|122384459|sp|Q1CGD9|CLPS_YERPN RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|158514101|sp|A4TN41|CLPS_YERPP RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|167008657|sp|A7FJZ4|CLPS_YERP3 RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|238687306|sp|A9R4Y5|CLPS_YERPG RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|238688568|sp|B1JRG2|CLPS_YERPY RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|238691444|sp|B2KA00|CLPS_YERPB RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|21959704|gb|AAM86361.1|AE013884_8 hypothetical protein y2810 [Yersinia pestis KIM 10] gi|45435912|gb|AAS61469.1| conserved hypothetical protein [Yersinia pestis biovar Microtus str. 91001] gi|51589015|emb|CAH20633.1| conserved hypothetical protein [Yersinia pseudotuberculosis IP 32953] gi|108776422|gb|ABG18941.1| hypothetical protein YPN_2613 [Yersinia pestis Nepal516] gi|108778567|gb|ABG12625.1| hypothetical protein YPA_0657 [Yersinia pestis Antiqua] gi|115347126|emb|CAL20019.1| conserved hypothetical protein [Yersinia pestis CO92] gi|145211296|gb|ABP40703.1| hypothetical protein YPDSF_2328 [Yersinia pestis Pestoides F] gi|149290998|gb|EDM41073.1| hypothetical protein YPE_1859 [Yersinia pestis CA88-4125] gi|152960177|gb|ABS47638.1| ATP-dependent Clp protease adaptor protein ClpS [Yersinia pseudotuberculosis IP 31758] gi|162351046|gb|ABX84994.1| ATP-dependent Clp protease adaptor protein ClpS [Yersinia pestis Angola] gi|165913120|gb|EDR31744.1| ATP-dependent Clp protease adaptor protein ClpS [Yersinia pestis biovar Orientalis str. IP275] gi|165923372|gb|EDR40504.1| ATP-dependent Clp protease adaptor protein ClpS [Yersinia pestis biovar Orientalis str. F1991016] gi|165991205|gb|EDR43506.1| ATP-dependent Clp protease adaptor protein ClpS [Yersinia pestis biovar Antiqua str. E1979001] gi|166207166|gb|EDR51646.1| ATP-dependent Clp protease adaptor protein ClpS [Yersinia pestis biovar Antiqua str. B42003004] gi|166962549|gb|EDR58570.1| ATP-dependent Clp protease adaptor protein ClpS [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167050537|gb|EDR61945.1| ATP-dependent Clp protease adaptor protein ClpS [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167056919|gb|EDR66682.1| ATP-dependent Clp protease adaptor protein ClpS [Yersinia pestis biovar Mediaevalis str. K1973002] gi|169751452|gb|ACA68970.1| ATP-dependent Clp protease adaptor protein ClpS [Yersinia pseudotuberculosis YPIII] gi|186697836|gb|ACC88465.1| ATP-dependent Clp protease adaptor protein ClpS [Yersinia pseudotuberculosis PB1/+] gi|229678957|gb|EEO75060.1| regulatory protein for ClpA substrate specificity [Yersinia pestis Nepal516] gi|229689785|gb|EEO81846.1| regulatory protein for ClpA substrate specificity [Yersinia pestis biovar Orientalis str. India 195] gi|229697700|gb|EEO87747.1| regulatory protein for ClpA substrate specificity [Yersinia pestis biovar Orientalis str. PEXU2] gi|229700734|gb|EEO88763.1| regulatory protein for ClpA substrate specificity [Yersinia pestis Pestoides A] gi|262361398|gb|ACY58119.1| ATP-dependent Clp protease adaptor protein ClpS [Yersinia pestis D106004] gi|262365065|gb|ACY61622.1| ATP-dependent Clp protease adaptor protein ClpS [Yersinia pestis D182038] gi|270335484|gb|EFA46261.1| ATP-dependent Clp protease adaptor protein ClpS [Yersinia pestis KIM D27] gi|294353817|gb|ADE64158.1| ATP-dependent Clp protease adaptor protein ClpS [Yersinia pestis Z176003] gi|320015777|gb|ADV99348.1| regulatory protein for ClpA substrate specificity [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 106 Score = 94.0 bits (232), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 43/84 (51%), Positives = 60/84 (71%) Query: 54 VRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIA 113 ++ P +Y+V+L ND+YTPMEFVI VLQ FF D E A +ML VH+QG CGV+ E+A Sbjct: 22 LQPPSMYKVILNNDDYTPMEFVIDVLQKFFSYDIERATQLMLNVHYQGKAICGVFTAEVA 81 Query: 114 EMKVNQVMNYSRQHQYPLQCIMEQ 137 E KV V Y+R++++PL C +E+ Sbjct: 82 ETKVAHVNQYARENEHPLLCTLEK 105 >gi|254480629|ref|ZP_05093876.1| ATP-dependent Clp protease adaptor protein ClpS [marine gamma proteobacterium HTCC2148] gi|214039212|gb|EEB79872.1| ATP-dependent Clp protease adaptor protein ClpS [marine gamma proteobacterium HTCC2148] Length = 107 Score = 94.0 bits (232), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 40/84 (47%), Positives = 61/84 (72%) Query: 53 KVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEI 112 +++ P L++V+L+ND+YTPMEFV+ VL++FF + E A +ML VH QG G CG++ +I Sbjct: 20 ELKKPPLFKVVLMNDDYTPMEFVVEVLESFFRMNREQATHVMLTVHTQGKGVCGIFTRDI 79 Query: 113 AEMKVNQVMNYSRQHQYPLQCIME 136 AE K QV Y+R+ ++PL C +E Sbjct: 80 AETKAAQVNQYARESEHPLLCEVE 103 >gi|294084618|ref|YP_003551376.1| ATP-dependent Clp protease adaptor protein ClpS [Candidatus Puniceispirillum marinum IMCC1322] gi|292664191|gb|ADE39292.1| ATP-dependent Clp protease adaptor protein ClpS [Candidatus Puniceispirillum marinum IMCC1322] Length = 75 Score = 93.6 bits (231), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 39/75 (52%), Positives = 59/75 (78%) Query: 64 LVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNY 123 ++ND+YTPMEFV+HVLQ+FF + + A IML VH +G+G CG+Y++EIAE K ++ M Y Sbjct: 1 MMNDDYTPMEFVVHVLQHFFGRTADEATQIMLNVHQRGVGICGIYSFEIAETKASKTMEY 60 Query: 124 SRQHQYPLQCIMEQK 138 +RQ ++PLQ +E++ Sbjct: 61 ARQKEHPLQLQLEKE 75 >gi|90021331|ref|YP_527158.1| ATP-dependent Clp protease adaptor protein ClpS [Saccharophagus degradans 2-40] gi|89950931|gb|ABD80946.1| ATP-dependent Clp protease adaptor protein ClpS [Saccharophagus degradans 2-40] Length = 124 Score = 93.6 bits (231), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 38/84 (45%), Positives = 63/84 (75%) Query: 53 KVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEI 112 +++ P +Y+V+++ND+YTPMEFV+ VL+ FF + E+A IML+VH +G CGV++ ++ Sbjct: 33 RLKRPPMYKVVMLNDDYTPMEFVVEVLELFFSMNRESATRIMLRVHTEGKAVCGVFSRDV 92 Query: 113 AEMKVNQVMNYSRQHQYPLQCIME 136 AE K QV Y++Q+++PL C +E Sbjct: 93 AETKAAQVNQYAKQNEHPLLCEIE 116 >gi|78776659|ref|YP_392974.1| ATP-dependent Clp protease adaptor protein ClpS [Sulfurimonas denitrificans DSM 1251] gi|78497199|gb|ABB43739.1| ATP-dependent Clp protease adaptor protein ClpS [Sulfurimonas denitrificans DSM 1251] Length = 99 Score = 93.6 bits (231), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 44/95 (46%), Positives = 65/95 (68%) Query: 44 LDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIG 103 +D E + K++ PK Y+VLL+ND+YT MEFVI +L F+K++E A IML++H + G Sbjct: 5 IDLETKEKVKIKYPKKYKVLLLNDDYTSMEFVIDILITIFHKNYEQAHQIMLEIHKKTKG 64 Query: 104 ECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 CG+Y YEIAE KV QV +R + + L+ ME++ Sbjct: 65 ICGIYTYEIAETKVMQVHKKARDNGFALRATMEEE 99 >gi|297570438|ref|YP_003691782.1| ATP-dependent Clp protease adaptor protein ClpS [Desulfurivibrio alkaliphilus AHT2] gi|296926353|gb|ADH87163.1| ATP-dependent Clp protease adaptor protein ClpS [Desulfurivibrio alkaliphilus AHT2] Length = 105 Score = 93.6 bits (231), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 42/95 (44%), Positives = 64/95 (67%) Query: 44 LDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIG 103 LD+ R ++R P Y+VLL ND+YT M+FV+ VL+ F D ++A IM+ VH +G+G Sbjct: 11 LDAVTREEQELRQPPRYKVLLHNDDYTTMDFVVTVLETVFKHDTDSAHRIMMSVHKEGVG 70 Query: 104 ECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 GVY ++AE K V N +R+H+YPL+C +E++ Sbjct: 71 VAGVYPRDVAETKSAMVHNLARKHEYPLKCSLERE 105 >gi|304413815|ref|ZP_07395232.1| regulatory protein for ClpA substrate specificity [Candidatus Regiella insecticola LSR1] gi|304283535|gb|EFL91930.1| regulatory protein for ClpA substrate specificity [Candidatus Regiella insecticola LSR1] Length = 106 Score = 93.6 bits (231), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 44/86 (51%), Positives = 61/86 (70%) Query: 52 SKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYE 111 K++ P LY+V+L ND+YTPMEFVI VLQ FF D E A IML +H+QG CGV+ E Sbjct: 20 DKLQPPSLYKVILNNDDYTPMEFVIDVLQKFFSYDIELATQIMLDIHYQGRAICGVFTAE 79 Query: 112 IAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +AE KV V Y+R++++PL C +++ Sbjct: 80 VAETKVVLVNQYARKNEHPLLCTLKK 105 >gi|330719866|gb|EGG98352.1| ATP-dependent Clp protease adaptor protein ClpS [gamma proteobacterium IMCC2047] Length = 131 Score = 93.2 bits (230), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 41/86 (47%), Positives = 60/86 (69%) Query: 52 SKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYE 111 K++ P +Y+V++ ND+YTPM+FV+ +L++FF + E A IML VH QG CGV+ + Sbjct: 44 PKLKPPPMYKVVMYNDDYTPMDFVVEILESFFNLNREKATQIMLTVHTQGKAVCGVFTRD 103 Query: 112 IAEMKVNQVMNYSRQHQYPLQCIMEQ 137 IAE KV QV YS +++PL C M+Q Sbjct: 104 IAETKVTQVNQYSSDNEHPLLCGMDQ 129 >gi|67460271|sp|Q6FCI2|CLPS_ACIAD RecName: Full=ATP-dependent Clp protease adapter protein ClpS Length = 107 Score = 93.2 bits (230), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 42/88 (47%), Positives = 60/88 (68%) Query: 51 SSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAY 110 +++ P LY V+L+ND+YTPM+FVI +LQ +F + + A +ML VH++G G GVY Sbjct: 19 PPELKRPPLYAVVLLNDDYTPMDFVIEILQQYFALNLDQATQVMLTVHYEGKGVAGVYPR 78 Query: 111 EIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 +IAE K NQV NY+R +PL C +E K Sbjct: 79 DIAETKANQVNNYARSQGHPLLCQIEPK 106 >gi|115376673|ref|ZP_01463901.1| ATP-dependent Clp protease adaptor protein ClpS [Stigmatella aurantiaca DW4/3-1] gi|310823925|ref|YP_003956283.1| ATP-dependent CLP protease, adapter protein CLPs [Stigmatella aurantiaca DW4/3-1] gi|115366290|gb|EAU65297.1| ATP-dependent Clp protease adaptor protein ClpS [Stigmatella aurantiaca DW4/3-1] gi|309396997|gb|ADO74456.1| ATP-dependent Clp protease, adapter protein ClpS [Stigmatella aurantiaca DW4/3-1] Length = 107 Score = 93.2 bits (230), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 47/98 (47%), Positives = 61/98 (62%) Query: 39 EFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVH 98 E D + +E R K++ P LY+VLL NDNYT EFV+ VL+ F+K A IML VH Sbjct: 6 ENDENVVTETRPEKKLKKPTLYKVLLHNDNYTTREFVVAVLKEIFHKSEGDAVQIMLHVH 65 Query: 99 HQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIME 136 + GIG GVY YE+AE K+ V +R + YPL+ ME Sbjct: 66 YNGIGVAGVYTYEVAETKIKTVEAAARDNGYPLRLSME 103 >gi|238753481|ref|ZP_04614844.1| ATP-dependent Clp protease adapter protein clpS [Yersinia ruckeri ATCC 29473] gi|238708434|gb|EEQ00789.1| ATP-dependent Clp protease adapter protein clpS [Yersinia ruckeri ATCC 29473] Length = 106 Score = 93.2 bits (230), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 42/84 (50%), Positives = 60/84 (71%) Query: 54 VRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIA 113 ++ P +Y+V+L ND+YTPMEFVI VLQ FF D E A +ML VH++G CGV+ E+A Sbjct: 22 LKPPSMYKVILNNDDYTPMEFVIDVLQKFFSYDIERATQLMLNVHYKGKAICGVFTAEVA 81 Query: 114 EMKVNQVMNYSRQHQYPLQCIMEQ 137 E KV V Y+R++++PL C +E+ Sbjct: 82 ETKVAHVNQYARENEHPLLCTLEK 105 >gi|212703188|ref|ZP_03311316.1| hypothetical protein DESPIG_01230 [Desulfovibrio piger ATCC 29098] gi|212673454|gb|EEB33937.1| hypothetical protein DESPIG_01230 [Desulfovibrio piger ATCC 29098] Length = 106 Score = 93.2 bits (230), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 51/111 (45%), Positives = 66/111 (59%), Gaps = 7/111 (6%) Query: 27 MADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKD 86 MAD N+ G D+ K++ P Y VLL ND+YT M+FV+ VL + F+K Sbjct: 1 MADETWNEPGT-------DTATIVKKKIKEPDRYVVLLHNDDYTSMDFVVGVLCDIFHKT 53 Query: 87 HETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 E A IML VH QGIG+CGVY +EIAE KV V +R +PL+C ME+ Sbjct: 54 PEEATAIMLAVHQQGIGQCGVYTHEIAETKVALVRRRARAAGFPLRCTMEK 104 >gi|329894886|ref|ZP_08270685.1| ATP-dependent Clp protease adaptor protein ClpS [gamma proteobacterium IMCC3088] gi|328922615|gb|EGG29950.1| ATP-dependent Clp protease adaptor protein ClpS [gamma proteobacterium IMCC3088] Length = 113 Score = 93.2 bits (230), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 42/83 (50%), Positives = 60/83 (72%) Query: 54 VRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIA 113 ++ P LY+V+L+ND+YTPMEFV+ VL+ FF + E A IML VH QG G CG+Y ++A Sbjct: 24 LKKPPLYKVVLMNDDYTPMEFVVLVLERFFRMNREKATQIMLAVHTQGKGVCGIYPRDVA 83 Query: 114 EMKVNQVMNYSRQHQYPLQCIME 136 E K +V +SR++Q+PL C +E Sbjct: 84 ETKAYEVNEFSRENQHPLLCEVE 106 >gi|255320456|ref|ZP_05361637.1| substrate modulator for ClpAP, directs protease activity towards aggregated protein [Acinetobacter radioresistens SK82] gi|262378352|ref|ZP_06071509.1| substrate modulator for ClpAP [Acinetobacter radioresistens SH164] gi|255302428|gb|EET81664.1| substrate modulator for ClpAP, directs protease activity towards aggregated protein [Acinetobacter radioresistens SK82] gi|262299637|gb|EEY87549.1| substrate modulator for ClpAP [Acinetobacter radioresistens SH164] Length = 137 Score = 92.8 bits (229), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 45/115 (39%), Positives = 70/115 (60%), Gaps = 3/115 (2%) Query: 27 MADSRMNKKGIAEFDNCLDSEVRF---SSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFF 83 + D +N + ++ D E+ +++ P LY V+L+ND+YTPM+FVI +LQ +F Sbjct: 22 LVDWHLNPRLSDSQNDEADGEIAVKPAPPQLKKPPLYAVVLLNDDYTPMDFVIEILQQYF 81 Query: 84 YKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 + + A +ML VH++G G G+Y +IAE K NQV NY+R +PL C +E K Sbjct: 82 ALNLDQATQVMLTVHYEGKGVAGIYPRDIAETKANQVNNYARSQGHPLLCQIEPK 136 >gi|50084541|ref|YP_046051.1| ATP-dependent Clp protease adaptor protein ClpS [Acinetobacter sp. ADP1] gi|49530517|emb|CAG68229.1| substrate modulator for ClpAP, directs protease activity towards aggregated proteins [Acinetobacter sp. ADP1] Length = 137 Score = 92.8 bits (229), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 42/88 (47%), Positives = 60/88 (68%) Query: 51 SSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAY 110 +++ P LY V+L+ND+YTPM+FVI +LQ +F + + A +ML VH++G G GVY Sbjct: 49 PPELKRPPLYAVVLLNDDYTPMDFVIEILQQYFALNLDQATQVMLTVHYEGKGVAGVYPR 108 Query: 111 EIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 +IAE K NQV NY+R +PL C +E K Sbjct: 109 DIAETKANQVNNYARSQGHPLLCQIEPK 136 >gi|301167864|emb|CBW27449.1| ATP-dependent Clp protease adaptor protein clpS [Bacteriovorax marinus SJ] Length = 123 Score = 92.8 bits (229), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 42/77 (54%), Positives = 60/77 (77%) Query: 60 YRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQ 119 Y+VL+ ND+YT MEFVI++LQ F K+ E A+ IMLKVH++GIG CGVY+YEIAE K + Sbjct: 44 YKVLIHNDDYTTMEFVIYILQKVFAKNLEEAQAIMLKVHNEGIGVCGVYSYEIAETKSEK 103 Query: 120 VMNYSRQHQYPLQCIME 136 V ++++ +PL+C +E Sbjct: 104 VNQEAKENGHPLKCTIE 120 >gi|39931007|sp|Q7VFW0|CLPS_HELHP RecName: Full=ATP-dependent Clp protease adapter protein ClpS Length = 99 Score = 92.8 bits (229), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 40/91 (43%), Positives = 59/91 (64%) Query: 47 EVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECG 106 E + + PK+YRVLL+ND++T M+FV +L F K + A I LK+H+ G G CG Sbjct: 7 ETSLDTLLEEPKMYRVLLLNDDWTAMDFVARILMEVFDKTSDEATAITLKIHNDGKGVCG 66 Query: 107 VYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +Y Y+IAE+K+ V ++QH YPL+ I E+ Sbjct: 67 IYTYDIAELKMQIVSQMAKQHGYPLRVITEE 97 >gi|152997267|ref|YP_001342102.1| ATP-dependent Clp protease adaptor protein ClpS [Marinomonas sp. MWYL1] gi|150838191|gb|ABR72167.1| ATP-dependent Clp protease adaptor protein ClpS [Marinomonas sp. MWYL1] Length = 116 Score = 92.8 bits (229), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 39/87 (44%), Positives = 62/87 (71%) Query: 51 SSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAY 110 ++++ P +Y+V+L ND+YTPM+FV+ VLQ FF D E A +ML+VH +G G CG+Y + Sbjct: 28 ETELKPPSMYQVVLFNDDYTPMDFVVFVLQRFFSMDGEKANQVMLEVHQKGKGVCGIYPF 87 Query: 111 EIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +IAE KV V + Q+++PL C +++ Sbjct: 88 DIAETKVAMVQQFVEQNEHPLMCDLQK 114 >gi|114778159|ref|ZP_01453046.1| hypothetical protein SPV1_00837 [Mariprofundus ferrooxydans PV-1] gi|114551577|gb|EAU54131.1| hypothetical protein SPV1_00837 [Mariprofundus ferrooxydans PV-1] Length = 112 Score = 92.4 bits (228), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 41/102 (40%), Positives = 67/102 (65%), Gaps = 1/102 (0%) Query: 37 IAEFDNCLDSEVRFS-SKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIML 95 I D+ + E + +++ P ++R+L++ND++TPM+FV+ VL FF+K TA +ML Sbjct: 4 ITTPDSVRNPETETAEPQLQPPPMFRILMLNDDFTPMDFVVDVLIRFFHKSEATANQLML 63 Query: 96 KVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 ++H +G CG+Y +IAE K+ QV SR +PL+CIME+ Sbjct: 64 QIHLEGRAMCGIYPRDIAETKLQQVEAASRTSGHPLRCIMEK 105 >gi|77360665|ref|YP_340240.1| modulator of ClpA substrate specificity [Pseudoalteromonas haloplanktis TAC125] gi|76875576|emb|CAI86797.1| modulator of ClpA substrate specificity [Pseudoalteromonas haloplanktis TAC125] Length = 102 Score = 92.4 bits (228), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 41/86 (47%), Positives = 60/86 (69%) Query: 53 KVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEI 112 K++ P+ Y+V+L ND+YTPM+FVI VL FF D + A +ML++H QG G CGV++ ++ Sbjct: 17 KLQPPRKYKVVLNNDDYTPMDFVIEVLMTFFNMDSDRATDVMLQIHQQGKGICGVFSSDV 76 Query: 113 AEMKVNQVMNYSRQHQYPLQCIMEQK 138 A K QV YSR +++PL C EQ+ Sbjct: 77 AHTKAEQVNRYSRDNEHPLLCSCEQE 102 >gi|297183971|gb|ADI20091.1| uncharacterized conserved protein [uncultured alpha proteobacterium EB080_L06A09] Length = 111 Score = 92.4 bits (228), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 45/110 (40%), Positives = 73/110 (66%), Gaps = 2/110 (1%) Query: 31 RMNKKGIAEFDNCLDSEVRFSSKVRVPK--LYRVLLVNDNYTPMEFVIHVLQNFFYKDHE 88 ++N+K I D +D + + + K +Y+VLL+ND+YTPMEFV+H+L+ +F Sbjct: 2 QINEKAIMSEDENIDVGLATKATPKTKKPKMYKVLLLNDDYTPMEFVVHILERYFGTSGS 61 Query: 89 TAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 A +M+ VH +G+ GV++++IAE KV QV +R+HQ+PLQC ME++ Sbjct: 62 QAYELMMVVHQKGLAVVGVFSHDIAETKVMQVTELARKHQHPLQCTMEKE 111 >gi|262370290|ref|ZP_06063616.1| substrate modulator for ClpAP [Acinetobacter johnsonii SH046] gi|262314632|gb|EEY95673.1| substrate modulator for ClpAP [Acinetobacter johnsonii SH046] Length = 138 Score = 92.0 bits (227), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 42/88 (47%), Positives = 60/88 (68%) Query: 51 SSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAY 110 +++ P LY V+L+ND+YTPM+FVI +LQ +F + + A +ML VH++G G GVY Sbjct: 50 PPELKRPPLYAVVLMNDDYTPMDFVIEILQQYFALNLDQATQVMLTVHYEGKGVAGVYPR 109 Query: 111 EIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 +IAE K NQV NY+R +PL C +E K Sbjct: 110 DIAETKANQVNNYARSQGHPLLCQIEPK 137 >gi|320354854|ref|YP_004196193.1| ATP-dependent Clp protease adaptor protein ClpS [Desulfobulbus propionicus DSM 2032] gi|320123356|gb|ADW18902.1| ATP-dependent Clp protease adaptor protein ClpS [Desulfobulbus propionicus DSM 2032] Length = 105 Score = 92.0 bits (227), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 42/91 (46%), Positives = 63/91 (69%) Query: 47 EVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECG 106 + R +++ P LY+VLL ND+YT M+FV+ +LQ F+K+ + A IML VHHQG+G G Sbjct: 13 QTRDKEQLQEPPLYKVLLHNDDYTTMDFVVMILQTVFHKNTDEATRIMLNVHHQGVGIAG 72 Query: 107 VYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 VY EI E KV V ++++Q+PL+C +E+ Sbjct: 73 VYTREIGETKVAIVHRLAKRNQFPLRCSLEK 103 >gi|37525540|ref|NP_928884.1| ATP-dependent Clp protease adaptor protein ClpS [Photorhabdus luminescens subsp. laumondii TTO1] gi|39930943|sp|Q7N6F7|CLPS_PHOLL RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|36784968|emb|CAE13886.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii TTO1] Length = 106 Score = 91.7 bits (226), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 46/103 (44%), Positives = 66/103 (64%), Gaps = 4/103 (3%) Query: 39 EFDNCLDSEVRF----SSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIM 94 E+ N L S+ K++ P +Y+V+L ND+YTPMEFV+ VL+ FF D E A +M Sbjct: 3 EYHNSLKSKESVKDERQQKLQPPSMYQVILNNDDYTPMEFVVDVLRKFFSYDIERATQLM 62 Query: 95 LKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 L VH+QG CGVY E+AE K QV Y++++ +PL C +E+ Sbjct: 63 LDVHYQGKAVCGVYTAEVAETKAAQVNMYAKEYGHPLLCTLEK 105 >gi|303327023|ref|ZP_07357465.1| ATP-dependent Clp protease adaptor protein ClpS [Desulfovibrio sp. 3_1_syn3] gi|302863011|gb|EFL85943.1| ATP-dependent Clp protease adaptor protein ClpS [Desulfovibrio sp. 3_1_syn3] Length = 106 Score = 91.7 bits (226), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 45/95 (47%), Positives = 62/95 (65%), Gaps = 2/95 (2%) Query: 45 DSEVR--FSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGI 102 D E R K++ P YRVLL ND+YT M+FVI++L F+K E A IML VH QG+ Sbjct: 10 DGESRTIVVKKLKEPDRYRVLLHNDDYTSMDFVINILCGVFHKPLEEATAIMLAVHQQGV 69 Query: 103 GECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 G+CG+Y E+AE KV++V + +PL+C ME+ Sbjct: 70 GQCGIYTREVAEAKVSRVHREAHGAGFPLRCTMEK 104 >gi|315179860|gb|ADT86774.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio furnissii NCTC 11218] Length = 80 Score = 91.7 bits (226), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 41/79 (51%), Positives = 57/79 (72%) Query: 59 LYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVN 118 +Y V+L ND+YTPM+FVI +L+ FF D E A +MLKVH++G CG + E+AE KV Sbjct: 1 MYNVVLNNDDYTPMDFVIEILERFFSMDIERATQVMLKVHYEGKAICGTFTAEVAETKVA 60 Query: 119 QVMNYSRQHQYPLQCIMEQ 137 QV YSR++++PL C ME+ Sbjct: 61 QVTMYSRENEHPLLCTMER 79 >gi|162452665|ref|YP_001615032.1| hypothetical protein sce4389 [Sorangium cellulosum 'So ce 56'] gi|161163247|emb|CAN94552.1| hypothetical protein sce4389 [Sorangium cellulosum 'So ce 56'] Length = 132 Score = 91.7 bits (226), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 47/126 (37%), Positives = 70/126 (55%), Gaps = 5/126 (3%) Query: 13 VKRDGILALMSFIFMADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPM 72 +R G LA++ FM + ++ D D KV P+ Y+V+ ND+YT M Sbjct: 12 ARRGGALAILPDGFMPNDPEERE-----DRQGDLATERERKVEKPRRYKVVFHNDDYTTM 66 Query: 73 EFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQ 132 EFV+ VL FF++ A IML VHH+G G GVY ++AE KV QV +++++H PL+ Sbjct: 67 EFVVLVLMKFFHRTETEATHIMLSVHHRGHGVAGVYTKDVAETKVAQVQDFAKEHGMPLR 126 Query: 133 CIMEQK 138 E + Sbjct: 127 LTAEPE 132 >gi|254496296|ref|ZP_05109183.1| conserved hypothetical protein [Legionella drancourtii LLAP12] gi|254354484|gb|EET13132.1| conserved hypothetical protein [Legionella drancourtii LLAP12] Length = 107 Score = 91.7 bits (226), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 46/94 (48%), Positives = 66/94 (70%), Gaps = 2/94 (2%) Query: 45 DSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGE 104 + EVR +K+ P+ YRV+L+ND+YTPM+FV+ VL++FF+ E A +ML+VH QG G Sbjct: 16 EPEVRTENKL--PRKYRVVLLNDDYTPMDFVVDVLKHFFHLSEEMAVQVMLQVHIQGKGV 73 Query: 105 CGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 CGV+ +IAE KV V Y+R +Q+PL ME + Sbjct: 74 CGVFTRDIAETKVALVNEYARMNQHPLLSSMEPE 107 >gi|313143016|ref|ZP_07805209.1| ATP-dependent Clp protease adapter protein clpS [Helicobacter cinaedi CCUG 18818] gi|313128047|gb|EFR45664.1| ATP-dependent Clp protease adapter protein clpS [Helicobacter cinaedi CCUG 18818] Length = 87 Score = 91.3 bits (225), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 40/81 (49%), Positives = 56/81 (69%) Query: 57 PKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMK 116 PKLYRVLL+ND++T M FV H+L F K + A+ I LKVH++G G CG+Y Y+IAE+K Sbjct: 5 PKLYRVLLLNDDWTAMNFVTHILMEVFDKTSQEARAITLKVHNEGKGVCGIYPYDIAELK 64 Query: 117 VNQVMNYSRQHQYPLQCIMEQ 137 V +++ YPL+ I E+ Sbjct: 65 TQLVSQKAKEQGYPLRVITEE 85 >gi|302879452|ref|YP_003848016.1| ATP-dependent Clp protease adaptor protein ClpS [Gallionella capsiferriformans ES-2] gi|302582241|gb|ADL56252.1| ATP-dependent Clp protease adaptor protein ClpS [Gallionella capsiferriformans ES-2] Length = 102 Score = 91.3 bits (225), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 40/84 (47%), Positives = 60/84 (71%) Query: 54 VRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIA 113 + P +Y+V+L ND+YT MEFVI VLQ FF ++E A+ +ML++H+ G CGVY ++A Sbjct: 18 TKPPGMYKVVLYNDDYTTMEFVIDVLQRFFAINNERAQQLMLQIHNNGSATCGVYTRDVA 77 Query: 114 EMKVNQVMNYSRQHQYPLQCIMEQ 137 E KV QV Y++Q+ +PL+C E+ Sbjct: 78 ETKVAQVTEYAQQNGHPLRCGTEE 101 >gi|262198176|ref|YP_003269385.1| ATP-dependent Clp protease adaptor protein ClpS [Haliangium ochraceum DSM 14365] gi|262081523|gb|ACY17492.1| ATP-dependent Clp protease adaptor protein ClpS [Haliangium ochraceum DSM 14365] Length = 116 Score = 91.3 bits (225), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 43/108 (39%), Positives = 64/108 (59%), Gaps = 3/108 (2%) Query: 29 DSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHE 88 DS + G E ++ ++ + P LY+VLL ND+YT EFV+ VLQ+ F + Sbjct: 9 DSGKKRPGTKEERGVA---IKERTRTKKPPLYKVLLHNDDYTTKEFVVWVLQSIFQRSES 65 Query: 89 TAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIME 136 A IM+ VH+ G+G G+Y E+AE K+ + N ++ H+YPLQC ME Sbjct: 66 EAVRIMMHVHNTGVGIAGIYTLEVAETKMTKTTNLAQAHEYPLQCSME 113 >gi|146307417|ref|YP_001187882.1| ATP-dependent Clp protease adaptor protein ClpS [Pseudomonas mendocina ymp] gi|166214739|sp|A4XUY4|CLPS_PSEMY RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|145575618|gb|ABP85150.1| ATP-dependent Clp protease adaptor protein ClpS [Pseudomonas mendocina ymp] Length = 120 Score = 91.3 bits (225), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 41/84 (48%), Positives = 58/84 (69%) Query: 54 VRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIA 113 ++ P +Y+V+L ND+YTPM+FV+ VL+ FF + E A IML VH +G CGVY +IA Sbjct: 35 LQAPPMYKVVLFNDDYTPMDFVVEVLETFFGMNRELATKIMLTVHTEGRAVCGVYTRDIA 94 Query: 114 EMKVNQVMNYSRQHQYPLQCIMEQ 137 E K QV Y+R+ Q+PL C +E+ Sbjct: 95 ETKAMQVNQYARESQHPLLCEIEK 118 >gi|330503290|ref|YP_004380159.1| ATP-dependent Clp protease adaptor protein ClpS [Pseudomonas mendocina NK-01] gi|328917576|gb|AEB58407.1| ATP-dependent Clp protease adaptor protein ClpS [Pseudomonas mendocina NK-01] Length = 120 Score = 91.3 bits (225), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 41/84 (48%), Positives = 58/84 (69%) Query: 54 VRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIA 113 ++ P +Y+V+L ND+YTPM+FV+ VL+ FF + E A IML VH +G CGVY +IA Sbjct: 35 LQAPPMYKVVLFNDDYTPMDFVVEVLETFFGMNRELATKIMLAVHTEGRAVCGVYTRDIA 94 Query: 114 EMKVNQVMNYSRQHQYPLQCIMEQ 137 E K QV Y+R+ Q+PL C +E+ Sbjct: 95 ETKAMQVNQYARESQHPLLCEIEK 118 >gi|116328081|ref|YP_797801.1| hypothetical protein LBL_1378 [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116331466|ref|YP_801184.1| hypothetical protein LBJ_1906 [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|122280789|sp|Q04RP4|CLPS_LEPBJ RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|122284127|sp|Q051X7|CLPS_LEPBL RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|116120825|gb|ABJ78868.1| conserved hypothetical protein [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116125155|gb|ABJ76426.1| conserved hypothetical protein [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 108 Score = 91.3 bits (225), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 42/100 (42%), Positives = 62/100 (62%) Query: 37 IAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLK 96 I FD + + K++ P YRV+++ND++TPMEFV+ +LQ F++ ++ IMLK Sbjct: 4 IFRFDTEEQTLTKEKVKLKRPSKYRVIILNDDFTPMEFVVWILQFVFHRSRAQSQQIMLK 63 Query: 97 VHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIME 136 H G CGVY++++A KV QV + QH YPL C ME Sbjct: 64 AHITGKALCGVYSHDVARTKVIQVQQLAEQHGYPLHCTME 103 >gi|323697696|ref|ZP_08109608.1| ATP-dependent Clp protease adaptor protein ClpS [Desulfovibrio sp. ND132] gi|323457628|gb|EGB13493.1| ATP-dependent Clp protease adaptor protein ClpS [Desulfovibrio desulfuricans ND132] Length = 104 Score = 90.9 bits (224), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 43/92 (46%), Positives = 60/92 (65%) Query: 45 DSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGE 104 DSE+ +V+ PK Y+VLL ND+YT M+FV+ +L F++ A IML VH+QG G Sbjct: 11 DSELLGQHEVKEPKKYKVLLHNDDYTTMDFVVEILVRVFHRTEAQATAIMLSVHNQGYGV 70 Query: 105 CGVYAYEIAEMKVNQVMNYSRQHQYPLQCIME 136 CGVY E+AE KV+ V ++ +PL+C ME Sbjct: 71 CGVYTAEVAETKVDLVHRLAKSAGFPLKCSME 102 >gi|325267632|ref|ZP_08134284.1| ATP-dependent Clp protease adaptor protein ClpS [Kingella denitrificans ATCC 33394] gi|324980982|gb|EGC16642.1| ATP-dependent Clp protease adaptor protein ClpS [Kingella denitrificans ATCC 33394] Length = 100 Score = 90.9 bits (224), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 40/85 (47%), Positives = 59/85 (69%) Query: 53 KVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEI 112 K+ PK Y V+L+ND+YTPM+FV+ VL F +HE A +ML++HH+G G CGVY +I Sbjct: 13 KLTPPKRYAVVLLNDHYTPMDFVVAVLTEIFALNHEKAVAVMLQIHHEGSGVCGVYTRDI 72 Query: 113 AEMKVNQVMNYSRQHQYPLQCIMEQ 137 AE K QV+ + + +PL CI+++ Sbjct: 73 AETKRQQVLQAADEAGHPLMCIVQE 97 >gi|119503235|ref|ZP_01625319.1| substrate modulator for ClpAP, directs protease activity towards aggregated proteins [marine gamma proteobacterium HTCC2080] gi|119460881|gb|EAW41972.1| substrate modulator for ClpAP, directs protease activity towards aggregated proteins [marine gamma proteobacterium HTCC2080] Length = 116 Score = 90.9 bits (224), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 46/107 (42%), Positives = 67/107 (62%), Gaps = 1/107 (0%) Query: 31 RMNKKGIAEFDNCLDSEVRFS-SKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHET 89 +M A+ D+ D V + K++ P L++V+L+ND+YTPMEFV+ +L+++F E Sbjct: 5 QMGPPDKADRDDEGDLAVAPAKPKLKRPPLFQVVLLNDDYTPMEFVVEILESYFRLGREQ 64 Query: 90 AKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIME 136 A IML VH +G G CGVY +IAE K QV Y+R +PL C +E Sbjct: 65 ATQIMLMVHTKGKGVCGVYPRDIAESKATQVNTYARDSGHPLLCEVE 111 >gi|126641956|ref|YP_001084940.1| ATP-dependent Clp protease adaptor protein ClpS [Acinetobacter baumannii ATCC 17978] gi|169633633|ref|YP_001707369.1| ATP-dependent Clp protease adaptor protein ClpS [Acinetobacter baumannii SDF] gi|169795754|ref|YP_001713547.1| ATP-dependent Clp protease adaptor protein ClpS [Acinetobacter baumannii AYE] gi|213157554|ref|YP_002319599.1| ATP-dependent Clp protease adaptor protein [Acinetobacter baumannii AB0057] gi|215483239|ref|YP_002325446.1| ATP-dependent Clp protease adaptor protein ClpS family protein [Acinetobacter baumannii AB307-0294] gi|239503974|ref|ZP_04663284.1| ATP-dependent Clp protease adaptor protein ClpS [Acinetobacter baumannii AB900] gi|260554817|ref|ZP_05827038.1| substrate modulator for ClpAP [Acinetobacter baumannii ATCC 19606] gi|294837620|ref|ZP_06782303.1| ATP-dependent Clp protease adaptor protein ClpS [Acinetobacter sp. 6013113] gi|294840916|ref|ZP_06785599.1| ATP-dependent Clp protease adaptor protein ClpS [Acinetobacter sp. 6014059] gi|294856990|ref|ZP_06794759.1| ATP-dependent Clp protease adaptor protein ClpS [Acinetobacter sp. 6013150] gi|301344683|ref|ZP_07225424.1| ATP-dependent Clp protease adaptor protein ClpS [Acinetobacter baumannii AB056] gi|301511220|ref|ZP_07236457.1| ATP-dependent Clp protease adaptor protein ClpS [Acinetobacter baumannii AB058] gi|301595568|ref|ZP_07240576.1| ATP-dependent Clp protease adaptor protein ClpS [Acinetobacter baumannii AB059] gi|126387840|gb|ABO12338.1| putative protease [Acinetobacter baumannii ATCC 17978] gi|169148681|emb|CAM86547.1| substrate modulator for ClpAP, directs protease activity towards aggregated proteins [Acinetobacter baumannii AYE] gi|169152425|emb|CAP01380.1| substrate modulator for ClpAP, directs protease activity towards aggregated proteins [Acinetobacter baumannii] gi|213056714|gb|ACJ41616.1| ATP-dependent Clp protease adaptor protein [Acinetobacter baumannii AB0057] gi|213988872|gb|ACJ59171.1| ATP-dependent Clp protease adaptor protein ClpS family protein [Acinetobacter baumannii AB307-0294] gi|260411359|gb|EEX04656.1| substrate modulator for ClpAP [Acinetobacter baumannii ATCC 19606] gi|322508668|gb|ADX04122.1| clpS [Acinetobacter baumannii 1656-2] gi|323518276|gb|ADX92657.1| ATP-dependent Clp protease adaptor protein ClpS [Acinetobacter baumannii TCDC-AB0715] Length = 137 Score = 90.9 bits (224), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 41/88 (46%), Positives = 59/88 (67%) Query: 51 SSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAY 110 +++ P LY V+L+ND+YTPM+FVI +LQ +F + + A +ML VH++G G GVY Sbjct: 49 PPELKRPPLYAVVLLNDDYTPMDFVIEILQQYFAMNLDQATQVMLTVHYEGKGTAGVYPR 108 Query: 111 EIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 +IAE K N V NY+R +PL C +E K Sbjct: 109 DIAETKANLVNNYARSQGHPLLCQIEPK 136 >gi|32267064|ref|NP_861096.1| hypothetical protein HH1565 [Helicobacter hepaticus ATCC 51449] gi|32263116|gb|AAP78162.1| conserved hypothetical protein [Helicobacter hepaticus ATCC 51449] Length = 87 Score = 90.9 bits (224), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 39/81 (48%), Positives = 56/81 (69%) Query: 57 PKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMK 116 PK+YRVLL+ND++T M+FV +L F K + A I LK+H+ G G CG+Y Y+IAE+K Sbjct: 5 PKMYRVLLLNDDWTAMDFVARILMEVFDKTSDEATAITLKIHNDGKGVCGIYTYDIAELK 64 Query: 117 VNQVMNYSRQHQYPLQCIMEQ 137 + V ++QH YPL+ I E+ Sbjct: 65 MQIVSQMAKQHGYPLRVITEE 85 >gi|118602881|ref|YP_904096.1| ATP-dependent Clp protease adaptor protein ClpS [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] gi|118567820|gb|ABL02625.1| ATP-dependent Clp protease adaptor protein ClpS [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] Length = 99 Score = 90.9 bits (224), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 38/77 (49%), Positives = 58/77 (75%) Query: 61 RVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQV 120 +VLL+ND+YT MEFVI VL FF K E A+ MLK+H +G G CG+++Y+IA+ KV QV Sbjct: 20 QVLLLNDDYTTMEFVIDVLVQFFSKSEEAAQATMLKIHIEGEGICGIFSYDIAQTKVTQV 79 Query: 121 MNYSRQHQYPLQCIMEQ 137 + ++R+++ PL C++ + Sbjct: 80 IEFARKNEQPLICVLRE 96 >gi|296273990|ref|YP_003656621.1| ATP-dependent Clp protease adaptor protein ClpS [Arcobacter nitrofigilis DSM 7299] gi|296098164|gb|ADG94114.1| ATP-dependent Clp protease adaptor protein ClpS [Arcobacter nitrofigilis DSM 7299] Length = 99 Score = 90.9 bits (224), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 44/97 (45%), Positives = 62/97 (63%) Query: 42 NCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQG 101 N + E+ +V+ PK Y+VLL+NDNY+ M+FVI +L F K + A IML +H+ G Sbjct: 3 NEFEIELNDDLEVQEPKKYKVLLLNDNYSTMDFVIDILVKIFKKTTDEATVIMLNIHNNG 62 Query: 102 IGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 CG Y +EIA KV QV N +RQ +PL+ IME++ Sbjct: 63 KEVCGTYTHEIASTKVMQVKNLARQKGFPLKAIMEEE 99 >gi|184158341|ref|YP_001846680.1| ATP-dependent Clp protease adaptor protein ClpS [Acinetobacter baumannii ACICU] gi|183209935|gb|ACC57333.1| uncharacterized conserved protein [Acinetobacter baumannii ACICU] Length = 93 Score = 90.9 bits (224), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 41/88 (46%), Positives = 59/88 (67%) Query: 51 SSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAY 110 +++ P LY V+L+ND+YTPM+FVI +LQ +F + + A +ML VH++G G GVY Sbjct: 5 PPELKRPPLYAVVLLNDDYTPMDFVIEILQQYFAMNLDQATQVMLTVHYEGKGTAGVYPR 64 Query: 111 EIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 +IAE K N V NY+R +PL C +E K Sbjct: 65 DIAETKANLVNNYARSQGHPLLCQIEPK 92 >gi|94263020|ref|ZP_01286839.1| ATP-dependent Clp protease adaptor protein ClpS [delta proteobacterium MLMS-1] gi|93456563|gb|EAT06671.1| ATP-dependent Clp protease adaptor protein ClpS [delta proteobacterium MLMS-1] Length = 103 Score = 90.5 bits (223), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 42/85 (49%), Positives = 59/85 (69%) Query: 54 VRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIA 113 +R P LY+VLL ND+YT M+FV+ VL+ F+ D A IM+ VH +G+G GVY + A Sbjct: 19 LRRPPLYKVLLHNDDYTTMDFVVMVLEMVFHHDQAAAHRIMMNVHREGVGVAGVYPRDSA 78 Query: 114 EMKVNQVMNYSRQHQYPLQCIMEQK 138 E KV V N +R+H+YPL+C +EQ+ Sbjct: 79 ETKVAMVHNLARKHEYPLKCSLEQE 103 >gi|24214803|ref|NP_712284.1| ATP-dependent Clp protease adaptor protein ClpS [Leptospira interrogans serovar Lai str. 56601] gi|45657680|ref|YP_001766.1| hypothetical protein LIC11815 [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|37077224|sp|Q8F4D8|CLPS_LEPIN RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|67460336|sp|Q72RD1|CLPS_LEPIC RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|24195812|gb|AAN49302.1| ATP-dependent Clp protease adaptor protein ClpS [Leptospira interrogans serovar Lai str. 56601] gi|45600920|gb|AAS70403.1| conserved hypothetical protein [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 111 Score = 90.5 bits (223), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 41/99 (41%), Positives = 61/99 (61%) Query: 37 IAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLK 96 I FD + + K++ P YRV+++ND++TPMEFV+ +LQ F++ ++ IMLK Sbjct: 4 IFRFDTEEQTLTKEKIKLKKPSKYRVIILNDDFTPMEFVVWILQMVFHRSRAESQQIMLK 63 Query: 97 VHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIM 135 H G CGVY++++A KV QV + QH YPL C M Sbjct: 64 AHITGKALCGVYSHDVARTKVAQVQQLAEQHGYPLHCTM 102 >gi|222824061|ref|YP_002575635.1| ATP-dependent Clp protease adaptor protein ClpS [Campylobacter lari RM2100] gi|222539283|gb|ACM64384.1| ATP-dependent Clp protease adaptor protein ClpS [Campylobacter lari RM2100] Length = 97 Score = 90.1 bits (222), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 43/96 (44%), Positives = 63/96 (65%) Query: 43 CLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGI 102 L +E+ K+ PK+++VLL+ND+ T MEFVI VL N F+ D E A IML++H+QG Sbjct: 2 SLKNEILEQQKLTEPKMFKVLLLNDDITTMEFVIEVLMNIFHHDFEKASAIMLEIHNQGS 61 Query: 103 GECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 G CG+Y EIA K QV ++ + +PLQ +E++ Sbjct: 62 GICGIYTEEIALSKKQQVDLAAKSNNFPLQTRIEEQ 97 >gi|254491965|ref|ZP_05105143.1| ATP-dependent Clp protease adaptor protein ClpS [Methylophaga thiooxidans DMS010] gi|224462780|gb|EEF79051.1| ATP-dependent Clp protease adaptor protein ClpS [Methylophaga thiooxydans DMS010] Length = 75 Score = 90.1 bits (222), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 39/75 (52%), Positives = 55/75 (73%) Query: 64 LVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNY 123 ++ND+YTPM+FV+ VL+N F E A ML+VH +G CG++ YEIAE KV QV +Y Sbjct: 1 MLNDDYTPMDFVVEVLENLFGMGREKATQTMLQVHTEGSALCGIFTYEIAEAKVEQVNSY 60 Query: 124 SRQHQYPLQCIMEQK 138 S++H +PLQC ME++ Sbjct: 61 SQRHGHPLQCTMEEE 75 >gi|116050608|ref|YP_790573.1| ATP-dependent Clp protease adaptor protein ClpS [Pseudomonas aeruginosa UCBPP-PA14] gi|152987145|ref|YP_001347950.1| ATP-dependent Clp protease adaptor protein ClpS [Pseudomonas aeruginosa PA7] gi|296388919|ref|ZP_06878394.1| ATP-dependent Clp protease adaptor protein ClpS [Pseudomonas aeruginosa PAb1] gi|12230856|sp|Q9I0L7|CLPS_PSEAE RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|122259731|sp|Q02NB3|CLPS_PSEAB RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|166214738|sp|A6V4G5|CLPS_PSEA7 RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|115585829|gb|ABJ11844.1| ATP-dependent Clp protease adaptor protein clpS [Pseudomonas aeruginosa UCBPP-PA14] gi|150962303|gb|ABR84328.1| conserved hypothetical protein [Pseudomonas aeruginosa PA7] Length = 122 Score = 89.7 bits (221), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 41/84 (48%), Positives = 58/84 (69%) Query: 54 VRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIA 113 ++ P LY+V+L ND+YTPM+FV+ VL+ FF D E A IML VH QG CG++ ++A Sbjct: 37 LQPPPLYKVVLFNDDYTPMDFVVEVLEVFFNMDREKATKIMLTVHTQGKAVCGLFTRDVA 96 Query: 114 EMKVNQVMNYSRQHQYPLQCIMEQ 137 E K QV Y+R+ Q+PL C +E+ Sbjct: 97 ETKAMQVNQYARESQHPLLCEIEK 120 >gi|307721665|ref|YP_003892805.1| ATP-dependent Clp protease adaptor protein ClpS [Sulfurimonas autotrophica DSM 16294] gi|306979758|gb|ADN09793.1| ATP-dependent Clp protease adaptor protein ClpS [Sulfurimonas autotrophica DSM 16294] Length = 99 Score = 89.7 bits (221), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 40/92 (43%), Positives = 62/92 (67%) Query: 47 EVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECG 106 E+ + ++ PK Y+V L+ND+YT M+FV+ +L + F+K +E A+ IML+VH G CG Sbjct: 8 EIDEDTALKYPKKYKVFLLNDDYTSMDFVVDILMSIFHKSYEQAQDIMLEVHKNDRGLCG 67 Query: 107 VYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 VY YEIAE K+ QV ++ +PL+ ME++ Sbjct: 68 VYTYEIAETKIMQVRRKAKDSGFPLKATMEEE 99 >gi|283850415|ref|ZP_06367704.1| ATP-dependent Clp protease adaptor protein ClpS [Desulfovibrio sp. FW1012B] gi|283574441|gb|EFC22412.1| ATP-dependent Clp protease adaptor protein ClpS [Desulfovibrio sp. FW1012B] Length = 100 Score = 89.7 bits (221), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 42/90 (46%), Positives = 60/90 (66%) Query: 48 VRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGV 107 V VR P+ Y+VLL ND+YT MEFV+ VL F+K+ A IML VH+ G+G CG Sbjct: 10 VDVEEDVREPRRYKVLLHNDDYTTMEFVVQVLVGVFHKNENEATQIMLNVHNNGVGVCGE 69 Query: 108 YAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 + E+AE+KV+ V ++++ YPL+C ME+ Sbjct: 70 FTAEVAELKVSLVHRLAKENGYPLKCSMEE 99 >gi|170722578|ref|YP_001750266.1| ATP-dependent Clp protease adaptor protein ClpS [Pseudomonas putida W619] gi|229889823|sp|B1JBE9|CLPS_PSEPW RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|169760581|gb|ACA73897.1| ATP-dependent Clp protease adaptor protein ClpS [Pseudomonas putida W619] Length = 120 Score = 89.7 bits (221), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 39/84 (46%), Positives = 58/84 (69%) Query: 54 VRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIA 113 ++ P +Y+V+L ND+YTPM+FV+ VL+ FF + E A IML VH +G CG++ +IA Sbjct: 35 LQAPPMYKVVLFNDDYTPMDFVVEVLETFFSLNRELATKIMLTVHTEGRAVCGLFTRDIA 94 Query: 114 EMKVNQVMNYSRQHQYPLQCIMEQ 137 E K QV Y+R+ Q+PL C +E+ Sbjct: 95 ETKAMQVNQYARESQHPLLCEIEK 118 >gi|258546117|ref|ZP_05706351.1| ATP-dependent Clp protease adaptor protein ClpS [Cardiobacterium hominis ATCC 15826] gi|258518542|gb|EEV87401.1| ATP-dependent Clp protease adaptor protein ClpS [Cardiobacterium hominis ATCC 15826] Length = 104 Score = 89.7 bits (221), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 39/79 (49%), Positives = 58/79 (73%) Query: 57 PKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMK 116 P+ Y V+L+ND+YT M+FV+ VL +F K+ A+ IM +VH QG G CG+Y ++IAE K Sbjct: 23 PRQYEVVLLNDDYTTMDFVVDVLMRYFNKNFAEAEDIMYQVHEQGSGVCGIYPFDIAESK 82 Query: 117 VNQVMNYSRQHQYPLQCIM 135 VNQV+ ++R + YPL C++ Sbjct: 83 VNQVIEHARANNYPLLCVL 101 >gi|26990714|ref|NP_746139.1| ATP-dependent Clp protease adaptor protein ClpS [Pseudomonas putida KT2440] gi|148547059|ref|YP_001267161.1| ATP-dependent Clp protease adaptor protein ClpS [Pseudomonas putida F1] gi|167034610|ref|YP_001669841.1| ATP-dependent Clp protease adaptor protein ClpS [Pseudomonas putida GB-1] gi|37077092|sp|Q88FS4|CLPS_PSEPK RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|166214740|sp|A5W1G7|CLPS_PSEP1 RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|189082475|sp|B0KLX7|CLPS_PSEPG RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|24985707|gb|AAN69603.1|AE016593_11 conserved hypothetical protein [Pseudomonas putida KT2440] gi|148511117|gb|ABQ77977.1| ATP-dependent Clp protease adaptor protein ClpS [Pseudomonas putida F1] gi|166861098|gb|ABY99505.1| ATP-dependent Clp protease adaptor protein ClpS [Pseudomonas putida GB-1] Length = 120 Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 39/84 (46%), Positives = 58/84 (69%) Query: 54 VRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIA 113 ++ P +Y+V+L ND+YTPM+FV+ VL+ FF + E A IML VH +G CG++ +IA Sbjct: 35 LQAPPMYKVVLFNDDYTPMDFVVEVLETFFSLNRELATKIMLTVHTEGRAVCGLFTRDIA 94 Query: 114 EMKVNQVMNYSRQHQYPLQCIMEQ 137 E K QV Y+R+ Q+PL C +E+ Sbjct: 95 ETKAMQVNQYARESQHPLLCEIEK 118 >gi|260550322|ref|ZP_05824534.1| substrate modulator for ClpAP [Acinetobacter sp. RUH2624] gi|260406634|gb|EEX00115.1| substrate modulator for ClpAP [Acinetobacter sp. RUH2624] Length = 137 Score = 89.0 bits (219), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 40/88 (45%), Positives = 59/88 (67%) Query: 51 SSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAY 110 +++ P LY V+L+ND+YTPM+FVI +LQ +F + + A +ML VH++G G GVY Sbjct: 49 PPELKRPPLYAVVLLNDDYTPMDFVIEILQQYFAMNLDQATQVMLTVHYEGKGTAGVYPR 108 Query: 111 EIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 +IAE K N V NY+R +PL C ++ K Sbjct: 109 DIAETKANLVNNYARSQGHPLLCQIKPK 136 >gi|330814167|ref|YP_004358406.1| ATP-dependent Clp protease adaptor protein ClpS [Candidatus Pelagibacter sp. IMCC9063] gi|327487262|gb|AEA81667.1| ATP-dependent Clp protease adaptor protein ClpS [Candidatus Pelagibacter sp. IMCC9063] Length = 101 Score = 89.0 bits (219), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 41/90 (45%), Positives = 58/90 (64%) Query: 49 RFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVY 108 + S+K P Y V+L+ND++T MEFVI VL FF + AK +MLK+H G CG Y Sbjct: 12 KLSTKTTKPPYYNVILLNDDFTTMEFVIQVLIIFFKMTNNKAKNVMLKIHEDGSAICGTY 71 Query: 109 AYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 +IA+ + V NY++Q+ +PL+CIME K Sbjct: 72 TKDIAKTLTSLVNNYAKQNLFPLKCIMEVK 101 >gi|325273424|ref|ZP_08139676.1| ATP-dependent Clp protease adaptor protein ClpS [Pseudomonas sp. TJI-51] gi|324101437|gb|EGB99031.1| ATP-dependent Clp protease adaptor protein ClpS [Pseudomonas sp. TJI-51] Length = 120 Score = 89.0 bits (219), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 39/84 (46%), Positives = 58/84 (69%) Query: 54 VRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIA 113 ++ P +Y+V+L ND+YTPM+FV+ VL+ FF + E A IML VH +G CG++ +IA Sbjct: 35 LQAPPMYKVVLFNDDYTPMDFVVEVLETFFSLNRELATKIMLTVHTEGRAVCGLFTRDIA 94 Query: 114 EMKVNQVMNYSRQHQYPLQCIMEQ 137 E K QV Y+R+ Q+PL C +E+ Sbjct: 95 ETKAMQVNQYARESQHPLLCEIEK 118 >gi|262279297|ref|ZP_06057082.1| substrate modulator for ClpAP [Acinetobacter calcoaceticus RUH2202] gi|293607903|ref|ZP_06690206.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|299769891|ref|YP_003731917.1| ATP-dependent Clp protease adaptor protein ClpS [Acinetobacter sp. DR1] gi|262259648|gb|EEY78381.1| substrate modulator for ClpAP [Acinetobacter calcoaceticus RUH2202] gi|292828476|gb|EFF86838.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|298699979|gb|ADI90544.1| ATP-dependent Clp protease adaptor protein ClpS [Acinetobacter sp. DR1] gi|325122454|gb|ADY81977.1| ATP-dependent Clp protease adaptor protein ClpS [Acinetobacter calcoaceticus PHEA-2] Length = 137 Score = 89.0 bits (219), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 41/88 (46%), Positives = 59/88 (67%) Query: 51 SSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAY 110 +++ P LY V+L+ND+YTPM+FVI +LQ +F + + A +ML VH++G G GVY Sbjct: 49 PPELKRPPLYAVVLMNDDYTPMDFVIEILQQYFAMNLDQATQVMLTVHYEGKGIAGVYPR 108 Query: 111 EIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 +IAE K N V NY+R +PL C +E K Sbjct: 109 DIAETKANLVNNYARSQGHPLLCQIEPK 136 >gi|320323776|gb|EFW79860.1| ATP-dependent Clp protease adaptor protein ClpS [Pseudomonas syringae pv. glycinea str. B076] gi|320327916|gb|EFW83921.1| ATP-dependent Clp protease adaptor protein ClpS [Pseudomonas syringae pv. glycinea str. race 4] gi|330881201|gb|EGH15350.1| ATP-dependent Clp protease adaptor protein ClpS [Pseudomonas syringae pv. glycinea str. race 4] Length = 120 Score = 89.0 bits (219), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 39/84 (46%), Positives = 58/84 (69%) Query: 54 VRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIA 113 +R P +Y+V+L ND+YTPM+FV+ VL+ FF + E A +ML VH +G CG++ +IA Sbjct: 35 LRAPPMYKVVLFNDDYTPMDFVVEVLEVFFNLNRELATKVMLAVHTEGRAVCGLFTRDIA 94 Query: 114 EMKVNQVMNYSRQHQYPLQCIMEQ 137 E K QV Y+R+ Q+PL C +E+ Sbjct: 95 ETKAMQVNQYARESQHPLLCEIEK 118 >gi|253828028|ref|ZP_04870913.1| ATP-dependent Clp protease adaptor protein ClpS [Helicobacter canadensis MIT 98-5491] gi|253511434|gb|EES90093.1| ATP-dependent Clp protease adaptor protein ClpS [Helicobacter canadensis MIT 98-5491] Length = 101 Score = 89.0 bits (219), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 39/96 (40%), Positives = 64/96 (66%) Query: 42 NCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQG 101 N +++ K++ P Y+V+L+ND+YT +FVI +LQ F+K E + +ML++HH G Sbjct: 5 NQIENATETLEKLQEPIRYKVILLNDDYTTQDFVIEILQKVFHKGFEESLNLMLQIHHNG 64 Query: 102 IGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 G CG+Y Y+IAE K QV +++ Q+PL+ I+E+ Sbjct: 65 RGMCGIYPYDIAETKAMQVRKMAKEKQFPLRAILEK 100 >gi|320537709|ref|ZP_08037635.1| ATP-dependent Clp protease adaptor protein ClpS [Treponema phagedenis F0421] gi|320145446|gb|EFW37136.1| ATP-dependent Clp protease adaptor protein ClpS [Treponema phagedenis F0421] Length = 120 Score = 89.0 bits (219), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 39/95 (41%), Positives = 64/95 (67%) Query: 44 LDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIG 103 ++S V K++ P YRVLL+ND+ T M+FVI +L F+K+++ A+ IML +H QG G Sbjct: 26 IESTVLIKEKIKEPGFYRVLLLNDDITTMDFVISILIEVFHKNYKEAEIIMLTIHTQGSG 85 Query: 104 ECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 G Y Y+IA + +V ++++ +PL+CIME++ Sbjct: 86 LVGTYTYDIAATRCKKVEMLAQENGFPLKCIMEKE 120 >gi|224369760|ref|YP_002603924.1| ClpS [Desulfobacterium autotrophicum HRM2] gi|259491245|sp|C0QI24|CLPS_DESAH RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|223692477|gb|ACN15760.1| ClpS [Desulfobacterium autotrophicum HRM2] Length = 104 Score = 88.6 bits (218), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 45/94 (47%), Positives = 59/94 (62%), Gaps = 4/94 (4%) Query: 49 RFSSKVR----VPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGE 104 R SSKV P +YRV+L ND+YT MEFV+ +L F K E A IML +H QG G Sbjct: 11 RTSSKVEKKEGYPPMYRVVLHNDDYTTMEFVVQILITVFGKSLEKASIIMLNIHKQGKGI 70 Query: 105 CGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 CG Y E+AE KVN V + +R+ +PL+ ME++ Sbjct: 71 CGSYTREVAETKVNTVHHLAREQGFPLKSTMEKE 104 >gi|149919976|ref|ZP_01908451.1| ATP-dependent Clp protease adaptor protein clpS [Plesiocystis pacifica SIR-1] gi|149819249|gb|EDM78683.1| ATP-dependent Clp protease adaptor protein clpS [Plesiocystis pacifica SIR-1] Length = 113 Score = 88.6 bits (218), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 47/112 (41%), Positives = 68/112 (60%), Gaps = 9/112 (8%) Query: 27 MADSRMN--KKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFY 84 M+D R + ++G+A + R K + P++YRVLL ND+YTPM+FV+ +LQ F Sbjct: 1 MSDKRKDDPQRGVA-------LKTRDERKSKRPRMYRVLLHNDDYTPMDFVVRLLQTVFR 53 Query: 85 KDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIME 136 A IML VH++G+G GV+ +EIAE KV Q +RQ++ PL ME Sbjct: 54 HSEGRATEIMLHVHNKGVGVAGVFTHEIAETKVAQTHMLARQNECPLMASME 105 >gi|319956042|ref|YP_004167305.1| ATP-dependent clp protease adaptor protein clps [Nitratifractor salsuginis DSM 16511] gi|319418446|gb|ADV45556.1| ATP-dependent Clp protease adaptor protein ClpS [Nitratifractor salsuginis DSM 16511] Length = 99 Score = 88.6 bits (218), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 43/80 (53%), Positives = 55/80 (68%) Query: 57 PKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMK 116 P+LYRV+L ND+YT MEFVI VL++ F+K A+ IM VH +G CGVY YEIAE K Sbjct: 17 PELYRVILHNDDYTTMEFVIDVLRSIFHKSTREAEEIMWTVHEKGQAVCGVYTYEIAETK 76 Query: 117 VNQVMNYSRQHQYPLQCIME 136 V QV +RQ+ +PL +E Sbjct: 77 VEQVKLKARQNGFPLLATLE 96 >gi|104781332|ref|YP_607830.1| ATP-dependent Clp protease adaptor protein ClpS [Pseudomonas entomophila L48] gi|95110319|emb|CAK15026.1| ATP-dependent Clp protease adaptor protein clpS [Pseudomonas entomophila L48] Length = 124 Score = 88.6 bits (218), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 39/84 (46%), Positives = 58/84 (69%) Query: 54 VRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIA 113 ++ P +Y+V+L ND+YTPM+FV+ VL+ FF + E A IML VH +G CG++ +IA Sbjct: 39 LQAPPMYKVVLFNDDYTPMDFVVEVLETFFNLNRELATKIMLTVHTEGRAVCGLFTRDIA 98 Query: 114 EMKVNQVMNYSRQHQYPLQCIMEQ 137 E K QV Y+R+ Q+PL C +E+ Sbjct: 99 ETKAMQVNQYARESQHPLLCEIEK 122 >gi|264678276|ref|YP_003278183.1| ATP-dependent Clp protease adaptor protein ClpS [Comamonas testosteroni CNB-2] gi|299533529|ref|ZP_07046906.1| ATP-dependent Clp protease adaptor protein ClpS [Comamonas testosteroni S44] gi|262208789|gb|ACY32887.1| ATP-dependent Clp protease adaptor protein ClpS [Comamonas testosteroni CNB-2] gi|298718487|gb|EFI59467.1| ATP-dependent Clp protease adaptor protein ClpS [Comamonas testosteroni S44] Length = 95 Score = 88.6 bits (218), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 39/78 (50%), Positives = 56/78 (71%) Query: 59 LYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVN 118 +Y+V+++ND++TPMEFVI VLQ F KD E+A IMLK+H G G CGVY+ ++A KV Sbjct: 15 MYQVVMLNDDFTPMEFVIAVLQELFGKDRESATQIMLKIHLDGRGVCGVYSQDVAATKVE 74 Query: 119 QVMNYSRQHQYPLQCIME 136 QV+ +++ +PLQ E Sbjct: 75 QVLQAAQKAGHPLQATFE 92 >gi|330875785|gb|EGH09934.1| ATP-dependent Clp protease adaptor protein ClpS [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 120 Score = 88.6 bits (218), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 38/84 (45%), Positives = 58/84 (69%) Query: 54 VRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIA 113 ++ P +Y+V+L ND+YTPM+FV+ VL+ FF + E A +ML VH +G CG++ +IA Sbjct: 35 LQAPPMYKVVLFNDDYTPMDFVVEVLEAFFNLNRELATKVMLAVHTEGRAVCGLFTRDIA 94 Query: 114 EMKVNQVMNYSRQHQYPLQCIMEQ 137 E K QV Y+R+ Q+PL C +E+ Sbjct: 95 ETKAAQVNQYARESQHPLLCEIEK 118 >gi|114771314|ref|ZP_01448734.1| ATP-dependent Clp protease, adaptor protein ClpS [alpha proteobacterium HTCC2255] gi|114548239|gb|EAU51126.1| ATP-dependent Clp protease, adaptor protein ClpS [alpha proteobacterium HTCC2255] Length = 120 Score = 88.2 bits (217), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 37/80 (46%), Positives = 60/80 (75%) Query: 59 LYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVN 118 +Y+V+L+ND+YTPMEFV+H+L+ +F A +M+ VH +G+ GV++++IAE KV Sbjct: 41 MYKVILLNDDYTPMEFVVHILERYFGTTGSQAYELMMLVHQKGLAVVGVFSHDIAETKVM 100 Query: 119 QVMNYSRQHQYPLQCIMEQK 138 QV +++HQ+PLQC ME++ Sbjct: 101 QVTELAQKHQHPLQCTMEKE 120 >gi|116747493|ref|YP_844180.1| ATP-dependent Clp protease adaptor protein ClpS [Syntrophobacter fumaroxidans MPOB] gi|116696557|gb|ABK15745.1| ATP-dependent Clp protease adaptor protein ClpS [Syntrophobacter fumaroxidans MPOB] Length = 80 Score = 88.2 bits (217), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 41/79 (51%), Positives = 55/79 (69%) Query: 59 LYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVN 118 +YRVLL ND+YT MEFV+ +LQ+ F+K A IML VH G G CGV+ E+AE KV Sbjct: 1 MYRVLLHNDDYTTMEFVVEILQSVFHKSPSEATRIMLLVHKSGTGVCGVFTAEVAETKVE 60 Query: 119 QVMNYSRQHQYPLQCIMEQ 137 V + +R++ +PLQC ME+ Sbjct: 61 LVHHLARKNGFPLQCSMEE 79 >gi|256829859|ref|YP_003158587.1| ATP-dependent Clp protease adaptor protein ClpS [Desulfomicrobium baculatum DSM 4028] gi|256579035|gb|ACU90171.1| ATP-dependent Clp protease adaptor protein ClpS [Desulfomicrobium baculatum DSM 4028] Length = 104 Score = 88.2 bits (217), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 39/93 (41%), Positives = 59/93 (63%) Query: 45 DSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGE 104 D ++ +++ P+ ++VLL ND+YT M+FV+ VL N F K + IM+ VH +GIG Sbjct: 11 DPDIMVEDQLQEPRQFKVLLHNDDYTSMDFVVEVLMNVFGKSESESFAIMMSVHEKGIGL 70 Query: 105 CGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 CG+Y E+AE KV V +R +PL+C ME+ Sbjct: 71 CGIYTAEVAETKVQLVHQMARARSFPLRCSMEE 103 >gi|317153522|ref|YP_004121570.1| ATP-dependent Clp protease adaptor protein ClpS [Desulfovibrio aespoeensis Aspo-2] gi|316943773|gb|ADU62824.1| ATP-dependent Clp protease adaptor protein ClpS [Desulfovibrio aespoeensis Aspo-2] Length = 104 Score = 88.2 bits (217), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 42/84 (50%), Positives = 54/84 (64%) Query: 53 KVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEI 112 +VR P+ Y+VLL ND+YT M+FVI VL F K A IML VH++G G CG Y E+ Sbjct: 19 EVREPRKYKVLLHNDDYTTMDFVIEVLVRVFRKSEAQAMAIMLAVHNEGYGVCGTYTAEV 78 Query: 113 AEMKVNQVMNYSRQHQYPLQCIME 136 AE KV+ V +R +PL+C ME Sbjct: 79 AETKVDMVHRLARSAGFPLKCSME 102 >gi|330810450|ref|YP_004354912.1| ATP-dependent Clp protease adapter protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327378558|gb|AEA69908.1| ATP-dependent Clp protease adapter protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 120 Score = 87.8 bits (216), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 39/84 (46%), Positives = 58/84 (69%) Query: 54 VRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIA 113 ++ P +Y+V+L ND+YTPM+FV+ VL+ FF + E A +ML VH +G CGV+ +IA Sbjct: 35 LQAPPMYKVVLFNDDYTPMDFVVEVLEVFFNLNRELATKVMLAVHTEGRAVCGVFTRDIA 94 Query: 114 EMKVNQVMNYSRQHQYPLQCIMEQ 137 E K QV Y+R+ Q+PL C +E+ Sbjct: 95 ETKAMQVNQYARESQHPLLCEIEK 118 >gi|77459813|ref|YP_349320.1| ATP-dependent Clp protease adaptor protein ClpS [Pseudomonas fluorescens Pf0-1] gi|77383816|gb|ABA75329.1| ATP-dependent clp protease adaptor protein [Pseudomonas fluorescens Pf0-1] Length = 127 Score = 87.8 bits (216), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 39/84 (46%), Positives = 58/84 (69%) Query: 54 VRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIA 113 ++ P +Y+V+L ND+YTPM+FV+ VL+ FF + E A +ML VH +G CGV+ +IA Sbjct: 42 LQAPPMYKVVLFNDDYTPMDFVVEVLEVFFNLNRELATKVMLAVHTEGRAVCGVFTRDIA 101 Query: 114 EMKVNQVMNYSRQHQYPLQCIMEQ 137 E K QV Y+R+ Q+PL C +E+ Sbjct: 102 ETKAMQVNQYARESQHPLLCEIEK 125 >gi|312961674|ref|ZP_07776172.1| ATP-dependent Clp protease adapter protein [Pseudomonas fluorescens WH6] gi|311283933|gb|EFQ62516.1| ATP-dependent Clp protease adapter protein [Pseudomonas fluorescens WH6] Length = 122 Score = 87.8 bits (216), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 39/84 (46%), Positives = 58/84 (69%) Query: 54 VRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIA 113 ++ P +Y+V+L ND+YTPM+FV+ VL+ FF + E A +ML VH +G CGV+ +IA Sbjct: 37 LQAPPMYKVVLFNDDYTPMDFVVEVLEVFFNLNRELATKVMLAVHTEGRAVCGVFTRDIA 96 Query: 114 EMKVNQVMNYSRQHQYPLQCIMEQ 137 E K QV Y+R+ Q+PL C +E+ Sbjct: 97 ETKAMQVNQYARESQHPLLCEIEK 120 >gi|326538898|gb|ADZ87113.1| ATP-dependent Clp protease adaptor protein ClpS [Brucella melitensis M5-90] Length = 63 Score = 87.8 bits (216), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 38/63 (60%), Positives = 53/63 (84%) Query: 76 IHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIM 135 +HVLQ FF K+ + A IML VH+ G+GECGV+ YE+AE KV+QVM+++RQ+Q+PLQC+M Sbjct: 1 MHVLQRFFQKNLDDATRIMLHVHNHGVGECGVFTYEVAETKVSQVMDFARQNQHPLQCVM 60 Query: 136 EQK 138 E+K Sbjct: 61 EKK 63 >gi|229591241|ref|YP_002873360.1| ATP-dependent Clp protease adaptor protein ClpS [Pseudomonas fluorescens SBW25] gi|259491249|sp|C3JY63|CLPS_PSEFS RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|229363107|emb|CAY50115.1| ATP-dependent clp protease adaptor protein [Pseudomonas fluorescens SBW25] Length = 122 Score = 87.8 bits (216), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 39/84 (46%), Positives = 58/84 (69%) Query: 54 VRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIA 113 ++ P +Y+V+L ND+YTPM+FV+ VL+ FF + E A +ML VH +G CGV+ +IA Sbjct: 37 LQAPPMYKVVLFNDDYTPMDFVVEVLEVFFNLNRELATKVMLAVHTEGRAVCGVFTRDIA 96 Query: 114 EMKVNQVMNYSRQHQYPLQCIMEQ 137 E K QV Y+R+ Q+PL C +E+ Sbjct: 97 ETKAMQVNQYARESQHPLLCEIEK 120 >gi|28870518|ref|NP_793137.1| hypothetical protein PSPTO_3354 [Pseudomonas syringae pv. tomato str. DC3000] gi|213970047|ref|ZP_03398179.1| hypothetical protein PSPTOT1_5283 [Pseudomonas syringae pv. tomato T1] gi|301381402|ref|ZP_07229820.1| ATP-dependent Clp protease adaptor protein ClpS [Pseudomonas syringae pv. tomato Max13] gi|302058400|ref|ZP_07249941.1| ATP-dependent Clp protease adaptor protein ClpS [Pseudomonas syringae pv. tomato K40] gi|302130351|ref|ZP_07256341.1| ATP-dependent Clp protease adaptor protein ClpS [Pseudomonas syringae pv. tomato NCPPB 1108] gi|37077076|sp|Q87ZS0|CLPS_PSESM RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|28853766|gb|AAO56832.1| conserved protein of unknown function [Pseudomonas syringae pv. tomato str. DC3000] gi|213925151|gb|EEB58714.1| hypothetical protein PSPTOT1_5283 [Pseudomonas syringae pv. tomato T1] gi|330965608|gb|EGH65868.1| ATP-dependent Clp protease adaptor protein ClpS [Pseudomonas syringae pv. actinidiae str. M302091] gi|331017259|gb|EGH97315.1| ATP-dependent Clp protease adaptor protein ClpS [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 120 Score = 87.4 bits (215), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 38/84 (45%), Positives = 58/84 (69%) Query: 54 VRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIA 113 ++ P +Y+V+L ND+YTPM+FV+ VL+ FF + E A +ML VH +G CG++ +IA Sbjct: 35 LQAPPMYKVVLFNDDYTPMDFVVEVLEVFFNLNRELATKVMLAVHTEGRAVCGLFTRDIA 94 Query: 114 EMKVNQVMNYSRQHQYPLQCIMEQ 137 E K QV Y+R+ Q+PL C +E+ Sbjct: 95 ETKAAQVNQYARESQHPLLCEIEK 118 >gi|238020305|ref|ZP_04600731.1| hypothetical protein GCWU000324_00183 [Kingella oralis ATCC 51147] gi|237867285|gb|EEP68291.1| hypothetical protein GCWU000324_00183 [Kingella oralis ATCC 51147] Length = 101 Score = 87.4 bits (215), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 45/96 (46%), Positives = 59/96 (61%), Gaps = 2/96 (2%) Query: 44 LDSEVRFSSKVRV--PKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQG 101 L R S K ++ PK Y V L+ND+YTPM+FV+ VLQ+ F A IML+VHH G Sbjct: 3 LHQATRQSQKTQLAPPKKYGVFLLNDHYTPMDFVVDVLQDVFRLPESKAVSIMLEVHHHG 62 Query: 102 IGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 G CGVY +IAE K QVM + + +PL C +E+ Sbjct: 63 KGLCGVYTRDIAETKQQQVMQLADEAGHPLMCTIEE 98 >gi|242309928|ref|ZP_04809083.1| ATP-dependent Clp protease adapter protein clpS [Helicobacter pullorum MIT 98-5489] gi|239523225|gb|EEQ63091.1| ATP-dependent Clp protease adapter protein clpS [Helicobacter pullorum MIT 98-5489] Length = 101 Score = 87.4 bits (215), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 38/81 (46%), Positives = 57/81 (70%) Query: 57 PKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMK 116 P Y+V+L+ND+YT +FVI VLQ F+KD E + +ML++HH G G CG+Y Y+IAE K Sbjct: 20 PIRYKVILLNDDYTTQDFVIEVLQKVFHKDFEASLNLMLQIHHNGRGMCGIYPYDIAETK 79 Query: 117 VNQVMNYSRQHQYPLQCIMEQ 137 +V ++ Q+PL+ I+E+ Sbjct: 80 ALEVRKMAKAKQFPLRAILEK 100 >gi|194098152|ref|YP_002001200.1| ATP-dependent Clp protease adaptor protein ClpS [Neisseria gonorrhoeae NCCP11945] gi|291044246|ref|ZP_06569955.1| ATP-dependent Clp protease adapter protein clpS [Neisseria gonorrhoeae DGI2] gi|293399443|ref|ZP_06643596.1| ATP-dependent Clp protease adaptor protein ClpS [Neisseria gonorrhoeae F62] gi|193933442|gb|ACF29266.1| ATP-dependent Clp protease adapter protein clpS [Neisseria gonorrhoeae NCCP11945] gi|291011140|gb|EFE03136.1| ATP-dependent Clp protease adapter protein clpS [Neisseria gonorrhoeae DGI2] gi|291610012|gb|EFF39134.1| ATP-dependent Clp protease adaptor protein ClpS [Neisseria gonorrhoeae F62] gi|317163877|gb|ADV07418.1| ATP-dependent Clp protease adaptor protein ClpS [Neisseria gonorrhoeae TCDC-NG08107] Length = 137 Score = 87.4 bits (215), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 39/81 (48%), Positives = 52/81 (64%) Query: 57 PKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMK 116 PK Y V L+ND+YT MEFV+ +L F E A +ML VHH+G G CG Y +IA+ K Sbjct: 56 PKRYGVFLLNDDYTTMEFVVEILTEIFMLGQEQAVAVMLSVHHEGKGLCGTYTRDIAQTK 115 Query: 117 VNQVMNYSRQHQYPLQCIMEQ 137 QVM ++ +PLQCI+E+ Sbjct: 116 QQQVMQRAKAEGHPLQCIVEE 136 >gi|224372651|ref|YP_002607023.1| ATP-dependent Clp protease adaptor protein ClpS [Nautilia profundicola AmH] gi|254763821|sp|B9L8R5|CLPS_NAUPA RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|223589176|gb|ACM92912.1| ATP-dependent Clp protease adaptor protein ClpS [Nautilia profundicola AmH] Length = 97 Score = 87.0 bits (214), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 38/81 (46%), Positives = 56/81 (69%) Query: 57 PKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMK 116 PKLY+V+L+ND+YT +FVI +L+ F+K+ E A I LKV +G GVY YEIA++K Sbjct: 16 PKLYKVMLLNDDYTTFDFVIEILKTVFHKNEEEAINITLKVDREGSAAVGVYPYEIAQVK 75 Query: 117 VNQVMNYSRQHQYPLQCIMEQ 137 + + +RQ YPL+ +ME+ Sbjct: 76 IEKTHTLARQAGYPLRAVMEE 96 >gi|313668693|ref|YP_004048977.1| atp-dependent Clp protease adaptor protein ClpS [Neisseria lactamica ST-640] gi|313006155|emb|CBN87616.1| atp-dependent Clp protease adaptor protein ClpS [Neisseria lactamica 020-06] Length = 128 Score = 87.0 bits (214), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 39/81 (48%), Positives = 53/81 (65%) Query: 57 PKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMK 116 PK Y V L+ND+YT MEFV+ +L F E A +ML VHH+G G CG Y +IA+ K Sbjct: 47 PKRYGVFLLNDDYTTMEFVVEILTEIFMLGQEQAVAVMLLVHHEGKGLCGTYTRDIAQTK 106 Query: 117 VNQVMNYSRQHQYPLQCIMEQ 137 QVM+ ++ +PLQCI+E+ Sbjct: 107 QRQVMDRAKAEGHPLQCIIEE 127 >gi|317487405|ref|ZP_07946193.1| ATP-dependent Clp protease adaptor protein ClpS [Bilophila wadsworthia 3_1_6] gi|316921337|gb|EFV42635.1| ATP-dependent Clp protease adaptor protein ClpS [Bilophila wadsworthia 3_1_6] Length = 108 Score = 87.0 bits (214), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 42/92 (45%), Positives = 61/92 (66%) Query: 46 SEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGEC 105 +V +V PK+Y+VLL ND+YT MEFV+++L F+K + A IML VH +G G Sbjct: 14 PDVIMDVEVAEPKMYQVLLHNDDYTTMEFVVNILMTVFHKTADQATNIMLAVHKRGKGIA 73 Query: 106 GVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 GVY +EIAE KV++ +R+ YPL+C +E+ Sbjct: 74 GVYPHEIAETKVDKTHFLAREAGYPLRCTLEE 105 >gi|70731245|ref|YP_260986.1| ATP-dependent Clp protease adaptor protein ClpS [Pseudomonas fluorescens Pf-5] gi|123654447|sp|Q4K9U7|CLPS_PSEF5 RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|68345544|gb|AAY93150.1| ATP-dependent Clp protease adaptor protein ClpS [Pseudomonas fluorescens Pf-5] Length = 120 Score = 87.0 bits (214), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 38/84 (45%), Positives = 58/84 (69%) Query: 54 VRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIA 113 ++ P +Y+V+L ND+YTPM+FV+ VL+ FF + E A +ML VH +G CG++ +IA Sbjct: 35 LQAPPMYKVVLFNDDYTPMDFVVEVLEMFFNLNRELATKVMLAVHTEGRAVCGLFTRDIA 94 Query: 114 EMKVNQVMNYSRQHQYPLQCIMEQ 137 E K QV Y+R+ Q+PL C +E+ Sbjct: 95 ETKAMQVNQYARESQHPLLCEIEK 118 >gi|71735262|ref|YP_275268.1| ATP-dependent Clp protease adaptor protein ClpS [Pseudomonas syringae pv. phaseolicola 1448A] gi|257485425|ref|ZP_05639466.1| ATP-dependent Clp protease adaptor protein ClpS [Pseudomonas syringae pv. tabaci ATCC 11528] gi|289625413|ref|ZP_06458367.1| ATP-dependent Clp protease adaptor protein ClpS [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289649304|ref|ZP_06480647.1| ATP-dependent Clp protease adaptor protein ClpS [Pseudomonas syringae pv. aesculi str. 2250] gi|298487537|ref|ZP_07005579.1| ATP-dependent Clp protease adaptor protein clpS [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|123635959|sp|Q48H65|CLPS_PSE14 RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|71555815|gb|AAZ35026.1| ATP-dependent Clp protease adaptor protein clpS [Pseudomonas syringae pv. phaseolicola 1448A] gi|298157921|gb|EFH98999.1| ATP-dependent Clp protease adaptor protein clpS [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|330866850|gb|EGH01559.1| ATP-dependent Clp protease adaptor protein ClpS [Pseudomonas syringae pv. aesculi str. 0893_23] gi|330889671|gb|EGH22332.1| ATP-dependent Clp protease adaptor protein ClpS [Pseudomonas syringae pv. mori str. 301020] gi|331010739|gb|EGH90795.1| ATP-dependent Clp protease adaptor protein ClpS [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 120 Score = 87.0 bits (214), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 38/84 (45%), Positives = 58/84 (69%) Query: 54 VRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIA 113 ++ P +Y+V+L ND+YTPM+FV+ VL+ FF + E A +ML VH +G CG++ +IA Sbjct: 35 LQAPPMYKVVLFNDDYTPMDFVVEVLEVFFNLNRELATKVMLAVHTEGRAVCGLFTRDIA 94 Query: 114 EMKVNQVMNYSRQHQYPLQCIMEQ 137 E K QV Y+R+ Q+PL C +E+ Sbjct: 95 ETKAMQVNQYARESQHPLLCEIEK 118 >gi|89092941|ref|ZP_01165893.1| ATP-dependent Clp protease adaptor protein ClpS [Oceanospirillum sp. MED92] gi|89082966|gb|EAR62186.1| ATP-dependent Clp protease adaptor protein ClpS [Oceanospirillum sp. MED92] Length = 120 Score = 87.0 bits (214), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 38/85 (44%), Positives = 58/85 (68%) Query: 53 KVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEI 112 +++ P +YRV+L+ND+YTPM+FV+ VL FF D E A +ML VH QG G CG++ ++ Sbjct: 35 ELKKPSMYRVVLMNDDYTPMDFVVAVLMMFFSMDQEKATQVMLAVHTQGKGVCGIFTRDV 94 Query: 113 AEMKVNQVMNYSRQHQYPLQCIMEQ 137 A+ K V Y+R + +PL C +E+ Sbjct: 95 ADTKAAIVNQYARDNSHPLLCEVEK 119 >gi|237800558|ref|ZP_04589019.1| ATP-dependent Clp protease adaptor protein ClpS [Pseudomonas syringae pv. oryzae str. 1_6] gi|330958173|gb|EGH58433.1| ATP-dependent Clp protease adaptor protein ClpS [Pseudomonas syringae pv. maculicola str. ES4326] gi|331023418|gb|EGI03475.1| ATP-dependent Clp protease adaptor protein ClpS [Pseudomonas syringae pv. oryzae str. 1_6] Length = 120 Score = 87.0 bits (214), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 38/84 (45%), Positives = 58/84 (69%) Query: 54 VRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIA 113 ++ P +Y+V+L ND+YTPM+FV+ VL+ FF + E A +ML VH +G CG++ +IA Sbjct: 35 LQAPPMYKVVLFNDDYTPMDFVVEVLEVFFNLNRELATKVMLAVHTEGRAVCGLFTRDIA 94 Query: 114 EMKVNQVMNYSRQHQYPLQCIMEQ 137 E K QV Y+R+ Q+PL C +E+ Sbjct: 95 ETKAMQVNQYARESQHPLLCEIEK 118 >gi|218193695|gb|EEC76122.1| hypothetical protein OsI_13390 [Oryza sativa Indica Group] Length = 3986 Score = 87.0 bits (214), Expect = 8e-16, Method: Composition-based stats. Identities = 39/76 (51%), Positives = 54/76 (71%) Query: 49 RFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVY 108 R + + + P++Y+V+++ND+YTPMEFVI VLQ FF KD E A IMLK+H G G CGVY Sbjct: 3597 RRTQRTQPPQMYQVVMLNDDYTPMEFVIVVLQEFFGKDREAATQIMLKIHLDGKGVCGVY 3656 Query: 109 AYEIAEMKVNQVMNYS 124 + ++A KV Q + S Sbjct: 3657 SRDVAATKVEQELEVS 3672 >gi|66046413|ref|YP_236254.1| ATP-dependent Clp protease adaptor protein ClpS [Pseudomonas syringae pv. syringae B728a] gi|302185010|ref|ZP_07261683.1| ATP-dependent Clp protease adaptor protein ClpS [Pseudomonas syringae pv. syringae 642] gi|75501532|sp|Q4ZRK6|CLPS_PSEU2 RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|63257120|gb|AAY38216.1| ATP-dependent Clp protease adaptor protein ClpS [Pseudomonas syringae pv. syringae B728a] gi|330972894|gb|EGH72960.1| ATP-dependent Clp protease adaptor protein ClpS [Pseudomonas syringae pv. aceris str. M302273PT] Length = 120 Score = 87.0 bits (214), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 38/84 (45%), Positives = 58/84 (69%) Query: 54 VRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIA 113 ++ P +Y+V+L ND+YTPM+FV+ VL+ FF + E A +ML VH +G CG++ +IA Sbjct: 35 LQAPPMYKVVLFNDDYTPMDFVVEVLEVFFNLNRELATKVMLAVHTEGRAVCGLFTRDIA 94 Query: 114 EMKVNQVMNYSRQHQYPLQCIMEQ 137 E K QV Y+R+ Q+PL C +E+ Sbjct: 95 ETKAMQVNQYARESQHPLLCEIEK 118 >gi|330900612|gb|EGH32031.1| ATP-dependent Clp protease adaptor protein ClpS [Pseudomonas syringae pv. japonica str. M301072PT] gi|330940301|gb|EGH43421.1| ATP-dependent Clp protease adaptor protein ClpS [Pseudomonas syringae pv. pisi str. 1704B] gi|330981384|gb|EGH79487.1| ATP-dependent Clp protease adaptor protein ClpS [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 120 Score = 87.0 bits (214), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 38/84 (45%), Positives = 58/84 (69%) Query: 54 VRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIA 113 ++ P +Y+V+L ND+YTPM+FV+ VL+ FF + E A +ML VH +G CG++ +IA Sbjct: 35 LQAPPMYKVVLFNDDYTPMDFVVEVLEVFFNLNRELATKVMLAVHTEGRAVCGLFTRDIA 94 Query: 114 EMKVNQVMNYSRQHQYPLQCIMEQ 137 E K QV Y+R+ Q+PL C +E+ Sbjct: 95 ETKAMQVNQYARESQHPLLCEIEK 118 >gi|255527633|ref|ZP_05394494.1| ATP-dependent Clp protease adaptor protein ClpS [Clostridium carboxidivorans P7] gi|296185311|ref|ZP_06853721.1| ATP-dependent Clp protease adaptor protein ClpS [Clostridium carboxidivorans P7] gi|255508675|gb|EET85054.1| ATP-dependent Clp protease adaptor protein ClpS [Clostridium carboxidivorans P7] gi|296050145|gb|EFG89569.1| ATP-dependent Clp protease adaptor protein ClpS [Clostridium carboxidivorans P7] Length = 99 Score = 86.7 bits (213), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 38/86 (44%), Positives = 57/86 (66%) Query: 53 KVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEI 112 K+R PK+Y+V++ ND+YT MEFV+ +L F K A IM VH GIG G+Y+Y+I Sbjct: 14 KIRKPKMYKVIIYNDDYTTMEFVVKILIEIFKKSVVEATKIMYDVHRSGIGIAGIYSYDI 73 Query: 113 AEMKVNQVMNYSRQHQYPLQCIMEQK 138 A K+ Q M+ SR+ +PL+ +E++ Sbjct: 74 AATKITQAMSASRESGFPLKFSIEEE 99 >gi|327480905|gb|AEA84215.1| ATP-dependent Clp protease adaptor protein ClpS [Pseudomonas stutzeri DSM 4166] Length = 122 Score = 86.7 bits (213), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 38/86 (44%), Positives = 57/86 (66%) Query: 52 SKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYE 111 +++ P +Y+V++ ND+YTPM+FV+ VL+ F E A IML VH +G CGVY + Sbjct: 35 PQLKAPPMYKVVMFNDDYTPMDFVVEVLEGIFNHSREQATKIMLAVHTEGQAVCGVYTRD 94 Query: 112 IAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +AE K QV Y+R+ Q+PL C +E+ Sbjct: 95 VAETKAMQVNQYARECQHPLLCEIEK 120 >gi|239998603|ref|ZP_04718527.1| ATP-dependent Clp protease adaptor protein ClpS [Neisseria gonorrhoeae 35/02] gi|240013726|ref|ZP_04720639.1| ATP-dependent Clp protease adaptor protein ClpS [Neisseria gonorrhoeae DGI18] gi|240016164|ref|ZP_04722704.1| ATP-dependent Clp protease adaptor protein ClpS [Neisseria gonorrhoeae FA6140] gi|240080308|ref|ZP_04724851.1| ATP-dependent Clp protease adaptor protein ClpS [Neisseria gonorrhoeae FA19] gi|240112519|ref|ZP_04727009.1| ATP-dependent Clp protease adaptor protein ClpS [Neisseria gonorrhoeae MS11] gi|240115259|ref|ZP_04729321.1| ATP-dependent Clp protease adaptor protein ClpS [Neisseria gonorrhoeae PID18] gi|240117546|ref|ZP_04731608.1| ATP-dependent Clp protease adaptor protein ClpS [Neisseria gonorrhoeae PID1] gi|240120796|ref|ZP_04733758.1| ATP-dependent Clp protease adaptor protein ClpS [Neisseria gonorrhoeae PID24-1] gi|240123101|ref|ZP_04736057.1| ATP-dependent Clp protease adaptor protein ClpS [Neisseria gonorrhoeae PID332] gi|240125352|ref|ZP_04738238.1| ATP-dependent Clp protease adaptor protein ClpS [Neisseria gonorrhoeae SK-92-679] gi|240127805|ref|ZP_04740466.1| ATP-dependent Clp protease adaptor protein ClpS [Neisseria gonorrhoeae SK-93-1035] gi|254493323|ref|ZP_05106494.1| ATP-dependent Clp protease adapter protein clpS [Neisseria gonorrhoeae 1291] gi|260440923|ref|ZP_05794739.1| ATP-dependent Clp protease adaptor protein ClpS [Neisseria gonorrhoeae DGI2] gi|268594461|ref|ZP_06128628.1| ATP-dependent Clp protease adapter protein clpS [Neisseria gonorrhoeae 35/02] gi|268596457|ref|ZP_06130624.1| ATP-dependent Clp protease adapter protein clpS [Neisseria gonorrhoeae FA19] gi|268598589|ref|ZP_06132756.1| ATP-dependent Clp protease adapter protein clpS [Neisseria gonorrhoeae MS11] gi|268600942|ref|ZP_06135109.1| ATP-dependent Clp protease adapter protein clpS [Neisseria gonorrhoeae PID18] gi|268603249|ref|ZP_06137416.1| conserved hypothetical protein [Neisseria gonorrhoeae PID1] gi|268681729|ref|ZP_06148591.1| ATP-dependent Clp protease adapter protein clpS [Neisseria gonorrhoeae PID332] gi|268683956|ref|ZP_06150818.1| ATP-dependent Clp protease adapter protein clpS [Neisseria gonorrhoeae SK-92-679] gi|268686201|ref|ZP_06153063.1| ATP-dependent Clp protease adapter protein clpS [Neisseria gonorrhoeae SK-93-1035] gi|226512363|gb|EEH61708.1| ATP-dependent Clp protease adapter protein clpS [Neisseria gonorrhoeae 1291] gi|268547850|gb|EEZ43268.1| ATP-dependent Clp protease adapter protein clpS [Neisseria gonorrhoeae 35/02] gi|268550245|gb|EEZ45264.1| ATP-dependent Clp protease adapter protein clpS [Neisseria gonorrhoeae FA19] gi|268582720|gb|EEZ47396.1| ATP-dependent Clp protease adapter protein clpS [Neisseria gonorrhoeae MS11] gi|268585073|gb|EEZ49749.1| ATP-dependent Clp protease adapter protein clpS [Neisseria gonorrhoeae PID18] gi|268587380|gb|EEZ52056.1| conserved hypothetical protein [Neisseria gonorrhoeae PID1] gi|268622013|gb|EEZ54413.1| ATP-dependent Clp protease adapter protein clpS [Neisseria gonorrhoeae PID332] gi|268624240|gb|EEZ56640.1| ATP-dependent Clp protease adapter protein clpS [Neisseria gonorrhoeae SK-92-679] gi|268626485|gb|EEZ58885.1| ATP-dependent Clp protease adapter protein clpS [Neisseria gonorrhoeae SK-93-1035] Length = 112 Score = 86.7 bits (213), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 39/81 (48%), Positives = 52/81 (64%) Query: 57 PKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMK 116 PK Y V L+ND+YT MEFV+ +L F E A +ML VHH+G G CG Y +IA+ K Sbjct: 31 PKRYGVFLLNDDYTTMEFVVEILTEIFMLGQEQAVAVMLSVHHEGKGLCGTYTRDIAQTK 90 Query: 117 VNQVMNYSRQHQYPLQCIMEQ 137 QVM ++ +PLQCI+E+ Sbjct: 91 QQQVMQRAKAEGHPLQCIVEE 111 >gi|120554676|ref|YP_959027.1| ATP-dependent Clp protease adaptor protein ClpS [Marinobacter aquaeolei VT8] gi|158513045|sp|A1U1H1|CLPS_MARAV RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|120324525|gb|ABM18840.1| ATP-dependent Clp protease adaptor protein ClpS [Marinobacter aquaeolei VT8] Length = 119 Score = 86.7 bits (213), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 41/81 (50%), Positives = 54/81 (66%) Query: 57 PKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMK 116 P YRV+L+ND+YTPM+FV+ VL FF + E A +ML VH QG CGVY +IAE K Sbjct: 37 PARYRVVLLNDDYTPMDFVVDVLMKFFAMNEEKATQVMLLVHTQGKAVCGVYTRDIAETK 96 Query: 117 VNQVMNYSRQHQYPLQCIMEQ 137 QV YS + ++PL C +E+ Sbjct: 97 AAQVNQYSSECEHPLLCEIER 117 >gi|226944902|ref|YP_002799975.1| ATP-dependent Clp protease adaptor protein ClpS [Azotobacter vinelandii DJ] gi|259491243|sp|C1DKZ8|CLPS_AZOVD RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|226719829|gb|ACO79000.1| ATP-dependent clp protease adaptor protein, ClpS [Azotobacter vinelandii DJ] Length = 120 Score = 86.7 bits (213), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 37/84 (44%), Positives = 59/84 (70%) Query: 54 VRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIA 113 ++VP +Y+V++ ND+YTPM+FV+ VL+ FF + E A +ML VH +G CG++ ++A Sbjct: 35 LKVPPMYKVVMFNDDYTPMDFVVEVLEKFFNLNRELATKVMLTVHTEGRAVCGMFTRDVA 94 Query: 114 EMKVNQVMNYSRQHQYPLQCIMEQ 137 E K QV Y+R+ Q+PL C +E+ Sbjct: 95 ETKAMQVNQYARECQHPLLCEIEK 118 >gi|59800852|ref|YP_207564.1| hypothetical protein NGO0409 [Neisseria gonorrhoeae FA 1090] gi|67460149|sp|Q5F9I5|CLPS_NEIG1 RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|59717747|gb|AAW89152.1| conserved hypothetical protein [Neisseria gonorrhoeae FA 1090] Length = 100 Score = 86.7 bits (213), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 39/81 (48%), Positives = 52/81 (64%) Query: 57 PKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMK 116 PK Y V L+ND+YT MEFV+ +L F E A +ML VHH+G G CG Y +IA+ K Sbjct: 19 PKRYGVFLLNDDYTTMEFVVEILTEIFMLGQEQAVAVMLSVHHEGKGLCGTYTRDIAQTK 78 Query: 117 VNQVMNYSRQHQYPLQCIMEQ 137 QVM ++ +PLQCI+E+ Sbjct: 79 QQQVMQRAKAEGHPLQCIVEE 99 >gi|57167994|ref|ZP_00367133.1| Uncharacterized ACR, COG2127 [Campylobacter coli RM2228] gi|305431855|ref|ZP_07401022.1| ATP-dependent Clp protease adaptor protein ClpS [Campylobacter coli JV20] gi|57020368|gb|EAL57037.1| Uncharacterized ACR, COG2127 [Campylobacter coli RM2228] gi|304444939|gb|EFM37585.1| ATP-dependent Clp protease adaptor protein ClpS [Campylobacter coli JV20] Length = 96 Score = 86.7 bits (213), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 41/87 (47%), Positives = 60/87 (68%) Query: 52 SKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYE 111 SK++ PK+++V+L+ND+ T M+FVI VL N FY D ETA IML+VH G G CG+Y E Sbjct: 10 SKLKEPKMFKVILLNDDVTTMDFVIEVLINIFYHDFETANKIMLEVHLNGSGICGIYTQE 69 Query: 112 IAEMKVNQVMNYSRQHQYPLQCIMEQK 138 IA K +V + ++ +PLQ +E++ Sbjct: 70 IALSKQKKVSDAAKLANFPLQTRVEEE 96 >gi|34556771|ref|NP_906586.1| hypothetical protein WS0336 [Wolinella succinogenes DSM 1740] gi|39930938|sp|Q7MSL3|CLPS_WOLSU RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|34482485|emb|CAE09486.1| conserved hypothetical protein [Wolinella succinogenes] Length = 102 Score = 86.7 bits (213), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 37/94 (39%), Positives = 65/94 (69%) Query: 44 LDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIG 103 ++E++ V P+ ++V+L+ND+Y+ M+FV+ VL F K+ + A +MLKVH++G G Sbjct: 8 FETEIKEEIIVAEPRRFKVILLNDDYSTMDFVVEVLMVIFNKNFDEALGVMLKVHNEGRG 67 Query: 104 ECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 CG+Y Y++AE KV+QV + + +PL+ I+E+ Sbjct: 68 VCGIYPYDVAETKVSQVKKKAEESGFPLRAILEE 101 >gi|289679172|ref|ZP_06500062.1| ATP-dependent Clp protease adaptor protein ClpS [Pseudomonas syringae pv. syringae FF5] Length = 94 Score = 86.7 bits (213), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 38/84 (45%), Positives = 58/84 (69%) Query: 54 VRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIA 113 ++ P +Y+V+L ND+YTPM+FV+ VL+ FF + E A +ML VH +G CG++ +IA Sbjct: 9 LQAPPMYKVVLFNDDYTPMDFVVEVLEVFFNLNRELATKVMLAVHTEGRAVCGLFTRDIA 68 Query: 114 EMKVNQVMNYSRQHQYPLQCIMEQ 137 E K QV Y+R+ Q+PL C +E+ Sbjct: 69 ETKAMQVNQYARESQHPLLCEIEK 92 >gi|146282647|ref|YP_001172800.1| ATP-dependent Clp protease adaptor protein ClpS [Pseudomonas stutzeri A1501] gi|145570852|gb|ABP79958.1| ATP-dependent Clp protease adaptor protein clpS [Pseudomonas stutzeri A1501] Length = 167 Score = 86.7 bits (213), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 38/86 (44%), Positives = 57/86 (66%) Query: 52 SKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYE 111 +++ P +Y+V++ ND+YTPM+FV+ VL+ F E A IML VH +G CGVY + Sbjct: 80 PQLKAPPMYKVVMFNDDYTPMDFVVEVLEGIFNHSREQATKIMLAVHTEGQAVCGVYTRD 139 Query: 112 IAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +AE K QV Y+R+ Q+PL C +E+ Sbjct: 140 VAETKAMQVNQYARECQHPLLCEIEK 165 >gi|149376383|ref|ZP_01894146.1| ATP-dependent Clp protease adaptor protein ClpS [Marinobacter algicola DG893] gi|149359397|gb|EDM47858.1| ATP-dependent Clp protease adaptor protein ClpS [Marinobacter algicola DG893] Length = 119 Score = 86.7 bits (213), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 41/84 (48%), Positives = 56/84 (66%) Query: 54 VRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIA 113 ++ P +RVLL+ND+YTPM+FV+ VL FF + E A +ML VH QG CGVY +IA Sbjct: 34 LKRPARFRVLLLNDDYTPMDFVVDVLMKFFGMNEEKATQVMLLVHTQGKAVCGVYTRDIA 93 Query: 114 EMKVNQVMNYSRQHQYPLQCIMEQ 137 E K QV YS + ++PL C +E+ Sbjct: 94 ETKAAQVNQYSSECEHPLLCEIER 117 >gi|82523955|emb|CAI78766.1| ATP-dependent Clp protease adaptor protein ClpS [uncultured epsilon proteobacterium] Length = 99 Score = 86.7 bits (213), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 39/82 (47%), Positives = 57/82 (69%) Query: 57 PKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMK 116 PK Y+V ++ND+YT M+FV+ VL F+K +E ++ IML+VH + G CGVY +EIAE K Sbjct: 18 PKKYKVFILNDDYTSMDFVVDVLMTIFHKSYEESEAIMLEVHKKDRGLCGVYTHEIAETK 77 Query: 117 VNQVMNYSRQHQYPLQCIMEQK 138 V QV +R +PL+ ME++ Sbjct: 78 VMQVHKKARDSGFPLKSTMEEE 99 >gi|330987929|gb|EGH86032.1| ATP-dependent Clp protease adaptor protein ClpS [Pseudomonas syringae pv. lachrymans str. M301315] Length = 120 Score = 86.3 bits (212), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 38/84 (45%), Positives = 57/84 (67%) Query: 54 VRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIA 113 ++ P +Y+V+L ND+YTPM+FV+ VL+ FF + E A +ML VH +G CG++ +IA Sbjct: 35 LQAPPMYKVVLFNDDYTPMDFVVEVLEVFFNLNRELATKVMLAVHTEGRAVCGLFTRDIA 94 Query: 114 EMKVNQVMNYSRQHQYPLQCIMEQ 137 E K QV Y+R+ Q+PL C E+ Sbjct: 95 ETKAMQVNQYARESQHPLLCETEK 118 >gi|316984242|gb|EFV63218.1| ATP-dependent Clp protease adaptor ClpS family protein [Neisseria meningitidis H44/76] Length = 183 Score = 86.3 bits (212), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 39/81 (48%), Positives = 52/81 (64%) Query: 57 PKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMK 116 PK Y V L+ND+YT MEFV+ +L F E A +ML VHH+G G CG Y +IA+ K Sbjct: 102 PKRYGVFLLNDDYTTMEFVVEILTEIFMLGQEQAVAVMLLVHHEGKGLCGTYTRDIAQTK 161 Query: 117 VNQVMNYSRQHQYPLQCIMEQ 137 QVM ++ +PLQCI+E+ Sbjct: 162 QQQVMQRAKAEGHPLQCIVEE 182 >gi|296315334|ref|ZP_06865275.1| ATP-dependent Clp protease adaptor protein ClpS [Neisseria polysaccharea ATCC 43768] gi|296837710|gb|EFH21648.1| ATP-dependent Clp protease adaptor protein ClpS [Neisseria polysaccharea ATCC 43768] Length = 100 Score = 86.3 bits (212), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 41/96 (42%), Positives = 56/96 (58%) Query: 42 NCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQG 101 +C + K PK Y V L+ND+YT MEFV+ +L F E A +ML VHH+G Sbjct: 4 HCQSDTLLSDLKTLPPKRYGVFLLNDDYTTMEFVVEILTEIFMLGQEQAVAVMLLVHHEG 63 Query: 102 IGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 G CG Y +IA+ K QVM ++ +PLQCI+E+ Sbjct: 64 KGLCGTYTRDIAQTKQQQVMQRAKAEGHPLQCIVEE 99 >gi|291277520|ref|YP_003517292.1| putative ATP-dependent Clp protease adapter protein ClpS [Helicobacter mustelae 12198] gi|290964714|emb|CBG40569.1| putative ATP-dependent Clp protease adapter protein, ClpS [Helicobacter mustelae 12198] Length = 100 Score = 86.3 bits (212), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 36/81 (44%), Positives = 57/81 (70%) Query: 52 SKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYE 111 +K+ P + V+++ND+YTPM+FVI++L + F K+ + A IML+VHH+G G CG+Y Y+ Sbjct: 14 TKISEPIMASVIILNDDYTPMDFVINILMSVFEKNQDQATQIMLEVHHKGSGVCGIYPYD 73 Query: 112 IAEMKVNQVMNYSRQHQYPLQ 132 IAE+K+ ++ Q PLQ Sbjct: 74 IAELKLQIAREKTKTAQLPLQ 94 >gi|330954576|gb|EGH54836.1| ATP-dependent Clp protease adaptor protein ClpS [Pseudomonas syringae Cit 7] Length = 120 Score = 86.3 bits (212), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 38/84 (45%), Positives = 58/84 (69%) Query: 54 VRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIA 113 ++ P +Y+V+L ND+YTPM+FV+ VL+ FF + E A +ML VH +G CG++ +IA Sbjct: 35 LQAPPMYKVVLFNDDYTPMDFVVEVLEVFFNLNRELATKVMLAVHTEGRAVCGLFTRDIA 94 Query: 114 EMKVNQVMNYSRQHQYPLQCIMEQ 137 E K QV Y+R+ Q+PL C +E+ Sbjct: 95 ETKAMQVNQYAREGQHPLLCEIEK 118 >gi|261400156|ref|ZP_05986281.1| ATP-dependent Clp protease adaptor protein ClpS [Neisseria lactamica ATCC 23970] gi|269210155|gb|EEZ76610.1| ATP-dependent Clp protease adaptor protein ClpS [Neisseria lactamica ATCC 23970] Length = 112 Score = 86.3 bits (212), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 39/81 (48%), Positives = 53/81 (65%) Query: 57 PKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMK 116 PK Y V L+ND+YT MEFV+ +L F E A +ML VHH+G G CG Y +IA+ K Sbjct: 31 PKRYGVFLLNDDYTTMEFVVEILTEIFMLGQEQAVAVMLLVHHEGKGLCGTYTRDIAQTK 90 Query: 117 VNQVMNYSRQHQYPLQCIMEQ 137 QVM+ ++ +PLQCI+E+ Sbjct: 91 QRQVMDMAKAEGHPLQCIVEE 111 >gi|309379405|emb|CBX21972.1| unnamed protein product [Neisseria lactamica Y92-1009] Length = 100 Score = 86.3 bits (212), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 39/81 (48%), Positives = 53/81 (65%) Query: 57 PKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMK 116 PK Y V L+ND+YT MEFV+ +L F E A +ML VHH+G G CG Y +IA+ K Sbjct: 19 PKRYGVFLLNDDYTTMEFVVEILTEIFMLGQEQAVAVMLLVHHEGKGLCGTYTRDIAQTK 78 Query: 117 VNQVMNYSRQHQYPLQCIMEQ 137 QVM+ ++ +PLQCI+E+ Sbjct: 79 QRQVMDRAKAEGHPLQCIVEE 99 >gi|254458761|ref|ZP_05072185.1| ATP-dependent Clp protease adaptor protein ClpS [Campylobacterales bacterium GD 1] gi|207084527|gb|EDZ61815.1| ATP-dependent Clp protease adaptor protein ClpS [Campylobacterales bacterium GD 1] Length = 99 Score = 86.3 bits (212), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 41/94 (43%), Positives = 63/94 (67%) Query: 45 DSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGE 104 D E+ K++ PK Y+V L+ND+YT M+FVI +L F+K + A+ IML +H + G Sbjct: 6 DLELYNEVKLKHPKKYKVFLLNDDYTSMDFVIDILITIFHKSYSQAESIMLDIHKKERGL 65 Query: 105 CGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 CGVY +EIAE KV QV ++ + +PL+ +ME++ Sbjct: 66 CGVYTHEIAETKVMQVRRKAKDNGFPLKAMMEEE 99 >gi|255065179|ref|ZP_05317034.1| ATP-dependent Clp protease adaptor protein ClpS [Neisseria sicca ATCC 29256] gi|255050600|gb|EET46064.1| ATP-dependent Clp protease adaptor protein ClpS [Neisseria sicca ATCC 29256] Length = 103 Score = 86.3 bits (212), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 40/85 (47%), Positives = 53/85 (62%) Query: 53 KVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEI 112 K PK Y V L+ND+YT MEFV+ +L F E A +ML VHH+G G CG Y +I Sbjct: 18 KTAPPKRYGVFLLNDDYTTMEFVVEILTEIFMLGQEQAVAVMLLVHHEGKGLCGTYTRDI 77 Query: 113 AEMKVNQVMNYSRQHQYPLQCIMEQ 137 A+ K QVM ++ +PLQCI+E+ Sbjct: 78 AQTKQQQVMQRAKAEGHPLQCIVEE 102 >gi|261364236|ref|ZP_05977119.1| ATP-dependent Clp protease adaptor protein ClpS [Neisseria mucosa ATCC 25996] gi|288567473|gb|EFC89033.1| ATP-dependent Clp protease adaptor protein ClpS [Neisseria mucosa ATCC 25996] Length = 103 Score = 86.3 bits (212), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 40/85 (47%), Positives = 53/85 (62%) Query: 53 KVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEI 112 K PK Y V L+ND+YT MEFV+ +L F E A +ML VHH+G G CG Y +I Sbjct: 18 KTAPPKRYGVFLLNDDYTTMEFVVEILTEIFMLGEEQAVAVMLLVHHEGKGLCGTYTRDI 77 Query: 113 AEMKVNQVMNYSRQHQYPLQCIMEQ 137 A+ K QVM ++ +PLQCI+E+ Sbjct: 78 AQTKQQQVMQRAKAEGHPLQCIVEE 102 >gi|304387855|ref|ZP_07370029.1| ATP-dependent Clp protease adaptor protein ClpS [Neisseria meningitidis ATCC 13091] gi|304338120|gb|EFM04256.1| ATP-dependent Clp protease adaptor protein ClpS [Neisseria meningitidis ATCC 13091] Length = 112 Score = 85.9 bits (211), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 39/81 (48%), Positives = 52/81 (64%) Query: 57 PKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMK 116 PK Y V L+ND+YT MEFV+ +L F E A +ML VHH+G G CG Y +IA+ K Sbjct: 31 PKRYGVFLLNDDYTTMEFVVEILTEIFMLGQEQAVAVMLLVHHEGKGLCGTYTRDIAQTK 90 Query: 117 VNQVMNYSRQHQYPLQCIMEQ 137 QVM ++ +PLQCI+E+ Sbjct: 91 QQQVMQRAKAEGHPLQCIVEE 111 >gi|197121252|ref|YP_002133203.1| ATP-dependent Clp protease adaptor protein ClpS [Anaeromyxobacter sp. K] gi|220915956|ref|YP_002491260.1| ATP-dependent Clp protease adaptor protein ClpS [Anaeromyxobacter dehalogenans 2CP-1] gi|196171101|gb|ACG72074.1| ATP-dependent Clp protease adaptor protein ClpS [Anaeromyxobacter sp. K] gi|219953810|gb|ACL64194.1| ATP-dependent Clp protease adaptor protein ClpS [Anaeromyxobacter dehalogenans 2CP-1] Length = 108 Score = 85.9 bits (211), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 45/99 (45%), Positives = 59/99 (59%), Gaps = 5/99 (5%) Query: 45 DSEV-----RFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHH 99 D+EV R + + P LYRVLL ND+YT EFV VL F D E+A IML VH Sbjct: 10 DTEVVVPKTRAERETKRPPLYRVLLHNDHYTTQEFVDFVLMTVFNHDPESAHRIMLHVHM 69 Query: 100 QGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 G+G G+Y YEIAE K + M+ +R+ +YPL +E + Sbjct: 70 HGVGVAGIYPYEIAETKARKTMDLAREAEYPLLVTIEPE 108 >gi|161869772|ref|YP_001598940.1| ATP-dependent Clp protease adaptor protein ClpS [Neisseria meningitidis 053442] gi|161595325|gb|ABX72985.1| conserved hypothetical protein [Neisseria meningitidis 053442] Length = 153 Score = 85.9 bits (211), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 39/81 (48%), Positives = 52/81 (64%) Query: 57 PKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMK 116 PK Y V L+ND+YT MEFV+ +L F E A +ML VHH+G G CG Y +IA+ K Sbjct: 72 PKRYGVFLLNDDYTTMEFVVEILTEIFMLGQEQAVAVMLLVHHEGKGLCGTYTRDIAQTK 131 Query: 117 VNQVMNYSRQHQYPLQCIMEQ 137 QVM ++ +PLQCI+E+ Sbjct: 132 QQQVMQRAKAEGHPLQCIVEE 152 >gi|254804708|ref|YP_003082929.1| putative ATP-dependent Clp protease adaptor protein [Neisseria meningitidis alpha14] gi|254668250|emb|CBA05092.1| putative ATP-dependent Clp protease adaptor protein [Neisseria meningitidis alpha14] gi|308389011|gb|ADO31331.1| putative ATP-dependent Clp protease adaptor protein clpS [Neisseria meningitidis alpha710] gi|325127944|gb|EGC50846.1| ATP-dependent Clp protease adaptor protein ClpS [Neisseria meningitidis N1568] gi|325129979|gb|EGC52775.1| ATP-dependent Clp protease adaptor protein ClpS [Neisseria meningitidis OX99.30304] Length = 100 Score = 85.9 bits (211), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 39/81 (48%), Positives = 52/81 (64%) Query: 57 PKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMK 116 PK Y V L+ND+YT MEFV+ +L F E A +ML VHH+G G CG Y +IA+ K Sbjct: 19 PKRYGVFLLNDDYTTMEFVVEILTEIFMLGQEQAVAVMLLVHHEGKGLCGTYTRDIAQTK 78 Query: 117 VNQVMNYSRQHQYPLQCIMEQ 137 QVM ++ +PLQCI+E+ Sbjct: 79 QQQVMQRAKAEGHPLQCIVEE 99 >gi|126667265|ref|ZP_01738238.1| ATP-dependent Clp protease adaptor protein ClpS [Marinobacter sp. ELB17] gi|126628210|gb|EAZ98834.1| ATP-dependent Clp protease adaptor protein ClpS [Marinobacter sp. ELB17] Length = 117 Score = 85.9 bits (211), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 40/84 (47%), Positives = 57/84 (67%) Query: 54 VRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIA 113 ++ P +RV+L+ND+YTPM+FV+ VL FF + E A +ML VH QG CGVY+ +IA Sbjct: 32 LKRPAQFRVILLNDDYTPMDFVVEVLTTFFGMNEEKATQVMLLVHTQGKAVCGVYSRDIA 91 Query: 114 EMKVNQVMNYSRQHQYPLQCIMEQ 137 E K QV +YS + +PL C +E+ Sbjct: 92 ETKAAQVNHYSSECDHPLLCEIER 115 >gi|261377437|ref|ZP_05982010.1| ATP-dependent Clp protease adaptor protein ClpS [Neisseria cinerea ATCC 14685] gi|269146155|gb|EEZ72573.1| ATP-dependent Clp protease adaptor protein ClpS [Neisseria cinerea ATCC 14685] Length = 100 Score = 85.5 bits (210), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 39/81 (48%), Positives = 52/81 (64%) Query: 57 PKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMK 116 PK Y V L+ND+YT MEFV+ +L F E A +ML VHH+G G CG Y +IA+ K Sbjct: 19 PKRYGVFLLNDDYTTMEFVVEILTEIFMLGQEQAVAVMLLVHHEGKGLCGTYTRDIAQTK 78 Query: 117 VNQVMNYSRQHQYPLQCIMEQ 137 QVM ++ +PLQCI+E+ Sbjct: 79 QQQVMQRAKAEGHPLQCIVEE 99 >gi|313683054|ref|YP_004060792.1| ATP-dependent clp protease adaptor protein clps [Sulfuricurvum kujiense DSM 16994] gi|313155914|gb|ADR34592.1| ATP-dependent Clp protease adaptor protein ClpS [Sulfuricurvum kujiense DSM 16994] Length = 99 Score = 85.5 bits (210), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 40/81 (49%), Positives = 56/81 (69%) Query: 57 PKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMK 116 PK Y V L+ND+YT M+FV+ +L F K+ A IM++VH G G CGVY YE+AE K Sbjct: 18 PKQYNVFLLNDDYTSMDFVVDILMKLFRKNFHDAHRIMIEVHQNGRGLCGVYPYEVAETK 77 Query: 117 VNQVMNYSRQHQYPLQCIMEQ 137 V+QV +R++ +PL+ IME+ Sbjct: 78 VHQVSILARENGFPLKAIMEE 98 >gi|119476169|ref|ZP_01616521.1| ATP-dependent Clp protease adaptor protein ClpS [marine gamma proteobacterium HTCC2143] gi|119450796|gb|EAW32030.1| ATP-dependent Clp protease adaptor protein ClpS [marine gamma proteobacterium HTCC2143] Length = 124 Score = 85.5 bits (210), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 36/89 (40%), Positives = 55/89 (61%) Query: 48 VRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGV 107 ++ P +Y+V+L+ND+YTPMEFV+ +L+ FF E A +ML VH G G CG+ Sbjct: 32 AELKPALKRPPMYKVVLLNDDYTPMEFVVEILETFFSMGREQATQVMLAVHTHGKGVCGL 91 Query: 108 YAYEIAEMKVNQVMNYSRQHQYPLQCIME 136 + ++AE K QV Y+R+ +PL +E Sbjct: 92 FTRDVAETKAAQVNQYARESHHPLLAEVE 120 >gi|108758335|ref|YP_634160.1| ATP-dependent Clp protease adaptor protein ClpS [Myxococcus xanthus DK 1622] gi|122387659|sp|Q1CZL3|CLPS_MYXXD RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|108462215|gb|ABF87400.1| ATP-dependent Clp protease adaptor protein ClpS [Myxococcus xanthus DK 1622] Length = 107 Score = 85.5 bits (210), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 42/98 (42%), Positives = 60/98 (61%) Query: 39 EFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVH 98 E D + +E K++ P LY+VLL NDNYT EFV+ VL+ F+K A IML VH Sbjct: 6 EHDTSVITESAPKQKLKKPPLYKVLLHNDNYTTREFVVAVLKEVFHKSETDAVQIMLHVH 65 Query: 99 HQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIME 136 + G+G GVY Y++AE K+ V ++++ PL+ ME Sbjct: 66 YNGVGVAGVYTYDVAETKIQTVEAAAQENDMPLRLSME 103 >gi|15676733|ref|NP_273878.1| hypothetical protein NMB0837 [Neisseria meningitidis MC58] gi|121634615|ref|YP_974860.1| hypothetical protein NMC0775 [Neisseria meningitidis FAM18] gi|12230808|sp|Q9JZZ5|CLPS_NEIMB RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|7226071|gb|AAF41248.1| conserved hypothetical protein [Neisseria meningitidis MC58] gi|120866321|emb|CAM10062.1| putative ATP-dependent Clp protease adaptor protein clpS [Neisseria meningitidis FAM18] gi|254670466|emb|CBA06136.1| conserved hypothetical protein [Neisseria meningitidis alpha153] gi|254672383|emb|CBA05650.1| conserved hypothetical protein [Neisseria meningitidis alpha275] gi|261392811|emb|CAX50392.1| ATP-dependent Clp protease adaptor protein ClpS [Neisseria meningitidis 8013] gi|319410196|emb|CBY90534.1| ATP-dependent Clp protease adapter protein clpS [Neisseria meningitidis WUE 2594] gi|325132022|gb|EGC54720.1| ATP-dependent Clp protease adaptor protein ClpS [Neisseria meningitidis M6190] gi|325134027|gb|EGC56682.1| ATP-dependent Clp protease adaptor protein ClpS [Neisseria meningitidis M13399] gi|325135948|gb|EGC58558.1| ATP-dependent Clp protease adaptor protein ClpS [Neisseria meningitidis M0579] gi|325137776|gb|EGC60351.1| ATP-dependent Clp protease adaptor protein ClpS [Neisseria meningitidis ES14902] gi|325140015|gb|EGC62544.1| ATP-dependent Clp protease adaptor protein ClpS [Neisseria meningitidis CU385] gi|325144133|gb|EGC66440.1| ATP-dependent Clp protease adaptor protein ClpS [Neisseria meningitidis M01-240013] gi|325198040|gb|ADY93496.1| ATP-dependent Clp protease adaptor protein ClpS [Neisseria meningitidis G2136] gi|325200483|gb|ADY95938.1| ATP-dependent Clp protease adaptor protein ClpS [Neisseria meningitidis H44/76] gi|325202375|gb|ADY97829.1| ATP-dependent Clp protease adaptor protein ClpS [Neisseria meningitidis M01-240149] gi|325203908|gb|ADY99361.1| ATP-dependent Clp protease adaptor protein ClpS [Neisseria meningitidis M01-240355] gi|325206329|gb|ADZ01782.1| ATP-dependent Clp protease adaptor protein ClpS [Neisseria meningitidis M04-240196] gi|325207873|gb|ADZ03325.1| ATP-dependent Clp protease adaptor protein ClpS [Neisseria meningitidis NZ-05/33] Length = 100 Score = 85.5 bits (210), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 39/81 (48%), Positives = 52/81 (64%) Query: 57 PKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMK 116 PK Y V L+ND+YT MEFV+ +L F E A +ML VHH+G G CG Y +IA+ K Sbjct: 19 PKRYGVFLLNDDYTTMEFVVEILTEIFMLGQEQAVAVMLLVHHEGKGLCGTYTRDIAQTK 78 Query: 117 VNQVMNYSRQHQYPLQCIMEQ 137 QVM ++ +PLQCI+E+ Sbjct: 79 QQQVMQRAKAEGHPLQCIVEE 99 >gi|298368623|ref|ZP_06979941.1| ATP-dependent Clp protease adaptor protein ClpS [Neisseria sp. oral taxon 014 str. F0314] gi|298282626|gb|EFI24113.1| ATP-dependent Clp protease adaptor protein ClpS [Neisseria sp. oral taxon 014 str. F0314] Length = 123 Score = 85.5 bits (210), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 46/113 (40%), Positives = 63/113 (55%), Gaps = 4/113 (3%) Query: 26 FMADSRMNKKGIA-EFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFY 84 F +MN+ + E D L+ R K PK Y V L+ND+YT M+FV+ VL F Sbjct: 13 FRTTYKMNRPNTSHESDTLLNENDR---KTAPPKRYGVFLLNDDYTTMDFVVEVLSEVFM 69 Query: 85 KDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 E A +ML VHH+G G CG Y +IA+ K QVM ++ +PLQC +E+ Sbjct: 70 LGEEQAVAVMLLVHHEGKGLCGTYTRDIAQTKQLQVMQRAKAAGHPLQCTVEE 122 >gi|92114559|ref|YP_574487.1| ATP-dependent Clp protease adaptor protein ClpS [Chromohalobacter salexigens DSM 3043] gi|91797649|gb|ABE59788.1| ATP-dependent Clp protease adaptor protein ClpS [Chromohalobacter salexigens DSM 3043] Length = 131 Score = 85.1 bits (209), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 38/77 (49%), Positives = 54/77 (70%) Query: 57 PKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMK 116 P +Y+V+L ND++TPMEFV+ VLQ+FF + E A +ML VH G CG++ +IAE K Sbjct: 49 PPMYKVVLHNDDFTPMEFVVEVLQSFFAMEREKAVQVMLVVHTHGKATCGIFTRDIAETK 108 Query: 117 VNQVMNYSRQHQYPLQC 133 +QV Y+R+ Q+PL C Sbjct: 109 CHQVNEYARECQHPLLC 125 >gi|313498102|gb|ADR59468.1| ClpS [Pseudomonas putida BIRD-1] Length = 81 Score = 85.1 bits (209), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 38/79 (48%), Positives = 55/79 (69%) Query: 59 LYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVN 118 +Y+V+L ND+YTPM+FV+ VL+ FF + E A IML VH +G CG++ +IAE K Sbjct: 1 MYKVVLFNDDYTPMDFVVEVLETFFSLNRELATKIMLTVHTEGRAVCGLFTRDIAETKAM 60 Query: 119 QVMNYSRQHQYPLQCIMEQ 137 QV Y+R+ Q+PL C +E+ Sbjct: 61 QVNQYARESQHPLLCEIEK 79 >gi|42527626|ref|NP_972724.1| hypothetical protein TDE2123 [Treponema denticola ATCC 35405] gi|67460342|sp|Q73KU4|CLPS_TREDE RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|41818454|gb|AAS12643.1| conserved hypothetical protein [Treponema denticola ATCC 35405] gi|325474421|gb|EGC77608.1| ATP-dependent Clp protease adaptor protein ClpS [Treponema denticola F0402] Length = 101 Score = 85.1 bits (209), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 38/87 (43%), Positives = 57/87 (65%) Query: 51 SSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAY 110 S K P+ YRV+L+ND++TPM+FV+ VL + F K E A+ +M KVH G G+Y Y Sbjct: 14 SEKFIEPENYRVILLNDDFTPMDFVVAVLISIFNKSQEEAETLMFKVHKTGQASVGIYVY 73 Query: 111 EIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +IA K QV+ ++ + +PLQC +E+ Sbjct: 74 DIATTKCFQVLTAAKNNNFPLQCKVEK 100 >gi|152993643|ref|YP_001359364.1| ATP-dependent Clp protease, adaptor protein ClpS [Sulfurovum sp. NBC37-1] gi|151425504|dbj|BAF73007.1| ATP-dependent Clp protease, adaptor protein ClpS [Sulfurovum sp. NBC37-1] Length = 99 Score = 85.1 bits (209), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 36/81 (44%), Positives = 58/81 (71%) Query: 57 PKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMK 116 P++Y+VLL ND+YT M+FV+ VL + F+K E A IML++H +G CGVY++EIA+ K Sbjct: 17 PQMYKVLLHNDDYTSMDFVVEVLTSIFHKTQEQAVQIMLQIHEKGKAICGVYSFEIAQTK 76 Query: 117 VNQVMNYSRQHQYPLQCIMEQ 137 QV ++++++PL +E+ Sbjct: 77 AEQVKQLAKKNEFPLLATIEE 97 >gi|149198609|ref|ZP_01875653.1| ATP-dependent Clp protease adaptor protein ClpS [Lentisphaera araneosa HTCC2155] gi|149138324|gb|EDM26733.1| ATP-dependent Clp protease adaptor protein ClpS [Lentisphaera araneosa HTCC2155] Length = 103 Score = 84.7 bits (208), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 37/94 (39%), Positives = 64/94 (68%) Query: 45 DSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGE 104 D+ + KV+ P ++V+L ND+YTPM+FV++++ + F+K + A +ML VH +G Sbjct: 10 DAALLEKRKVKRPSRFKVILHNDDYTPMDFVVYLIMSVFHKTEDEAAQLMLTVHVKGKAI 69 Query: 105 CGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 CG+Y EIAE KV++ M+ ++Q +PL C M+++ Sbjct: 70 CGIYPKEIAENKVDKAMSMAKQEGHPLLCTMQKE 103 >gi|57237989|ref|YP_179238.1| hypothetical protein CJE1250 [Campylobacter jejuni RM1221] gi|86150412|ref|ZP_01068638.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni CF93-6] gi|88596781|ref|ZP_01100018.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni 84-25] gi|218562721|ref|YP_002344500.1| ATP-dependent Clp protease adaptor protein [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|12230833|sp|Q9PNI7|CLPS_CAMJE RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|67460170|sp|Q5HTZ7|CLPS_CAMJR RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|57166793|gb|AAW35572.1| conserved hypothetical protein [Campylobacter jejuni RM1221] gi|85839237|gb|EAQ56500.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni CF93-6] gi|88191622|gb|EAQ95594.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni 84-25] gi|112360427|emb|CAL35224.1| ATP-dependent Clp protease adaptor protein [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|284926336|gb|ADC28688.1| ATP-dependent Clp protease adaptor protein [Campylobacter jejuni subsp. jejuni IA3902] gi|315058548|gb|ADT72877.1| ATP-dependent Clp protease adaptor protein ClpS [Campylobacter jejuni subsp. jejuni S3] Length = 96 Score = 84.7 bits (208), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 37/87 (42%), Positives = 60/87 (68%) Query: 52 SKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYE 111 +K+ PK+Y+V+L+ND+ T M+FVI +L N F+++ E A ML++HH G G CG+Y E Sbjct: 10 TKLSEPKMYKVILLNDDVTTMDFVIEILMNIFHQNLEKASQTMLEIHHNGSGICGIYTQE 69 Query: 112 IAEMKVNQVMNYSRQHQYPLQCIMEQK 138 IA K +VM+ ++ +PLQ +E++ Sbjct: 70 IALSKQKKVMDAAKLANFPLQAKVEEE 96 >gi|303249375|ref|ZP_07335601.1| ATP-dependent Clp protease adaptor protein ClpS [Desulfovibrio fructosovorans JJ] gi|302489213|gb|EFL49178.1| ATP-dependent Clp protease adaptor protein ClpS [Desulfovibrio fructosovorans JJ] Length = 104 Score = 84.7 bits (208), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 40/78 (51%), Positives = 55/78 (70%) Query: 60 YRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQ 119 Y+VLL ND+YT MEFVI VL F+K+ A IML VH+ G+G CG Y E+AE+KV+ Sbjct: 26 YKVLLHNDDYTTMEFVIQVLVGVFHKNENEATQIMLNVHNNGVGVCGEYTAEVAELKVSL 85 Query: 120 VMNYSRQHQYPLQCIMEQ 137 V ++++ YPL+C ME+ Sbjct: 86 VHRLAKENGYPLKCSMEE 103 >gi|218779933|ref|YP_002431251.1| ATP-dependent Clp protease adaptor protein ClpS [Desulfatibacillum alkenivorans AK-01] gi|259491244|sp|B8FGA3|CLPS_DESAA RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|218761317|gb|ACL03783.1| ATP-dependent Clp protease adaptor protein ClpS [Desulfatibacillum alkenivorans AK-01] Length = 104 Score = 84.3 bits (207), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 39/88 (44%), Positives = 57/88 (64%) Query: 51 SSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAY 110 + K P++++VLL ND+YT MEFV+ VLQ F K A IML VH++G+G GVY Sbjct: 17 TQKTERPRMFKVLLHNDDYTTMEFVVGVLQRVFNKSVPEATRIMLNVHNRGVGVAGVYTA 76 Query: 111 EIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 E+AE K+ V + ++ +PL+C ME + Sbjct: 77 EVAETKIETVHSMAQADGFPLKCSMEPE 104 >gi|86157217|ref|YP_464002.1| ATP-dependent Clp protease adaptor protein ClpS [Anaeromyxobacter dehalogenans 2CP-C] gi|85773728|gb|ABC80565.1| ATP-dependent Clp protease adaptor protein ClpS [Anaeromyxobacter dehalogenans 2CP-C] Length = 108 Score = 84.3 bits (207), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 40/93 (43%), Positives = 57/93 (61%) Query: 46 SEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGEC 105 + R + + P LY+VLL ND+YT EFV +VL F D E+A IML VH G+G Sbjct: 16 PKTRAERETKRPPLYKVLLHNDHYTTQEFVDYVLMTVFNHDPESAHRIMLHVHMHGVGVA 75 Query: 106 GVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 G+Y YEIAE K + ++ +R+ +YPL +E + Sbjct: 76 GIYPYEIAETKARKTLDLAREAEYPLLVTIEPE 108 >gi|95930477|ref|ZP_01313213.1| ATP-dependent Clp protease adaptor protein ClpS [Desulfuromonas acetoxidans DSM 684] gi|95133517|gb|EAT15180.1| ATP-dependent Clp protease adaptor protein ClpS [Desulfuromonas acetoxidans DSM 684] Length = 103 Score = 84.3 bits (207), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 39/93 (41%), Positives = 56/93 (60%) Query: 45 DSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGE 104 + EV + P Y V++ ND+YT MEFV+ VL+N + K A IML +HH+G+ Sbjct: 10 EGEVLSKEQTARPPRYNVIMHNDDYTTMEFVVEVLENIYRKQPAEATRIMLAIHHEGLAV 69 Query: 105 CGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 CG Y +EIAE KV Q +R +PL+C +E+ Sbjct: 70 CGNYPFEIAETKVEQTHRRARSAGHPLRCSIEE 102 >gi|153952414|ref|YP_001397780.1| hypothetical protein JJD26997_0615 [Campylobacter jejuni subsp. doylei 269.97] gi|166214731|sp|A7H2Q0|CLPS_CAMJD RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|152939860|gb|ABS44601.1| conserved hypothetical protein [Campylobacter jejuni subsp. doylei 269.97] Length = 96 Score = 84.3 bits (207), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 37/95 (38%), Positives = 63/95 (66%) Query: 44 LDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIG 103 L ++ +K+ PK+Y+V+L+ND+ T M+FVI +L N F+++ E A ML++HH G G Sbjct: 2 LKTQTLEQTKLSEPKMYKVILLNDDVTTMDFVIEILMNIFHQNLEKASQTMLEIHHNGSG 61 Query: 104 ECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 CG+Y EIA K +V++ ++ +PLQ +E++ Sbjct: 62 ICGIYTQEIALSKQKKVIDAAKLANFPLQAKVEEE 96 >gi|86150870|ref|ZP_01069086.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni 260.94] gi|85842040|gb|EAQ59286.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni 260.94] Length = 96 Score = 84.3 bits (207), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 37/87 (42%), Positives = 60/87 (68%) Query: 52 SKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYE 111 +K+ PK+Y+V+L+ND+ T M+FVI +L N F+++ E A MLK+HH G G CG+Y E Sbjct: 10 TKLSEPKMYKVILLNDDVTTMDFVIEILMNIFHQNLEKASQTMLKIHHNGSGICGIYTQE 69 Query: 112 IAEMKVNQVMNYSRQHQYPLQCIMEQK 138 IA K +V++ ++ +PLQ +E++ Sbjct: 70 IALSKQKKVIDAAKLANFPLQVKVEEE 96 >gi|221067305|ref|ZP_03543410.1| ATP-dependent Clp protease adaptor protein ClpS [Comamonas testosteroni KF-1] gi|220712328|gb|EED67696.1| ATP-dependent Clp protease adaptor protein ClpS [Comamonas testosteroni KF-1] Length = 76 Score = 83.6 bits (205), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 37/73 (50%), Positives = 51/73 (69%) Query: 64 LVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNY 123 ++ND++TPMEFVI VLQ F KD E+A IMLK+H G G CGVY+ ++A KV QV+ Sbjct: 1 MLNDDFTPMEFVIAVLQELFGKDRESATQIMLKIHLDGRGVCGVYSQDVAATKVEQVLQA 60 Query: 124 SRQHQYPLQCIME 136 +++ +PLQ E Sbjct: 61 AQKAGHPLQATFE 73 >gi|157738129|ref|YP_001490813.1| ATP-dependent Clp protease adaptor protein ClpS [Arcobacter butzleri RM4018] gi|315636272|ref|ZP_07891522.1| ATP-dependent Clp protease adaptor protein ClpS [Arcobacter butzleri JV22] gi|157699983|gb|ABV68143.1| ATP-dependent Clp protease adaptor protein ClpS [Arcobacter butzleri RM4018] gi|315479361|gb|EFU70044.1| ATP-dependent Clp protease adaptor protein ClpS [Arcobacter butzleri JV22] Length = 99 Score = 83.6 bits (205), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 40/97 (41%), Positives = 61/97 (62%) Query: 42 NCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQG 101 N ++ E+ ++ PK Y V L+ND+Y+ M+FVI VL F K + A IML +H+ G Sbjct: 3 NEIEVELNDELDLQEPKKYNVFLLNDDYSTMDFVIDVLVKIFRKSTQDATEIMLNIHNNG 62 Query: 102 IGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 G CG+Y +EIA KV QV +R+ +PL+ +ME++ Sbjct: 63 KGLCGIYTHEIALTKVMQVKTMAREKGFPLKAVMEEE 99 >gi|315929892|gb|EFV09052.1| ATP-dependent Clp protease adaptor protein ClpS family protein [Campylobacter jejuni subsp. jejuni 305] Length = 96 Score = 83.6 bits (205), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 36/87 (41%), Positives = 60/87 (68%) Query: 52 SKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYE 111 +K+ PK+Y+V+L+ND+ T M+FVI +L N F+++ E A ML++HH G G CG+Y E Sbjct: 10 TKLSEPKMYKVILLNDDVTTMDFVIEILMNIFHQNPEKASQTMLEIHHNGSGICGIYTQE 69 Query: 112 IAEMKVNQVMNYSRQHQYPLQCIMEQK 138 IA K +V++ ++ +PLQ +E++ Sbjct: 70 IALSKQKKVIDAAKLANFPLQAKVEEE 96 >gi|261381146|ref|ZP_05985719.1| ATP-dependent Clp protease adaptor protein ClpS [Neisseria subflava NJ9703] gi|284795952|gb|EFC51299.1| ATP-dependent Clp protease adaptor protein ClpS [Neisseria subflava NJ9703] Length = 103 Score = 83.2 bits (204), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 38/81 (46%), Positives = 53/81 (65%) Query: 57 PKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMK 116 PK Y V L+ND+YT MEFV+ +L F E A +ML VHH+G G CG Y +IA+ K Sbjct: 22 PKRYGVFLLNDDYTTMEFVVEILTEVFMLTQEQAVAVMLLVHHEGKGLCGTYTRDIAQTK 81 Query: 117 VNQVMNYSRQHQYPLQCIMEQ 137 +QVM ++ +PL+CI+E+ Sbjct: 82 QHQVMERAKAEGHPLKCIVEE 102 >gi|225023808|ref|ZP_03713000.1| hypothetical protein EIKCOROL_00673 [Eikenella corrodens ATCC 23834] gi|224943407|gb|EEG24616.1| hypothetical protein EIKCOROL_00673 [Eikenella corrodens ATCC 23834] Length = 101 Score = 83.2 bits (204), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 37/81 (45%), Positives = 55/81 (67%) Query: 57 PKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMK 116 PK Y V L+ND+YTPM+FV+ +L + F A+ +ML+VHH+G G CG+Y +IA+ K Sbjct: 20 PKRYGVFLLNDDYTPMDFVVGLLTDIFRLTENRAEAVMLQVHHEGKGLCGIYQKDIADTK 79 Query: 117 VNQVMNYSRQHQYPLQCIMEQ 137 QV N +RQ +PL ++E+ Sbjct: 80 HQQVQNLARQAGHPLLSMVEE 100 >gi|205355853|ref|ZP_03222622.1| hypothetical protein Cj8421_1136 [Campylobacter jejuni subsp. jejuni CG8421] gi|205346287|gb|EDZ32921.1| hypothetical protein Cj8421_1136 [Campylobacter jejuni subsp. jejuni CG8421] Length = 96 Score = 83.2 bits (204), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 36/87 (41%), Positives = 60/87 (68%) Query: 52 SKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYE 111 +K+ PK+Y+V+L+ND+ T M+FVI +L N F+++ E A ML++HH G G CG+Y E Sbjct: 10 TKLSEPKMYKVILLNDDVTTMDFVIEILMNIFHQNLEKASQTMLEIHHNGSGICGIYTQE 69 Query: 112 IAEMKVNQVMNYSRQHQYPLQCIMEQK 138 IA K +V++ ++ +PLQ +E++ Sbjct: 70 IALSKQKKVIDSAKLANFPLQAKVEEE 96 >gi|86152758|ref|ZP_01070963.1| ATP-dependent Clp protease adaptor protein ClpS [Campylobacter jejuni subsp. jejuni HB93-13] gi|121612672|ref|YP_001000785.1| hypothetical protein CJJ81176_1125 [Campylobacter jejuni subsp. jejuni 81-176] gi|157415368|ref|YP_001482624.1| hypothetical protein C8J_1048 [Campylobacter jejuni subsp. jejuni 81116] gi|167005700|ref|ZP_02271458.1| hypothetical protein Cjejjejuni_05870 [Campylobacter jejuni subsp. jejuni 81-176] gi|283956504|ref|ZP_06373984.1| hypothetical protein C1336_000250281 [Campylobacter jejuni subsp. jejuni 1336] gi|166214732|sp|A1W094|CLPS_CAMJJ RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|172047149|sp|A8FMG0|CLPS_CAMJ8 RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|85843643|gb|EAQ60853.1| ATP-dependent Clp protease adaptor protein ClpS [Campylobacter jejuni subsp. jejuni HB93-13] gi|87249258|gb|EAQ72219.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni 81-176] gi|157386332|gb|ABV52647.1| hypothetical protein C8J_1048 [Campylobacter jejuni subsp. jejuni 81116] gi|283792224|gb|EFC31013.1| hypothetical protein C1336_000250281 [Campylobacter jejuni subsp. jejuni 1336] gi|307748009|gb|ADN91279.1| ATP-dependent Clp protease adapter protein clpS [Campylobacter jejuni subsp. jejuni M1] gi|315932245|gb|EFV11188.1| ATP-dependent Clp protease adaptor protein ClpS family protein [Campylobacter jejuni subsp. jejuni 327] Length = 96 Score = 83.2 bits (204), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 36/87 (41%), Positives = 60/87 (68%) Query: 52 SKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYE 111 +K+ PK+Y+V+L+ND+ T M+FVI +L N F+++ E A ML++HH G G CG+Y E Sbjct: 10 TKLSEPKMYKVILLNDDVTTMDFVIEILMNIFHQNLEKASQTMLEIHHNGSGICGIYTQE 69 Query: 112 IAEMKVNQVMNYSRQHQYPLQCIMEQK 138 IA K +V++ ++ +PLQ +E++ Sbjct: 70 IALSKQKKVIDAAKLANFPLQAKVEEE 96 >gi|218767947|ref|YP_002342459.1| ATP-dependent Clp protease adaptor protein ClpS [Neisseria meningitidis Z2491] gi|12230806|sp|Q9JV14|CLPS_NEIMA RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|121051955|emb|CAM08263.1| hypothetical protein NMA1046 [Neisseria meningitidis Z2491] Length = 103 Score = 83.2 bits (204), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 38/81 (46%), Positives = 53/81 (65%) Query: 57 PKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMK 116 PK Y V L+ND+YT MEFV+ +L F E A +ML VHH+G G CG Y +IA+ K Sbjct: 22 PKRYGVFLLNDDYTTMEFVVEILTEVFMLAQEQAVAVMLLVHHEGKGLCGTYTRDIAQTK 81 Query: 117 VNQVMNYSRQHQYPLQCIMEQ 137 +QVM ++ +PL+CI+E+ Sbjct: 82 QHQVMERAKTEGHPLKCIVEE 102 >gi|206889423|ref|YP_002249321.1| ATP-dependent Clp protease adaptor protein ClpS [Thermodesulfovibrio yellowstonii DSM 11347] gi|206741361|gb|ACI20418.1| ATP-dependent Clp protease adaptor protein ClpS [Thermodesulfovibrio yellowstonii DSM 11347] Length = 101 Score = 83.2 bits (204), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 40/81 (49%), Positives = 53/81 (65%) Query: 57 PKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMK 116 P+LYRV L+ND+YT M+FV++VL F K A IML VH G G G+Y EIAE K Sbjct: 18 PELYRVYLLNDDYTTMDFVVYVLMTIFDKSKVEATAIMLHVHKHGKGLAGIYPKEIAETK 77 Query: 117 VNQVMNYSRQHQYPLQCIMEQ 137 V QV + +R +PL+C +E+ Sbjct: 78 VYQVESLARAKGFPLKCSIER 98 >gi|225075508|ref|ZP_03718707.1| hypothetical protein NEIFLAOT_00521 [Neisseria flavescens NRL30031/H210] gi|241758489|ref|ZP_04756608.1| ATP-dependent Clp protease adaptor protein ClpS [Neisseria flavescens SK114] gi|319637941|ref|ZP_07992707.1| ATP-dependent Clp protease adapter protein ClpS [Neisseria mucosa C102] gi|224953143|gb|EEG34352.1| hypothetical protein NEIFLAOT_00521 [Neisseria flavescens NRL30031/H210] gi|241321324|gb|EER57472.1| ATP-dependent Clp protease adaptor protein ClpS [Neisseria flavescens SK114] gi|317401096|gb|EFV81751.1| ATP-dependent Clp protease adapter protein ClpS [Neisseria mucosa C102] Length = 103 Score = 82.8 bits (203), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 38/81 (46%), Positives = 53/81 (65%) Query: 57 PKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMK 116 PK Y V L+ND+YT MEFV+ +L F E A +ML VHH+G G CG Y +IA+ K Sbjct: 22 PKRYGVFLLNDDYTTMEFVVEILTEVFMLAQEQAVAVMLLVHHEGKGLCGTYTRDIAQTK 81 Query: 117 VNQVMNYSRQHQYPLQCIMEQ 137 +QVM ++ +PL+CI+E+ Sbjct: 82 QHQVMERAKAEGHPLKCIVEE 102 >gi|15895099|ref|NP_348448.1| hypothetical protein CA_C1823 [Clostridium acetobutylicum ATCC 824] gi|21542321|sp|Q97I31|CLPS_CLOAB RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|15024798|gb|AAK79788.1|AE007691_6 Uncharacterized conserved protein [Clostridium acetobutylicum ATCC 824] gi|325509237|gb|ADZ20873.1| Conserved hypothetical protein [Clostridium acetobutylicum EA 2018] Length = 101 Score = 82.8 bits (203), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 40/95 (42%), Positives = 56/95 (58%) Query: 43 CLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGI 102 D ++ K+ PK+Y+V+L ND+YT MEFVI +L N F K A I VH GI Sbjct: 6 SFDENIKQKHKIEKPKMYKVILHNDDYTTMEFVIEILINVFNKVPANAVKITFDVHKNGI 65 Query: 103 GECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 G GVY Y+IA K+N+V + ++ YPL+ M + Sbjct: 66 GIAGVYPYDIAATKINEVKKLAYKNGYPLKLTMGE 100 >gi|51244739|ref|YP_064623.1| hypothetical protein DP0887 [Desulfotalea psychrophila LSv54] gi|67460264|sp|Q6APV7|CLPS_DESPS RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|50875776|emb|CAG35616.1| conserved hypothetical protein [Desulfotalea psychrophila LSv54] Length = 102 Score = 82.8 bits (203), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 37/86 (43%), Positives = 56/86 (65%) Query: 53 KVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEI 112 + R P +YRVL+ ND+YT M+FV+ +L F K A+ IML VH +G G+Y +EI Sbjct: 17 ETREPPMYRVLIHNDDYTSMDFVVAILMQIFSKTEAVAEEIMLTVHSSEVGVAGLYTHEI 76 Query: 113 AEMKVNQVMNYSRQHQYPLQCIMEQK 138 AE KV V + Q+++PL+C +E++ Sbjct: 77 AETKVAIVHQLAEQNEFPLRCSLEKE 102 >gi|281422658|ref|ZP_06253657.1| ATP-dependent Clp protease adaptor protein ClpS [Prevotella copri DSM 18205] gi|281403328|gb|EFB34008.1| ATP-dependent Clp protease adaptor protein ClpS [Prevotella copri DSM 18205] Length = 100 Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 33/85 (38%), Positives = 57/85 (67%) Query: 49 RFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVY 108 R ++++ P Y V++ ND++TPM+FV+ +L++ F+K A+ IMLKVHH+ G Y Sbjct: 11 RQKTRLKEPGRYVVMMFNDDFTPMDFVVEILESIFFKSQAEAEAIMLKVHHEEKAVVGTY 70 Query: 109 AYEIAEMKVNQVMNYSRQHQYPLQC 133 +Y+IA+ KV + M +R ++PL+ Sbjct: 71 SYDIAKSKVEKAMEKARTQKFPLKL 95 >gi|153003706|ref|YP_001378031.1| ATP-dependent Clp protease adaptor protein ClpS [Anaeromyxobacter sp. Fw109-5] gi|152027279|gb|ABS25047.1| ATP-dependent Clp protease adaptor protein ClpS [Anaeromyxobacter sp. Fw109-5] Length = 108 Score = 82.4 bits (202), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 39/91 (42%), Positives = 55/91 (60%) Query: 48 VRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGV 107 + + + P L+RVLL ND+YT EFV VL F+ D E+A IML VH G+G G+ Sbjct: 18 TKAEKETKRPSLFRVLLHNDDYTTQEFVDWVLVTVFHHDPESAHRIMLHVHMHGVGLAGI 77 Query: 108 YAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 Y +EIAE K + M +R+ +YPL +E + Sbjct: 78 YPFEIAETKAEKTMALAREAEYPLLVTVEPE 108 >gi|326794631|ref|YP_004312451.1| ATP-dependent Clp protease adapter protein clpS [Marinomonas mediterranea MMB-1] gi|326545395|gb|ADZ90615.1| ATP-dependent Clp protease adapter protein clpS [Marinomonas mediterranea MMB-1] Length = 117 Score = 81.6 bits (200), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 41/85 (48%), Positives = 62/85 (72%) Query: 53 KVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEI 112 ++ P +Y+V+L ND+YTPM+FV+ VLQ FF D E A+ +ML+VH +G G CGVY + I Sbjct: 30 ELSPPSMYQVVLFNDDYTPMDFVVFVLQRFFNMDGEKAEQVMLEVHMKGKGVCGVYPFGI 89 Query: 113 AEMKVNQVMNYSRQHQYPLQCIMEQ 137 AE KV QV + +Q+++PL C +++ Sbjct: 90 AETKVAQVQQFVQQNEHPLMCDLQK 114 >gi|331004964|ref|ZP_08328374.1| ATP-dependent Clp protease adaptor protein ClpS [gamma proteobacterium IMCC1989] gi|330421206|gb|EGG95462.1| ATP-dependent Clp protease adaptor protein ClpS [gamma proteobacterium IMCC1989] Length = 126 Score = 81.6 bits (200), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 36/80 (45%), Positives = 55/80 (68%) Query: 54 VRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIA 113 V+ P +Y+V+++ND+YTPMEFV++ L++FF E A +ML+VH +G CGVY +IA Sbjct: 39 VKKPPMYKVIMLNDDYTPMEFVVYALESFFGMGTEQATKVMLQVHTEGKAICGVYTKDIA 98 Query: 114 EMKVNQVMNYSRQHQYPLQC 133 E K QV + +++PL C Sbjct: 99 ETKAAQVNQCAADNEHPLLC 118 >gi|146329659|ref|YP_001209565.1| ATP-dependent Clp protease adaptor protein ClpS [Dichelobacter nodosus VCS1703A] gi|146233129|gb|ABQ14107.1| ATP-dependent Clp protease adaptor protein ClpS [Dichelobacter nodosus VCS1703A] Length = 104 Score = 81.6 bits (200), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 38/82 (46%), Positives = 54/82 (65%) Query: 52 SKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYE 111 S V P L+ V+L ND+YT M+FVI V+ FFY+ E A+ +MLKVH +G G++ + Sbjct: 18 SDVAQPDLFEVVLHNDDYTTMDFVIEVICRFFYQTAEVAEKLMLKVHFEGSAVVGIFPRD 77 Query: 112 IAEMKVNQVMNYSRQHQYPLQC 133 IAE K QV+ Y+R+ +PL C Sbjct: 78 IAETKARQVIAYAREKGHPLMC 99 >gi|57242270|ref|ZP_00370209.1| Uncharacterized ACR, COG2127 [Campylobacter upsaliensis RM3195] gi|57016950|gb|EAL53732.1| Uncharacterized ACR, COG2127 [Campylobacter upsaliensis RM3195] Length = 96 Score = 81.6 bits (200), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 38/82 (46%), Positives = 57/82 (69%) Query: 57 PKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMK 116 PK+Y+V+L+ND+ T M+FVI VL + F+ E A IMLK+H +G G CG+Y EIA K Sbjct: 15 PKMYKVVLLNDDVTTMDFVIEVLMHVFFHSFEKANEIMLKIHCEGSGVCGIYTQEIALSK 74 Query: 117 VNQVMNYSRQHQYPLQCIMEQK 138 +V N +++ Q+PLQ +E++ Sbjct: 75 QKKVQNMAKEAQFPLQSRVEEE 96 >gi|257453454|ref|ZP_05618749.1| ATP-dependent Clp protease adaptor protein ClpS [Enhydrobacter aerosaccus SK60] gi|257449206|gb|EEV24154.1| ATP-dependent Clp protease adaptor protein ClpS [Enhydrobacter aerosaccus SK60] Length = 161 Score = 81.6 bits (200), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 38/87 (43%), Positives = 55/87 (63%) Query: 52 SKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYE 111 +++ P++Y V++ ND+YTPMEFV+ VLQN F ++A IML +H QG G G+Y + Sbjct: 74 PELKKPQMYAVVMYNDDYTPMEFVVDVLQNHFKHTLDSAISIMLAIHQQGKGIAGIYPKD 133 Query: 112 IAEMKVNQVMNYSRQHQYPLQCIMEQK 138 IAE K V +RQ YPL +E + Sbjct: 134 IAETKAQAVNREARQAGYPLLSQIEPQ 160 >gi|161897896|ref|YP_433586.2| ATP-dependent Clp protease adaptor protein ClpS [Hahella chejuensis KCTC 2396] Length = 126 Score = 81.3 bits (199), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 37/84 (44%), Positives = 55/84 (65%) Query: 54 VRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIA 113 ++ P +Y+V+++ND+YTPM+FV+ VL FF A +ML VH QG CGV+ +IA Sbjct: 41 LKRPSMYQVVMLNDDYTPMDFVVEVLIRFFNMSEPKATQVMLAVHTQGRAVCGVFTRDIA 100 Query: 114 EMKVNQVMNYSRQHQYPLQCIMEQ 137 E K QV YS + ++PL C +E+ Sbjct: 101 ESKAAQVNQYSSECEHPLLCEIER 124 >gi|114707424|ref|ZP_01440320.1| ATP-dependent Clp protease adaptor protein ClpS [Fulvimarina pelagi HTCC2506] gi|114536983|gb|EAU40111.1| ATP-dependent Clp protease adaptor protein ClpS [Fulvimarina pelagi HTCC2506] Length = 101 Score = 81.3 bits (199), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 35/91 (38%), Positives = 55/91 (60%) Query: 41 DNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQ 100 D ++ + R KV PKLY+VLL+ND+YTP EFV+ VL+ F A+ +M+ H + Sbjct: 3 DTTVERKTRVKPKVERPKLYKVLLLNDDYTPREFVVMVLRAVFRLSDSQAETVMMTAHQK 62 Query: 101 GIGECGVYAYEIAEMKVNQVMNYSRQHQYPL 131 G VY ++AE K ++ + +++H YPL Sbjct: 63 GSCVVSVYPRDVAETKASEATDLAKEHGYPL 93 >gi|218891218|ref|YP_002440084.1| hypothetical protein PLES_24841 [Pseudomonas aeruginosa LESB58] gi|254235607|ref|ZP_04928930.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719] gi|254241054|ref|ZP_04934376.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192] gi|308154504|ref|NP_251311.3| hypothetical protein PA2621 [Pseudomonas aeruginosa PAO1] gi|313107658|ref|ZP_07793841.1| ATP-dependent Clp protease adaptor protein clpS [Pseudomonas aeruginosa 39016] gi|9948687|gb|AAG06009.1|AE004690_9 conserved hypothetical protein [Pseudomonas aeruginosa PAO1] gi|126167538|gb|EAZ53049.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719] gi|126194432|gb|EAZ58495.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192] gi|218771443|emb|CAW27210.1| conserved hypothetical protein [Pseudomonas aeruginosa LESB58] gi|310880343|gb|EFQ38937.1| ATP-dependent Clp protease adaptor protein clpS [Pseudomonas aeruginosa 39016] Length = 78 Score = 81.3 bits (199), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 37/76 (48%), Positives = 52/76 (68%) Query: 62 VLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVM 121 ++L ND+YTPM+FV+ VL+ FF D E A IML VH QG CG++ ++AE K QV Sbjct: 1 MVLFNDDYTPMDFVVEVLEVFFNMDREKATKIMLTVHTQGKAVCGLFTRDVAETKAMQVN 60 Query: 122 NYSRQHQYPLQCIMEQ 137 Y+R+ Q+PL C +E+ Sbjct: 61 QYARESQHPLLCEIEK 76 >gi|326793263|ref|YP_004311084.1| ATP-dependent Clp protease adaptor protein ClpS [Clostridium lentocellum DSM 5427] gi|326544027|gb|ADZ85886.1| ATP-dependent Clp protease adaptor protein ClpS [Clostridium lentocellum DSM 5427] Length = 99 Score = 81.3 bits (199), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 34/89 (38%), Positives = 57/89 (64%) Query: 49 RFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVY 108 + +KV++PK Y+V++ ND+YT MEFV+ VL F K A+ IM+ VH G G G+Y Sbjct: 10 KIKAKVKLPKQYQVIMFNDDYTTMEFVVEVLTQIFNKSAAEAEKIMMDVHKAGHGVAGIY 69 Query: 109 AYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +Y+IA K M+++++ +P + +E+ Sbjct: 70 SYDIAMTKAGTAMSWAKEEGFPFKLSVEE 98 >gi|315186429|gb|EFU20189.1| ATP-dependent Clp protease adaptor protein ClpS [Spirochaeta thermophila DSM 6578] Length = 115 Score = 81.3 bits (199), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 36/79 (45%), Positives = 53/79 (67%) Query: 59 LYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVN 118 +Y V+L+ND++TPMEFV+ +L + F+KD A IML VH G G+ Y Y+IA KV Sbjct: 36 MYWVVLLNDDFTPMEFVVDILVDIFHKDRVEATKIMLTVHRTGKGKVATYPYDIAVTKVA 95 Query: 119 QVMNYSRQHQYPLQCIMEQ 137 QV +R+ +PL+C +E+ Sbjct: 96 QVHRRAREAGHPLRCTVEK 114 >gi|154148611|ref|YP_001406669.1| ATP-dependent Clp protease adaptor protein ClpS [Campylobacter hominis ATCC BAA-381] gi|153804620|gb|ABS51627.1| ATP-dependent Clp protease adaptor protein ClpS [Campylobacter hominis ATCC BAA-381] Length = 97 Score = 80.9 bits (198), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 37/93 (39%), Positives = 60/93 (64%) Query: 46 SEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGEC 105 +E + +K+ +PK+YRV+L+ND+ T M+FV+ +L F K + A IML +H G G C Sbjct: 5 NESQTKTKIFIPKIYRVILLNDDVTTMDFVVMILMEIFEKTRDEAINIMLHIHKNGSGIC 64 Query: 106 GVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 G Y EIAE K ++V +++ +PL C +E++ Sbjct: 65 GSYIKEIAETKKDEVKMLAKKANFPLVCEIEEE 97 >gi|125973731|ref|YP_001037641.1| ATP-dependent Clp protease adaptor protein ClpS [Clostridium thermocellum ATCC 27405] gi|256005533|ref|ZP_05430494.1| ATP-dependent Clp protease adaptor protein ClpS [Clostridium thermocellum DSM 2360] gi|281417888|ref|ZP_06248908.1| ATP-dependent Clp protease adaptor protein ClpS [Clostridium thermocellum JW20] gi|229889819|sp|A3DER9|CLPS_CLOTH RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|125713956|gb|ABN52448.1| ATP-dependent Clp protease adaptor protein ClpS [Clostridium thermocellum ATCC 27405] gi|255990513|gb|EEU00634.1| ATP-dependent Clp protease adaptor protein ClpS [Clostridium thermocellum DSM 2360] gi|281409290|gb|EFB39548.1| ATP-dependent Clp protease adaptor protein ClpS [Clostridium thermocellum JW20] gi|316940075|gb|ADU74109.1| ATP-dependent Clp protease adaptor protein ClpS [Clostridium thermocellum DSM 1313] Length = 99 Score = 80.9 bits (198), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 35/80 (43%), Positives = 52/80 (65%) Query: 57 PKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMK 116 PK+Y+V+L+ND+YT M+FV+ +L F+K A IML VH +G G GVY Y+IA K Sbjct: 18 PKMYKVILLNDDYTTMDFVVEILITVFHKTAADATRIMLDVHRKGKGVVGVYTYDIARSK 77 Query: 117 VNQVMNYSRQHQYPLQCIME 136 + V + + ++PL +ME Sbjct: 78 IALVEKMAAEREFPLAAVME 97 >gi|283954672|ref|ZP_06372190.1| hypothetical protein C414_000240081 [Campylobacter jejuni subsp. jejuni 414] gi|283793864|gb|EFC32615.1| hypothetical protein C414_000240081 [Campylobacter jejuni subsp. jejuni 414] Length = 96 Score = 80.5 bits (197), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 36/86 (41%), Positives = 59/86 (68%) Query: 53 KVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEI 112 K+ PK+Y+V+L+ND+ T M+FVI +L N F+++ E A ML++HH G G CG+Y EI Sbjct: 11 KLSEPKMYKVILLNDDVTTMDFVIEILINIFHQNLEKANQTMLEIHHNGSGICGIYTQEI 70 Query: 113 AEMKVNQVMNYSRQHQYPLQCIMEQK 138 A K +V++ ++ +PLQ +E++ Sbjct: 71 ALSKQKKVIDAAKLANFPLQVKVEEE 96 >gi|317051275|ref|YP_004112391.1| ATP-dependent Clp protease adaptor protein ClpS [Desulfurispirillum indicum S5] gi|316946359|gb|ADU65835.1| ATP-dependent Clp protease adaptor protein ClpS [Desulfurispirillum indicum S5] Length = 100 Score = 80.5 bits (197), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 36/84 (42%), Positives = 53/84 (63%) Query: 54 VRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIA 113 V+ P+ Y VLL+ND+++ +FV+ VL F K + A I VHH G G CG+Y +EIA Sbjct: 16 VKEPRPYMVLLLNDDFSTWDFVVEVLVRVFRKTRDDADKITYHVHHNGQGVCGIYPFEIA 75 Query: 114 EMKVNQVMNYSRQHQYPLQCIMEQ 137 + KV QV ++ YPL+C+M + Sbjct: 76 QTKVQQVHELAKSRGYPLRCVMRE 99 >gi|315638592|ref|ZP_07893766.1| ATP-dependent Clp protease adaptor protein ClpS [Campylobacter upsaliensis JV21] gi|315481216|gb|EFU71846.1| ATP-dependent Clp protease adaptor protein ClpS [Campylobacter upsaliensis JV21] Length = 96 Score = 80.5 bits (197), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 38/82 (46%), Positives = 56/82 (68%) Query: 57 PKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMK 116 PK+Y+V+L+ND+ T M+FVI VL F+ E A IMLK+H +G G CG+Y EIA K Sbjct: 15 PKMYKVVLLNDDVTTMDFVIEVLMYVFFHSFEKANEIMLKIHCEGSGVCGIYTQEIALSK 74 Query: 117 VNQVMNYSRQHQYPLQCIMEQK 138 +V N +++ Q+PLQ +E++ Sbjct: 75 QKKVQNMAKEAQFPLQSRVEEE 96 >gi|307718944|ref|YP_003874476.1| ATP-dependent Clp protease adaptor protein clpS [Spirochaeta thermophila DSM 6192] gi|306532669|gb|ADN02203.1| ATP-dependent Clp protease adaptor protein clpS [Spirochaeta thermophila DSM 6192] Length = 134 Score = 80.1 bits (196), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 36/79 (45%), Positives = 53/79 (67%) Query: 59 LYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVN 118 +Y V+L+ND++TPMEFV+ +L + F+KD A IML VH G G+ Y Y+IA KV Sbjct: 55 MYWVVLLNDDFTPMEFVVDILVDIFHKDRVEATKIMLTVHRTGKGKVATYPYDIAVTKVA 114 Query: 119 QVMNYSRQHQYPLQCIMEQ 137 QV +R+ +PL+C +E+ Sbjct: 115 QVHRRAREAGHPLRCTVEK 133 >gi|294668967|ref|ZP_06734054.1| ATP-dependent Clp protease adaptor protein ClpS [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291309140|gb|EFE50383.1| ATP-dependent Clp protease adaptor protein ClpS [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 101 Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 37/85 (43%), Positives = 55/85 (64%) Query: 53 KVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEI 112 ++R P+ Y V L+ND+YT M+FV+ VL F + A +ML VHH+G G CGVY +I Sbjct: 15 QLRPPRKYGVFLLNDDYTTMDFVVEVLTEVFRLPEDRAVAVMLLVHHEGKGLCGVYTRDI 74 Query: 113 AEMKVNQVMNYSRQHQYPLQCIMEQ 137 A+ K QV + + +PL+CI+E+ Sbjct: 75 AQTKQMQVHHRAEDAGFPLKCILEE 99 >gi|49082482|gb|AAT50641.1| PA2621 [synthetic construct] Length = 79 Score = 79.7 bits (195), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 36/76 (47%), Positives = 51/76 (67%) Query: 62 VLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVM 121 ++L ND+YTPM+FV+ VL+ FF D E A ML VH QG CG++ ++AE K QV Sbjct: 1 MVLFNDDYTPMDFVVEVLEVFFNMDREKATKTMLTVHTQGKAVCGLFTRDVAETKAMQVN 60 Query: 122 NYSRQHQYPLQCIMEQ 137 Y+R+ Q+PL C +E+ Sbjct: 61 QYARESQHPLLCEIEK 76 >gi|149195297|ref|ZP_01872385.1| hypothetical protein CMTB2_00354 [Caminibacter mediatlanticus TB-2] gi|149134561|gb|EDM23049.1| hypothetical protein CMTB2_00354 [Caminibacter mediatlanticus TB-2] Length = 83 Score = 79.7 bits (195), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 37/81 (45%), Positives = 53/81 (65%) Query: 57 PKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMK 116 PKLY+V+L+ND+YT +FVI +L+ F K E A + LKV +G G+Y YEIA MK Sbjct: 2 PKLYKVILLNDDYTTFDFVIEILKTVFGKSEEDAINLTLKVDREGSAVVGLYPYEIALMK 61 Query: 117 VNQVMNYSRQHQYPLQCIMEQ 137 V++V +R YPL+ +E+ Sbjct: 62 VDKVHQLARSAGYPLRARIEE 82 >gi|268607890|ref|ZP_06141621.1| ATP-dependent Clp protease adaptor protein ClpS [Ruminococcus flavefaciens FD-1] Length = 99 Score = 79.7 bits (195), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 34/89 (38%), Positives = 56/89 (62%) Query: 49 RFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVY 108 R S V+ P+LY V+++ND++T MEFV+ VL F+KD TA+ IM+ VH G G Y Sbjct: 10 RSDSMVKEPRLYSVIMINDDFTTMEFVVGVLVEIFHKDEITAQAIMMHVHKNGQAVVGKY 69 Query: 109 AYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 Y+IA +V + + +++ +P + +E+ Sbjct: 70 PYDIASTRVKKALERAKEEGFPFRMTIEE 98 >gi|294787951|ref|ZP_06753195.1| ATP-dependent Clp protease adaptor protein ClpS [Simonsiella muelleri ATCC 29453] gi|294484244|gb|EFG31927.1| ATP-dependent Clp protease adaptor protein ClpS [Simonsiella muelleri ATCC 29453] Length = 100 Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 36/86 (41%), Positives = 56/86 (65%) Query: 52 SKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYE 111 +++ PK Y V L+ND+YT MEFV+ +L + F + E A +ML++HH G G CGVY + Sbjct: 13 NQIAPPKQYGVYLLNDDYTTMEFVVQILMDVFRQPEERAISVMLEIHHHGKGLCGVYTRD 72 Query: 112 IAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +A+ K +QVM + +PL C +E+ Sbjct: 73 MAQTKQHQVMILAADAGFPLLCTVEE 98 >gi|262277126|ref|ZP_06054919.1| ATP-dependent Clp protease adaptor protein ClpS [alpha proteobacterium HIMB114] gi|262224229|gb|EEY74688.1| ATP-dependent Clp protease adaptor protein ClpS [alpha proteobacterium HIMB114] Length = 100 Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 31/92 (33%), Positives = 63/92 (68%) Query: 46 SEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGEC 105 S++ F + + PK ++++L+ND++T M+FV+ +L F K + A +MLK+H++G C Sbjct: 9 SQLEFREQTKKPKFFKLILLNDDFTTMDFVVKILVMFLNKSNHEANFLMLKIHNEGSAIC 68 Query: 106 GVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 GV+ ++A N++ N+S+ ++ PL+CI+++ Sbjct: 69 GVFPKDVAVTIQNKIHNFSKINKQPLKCIVKE 100 >gi|303242598|ref|ZP_07329074.1| ATP-dependent Clp protease adaptor protein ClpS [Acetivibrio cellulolyticus CD2] gi|302589855|gb|EFL59627.1| ATP-dependent Clp protease adaptor protein ClpS [Acetivibrio cellulolyticus CD2] Length = 99 Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 38/80 (47%), Positives = 52/80 (65%) Query: 57 PKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMK 116 PK+Y+V+L+ND+YT MEFVI VL F+K+ A IML VH +G G G Y Y+IA K Sbjct: 18 PKMYKVILLNDDYTTMEFVIEVLIAVFHKNPTDATQIMLDVHEKGKGIVGAYTYDIACTK 77 Query: 117 VNQVMNYSRQHQYPLQCIME 136 + QV + + +PL +ME Sbjct: 78 IAQVEEMAIKRDFPLVTVME 97 >gi|257460421|ref|ZP_05625522.1| ATP-dependent Clp protease adaptor protein ClpS [Campylobacter gracilis RM3268] gi|257441752|gb|EEV16894.1| ATP-dependent Clp protease adaptor protein ClpS [Campylobacter gracilis RM3268] Length = 101 Score = 78.6 bits (192), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 36/90 (40%), Positives = 56/90 (62%) Query: 48 VRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGV 107 R +K VP+ Y+V+L+ND+ T M+FV+++L F K+ A +M+KVH QG CG Sbjct: 11 TRAKTKSFVPRPYKVILLNDDVTTMDFVVYILMEIFAKNFNDAVDLMMKVHKQGRAVCGA 70 Query: 108 YAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 Y EIAE K V+ ++ +PL+C +E+ Sbjct: 71 YPKEIAECKQQAVLQAAKAAGFPLRCEIEE 100 >gi|294672831|ref|YP_003573447.1| ATP-dependent Clp protease adaptor protein ClpS [Prevotella ruminicola 23] gi|294472147|gb|ADE81536.1| ATP-dependent Clp protease adaptor protein ClpS [Prevotella ruminicola 23] Length = 101 Score = 78.6 bits (192), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 32/88 (36%), Positives = 55/88 (62%) Query: 49 RFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVY 108 R + +R P+ Y+V + ND++T MEFV+ +L F+K A+ +ML+VHH G+Y Sbjct: 11 RQHTNLREPRRYKVTIYNDDFTTMEFVVKILTQVFFKSETEAEALMLQVHHSDKAVVGIY 70 Query: 109 AYEIAEMKVNQVMNYSRQHQYPLQCIME 136 +Y++A KV + N +R+ +PL+ +E Sbjct: 71 SYDVATSKVRKATNMAREEGFPLRLTVE 98 >gi|118475182|ref|YP_891885.1| ATP-dependent Clp protease adaptor protein ClpS [Campylobacter fetus subsp. fetus 82-40] gi|118414408|gb|ABK82828.1| ATP-dependent Clp protease adaptor protein ClpS [Campylobacter fetus subsp. fetus 82-40] Length = 99 Score = 78.6 bits (192), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 32/82 (39%), Positives = 55/82 (67%) Query: 57 PKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMK 116 P L++V+L+ND T M+FV+ +L + F K A +MLK+H G CG+Y EIA+ K Sbjct: 18 PNLFKVMLLNDEVTTMDFVVMILIDIFNKSKNEAIELMLKIHQSGRAICGIYTKEIAQTK 77 Query: 117 VNQVMNYSRQHQYPLQCIMEQK 138 +V+N ++ + +PL+C++E++ Sbjct: 78 QMEVLNLAKANGFPLKCVIEEE 99 >gi|255321468|ref|ZP_05362626.1| ATP-dependent Clp protease adaptor protein ClpS [Campylobacter showae RM3277] gi|255301324|gb|EET80583.1| ATP-dependent Clp protease adaptor protein ClpS [Campylobacter showae RM3277] Length = 103 Score = 78.2 bits (191), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 33/94 (35%), Positives = 59/94 (62%) Query: 45 DSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGE 104 + +V K P+ ++V+L+ND+ T M+FV+ VL F+ ++A +MLK+H++G G Sbjct: 10 ERDVAIKEKPEFPRKFKVILLNDDVTSMDFVVGVLVEIFHHTAQSAVAVMLKIHNEGSGV 69 Query: 105 CGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 G+Y EIA+ K NQ + + YPL+ ++E++ Sbjct: 70 AGIYNKEIAQTKQNQTLKAAAAAGYPLKAVVEEE 103 >gi|223040454|ref|ZP_03610728.1| ATP-dependent Clp protease adaptor protein ClpS [Campylobacter rectus RM3267] gi|222878304|gb|EEF13411.1| ATP-dependent Clp protease adaptor protein ClpS [Campylobacter rectus RM3267] Length = 103 Score = 78.2 bits (191), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 35/94 (37%), Positives = 60/94 (63%) Query: 45 DSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGE 104 + +V K P+ ++V+L+ND+ T M+FV+ VL F+ ++A +MLK+H++G G Sbjct: 10 ERDVALKEKPEFPRKFKVVLLNDDVTSMDFVVSVLVEIFHHTTQSAVTVMLKIHNEGSGI 69 Query: 105 CGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 GVYA EIA+ K + V+ + YPL+ I+E++ Sbjct: 70 AGVYAKEIAQTKQSDVLKAAAVAGYPLKAIIEEE 103 >gi|329120145|ref|ZP_08248815.1| ATP-dependent Clp protease adaptor protein ClpS [Neisseria bacilliformis ATCC BAA-1200] gi|327463676|gb|EGF09994.1| ATP-dependent Clp protease adaptor protein ClpS [Neisseria bacilliformis ATCC BAA-1200] Length = 101 Score = 77.8 bits (190), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 34/85 (40%), Positives = 52/85 (61%) Query: 53 KVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEI 112 K+R P+ Y V L+ND+YT M+FV VL F+ + A +ML VHH+G G CG + ++ Sbjct: 15 KLRPPRKYGVFLLNDDYTTMDFVAQVLTEVFFLSEDRAFAVMLLVHHEGKGLCGTFTRDV 74 Query: 113 AEMKVNQVMNYSRQHQYPLQCIMEQ 137 A+ K QV + +PL+C +E+ Sbjct: 75 AQTKQAQVHRRAADAGFPLKCTIEE 99 >gi|198275274|ref|ZP_03207805.1| hypothetical protein BACPLE_01433 [Bacteroides plebeius DSM 17135] gi|198271857|gb|EDY96127.1| hypothetical protein BACPLE_01433 [Bacteroides plebeius DSM 17135] Length = 102 Score = 77.8 bits (190), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 33/80 (41%), Positives = 53/80 (66%) Query: 57 PKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMK 116 PK Y+V+L ND++T M+FV+ VL+ F+K E A+ +MLKVH Q GVY+Y++A+ K Sbjct: 19 PKHYKVILHNDDFTTMDFVVKVLKIVFFKSQEEAEALMLKVHQQQSATAGVYSYDVAQSK 78 Query: 117 VNQVMNYSRQHQYPLQCIME 136 + +R+ +PL+ +E Sbjct: 79 AQKATQMAREEGFPLRLTVE 98 >gi|311694972|gb|ADP97845.1| ATP-dependent Clp protease adaptor protein ClpS [marine bacterium HP15] Length = 78 Score = 77.4 bits (189), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 37/75 (49%), Positives = 50/75 (66%) Query: 63 LLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMN 122 +L+ND+YTPM+FV+ VL FF + E A +ML VH QG CGVY +IAE K QV Sbjct: 2 VLLNDDYTPMDFVVDVLMKFFGMNEEKATQVMLLVHTQGKAVCGVYTRDIAETKAAQVNQ 61 Query: 123 YSRQHQYPLQCIMEQ 137 YS + ++PL C +E+ Sbjct: 62 YSSECEHPLLCEIER 76 >gi|183221238|ref|YP_001839234.1| ATP-dependent Clp protease adaptor protein Clp [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189911329|ref|YP_001962884.1| hypothetical protein LBF_1799 [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|238687770|sp|B0S9H9|CLPS_LEPBA RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|238687849|sp|B0SS68|CLPS_LEPBP RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|167776005|gb|ABZ94306.1| conserved hypothetical protein [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167779660|gb|ABZ97958.1| ATP-dependent Clp protease adaptor protein clp [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 113 Score = 77.4 bits (189), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 39/104 (37%), Positives = 62/104 (59%) Query: 30 SRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHET 89 S N+K +F+ L + + K++ P Y+V+L+ND+YTP EFV++VL F K + Sbjct: 2 SESNRKSYTDFNVELLEKEKQKKKLKKPDRYKVILINDDYTPQEFVVYVLAVVFRKSMDE 61 Query: 90 AKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQC 133 ++ IM + H +G CGVY+ +IA KV +V + +PLQC Sbjct: 62 SRQIMWRAHTEGSAVCGVYSLDIARTKVAEVHKLADDAGHPLQC 105 >gi|219855399|ref|YP_002472521.1| hypothetical protein CKR_2056 [Clostridium kluyveri NBRC 12016] gi|219569123|dbj|BAH07107.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 104 Score = 77.0 bits (188), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 38/90 (42%), Positives = 57/90 (63%), Gaps = 2/90 (2%) Query: 51 SSKVRV--PKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVY 108 +SKV + P +Y+V++ ND+YT MEFV++VL F K A IM VH +GIG G+Y Sbjct: 15 NSKVEIKRPPMYKVIIYNDDYTTMEFVVNVLVKIFKKSDVEAVQIMYDVHRKGIGIAGIY 74 Query: 109 AYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 Y+IA K Q ++ +R +PL+ ME++ Sbjct: 75 VYDIAVTKTAQAISMARNSGFPLKFSMEEE 104 >gi|300855650|ref|YP_003780634.1| ATP-dependent protease adaptor protein ClpS [Clostridium ljungdahlii DSM 13528] gi|300435765|gb|ADK15532.1| ATP-dependent protease adaptor protein ClpS [Clostridium ljungdahlii DSM 13528] Length = 99 Score = 77.0 bits (188), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 36/86 (41%), Positives = 53/86 (61%) Query: 53 KVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEI 112 K++ P +Y+V++ ND+YT MEFV+ VL F K A IM VH +GIG GVY Y+I Sbjct: 14 KIKPPSMYKVIIHNDDYTTMEFVVEVLIKIFEKSAVEATKIMYDVHRRGIGVAGVYVYDI 73 Query: 113 AEMKVNQVMNYSRQHQYPLQCIMEQK 138 A K+ Q + + +PL+ ME++ Sbjct: 74 AATKIMQAVKMAESSGFPLKFSMEEE 99 >gi|254462423|ref|ZP_05075839.1| ATP-dependent Clp protease adaptor protein ClpS [Rhodobacterales bacterium HTCC2083] gi|206679012|gb|EDZ43499.1| ATP-dependent Clp protease adaptor protein ClpS [Rhodobacteraceae bacterium HTCC2083] Length = 67 Score = 77.0 bits (188), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 34/67 (50%), Positives = 50/67 (74%) Query: 72 MEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPL 131 MEFV+ +L+ FF +H + IML VH +G+ GV++ EIAE KV QVM+++R+HQ+PL Sbjct: 1 MEFVVLILERFFGLNHAQSFEIMLTVHQKGVAVVGVFSQEIAETKVGQVMDFARRHQHPL 60 Query: 132 QCIMEQK 138 QC ME++ Sbjct: 61 QCTMEKE 67 >gi|153954954|ref|YP_001395719.1| ClpS [Clostridium kluyveri DSM 555] gi|146347812|gb|EDK34348.1| ClpS [Clostridium kluyveri DSM 555] Length = 99 Score = 76.6 bits (187), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 38/90 (42%), Positives = 57/90 (63%), Gaps = 2/90 (2%) Query: 51 SSKVRV--PKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVY 108 +SKV + P +Y+V++ ND+YT MEFV++VL F K A IM VH +GIG G+Y Sbjct: 10 NSKVEIKRPPMYKVIIYNDDYTTMEFVVNVLVKIFKKSDVEAVQIMYDVHRKGIGIAGIY 69 Query: 109 AYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 Y+IA K Q ++ +R +PL+ ME++ Sbjct: 70 VYDIAVTKTAQAISMARNSGFPLKFSMEEE 99 >gi|148653394|ref|YP_001280487.1| ATP-dependent Clp protease adaptor protein ClpS [Psychrobacter sp. PRwf-1] gi|148572478|gb|ABQ94537.1| ATP-dependent Clp protease adaptor protein ClpS [Psychrobacter sp. PRwf-1] Length = 140 Score = 76.6 bits (187), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 36/85 (42%), Positives = 55/85 (64%) Query: 52 SKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYE 111 ++ P +Y V++ ND+YTPMEFV++VLQ+ F + + A IML +H+QG G G+Y + Sbjct: 51 PEITEPPMYAVVMYNDDYTPMEFVVYVLQSEFRHNMDKAVEIMLNIHNQGRGIAGIYPKD 110 Query: 112 IAEMKVNQVMNYSRQHQYPLQCIME 136 IAE K +V +R+ YPL +E Sbjct: 111 IAETKAKKVNQTARKEGYPLLTQIE 135 >gi|323693039|ref|ZP_08107259.1| ATP-dependent Clp protease adaptor protein ClpS [Clostridium symbiosum WAL-14673] gi|323502920|gb|EGB18762.1| ATP-dependent Clp protease adaptor protein ClpS [Clostridium symbiosum WAL-14673] Length = 100 Score = 76.6 bits (187), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 36/87 (41%), Positives = 54/87 (62%) Query: 52 SKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYE 111 S+VRVPK Y V++ ND+YTPM+FV+ VL F K E A +M+ VH G G+Y+Y+ Sbjct: 13 SQVRVPKRYSVIMHNDDYTPMDFVVRVLMEIFNKRKEEAVMLMMMVHKGGKAVVGMYSYD 72 Query: 112 IAEMKVNQVMNYSRQHQYPLQCIMEQK 138 IA K+ V + + YP + +E++ Sbjct: 73 IALTKIRLVTALAEEEGYPFRLTVEEQ 99 >gi|323485967|ref|ZP_08091299.1| ATP-dependent Clp protease adaptor protein ClpS [Clostridium symbiosum WAL-14163] gi|323400729|gb|EGA93095.1| ATP-dependent Clp protease adaptor protein ClpS [Clostridium symbiosum WAL-14163] Length = 100 Score = 76.6 bits (187), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 36/87 (41%), Positives = 54/87 (62%) Query: 52 SKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYE 111 S+VRVPK Y V++ ND+YTPM+FV+ VL F K E A +M+ VH G G+Y+Y+ Sbjct: 13 SQVRVPKRYSVIMHNDDYTPMDFVVQVLMEIFNKRKEEAVMLMMMVHKGGKAVVGMYSYD 72 Query: 112 IAEMKVNQVMNYSRQHQYPLQCIMEQK 138 IA K+ V + + YP + +E++ Sbjct: 73 IALTKIRLVTALAEEEGYPFRLTVEEQ 99 >gi|239907009|ref|YP_002953750.1| ATP-dependent Clp protease adaptor protein ClpS [Desulfovibrio magneticus RS-1] gi|239796875|dbj|BAH75864.1| ATP-dependent Clp protease adaptor protein ClpS [Desulfovibrio magneticus RS-1] Length = 119 Score = 76.3 bits (186), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 40/85 (47%), Positives = 61/85 (71%) Query: 53 KVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEI 112 +VR P+ ++V+L ND+YT MEFV+ VL + F K+ A IML VH+ G+G CG+Y E+ Sbjct: 34 EVREPRQFKVMLHNDDYTTMEFVVLVLVSVFRKNENEATQIMLNVHNTGVGVCGIYTAEV 93 Query: 113 AEMKVNQVMNYSRQHQYPLQCIMEQ 137 AE+KV+ V ++++ YPL+C ME+ Sbjct: 94 AELKVSLVHRLAKENGYPLRCSMEE 118 >gi|302339654|ref|YP_003804860.1| ATP-dependent Clp protease adaptor protein ClpS [Spirochaeta smaragdinae DSM 11293] gi|301636839|gb|ADK82266.1| ATP-dependent Clp protease adaptor protein ClpS [Spirochaeta smaragdinae DSM 11293] Length = 103 Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 38/99 (38%), Positives = 60/99 (60%), Gaps = 8/99 (8%) Query: 46 SEVRFSSKV--------RVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKV 97 S+ RF +K+ R P +YRV+L+ND+YT M+FV+ V++ F+ E A IM V Sbjct: 2 SDFRFGTKLEDRSQEQYREPPMYRVILLNDDYTTMDFVVKVIRQVFHHSSEEAVKIMFDV 61 Query: 98 HHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIME 136 H +G G G Y+ +IA K QV+ ++ ++PL+C +E Sbjct: 62 HKKGKGLVGCYSQDIAVTKQRQVLVMAKSEEFPLRCEIE 100 >gi|226330747|ref|ZP_03806265.1| hypothetical protein PROPEN_04667 [Proteus penneri ATCC 35198] gi|225201542|gb|EEG83896.1| hypothetical protein PROPEN_04667 [Proteus penneri ATCC 35198] Length = 67 Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 35/66 (53%), Positives = 47/66 (71%) Query: 72 MEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPL 131 M+FV+ VL +F+ E A IML VHH+G G CGVY+ +IAE KV QV Y+R+++YPL Sbjct: 1 MDFVVEVLTMYFFLSEEKATQIMLDVHHKGKGVCGVYSADIAETKVAQVNLYARENEYPL 60 Query: 132 QCIMEQ 137 C +EQ Sbjct: 61 LCTLEQ 66 >gi|326560256|gb|EGE10644.1| ATP-dependent Clp protease adaptor protein ClpS [Moraxella catarrhalis 7169] gi|326566426|gb|EGE16576.1| ATP-dependent Clp protease adaptor protein ClpS [Moraxella catarrhalis BC1] Length = 121 Score = 75.5 bits (184), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 36/94 (38%), Positives = 60/94 (63%), Gaps = 2/94 (2%) Query: 45 DSEVRFSSKVRV--PKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGI 102 D++V +K++V PKLY V++ NDNYT M+FV++VL F + + A +M+++H G Sbjct: 26 DTDVITETKIQVKQPKLYTVIMYNDNYTTMDFVVYVLVEIFQHNIDKAYQLMMQIHELGQ 85 Query: 103 GECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIME 136 + Y++AEMKV++V + Q YPL ++E Sbjct: 86 AAVALLPYDLAEMKVDEVTALAEQESYPLLTMIE 119 >gi|296113266|ref|YP_003627204.1| ATP-dependent Clp protease adaptor protein ClpS [Moraxella catarrhalis RH4] gi|295920961|gb|ADG61312.1| ATP-dependent Clp protease adaptor protein ClpS [Moraxella catarrhalis RH4] gi|326570234|gb|EGE20279.1| ATP-dependent Clp protease adaptor protein ClpS [Moraxella catarrhalis BC8] Length = 112 Score = 75.5 bits (184), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 36/94 (38%), Positives = 59/94 (62%), Gaps = 2/94 (2%) Query: 45 DSEVRFSSKVRV--PKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGI 102 D++V +K++V PKLY V++ NDNYT M+FV++VL F + + A +M+++H G Sbjct: 17 DTDVITETKIQVKQPKLYTVIMYNDNYTTMDFVVYVLVEIFQHNIDKAYQLMMQIHELGQ 76 Query: 103 GECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIME 136 + Y++AEMKV++V + Q YPL +E Sbjct: 77 AAVALLPYDLAEMKVDEVTALAEQESYPLLTTIE 110 >gi|302671436|ref|YP_003831396.1| ATP-dependent Clp protease adaptor protein ClpS [Butyrivibrio proteoclasticus B316] gi|302395909|gb|ADL34814.1| ATP-dependent Clp protease adaptor protein ClpS [Butyrivibrio proteoclasticus B316] Length = 99 Score = 75.5 bits (184), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 30/89 (33%), Positives = 57/89 (64%) Query: 49 RFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVY 108 + S+++ P+ Y V+++ND++T M+FV+ +L + F+KD +A+ IML VH G G Y Sbjct: 10 KTGSRIKEPRQYNVIMLNDDFTTMDFVVSILVDIFHKDPVSAEAIMLGVHKSGQAVVGKY 69 Query: 109 AYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 Y+IA +VN + +++ +P + +E+ Sbjct: 70 PYDIAVTRVNNALARAKKEGFPFRMTVEE 98 >gi|118591833|ref|ZP_01549228.1| ATP-dependent Clp protease adaptor protein ClpS [Stappia aggregata IAM 12614] gi|118435476|gb|EAV42122.1| ATP-dependent Clp protease adaptor protein ClpS [Stappia aggregata IAM 12614] Length = 100 Score = 75.1 bits (183), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 33/85 (38%), Positives = 55/85 (64%) Query: 52 SKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYE 111 +KV+ PKLY+V+L+ND+YTP EFV+ +L+ F D A+ +M+ H +G+ VY + Sbjct: 14 TKVQRPKLYKVMLLNDDYTPREFVVLILKAEFRLDESQAEVVMMTAHQKGVCVVSVYPRD 73 Query: 112 IAEMKVNQVMNYSRQHQYPLQCIME 136 +AE K + ++ + + YPLQ +E Sbjct: 74 VAETKATRAIDAAVRLGYPLQFTVE 98 >gi|150018965|ref|YP_001311219.1| ATP-dependent Clp protease adaptor protein ClpS [Clostridium beijerinckii NCIMB 8052] gi|149905430|gb|ABR36263.1| ATP-dependent Clp protease adaptor protein ClpS [Clostridium beijerinckii NCIMB 8052] Length = 99 Score = 75.1 bits (183), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 35/84 (41%), Positives = 56/84 (66%) Query: 54 VRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIA 113 V+ PK Y+V++ ND+YT MEFVI++L F K A+ IML VH +G G G+Y+Y+IA Sbjct: 15 VKKPKNYKVVMYNDDYTTMEFVINILVVVFNKKLIDAEKIMLDVHERGKGIAGIYSYDIA 74 Query: 114 EMKVNQVMNYSRQHQYPLQCIMEQ 137 KV+ M+ +++ +P + +E+ Sbjct: 75 VTKVSTAMSMAKEKGFPFKLTVEE 98 >gi|161610776|ref|NP_946554.2| ATP-dependent Clp protease adaptor [Rhodopseudomonas palustris CGA009] gi|192289806|ref|YP_001990411.1| ATP-dependent Clp protease adaptor [Rhodopseudomonas palustris TIE-1] gi|67460483|sp|Q6NAI2|CLPS1_RHOPA RecName: Full=ATP-dependent Clp protease adapter protein ClpS 1 gi|192283555|gb|ACE99935.1| ATP-dependent Clp protease adaptor protein ClpS [Rhodopseudomonas palustris TIE-1] Length = 103 Score = 75.1 bits (183), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 34/90 (37%), Positives = 54/90 (60%), Gaps = 2/90 (2%) Query: 44 LDSEVRFSSKVRV--PKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQG 101 L + + +K++V PKL++V+LVND+YTP EFV+ VL+ F + A +ML H +G Sbjct: 6 LKPKTKAKAKIKVERPKLHKVILVNDDYTPREFVVSVLKGEFRMTEDQATKVMLTAHQRG 65 Query: 102 IGECGVYAYEIAEMKVNQVMNYSRQHQYPL 131 + GV+ ++AE K + + R YPL Sbjct: 66 VCVVGVFTKDVAETKATRATDAGRAKGYPL 95 >gi|326562900|gb|EGE13187.1| ATP-dependent Clp protease adaptor protein ClpS [Moraxella catarrhalis 46P47B1] gi|326565261|gb|EGE15446.1| ATP-dependent Clp protease adaptor protein ClpS [Moraxella catarrhalis 12P80B1] gi|326570971|gb|EGE20995.1| ATP-dependent Clp protease adaptor protein ClpS [Moraxella catarrhalis BC7] gi|326575834|gb|EGE25757.1| ATP-dependent Clp protease adaptor protein ClpS [Moraxella catarrhalis CO72] gi|326576916|gb|EGE26822.1| ATP-dependent Clp protease adaptor protein ClpS [Moraxella catarrhalis O35E] Length = 121 Score = 75.1 bits (183), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 36/94 (38%), Positives = 59/94 (62%), Gaps = 2/94 (2%) Query: 45 DSEVRFSSKVRV--PKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGI 102 D++V +K++V PKLY V++ NDNYT M+FV++VL F + + A +M+++H G Sbjct: 26 DTDVITETKIQVKQPKLYTVIMYNDNYTTMDFVVYVLVEIFQHNIDKAYQLMMQIHELGQ 85 Query: 103 GECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIME 136 + Y++AEMKV++V + Q YPL +E Sbjct: 86 AAVALLPYDLAEMKVDEVTALAEQESYPLLTTIE 119 >gi|262394728|ref|YP_003286582.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio sp. Ex25] gi|262338322|gb|ACY52117.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio sp. Ex25] Length = 67 Score = 75.1 bits (183), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 35/66 (53%), Positives = 47/66 (71%) Query: 72 MEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPL 131 M+FVI VL+ FF D + A IMLK+H++G CG Y+ EIAE KV QV Y+R++++PL Sbjct: 1 MDFVIEVLERFFSHDIDKATQIMLKIHYEGKAICGTYSAEIAETKVAQVTMYARENEHPL 60 Query: 132 QCIMEQ 137 C MEQ Sbjct: 61 LCTMEQ 66 >gi|93006502|ref|YP_580939.1| ATP-dependent Clp protease adaptor protein ClpS [Psychrobacter cryohalolentis K5] gi|92394180|gb|ABE75455.1| ATP-dependent Clp protease adaptor protein ClpS [Psychrobacter cryohalolentis K5] Length = 135 Score = 74.7 bits (182), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 38/107 (35%), Positives = 63/107 (58%), Gaps = 1/107 (0%) Query: 31 RMNKKGIAEFDNCLDSEVRFS-SKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHET 89 R+ + G E + ++V + +V P +Y V++ NDNYTPMEFV+++LQ+ F ++ Sbjct: 24 RLAQVGEPEGETAPQADVLVAEPEVAKPPMYAVVMYNDNYTPMEFVVYILQSEFRHSMDS 83 Query: 90 AKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIME 136 A IML +H+ G G+Y +IAE K +V + + + YPL +E Sbjct: 84 AVEIMLTIHNSSKGIAGIYPKDIAETKAKKVNSLAHREGYPLLTQIE 130 >gi|261210696|ref|ZP_05924988.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio sp. RC341] gi|260840181|gb|EEX66761.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio sp. RC341] Length = 67 Score = 74.7 bits (182), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 34/66 (51%), Positives = 46/66 (69%) Query: 72 MEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPL 131 M+FVI +L+ FF D E A +MLKVH++G CG + E+AE KV QV YSR++++PL Sbjct: 1 MDFVIEILERFFSMDIERATQVMLKVHYEGKAICGTFTAEVAETKVAQVTMYSRENEHPL 60 Query: 132 QCIMEQ 137 C MEQ Sbjct: 61 LCTMEQ 66 >gi|326563659|gb|EGE13911.1| ATP-dependent Clp protease adaptor protein ClpS [Moraxella catarrhalis 103P14B1] gi|326573267|gb|EGE23235.1| ATP-dependent Clp protease adaptor protein ClpS [Moraxella catarrhalis 101P30B1] Length = 112 Score = 73.9 bits (180), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 35/94 (37%), Positives = 58/94 (61%), Gaps = 2/94 (2%) Query: 45 DSEVRFSSKVRV--PKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGI 102 D++ +K++V PKLY V++ NDNYT M+FV++VL F + + A +M+++H G Sbjct: 17 DTDAITETKIQVKQPKLYTVIMYNDNYTTMDFVVYVLVEIFQHNIDKAYQLMMQIHELGQ 76 Query: 103 GECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIME 136 + Y++AEMKV++V + Q YPL +E Sbjct: 77 AAVALLPYDLAEMKVDEVTALAEQESYPLLTTIE 110 >gi|317010313|gb|ADU84060.1| ATP-dependent Clp protease adapter protein clpS [Helicobacter pylori SouthAfrica7] Length = 91 Score = 73.6 bits (179), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 33/85 (38%), Positives = 54/85 (63%) Query: 53 KVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEI 112 K+ P + +V+++ND+ T EFVI L++FF K + AK +ML +H G G CGVY Y+I Sbjct: 5 KIPTPTMSQVIMLNDSITTAEFVISALRDFFDKPLKEAKELMLSIHRDGEGVCGVYPYDI 64 Query: 113 AEMKVNQVMNYSRQHQYPLQCIMEQ 137 A + V + +R +PL+ ++E+ Sbjct: 65 ARYRAACVKDKARALNFPLRLLVEE 89 >gi|71066054|ref|YP_264781.1| ATP-dependent Clp protease adapter protein [Psychrobacter arcticus 273-4] gi|71039039|gb|AAZ19347.1| probable ATP-dependent Clp protease adapter protein [Psychrobacter arcticus 273-4] Length = 138 Score = 73.6 bits (179), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 37/107 (34%), Positives = 63/107 (58%), Gaps = 1/107 (0%) Query: 31 RMNKKGIAEFDNCLDSEVRFS-SKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHET 89 R+ + G + + ++V + +V P +Y V++ NDNYTPMEFV+++LQ+ F ++ Sbjct: 27 RLAQVGEPDGETTPQADVLVAEPEVAKPPMYAVVMYNDNYTPMEFVVYILQSEFRHSMDS 86 Query: 90 AKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIME 136 A IML +H+ G G+Y +IAE K +V + + + YPL +E Sbjct: 87 AVEIMLTIHNSSKGIAGIYPKDIAETKAKKVNSLAHREGYPLLTQIE 133 >gi|84501067|ref|ZP_00999302.1| ATP-dependent Clp protease adaptor protein ClpS [Oceanicola batsensis HTCC2597] gi|84391134|gb|EAQ03552.1| ATP-dependent Clp protease adaptor protein ClpS [Oceanicola batsensis HTCC2597] Length = 101 Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 32/99 (32%), Positives = 51/99 (51%) Query: 40 FDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHH 99 D + V +++ PKLY+V+L+ND++TP FV+ VLQ F A+ +M+ H Sbjct: 2 LDRAPEGTVETATRSERPKLYKVILLNDDFTPRRFVVKVLQGVFRMTEGEAEAVMMTAHR 61 Query: 100 QGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 +G V+ EIAE K + R +PL E++ Sbjct: 62 RGACVVAVFTREIAEQKAREATELGRHAGFPLTFTTERE 100 >gi|83633194|gb|ABC29161.1| uncharacterized conserved protein [Hahella chejuensis KCTC 2396] Length = 76 Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 34/74 (45%), Positives = 47/74 (63%) Query: 64 LVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNY 123 ++ND+YTPM+FV+ VL FF A +ML VH QG CGV+ +IAE K QV Y Sbjct: 1 MLNDDYTPMDFVVEVLIRFFNMSEPKATQVMLAVHTQGRAVCGVFTRDIAESKAAQVNQY 60 Query: 124 SRQHQYPLQCIMEQ 137 S + ++PL C +E+ Sbjct: 61 SSECEHPLLCEIER 74 >gi|254519310|ref|ZP_05131366.1| ATP-dependent Clp protease adaptor protein ClpS [Clostridium sp. 7_2_43FAA] gi|226913059|gb|EEH98260.1| ATP-dependent Clp protease adaptor protein ClpS [Clostridium sp. 7_2_43FAA] Length = 99 Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 30/86 (34%), Positives = 54/86 (62%) Query: 53 KVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEI 112 K++ PK + V++ ND++T MEFV+ +L + F + E A IM++VH G G G+Y Y+I Sbjct: 14 KIKKPKKFIVIMHNDDFTTMEFVVAILSDIFNRSIEEANKIMMEVHKNGKGVAGIYPYDI 73 Query: 113 AEMKVNQVMNYSRQHQYPLQCIMEQK 138 A K + M +++ +P + +E++ Sbjct: 74 AISKATKAMTLAKEEGFPFKLTVEEE 99 >gi|148925993|ref|ZP_01809679.1| hypothetical protein Cj8486_0964c [Campylobacter jejuni subsp. jejuni CG8486] gi|145845472|gb|EDK22564.1| hypothetical protein Cj8486_0964c [Campylobacter jejuni subsp. jejuni CG8486] Length = 82 Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 32/69 (46%), Positives = 48/69 (69%) Query: 52 SKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYE 111 +K+ PK+Y+V+L+ND+ T M+FVI +L N F+++ E A ML++HH G G CG+Y E Sbjct: 10 TKLSEPKMYKVILLNDDVTTMDFVIEILMNIFHQNLEKASQTMLEIHHNGSGICGIYTQE 69 Query: 112 IAEMKVNQV 120 IA K +V Sbjct: 70 IALSKQKKV 78 >gi|317011887|gb|ADU82495.1| ATP-dependent Clp protease adapter protein clpS [Helicobacter pylori Lithuania75] Length = 91 Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 32/84 (38%), Positives = 51/84 (60%) Query: 54 VRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIA 113 + P + +V++V+D T EFVI L++FF K E AK + +H G G CGVY Y+IA Sbjct: 6 IPTPTMAQVIMVDDPITTTEFVISALRDFFDKSLEEAKALTSSIHRDGCGVCGVYPYDIA 65 Query: 114 EMKVNQVMNYSRQHQYPLQCIMEQ 137 +V V + +R+ PL+ ++E+ Sbjct: 66 RHRVAWVRDKARELDLPLKLLVEE 89 >gi|207092784|ref|ZP_03240571.1| hypothetical protein HpylHP_08043 [Helicobacter pylori HPKX_438_AG0C1] Length = 91 Score = 72.0 bits (175), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 31/84 (36%), Positives = 51/84 (60%) Query: 54 VRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIA 113 + P + +V++V+D T EFVI L++FF K E AK + +H G G CGVY Y+IA Sbjct: 6 IPTPTMAQVIMVDDPITTAEFVISALRDFFDKSLEEAKALTSSIHRDGCGVCGVYPYDIA 65 Query: 114 EMKVNQVMNYSRQHQYPLQCIMEQ 137 + V + +R ++PL+ ++E+ Sbjct: 66 RHRAAWVKDKARALEFPLKLLVEE 89 >gi|315926527|gb|EFV05908.1| ATP-dependent Clp protease adaptor protein ClpS family protein [Campylobacter jejuni subsp. jejuni DFVF1099] Length = 106 Score = 72.0 bits (175), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 30/62 (48%), Positives = 45/62 (72%) Query: 52 SKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYE 111 +K+ PK+Y+V+L+ND+ T M+FVI +L N F+++ E A ML++HH G G CG+Y E Sbjct: 10 TKLSEPKMYKVILLNDDVTTMDFVIEILMNIFHQNLEKASQTMLEIHHNGSGICGIYTQE 69 Query: 112 IA 113 IA Sbjct: 70 IA 71 >gi|182419260|ref|ZP_02950513.1| ATP-dependent Clp protease adaptor protein ClpS [Clostridium butyricum 5521] gi|237667653|ref|ZP_04527637.1| ATP-dependent Clp protease adaptor protein ClpS [Clostridium butyricum E4 str. BoNT E BL5262] gi|182376900|gb|EDT74471.1| ATP-dependent Clp protease adaptor protein ClpS [Clostridium butyricum 5521] gi|237656001|gb|EEP53557.1| ATP-dependent Clp protease adaptor protein ClpS [Clostridium butyricum E4 str. BoNT E BL5262] Length = 99 Score = 72.0 bits (175), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 33/78 (42%), Positives = 49/78 (62%) Query: 60 YRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQ 119 Y+V++ ND+YT MEFVI +L N F K A+ IML VH +G G G+Y+Y+IA KV Sbjct: 21 YKVIMHNDDYTTMEFVIKILVNIFNKSFIDAEKIMLDVHKKGRGVAGIYSYDIAITKVAT 80 Query: 120 VMNYSRQHQYPLQCIMEQ 137 M+ ++ +P + E+ Sbjct: 81 AMSMAKSEGFPFKLTTEE 98 >gi|189463818|ref|ZP_03012603.1| hypothetical protein BACINT_00151 [Bacteroides intestinalis DSM 17393] gi|189438768|gb|EDV07753.1| hypothetical protein BACINT_00151 [Bacteroides intestinalis DSM 17393] Length = 102 Score = 72.0 bits (175), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 28/84 (33%), Positives = 52/84 (61%) Query: 52 SKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYE 111 + +R P+ ++V++ ND++T MEFV+ +L F+K A+ +ML+VH G+Y Y+ Sbjct: 14 TDLREPQHFKVIIFNDDFTTMEFVVKILTTIFFKSAAEAETLMLQVHKSQSAVVGIYTYD 73 Query: 112 IAEMKVNQVMNYSRQHQYPLQCIM 135 IA+ KV + +R+ +PL+ + Sbjct: 74 IAQSKVQKATRMAREENFPLRLTV 97 >gi|208434005|ref|YP_002265671.1| hypothetical protein HPG27_29 [Helicobacter pylori G27] gi|208431934|gb|ACI26805.1| hypothetical protein HPG27_29 [Helicobacter pylori G27] Length = 91 Score = 72.0 bits (175), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 31/84 (36%), Positives = 51/84 (60%) Query: 54 VRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIA 113 + P + +V++V+D T EFVI L++FF K E AK + +H G G CGVY Y+IA Sbjct: 6 IPTPTMAQVIMVDDPITTAEFVISALRDFFDKSLEEAKALTSSIHRDGEGVCGVYPYDIA 65 Query: 114 EMKVNQVMNYSRQHQYPLQCIMEQ 137 + V + +R ++PL+ ++E+ Sbjct: 66 RHRAAWVRDKARALEFPLKLLVEE 89 >gi|109946679|ref|YP_663907.1| hypothetical protein Hac_0045 [Helicobacter acinonychis str. Sheeba] gi|109713900|emb|CAJ98908.1| conserved hypothetical protein [Helicobacter acinonychis str. Sheeba] Length = 91 Score = 72.0 bits (175), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 34/85 (40%), Positives = 54/85 (63%) Query: 53 KVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEI 112 K+ +P + V+++ND T EFVI L++ F K E A+ +ML +HH G G CGVY YEI Sbjct: 5 KIPIPTMSGVIMLNDPVTKAEFVISTLRDVFDKSLEEAQDLMLSIHHNGDGVCGVYPYEI 64 Query: 113 AEMKVNQVMNYSRQHQYPLQCIMEQ 137 A K V + +R ++PL+ ++++ Sbjct: 65 AIYKAVCVRDKARALKFPLRLMVQE 89 >gi|210134229|ref|YP_002300668.1| ATP-dependent clp protease adapter protein ClpS [Helicobacter pylori P12] gi|210132197|gb|ACJ07188.1| ATP-dependent clp protease adapter protein ClpS [Helicobacter pylori P12] Length = 91 Score = 71.6 bits (174), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 31/84 (36%), Positives = 51/84 (60%) Query: 54 VRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIA 113 + +P + +V++V+D T EFVI L++FF K E AK + +H G G CGVY Y+IA Sbjct: 6 IPIPTMAQVIMVDDPITTAEFVISALRDFFDKSLEEAKALTSSIHRDGCGVCGVYPYDIA 65 Query: 114 EMKVNQVMNYSRQHQYPLQCIMEQ 137 + V + +R+ PL+ ++E+ Sbjct: 66 RHRAAWVRDKARELDLPLKLLVEE 89 >gi|160888888|ref|ZP_02069891.1| hypothetical protein BACUNI_01308 [Bacteroides uniformis ATCC 8492] gi|156861787|gb|EDO55218.1| hypothetical protein BACUNI_01308 [Bacteroides uniformis ATCC 8492] Length = 103 Score = 71.6 bits (174), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 30/83 (36%), Positives = 50/83 (60%) Query: 53 KVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEI 112 ++R P+ ++V + ND++T MEFV+ VL FYK A+ +ML+VH G+Y+Y+I Sbjct: 15 ELREPRRFKVTIYNDDFTTMEFVVKVLTTVFYKSSAEAETLMLQVHKSNSAVVGIYSYDI 74 Query: 113 AEMKVNQVMNYSRQHQYPLQCIM 135 A KV + +R +PL+ + Sbjct: 75 AHSKVQKATRMARNEGFPLRLTV 97 >gi|224535859|ref|ZP_03676398.1| hypothetical protein BACCELL_00723 [Bacteroides cellulosilyticus DSM 14838] gi|224522582|gb|EEF91687.1| hypothetical protein BACCELL_00723 [Bacteroides cellulosilyticus DSM 14838] Length = 102 Score = 71.2 bits (173), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 28/84 (33%), Positives = 52/84 (61%) Query: 52 SKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYE 111 + +R P+ ++V++ ND++T MEFV+ +L F+K A+ +ML+VH G+Y Y+ Sbjct: 14 TDLREPQHFKVIIYNDDFTTMEFVVKILTTIFFKSAAEAETLMLQVHKSQSAVVGIYTYD 73 Query: 112 IAEMKVNQVMNYSRQHQYPLQCIM 135 IA+ KV + +R+ +PL+ + Sbjct: 74 IAQSKVQKATRMAREENFPLRLTI 97 >gi|308182216|ref|YP_003926343.1| ATP-dependent Clp protease adapter protein clpS [Helicobacter pylori PeCan4] gi|308064401|gb|ADO06293.1| ATP-dependent Clp protease adapter protein clpS [Helicobacter pylori PeCan4] Length = 91 Score = 71.2 bits (173), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 31/84 (36%), Positives = 50/84 (59%) Query: 54 VRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIA 113 + P + +V++V+D T EFVI L++FF K E AK + +H G G CGVY Y+IA Sbjct: 6 IPTPTMAQVIMVDDPITTAEFVISALRDFFDKSLEEAKALTSSIHRDGCGVCGVYPYDIA 65 Query: 114 EMKVNQVMNYSRQHQYPLQCIMEQ 137 + V + +R+ PL+ ++E+ Sbjct: 66 RHRAAWVRDKARELDLPLKLLVEE 89 >gi|115523083|ref|YP_779994.1| ATP-dependent Clp protease adaptor [Rhodopseudomonas palustris BisA53] gi|115517030|gb|ABJ05014.1| ATP-dependent Clp protease adaptor protein ClpS [Rhodopseudomonas palustris BisA53] Length = 101 Score = 71.2 bits (173), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 32/80 (40%), Positives = 48/80 (60%) Query: 52 SKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYE 111 +KV PKL++V+LVND+YTP EFV+ VL+ F + A +M+ H +G+ V+ + Sbjct: 14 TKVERPKLHKVILVNDDYTPREFVVRVLKAEFRMTEDQAHKVMITAHQRGVCVVAVFTRD 73 Query: 112 IAEMKVNQVMNYSRQHQYPL 131 IAE K + + R YPL Sbjct: 74 IAETKATRATDAGRAKGYPL 93 >gi|108562455|ref|YP_626771.1| hypothetical protein HPAG1_0030 [Helicobacter pylori HPAG1] gi|107836228|gb|ABF84097.1| hypothetical protein HPAG1_0030 [Helicobacter pylori HPAG1] Length = 91 Score = 70.9 bits (172), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 31/84 (36%), Positives = 50/84 (59%) Query: 54 VRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIA 113 + P + +V++V+D T EFVI L++FF K E AK + +H G G CGVY Y+IA Sbjct: 6 IPTPTMAQVIMVDDPITTAEFVISALKDFFDKSLEEAKALTSSIHRDGCGVCGVYPYDIA 65 Query: 114 EMKVNQVMNYSRQHQYPLQCIMEQ 137 + V + +R+ PL+ ++E+ Sbjct: 66 RHRAAWVRDKARELDLPLKLLVEE 89 >gi|316932749|ref|YP_004107731.1| ATP-dependent Clp protease adaptor protein ClpS [Rhodopseudomonas palustris DX-1] gi|315600463|gb|ADU42998.1| ATP-dependent Clp protease adaptor protein ClpS [Rhodopseudomonas palustris DX-1] Length = 101 Score = 70.9 bits (172), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 33/88 (37%), Positives = 50/88 (56%) Query: 44 LDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIG 103 L + + KV PKL++V+LVND+YTP EFV+ VL+ + A +ML H +G+ Sbjct: 6 LKPKTKAKIKVERPKLHKVILVNDDYTPREFVVSVLKAELRMTEDQAYKVMLTAHQRGVC 65 Query: 104 ECGVYAYEIAEMKVNQVMNYSRQHQYPL 131 GV+ ++AE K + + R YPL Sbjct: 66 VVGVFTKDVAETKATRATDAGRAKGYPL 93 >gi|317008709|gb|ADU79289.1| ATP-dependent Clp protease adapter protein clpS [Helicobacter pylori India7] Length = 91 Score = 70.9 bits (172), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 32/84 (38%), Positives = 51/84 (60%) Query: 54 VRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIA 113 + P + +V++V+D T EFVI L++FF K E AK + +H G G CGVY Y+IA Sbjct: 6 IPTPTMVQVIMVDDPITTAEFVISALRDFFDKSLEEAKDLTSSIHRDGCGVCGVYPYDIA 65 Query: 114 EMKVNQVMNYSRQHQYPLQCIMEQ 137 +V V + +R+ PL+ ++E+ Sbjct: 66 RHRVAWVRDKARELDLPLKLLVEE 89 >gi|288929195|ref|ZP_06423040.1| ATP-dependent Clp protease adaptor protein ClpS [Prevotella sp. oral taxon 317 str. F0108] gi|288329297|gb|EFC67883.1| ATP-dependent Clp protease adaptor protein ClpS [Prevotella sp. oral taxon 317 str. F0108] Length = 109 Score = 70.9 bits (172), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 31/84 (36%), Positives = 53/84 (63%) Query: 49 RFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVY 108 R + +R P+ Y+VL+ ND++T M+FV+ +L+ F+K A+ +ML VH GVY Sbjct: 20 RIRTNLREPRKYKVLIHNDDFTTMDFVVMILKVVFFKSETEAEALMLAVHRSDKAVVGVY 79 Query: 109 AYEIAEMKVNQVMNYSRQHQYPLQ 132 +Y++A KV++ + +R YPL+ Sbjct: 80 SYDVAMSKVSKATDMARHAGYPLR 103 >gi|90422655|ref|YP_531025.1| ATP-dependent Clp protease adaptor [Rhodopseudomonas palustris BisB18] gi|90104669|gb|ABD86706.1| ATP-dependent Clp protease adaptor protein ClpS [Rhodopseudomonas palustris BisB18] Length = 105 Score = 70.5 bits (171), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 31/84 (36%), Positives = 47/84 (55%) Query: 48 VRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGV 107 + K PKL++V+LVND+YTP EFV+ VLQ F + A +M+ H +G+ V Sbjct: 14 TKVKPKTERPKLHKVILVNDDYTPREFVVRVLQAEFRMTEDQAHKVMITAHQRGVCVVAV 73 Query: 108 YAYEIAEMKVNQVMNYSRQHQYPL 131 + ++AE K + + R YPL Sbjct: 74 FTKDVAETKATRATDAGRAKGYPL 97 >gi|317181079|dbj|BAJ58865.1| hypothetical protein HPF32_1283 [Helicobacter pylori F32] Length = 91 Score = 70.5 bits (171), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 31/84 (36%), Positives = 50/84 (59%) Query: 54 VRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIA 113 + P + +V++V+D T EFVI L++FF K E AK + +H G G CGVY Y+IA Sbjct: 6 IPTPTMAQVIMVDDPITTAEFVISALRDFFDKSLEEAKALTSSIHRDGEGVCGVYPYDIA 65 Query: 114 EMKVNQVMNYSRQHQYPLQCIMEQ 137 + V + +R+ PL+ ++E+ Sbjct: 66 RHRAAWVRDKARELDLPLKLLVEE 89 >gi|254778767|ref|YP_003056872.1| ATP-dependent Clp protease adaptor protein ClpS [Helicobacter pylori B38] gi|254000678|emb|CAX28587.1| ATP-dependent Clp protease adaptor protein ClpS [Helicobacter pylori B38] Length = 91 Score = 70.5 bits (171), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 31/84 (36%), Positives = 51/84 (60%) Query: 54 VRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIA 113 + P + +V++V+D T EFVI L++FF K E AK + +H G G CGVY Y+IA Sbjct: 6 IPTPTMAQVIMVDDPITTTEFVISALRDFFDKSLEEAKDLTSSIHRDGEGVCGVYPYDIA 65 Query: 114 EMKVNQVMNYSRQHQYPLQCIMEQ 137 + V + +R ++PL+ ++E+ Sbjct: 66 RHRAAWVKDKARALEFPLKLLVEE 89 >gi|218681500|ref|ZP_03529387.1| ATP-dependent Clp protease adaptor [Rhizobium etli CIAT 894] Length = 112 Score = 70.5 bits (171), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 35/100 (35%), Positives = 58/100 (58%) Query: 37 IAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLK 96 +++ D L +++ K+ PKLY+V+LVND+YTP EFVI +L++ F ET +M+ Sbjct: 1 MSDNDVALKPKIKVKPKLDKPKLYKVILVNDDYTPREFVIVILKSVFRMSEETGYKVMMT 60 Query: 97 VHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIME 136 H G V A +IAE K + ++ +++ +PL E Sbjct: 61 AHKLGSCVVVVCARDIAETKAKEGIDLAKEMGFPLMFTTE 100 >gi|297379256|gb|ADI34143.1| ATP-dependent Clp protease adapter protein clpS [Helicobacter pylori v225d] Length = 91 Score = 70.5 bits (171), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 31/84 (36%), Positives = 51/84 (60%) Query: 54 VRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIA 113 + P + +V++V+D T EFVI L++FF K E A+ + +H G G CGVY Y+IA Sbjct: 6 IPTPTMVQVIMVDDPITTAEFVISALRDFFDKSLEEAQALTSSIHRDGEGVCGVYPYDIA 65 Query: 114 EMKVNQVMNYSRQHQYPLQCIMEQ 137 +V V + +R+ PL+ ++E+ Sbjct: 66 RHRVAWVRDKARELDLPLKLLVEE 89 >gi|15644665|ref|NP_206834.1| hypothetical protein HP0032 [Helicobacter pylori 26695] gi|2495581|sp|P56066|CLPS_HELPY RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|2313107|gb|AAD07101.1| conserved hypothetical protein [Helicobacter pylori 26695] Length = 91 Score = 70.5 bits (171), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 30/84 (35%), Positives = 51/84 (60%) Query: 54 VRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIA 113 + P + +V++V+D T EFVI L++FF K E AK + +H G G CGVY Y+IA Sbjct: 6 IPTPTMAQVIMVDDPITTTEFVISALRDFFDKSLEEAKALTSSIHRDGEGVCGVYPYDIA 65 Query: 114 EMKVNQVMNYSRQHQYPLQCIMEQ 137 + V + ++ ++PL+ ++E+ Sbjct: 66 RHRAAWVRDKAKALEFPLKLLVEE 89 >gi|270293657|ref|ZP_06199859.1| conserved hypothetical protein [Bacteroides sp. D20] gi|317479379|ref|ZP_07938513.1| ATP-dependent Clp protease adaptor protein ClpS [Bacteroides sp. 4_1_36] gi|270275124|gb|EFA20984.1| conserved hypothetical protein [Bacteroides sp. D20] gi|316904453|gb|EFV26273.1| ATP-dependent Clp protease adaptor protein ClpS [Bacteroides sp. 4_1_36] Length = 103 Score = 70.5 bits (171), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 30/83 (36%), Positives = 50/83 (60%) Query: 53 KVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEI 112 ++R P+ ++V + ND++T MEFV+ VL FYK A+ +ML+VH G+Y+Y+I Sbjct: 15 ELREPRRFKVTIYNDDFTTMEFVVKVLTTVFYKSSVEAETLMLQVHKSNSAVVGIYSYDI 74 Query: 113 AEMKVNQVMNYSRQHQYPLQCIM 135 A KV + +R +PL+ + Sbjct: 75 AHSKVQKATRMARNEGFPLRLTV 97 >gi|217031776|ref|ZP_03437280.1| hypothetical protein HPB128_155g89 [Helicobacter pylori B128] gi|298737083|ref|YP_003729613.1| ATP-dependent Clp protease adaptor protein ClpS [Helicobacter pylori B8] gi|216946623|gb|EEC25223.1| hypothetical protein HPB128_155g89 [Helicobacter pylori B128] gi|298356277|emb|CBI67149.1| ATP-dependent Clp protease adaptor protein ClpS [Helicobacter pylori B8] Length = 91 Score = 70.1 bits (170), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 30/84 (35%), Positives = 50/84 (59%) Query: 54 VRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIA 113 + P + +V++V+D T EFVI L++FF K E K + +H G G CGVY Y+IA Sbjct: 6 IPTPTMAQVIMVDDPITTAEFVISALKDFFDKSLEEVKALTSSIHRDGCGVCGVYPYDIA 65 Query: 114 EMKVNQVMNYSRQHQYPLQCIMEQ 137 + V + +R+ +PL+ ++E+ Sbjct: 66 RHRAAWVRDKARELDFPLKLLVEE 89 >gi|110634479|ref|YP_674687.1| ATP-dependent Clp protease adaptor [Mesorhizobium sp. BNC1] gi|110285463|gb|ABG63522.1| ATP-dependent Clp protease adaptor protein ClpS [Chelativorans sp. BNC1] Length = 101 Score = 70.1 bits (170), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 33/91 (36%), Positives = 51/91 (56%) Query: 41 DNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQ 100 D L + KV PKL++V+LVND++TP EFV+ VL+ F + + A +M+ H + Sbjct: 3 DIVLKPRTKTKPKVDKPKLHKVILVNDDFTPREFVVRVLKAEFRLNQDQAYRVMITAHRR 62 Query: 101 GIGECGVYAYEIAEMKVNQVMNYSRQHQYPL 131 G V+ +IAE K + + R+ YPL Sbjct: 63 GTCVVAVFPKDIAETKATRATDAGRKAGYPL 93 >gi|237750929|ref|ZP_04581409.1| ATP-dependent Clp protease adapter protein clpS [Helicobacter bilis ATCC 43879] gi|229373374|gb|EEO23765.1| ATP-dependent Clp protease adapter protein clpS [Helicobacter bilis ATCC 43879] Length = 107 Score = 70.1 bits (170), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 33/97 (34%), Positives = 55/97 (56%) Query: 39 EFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVH 98 E+ + E ++ P++ ++L+ND+YT ++FVI +L F K A+ I VH Sbjct: 7 EYSDSAHFETLHEVEIAQPRMQEIILLNDDYTSVDFVITLLMRVFNKSMLDAQTITQFVH 66 Query: 99 HQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIM 135 + G G CGVY Y+IAE+K + N+ R PL+ ++ Sbjct: 67 NTGEGSCGVYPYDIAELKFSMATNFIRDSGMPLRLVL 103 >gi|329961966|ref|ZP_08299977.1| ATP-dependent Clp protease adaptor protein ClpS [Bacteroides fluxus YIT 12057] gi|328530614|gb|EGF57472.1| ATP-dependent Clp protease adaptor protein ClpS [Bacteroides fluxus YIT 12057] Length = 102 Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 29/87 (33%), Positives = 51/87 (58%) Query: 49 RFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVY 108 R + +R P+ ++V + ND++T MEFV+ +L F+K A+ +M+KVH G+Y Sbjct: 11 RERTDLREPRRFKVTIYNDDFTTMEFVVKILTAVFFKSTAEAEALMMKVHESQSAVVGIY 70 Query: 109 AYEIAEMKVNQVMNYSRQHQYPLQCIM 135 Y+IA+ KV + +R +PL+ + Sbjct: 71 PYDIAQSKVQKATRMARNEGFPLRLTV 97 >gi|86748339|ref|YP_484835.1| ATP-dependent Clp protease adaptor [Rhodopseudomonas palustris HaA2] gi|86571367|gb|ABD05924.1| ATP-dependent Clp protease adaptor protein ClpS [Rhodopseudomonas palustris HaA2] Length = 101 Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 31/80 (38%), Positives = 48/80 (60%) Query: 52 SKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYE 111 K+ PKLY+V+LVND++TP +FV+ +L++ F E A +ML H +G+ V+ + Sbjct: 14 PKLERPKLYKVILVNDDFTPRDFVVMILKSEFRMTEEQAYKVMLTAHQRGVCVVAVFTKD 73 Query: 112 IAEMKVNQVMNYSRQHQYPL 131 IAE K + + R YPL Sbjct: 74 IAETKATRATDAGRAKGYPL 93 >gi|207110450|ref|ZP_03244612.1| hypothetical protein HpylH_15368 [Helicobacter pylori HPKX_438_CA4C1] Length = 82 Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 30/79 (37%), Positives = 47/79 (59%) Query: 54 VRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIA 113 + P + +V++V+D T EFVI L++FF K E AK + +H G G CGVY Y+IA Sbjct: 4 IPTPTMAQVIMVDDPITTAEFVISALRDFFDKSLEEAKALTSSIHRDGCGVCGVYPYDIA 63 Query: 114 EMKVNQVMNYSRQHQYPLQ 132 + V + +R ++PL+ Sbjct: 64 RHRAAWVKDKARALEFPLK 82 >gi|15966109|ref|NP_386462.1| ATP-dependent Clp protease adaptor [Sinorhizobium meliloti 1021] gi|21542319|sp|Q92N66|CLPS2_RHIME RecName: Full=ATP-dependent Clp protease adapter protein ClpS 2 gi|15075379|emb|CAC46935.1| Putative ATP-dependent Clp protease adapter protein clpS 2 [Sinorhizobium meliloti 1021] Length = 101 Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 33/91 (36%), Positives = 51/91 (56%) Query: 41 DNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQ 100 DN + ++ K+ PKLY+VLLVND++TP EFV+ VL+ F E +M+ H Sbjct: 3 DNDVAAKRLTKPKLERPKLYKVLLVNDDFTPREFVVMVLKAVFRMSEEAGYRVMMTAHKM 62 Query: 101 GIGECGVYAYEIAEMKVNQVMNYSRQHQYPL 131 GI V A ++AE K + + ++ +PL Sbjct: 63 GISVVVVCAKDVAETKAKEATDLGKEAGFPL 93 >gi|308183832|ref|YP_003927965.1| ATP-dependent Clp protease adapter protein clpS [Helicobacter pylori SJM180] gi|308059752|gb|ADO01648.1| ATP-dependent Clp protease adapter protein clpS [Helicobacter pylori SJM180] gi|317013455|gb|ADU80891.1| ATP-dependent Clp protease adapter protein ClpS [Helicobacter pylori Gambia94/24] Length = 91 Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 31/85 (36%), Positives = 55/85 (64%) Query: 53 KVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEI 112 ++ P + +V+++ND+ T EF++ L++FF K E A+ +ML +H G G CGVY YEI Sbjct: 5 QIPTPTMSQVIMLNDSITTAEFMVSALRDFFDKPLEEAQKLMLSIHRDGDGVCGVYPYEI 64 Query: 113 AEMKVNQVMNYSRQHQYPLQCIMEQ 137 A K V + +R ++PL+ ++++ Sbjct: 65 AIYKAVCVRDKARALRFPLRLMVQE 89 >gi|288870037|ref|ZP_06112699.2| ATP-dependent Clp protease adaptor protein ClpS [Clostridium hathewayi DSM 13479] gi|288868668|gb|EFD00967.1| ATP-dependent Clp protease adaptor protein ClpS [Clostridium hathewayi DSM 13479] Length = 111 Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 30/84 (35%), Positives = 53/84 (63%) Query: 53 KVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEI 112 +++ PK Y+V++ ND++TPM+ V+ +L + F K++E A IM+ VH GVY+Y+I Sbjct: 27 RLKQPKQYKVVMYNDDFTPMDVVVEILIDVFRKNYEEAVAIMMTVHKGQRAVVGVYSYDI 86 Query: 113 AEMKVNQVMNYSRQHQYPLQCIME 136 A K + + +R+ YP + +E Sbjct: 87 AMTKAARAVKIAREQGYPFRVEVE 110 >gi|260909905|ref|ZP_05916593.1| ATP-dependent Clp protease adaptor protein ClpS [Prevotella sp. oral taxon 472 str. F0295] gi|260635950|gb|EEX53952.1| ATP-dependent Clp protease adaptor protein ClpS [Prevotella sp. oral taxon 472 str. F0295] Length = 100 Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 30/84 (35%), Positives = 52/84 (61%) Query: 49 RFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVY 108 R + +R P+ Y+VL+ ND++T M+FV+ +L+ F+K A+ +ML VH GVY Sbjct: 11 RVHTNIREPRKYKVLIHNDDFTTMDFVVMILKVVFFKTDTEAETLMLTVHRSSQAVVGVY 70 Query: 109 AYEIAEMKVNQVMNYSRQHQYPLQ 132 +Y++A KV + + +R +PL+ Sbjct: 71 SYDVALSKVKKATDMARHAGFPLR 94 >gi|261838675|gb|ACX98441.1| hypothetical protein KHP_1249 [Helicobacter pylori 51] gi|317179574|dbj|BAJ57362.1| hypothetical protein HPF30_1265 [Helicobacter pylori F30] Length = 91 Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 30/84 (35%), Positives = 50/84 (59%) Query: 54 VRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIA 113 + P + +V++V+D T EFVI L++FF K E A+ + +H G G CGVY Y+IA Sbjct: 6 IPTPTMAQVIMVDDPITTAEFVISALRDFFDKSLEEAQALTSSIHRDGEGVCGVYPYDIA 65 Query: 114 EMKVNQVMNYSRQHQYPLQCIMEQ 137 + V + +R+ PL+ ++E+ Sbjct: 66 RHRAAWVRDKARELDLPLKLLVEE 89 >gi|317182602|dbj|BAJ60386.1| hypothetical protein HPF57_1312 [Helicobacter pylori F57] Length = 91 Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 30/84 (35%), Positives = 50/84 (59%) Query: 54 VRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIA 113 + P + +V++V+D T EFVI L++FF K E A+ + +H G G CGVY Y+IA Sbjct: 6 IPTPTMVQVIMVDDPITTAEFVISALRDFFDKSLEEAQALTSSIHRDGEGVCGVYPYDIA 65 Query: 114 EMKVNQVMNYSRQHQYPLQCIMEQ 137 + V + +R+ PL+ ++E+ Sbjct: 66 RHRAAWVRDKARELDLPLKLLVEE 89 >gi|307636717|gb|ADN79167.1| ATP-dependent Clp protease adaptor protein [Helicobacter pylori 908] gi|325995303|gb|ADZ50708.1| ATP-dependent Clp protease adaptor protein [Helicobacter pylori 2018] gi|325996901|gb|ADZ49109.1| ATP-dependent Clp protease adaptor protein [Helicobacter pylori 2017] Length = 89 Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 31/85 (36%), Positives = 55/85 (64%) Query: 53 KVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEI 112 ++ P + +V+++ND+ T EF++ L++FF K E A+ +ML +H G G CGVY YEI Sbjct: 3 QIPTPTMSQVIMLNDSITTAEFMVSALRDFFDKPLEEAQELMLSIHRDGDGVCGVYPYEI 62 Query: 113 AEMKVNQVMNYSRQHQYPLQCIMEQ 137 A K V + +R ++PL+ ++++ Sbjct: 63 AIYKAVCVRDKARALRFPLRLMVQE 87 >gi|317178096|dbj|BAJ55885.1| hypothetical protein HPF16_1288 [Helicobacter pylori F16] Length = 93 Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 30/84 (35%), Positives = 50/84 (59%) Query: 54 VRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIA 113 + P + +V++V+D T EFVI L++FF K E A+ + +H G G CGVY Y+IA Sbjct: 8 IPTPTMAQVIMVDDPITTAEFVISALRDFFDKSLEEAQALTSSIHRDGEGVCGVYPYDIA 67 Query: 114 EMKVNQVMNYSRQHQYPLQCIMEQ 137 + V + +R+ PL+ ++E+ Sbjct: 68 RHRAAWVRDKARELDLPLKLLVEE 91 >gi|150003219|ref|YP_001297963.1| hypothetical protein BVU_0633 [Bacteroides vulgatus ATCC 8482] gi|319640394|ref|ZP_07995118.1| hypothetical protein HMPREF9011_00715 [Bacteroides sp. 3_1_40A] gi|149931643|gb|ABR38341.1| conserved hypothetical protein [Bacteroides vulgatus ATCC 8482] gi|317387997|gb|EFV68852.1| hypothetical protein HMPREF9011_00715 [Bacteroides sp. 3_1_40A] Length = 102 Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 27/82 (32%), Positives = 49/82 (59%) Query: 54 VRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIA 113 +R P+ ++V + ND++T MEFV+ +L F+K A+ +M++VH G+Y Y+IA Sbjct: 16 LREPRRFKVTIFNDDFTTMEFVVKILTTVFFKSTMEAEALMMQVHKSESAVIGIYTYDIA 75 Query: 114 EMKVNQVMNYSRQHQYPLQCIM 135 KV + +R+ +PL+ + Sbjct: 76 RSKVQKATRMAREEGFPLRLTV 97 >gi|308061334|gb|ADO03222.1| ATP-dependent Clp protease adapter protein clpS [Helicobacter pylori Cuz20] Length = 91 Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 30/84 (35%), Positives = 50/84 (59%) Query: 54 VRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIA 113 + P + +V++V+D T EFVI L++FF K E A+ + +H G G CGVY Y+IA Sbjct: 6 IPTPTMAQVIMVDDPITTAEFVISALRDFFDKSLEEAQALTSSIHRDGEGICGVYPYDIA 65 Query: 114 EMKVNQVMNYSRQHQYPLQCIMEQ 137 + V + +R+ PL+ ++E+ Sbjct: 66 RHRAAWVRDKARELDLPLKLLVEE 89 >gi|254884992|ref|ZP_05257702.1| ATP-dependent Clp protease adapter protein clpS [Bacteroides sp. 4_3_47FAA] gi|294776011|ref|ZP_06741507.1| ATP-dependent Clp protease adaptor protein ClpS [Bacteroides vulgatus PC510] gi|254837785|gb|EET18094.1| ATP-dependent Clp protease adapter protein clpS [Bacteroides sp. 4_3_47FAA] gi|294450149|gb|EFG18653.1| ATP-dependent Clp protease adaptor protein ClpS [Bacteroides vulgatus PC510] Length = 107 Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 27/82 (32%), Positives = 49/82 (59%) Query: 54 VRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIA 113 +R P+ ++V + ND++T MEFV+ +L F+K A+ +M++VH G+Y Y+IA Sbjct: 21 LREPRRFKVTIFNDDFTTMEFVVKILTTVFFKSTMEAEALMMQVHKSESAVIGIYTYDIA 80 Query: 114 EMKVNQVMNYSRQHQYPLQCIM 135 KV + +R+ +PL+ + Sbjct: 81 RSKVQKATRMAREEGFPLRLTV 102 >gi|332180262|gb|AEE15950.1| ATP-dependent Clp protease adapter protein clpS [Treponema brennaborense DSM 12168] Length = 110 Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 35/107 (32%), Positives = 59/107 (55%) Query: 31 RMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETA 90 + N + E N +++ V +++ P+ V L+ND++T EFV+ VL F+K E A Sbjct: 3 KQNGNEVRETGNGVEAVVDSYNEIMEPRDCTVFLLNDDFTTKEFVVEVLTAIFHKGTEEA 62 Query: 91 KCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +M VH QG GVYA +IA + +R++ +PL+C +E+ Sbjct: 63 TVLMETVHMQGKAAVGVYARDIAVTLAALTVKTARENGFPLRCELEE 109 >gi|217034530|ref|ZP_03439940.1| hypothetical protein HP9810_897g15 [Helicobacter pylori 98-10] gi|216943011|gb|EEC22492.1| hypothetical protein HP9810_897g15 [Helicobacter pylori 98-10] Length = 97 Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 30/84 (35%), Positives = 50/84 (59%) Query: 54 VRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIA 113 + P + +V++V+D T EFVI L++FF K E A+ + +H G G CGVY Y+IA Sbjct: 12 IPTPTMAQVIMVDDPITTAEFVISALRDFFDKSLEEAQALTSSIHRDGEGVCGVYPYDIA 71 Query: 114 EMKVNQVMNYSRQHQYPLQCIMEQ 137 + V + +R+ PL+ ++E+ Sbjct: 72 RHRAAWVRDKARELDLPLKLLVEE 95 >gi|188526842|ref|YP_001909529.1| hypothetical protein HPSH_00160 [Helicobacter pylori Shi470] gi|188143082|gb|ACD47499.1| hypothetical protein HPSH_00160 [Helicobacter pylori Shi470] gi|308062902|gb|ADO04789.1| ATP-dependent Clp protease adapter protein clpS [Helicobacter pylori Sat464] Length = 91 Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 30/84 (35%), Positives = 50/84 (59%) Query: 54 VRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIA 113 + P + +V++V+D T EFVI L++FF K E A+ + +H G G CGVY Y+IA Sbjct: 6 IPTPTMAQVIMVDDPITTAEFVISALRDFFDKSLEEAQALTSNIHRDGEGVCGVYPYDIA 65 Query: 114 EMKVNQVMNYSRQHQYPLQCIMEQ 137 + V + +R+ PL+ ++E+ Sbjct: 66 RHRAAWVRDKARELDLPLKLLVEE 89 >gi|254456189|ref|ZP_05069618.1| ATP-dependent Clp protease adaptor protein ClpS [Candidatus Pelagibacter sp. HTCC7211] gi|207083191|gb|EDZ60617.1| ATP-dependent Clp protease adaptor protein ClpS [Candidatus Pelagibacter sp. HTCC7211] Length = 95 Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 33/95 (34%), Positives = 55/95 (57%) Query: 44 LDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIG 103 +++ RF + P LY V+ +ND T +EF+I VL++ F K+H+ A + K+H +G G Sbjct: 1 MNNSFRFETNFNNPILYEVIFLNDQVTTIEFIIRVLKHIFNKEHKHALKLTRKIHEEGYG 60 Query: 104 ECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 G Y YEIA K + +R +PL+ +++ K Sbjct: 61 VVGSYIYEIAGQKELETSLMARDENFPLRVVIKIK 95 >gi|209550349|ref|YP_002282266.1| ATP-dependent Clp protease adaptor [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209536105|gb|ACI56040.1| ATP-dependent Clp protease adaptor protein ClpS [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 103 Score = 68.2 bits (165), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 35/102 (34%), Positives = 57/102 (55%) Query: 37 IAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLK 96 +++ D L + + K+ PKLY+V+LVND+YTP EFVI +L+ F ET +M+ Sbjct: 1 MSDNDVALKPKTKVKPKLDKPKLYKVILVNDDYTPREFVIVILKAVFRMSEETGYRVMMT 60 Query: 97 VHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 H G V A +IAE K + ++ +++ +PL E + Sbjct: 61 AHKLGSCVVVVCARDIAETKAKEGIDLAKEMGFPLMFTTEPE 102 >gi|190892773|ref|YP_001979315.1| putative ATP-dependent Clp protease adaptor protein [Rhizobium etli CIAT 652] gi|190698052|gb|ACE92137.1| putative ATP-dependent Clp protease adaptor protein [Rhizobium etli CIAT 652] Length = 103 Score = 68.2 bits (165), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 35/98 (35%), Positives = 54/98 (55%) Query: 41 DNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQ 100 D L + + K+ PKLY+V+LVND+YTP EFVI +L+ F ET +M+ H Sbjct: 5 DVALKPKTKVEPKLDKPKLYKVILVNDDYTPREFVIAILKIVFRMSEETGYRVMMTAHKL 64 Query: 101 GIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 G V A +IAE K + ++ +++ +PL E + Sbjct: 65 GSCVVVVCAKDIAETKAKEGIDLAKEMGFPLMFTTEPE 102 >gi|237711936|ref|ZP_04542417.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA] gi|237725805|ref|ZP_04556286.1| conserved hypothetical protein [Bacteroides sp. D4] gi|265753171|ref|ZP_06088740.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA] gi|229435613|gb|EEO45690.1| conserved hypothetical protein [Bacteroides dorei 5_1_36/D4] gi|229454631|gb|EEO60352.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA] gi|263236357|gb|EEZ21852.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA] Length = 102 Score = 67.8 bits (164), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 26/79 (32%), Positives = 48/79 (60%) Query: 57 PKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMK 116 P+ ++V++ ND++T MEFV+ +L F+K A+ +M++VH G+Y Y+IA K Sbjct: 19 PRRFKVIIFNDDFTTMEFVVKILTTVFFKSTMEAEALMMQVHKSESAVVGIYTYDIARSK 78 Query: 117 VNQVMNYSRQHQYPLQCIM 135 V + +R+ +PL+ + Sbjct: 79 VQKATRMAREEGFPLRLTV 97 >gi|261840072|gb|ACX99837.1| ATP-dependent Clp protease adaptor protein ClpS [Helicobacter pylori 52] Length = 91 Score = 67.8 bits (164), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 30/84 (35%), Positives = 49/84 (58%) Query: 54 VRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIA 113 + P + +V++V+D T EFVI L++FF K E A+ + +H G G CGVY Y+IA Sbjct: 6 IPTPTMAQVIMVDDPITTAEFVISALRDFFDKSLEEAQALTSSIHRDGEGVCGVYPYDIA 65 Query: 114 EMKVNQVMNYSRQHQYPLQCIMEQ 137 + V + +R+ PL+ +E+ Sbjct: 66 RHRAAWVRDKARELDLPLKLWVEE 89 >gi|212691640|ref|ZP_03299768.1| hypothetical protein BACDOR_01135 [Bacteroides dorei DSM 17855] gi|212665829|gb|EEB26401.1| hypothetical protein BACDOR_01135 [Bacteroides dorei DSM 17855] Length = 107 Score = 67.8 bits (164), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 26/79 (32%), Positives = 48/79 (60%) Query: 57 PKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMK 116 P+ ++V++ ND++T MEFV+ +L F+K A+ +M++VH G+Y Y+IA K Sbjct: 24 PRRFKVIIFNDDFTTMEFVVKILTTVFFKSTMEAEALMIQVHKSESAVVGIYTYDIARSK 83 Query: 117 VNQVMNYSRQHQYPLQCIM 135 V + +R+ +PL+ + Sbjct: 84 VQKATRMAREEGFPLRLTV 102 >gi|300726156|ref|ZP_07059613.1| ATP-dependent Clp protease adaptor protein ClpS [Prevotella bryantii B14] gi|299776626|gb|EFI73179.1| ATP-dependent Clp protease adaptor protein ClpS [Prevotella bryantii B14] Length = 98 Score = 67.4 bits (163), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 32/92 (34%), Positives = 55/92 (59%) Query: 45 DSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGE 104 +S ++ K++ P+ Y+V+ ND+ T M+FVI VL F+K ++ A+ +M+KVH G Sbjct: 5 NSNIKERIKLKEPRRYQVIFFNDDVTTMDFVIEVLTTVFHKAYQEAEELMMKVHLNGSAV 64 Query: 105 CGVYAYEIAEMKVNQVMNYSRQHQYPLQCIME 136 GVY+Y+IA K + + +PL+ M+ Sbjct: 65 VGVYSYDIALTKTTNASEMAHKAGFPLRIEMQ 96 >gi|218460642|ref|ZP_03500733.1| ATP-dependent Clp protease adaptor [Rhizobium etli Kim 5] gi|218506911|ref|ZP_03504789.1| ATP-dependent Clp protease adaptor [Rhizobium etli Brasil 5] Length = 107 Score = 67.4 bits (163), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 35/102 (34%), Positives = 57/102 (55%) Query: 37 IAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLK 96 +++ D L + + K+ PKLY+V+LVND+YTP EFVI +L+ F ET +M+ Sbjct: 5 MSDNDVALKPKTKVKPKLDKPKLYKVILVNDDYTPREFVIVILKVVFRMSEETGYRVMMT 64 Query: 97 VHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 H G V A +IAE K + ++ +++ +PL E + Sbjct: 65 AHKLGSCVVVVCAKDIAETKAKEGIDLAKEMGFPLMFTTEPE 106 >gi|315587247|gb|ADU41628.1| ATP-dependent Clp protease adaptor protein ClpS [Helicobacter pylori 35A] Length = 91 Score = 67.4 bits (163), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 29/84 (34%), Positives = 50/84 (59%) Query: 54 VRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIA 113 + P + +V++V+D T EFVI L++FF K E A+ + +H G G CGVY Y+IA Sbjct: 6 IPTPTMAQVIMVDDPITTAEFVISALRDFFDKSLEEAQALTSSIHRDGEGVCGVYPYDIA 65 Query: 114 EMKVNQVMNYSRQHQYPLQCIMEQ 137 + V + +++ PL+ ++E+ Sbjct: 66 RHRAAWVRDKAKELDLPLRLLVEE 89 >gi|146339195|ref|YP_001204243.1| ATP-dependent Clp protease adaptor [Bradyrhizobium sp. ORS278] gi|146192001|emb|CAL76006.1| ATP-dependent Clp protease adaptor protein clpS 2 [Bradyrhizobium sp. ORS278] Length = 115 Score = 67.4 bits (163), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 30/98 (30%), Positives = 53/98 (54%) Query: 41 DNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQ 100 D + + +KV P+LY+V+LVND++TP +FV+ +L+ F + A +M+ H Sbjct: 17 DAVTKPKTKVRTKVERPRLYKVILVNDDFTPRDFVVMILKAEFRMTEDQAYKVMITAHKL 76 Query: 101 GIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 G+ V+ ++AE K + + R YPL +E + Sbjct: 77 GVCVVAVFTKDVAETKATRATDAGRAKGYPLLFTIEPE 114 >gi|218674100|ref|ZP_03523769.1| ATP-dependent Clp protease adaptor [Rhizobium etli GR56] gi|327188355|gb|EGE55572.1| ATP-dependent Clp protease adaptor [Rhizobium etli CNPAF512] Length = 103 Score = 67.4 bits (163), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 35/102 (34%), Positives = 57/102 (55%) Query: 37 IAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLK 96 +++ D L + + K+ PKLY+V+LVND+YTP EFVI +L+ F ET +M+ Sbjct: 1 MSDNDVALKPKTKVKPKLDKPKLYKVILVNDDYTPREFVIVILKVVFRMSEETGYRVMMT 60 Query: 97 VHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 H G V A +IAE K + ++ +++ +PL E + Sbjct: 61 AHKLGSCVVVVCAKDIAETKAKEGIDLAKEMGFPLMFTTEPE 102 >gi|307305663|ref|ZP_07585410.1| ATP-dependent Clp protease adaptor protein ClpS [Sinorhizobium meliloti BL225C] gi|307317666|ref|ZP_07597105.1| ATP-dependent Clp protease adaptor protein ClpS [Sinorhizobium meliloti AK83] gi|306896824|gb|EFN27571.1| ATP-dependent Clp protease adaptor protein ClpS [Sinorhizobium meliloti AK83] gi|306902366|gb|EFN32962.1| ATP-dependent Clp protease adaptor protein ClpS [Sinorhizobium meliloti BL225C] Length = 101 Score = 67.4 bits (163), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 32/91 (35%), Positives = 50/91 (54%) Query: 41 DNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQ 100 DN + ++ K+ PKLY+VLLVND++TP EFV+ VL+ F E +M+ H Sbjct: 3 DNDVAAKRLTKPKLERPKLYKVLLVNDDFTPREFVVMVLKAVFRMSEEAGYRVMMTAHKM 62 Query: 101 GIGECGVYAYEIAEMKVNQVMNYSRQHQYPL 131 G V A ++AE K + + ++ +PL Sbjct: 63 GTSVVVVCAKDVAETKAKEATDLGKEAGFPL 93 >gi|148253958|ref|YP_001238543.1| ATP-dependent Clp protease adaptor [Bradyrhizobium sp. BTAi1] gi|146406131|gb|ABQ34637.1| ATP-dependent Clp protease adaptor protein clpS 2 [Bradyrhizobium sp. BTAi1] Length = 115 Score = 67.0 bits (162), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 30/98 (30%), Positives = 53/98 (54%) Query: 41 DNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQ 100 D + + +KV P+LY+V+LVND++TP +FV+ +L++ F + A +M+ H Sbjct: 17 DAVTKPKTKVRTKVERPRLYKVILVNDDFTPRDFVVMILKSEFRMTEDQAYKVMITAHKL 76 Query: 101 GIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 G+ V+ ++AE K + + R YPL E + Sbjct: 77 GVCVVAVFTKDVAETKATRATDAGRAKGYPLLFTTEPE 114 >gi|86358632|ref|YP_470524.1| ATP-dependent Clp protease adaptor [Rhizobium etli CFN 42] gi|86282734|gb|ABC91797.1| hypothetical conserved protein [Rhizobium etli CFN 42] Length = 103 Score = 67.0 bits (162), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 35/102 (34%), Positives = 57/102 (55%) Query: 37 IAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLK 96 +++ D L + + K+ PKLY+V+LVND+YTP EFVI +L+ F ET +M+ Sbjct: 1 MSDNDVALKPKTKVRPKLDKPKLYKVILVNDDYTPREFVIVILKVVFRMSEETGYRVMMT 60 Query: 97 VHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 H G V A +IAE K + ++ +++ +PL E + Sbjct: 61 AHKLGSCVVVVCAKDIAETKAKEGIDLAKEMGFPLMFTTEPE 102 >gi|260462566|ref|ZP_05810773.1| ATP-dependent Clp protease adaptor protein ClpS [Mesorhizobium opportunistum WSM2075] gi|259031762|gb|EEW33031.1| ATP-dependent Clp protease adaptor protein ClpS [Mesorhizobium opportunistum WSM2075] Length = 101 Score = 67.0 bits (162), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 28/75 (37%), Positives = 45/75 (60%) Query: 57 PKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMK 116 PKLY+V+L+ND++TP EFV+ VL+ F + A IM+ H +G+ V+ ++AE K Sbjct: 19 PKLYKVILINDDFTPREFVVTVLKGEFKLSEDQAHRIMITAHQRGVCVVAVFTRDVAETK 78 Query: 117 VNQVMNYSRQHQYPL 131 + + + YPL Sbjct: 79 ATRATDAGKAKGYPL 93 >gi|319781851|ref|YP_004141327.1| ATP-dependent Clp protease adaptor protein ClpS [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317167739|gb|ADV11277.1| ATP-dependent Clp protease adaptor protein ClpS [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 101 Score = 67.0 bits (162), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 29/89 (32%), Positives = 49/89 (55%) Query: 48 VRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGV 107 + +V PKLY+V+L+ND++TP EFV+ VL+ F + A +M+ H +G+ V Sbjct: 10 TQIKPQVERPKLYKVILINDDFTPREFVVTVLKGEFKLSEDQAHRVMITAHRRGVCVVAV 69 Query: 108 YAYEIAEMKVNQVMNYSRQHQYPLQCIME 136 + ++AE K + + + YPL E Sbjct: 70 FTKDVAETKATRATDAGKAKGYPLMFTTE 98 >gi|91975795|ref|YP_568454.1| ATP-dependent Clp protease adaptor [Rhodopseudomonas palustris BisB5] gi|91682251|gb|ABE38553.1| ATP-dependent Clp protease adaptor protein ClpS [Rhodopseudomonas palustris BisB5] Length = 101 Score = 67.0 bits (162), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 30/84 (35%), Positives = 48/84 (57%) Query: 48 VRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGV 107 + K+ PKL++V+LVND++TP EFV+ +L+ F E A +ML H +G+ V Sbjct: 10 TKAKPKLERPKLHKVILVNDDFTPREFVVMILKAEFRMTEEQAYKVMLTAHQRGVCVVAV 69 Query: 108 YAYEIAEMKVNQVMNYSRQHQYPL 131 + ++AE K + + R YPL Sbjct: 70 FTKDVAETKATRATDAGRVKGYPL 93 >gi|241205734|ref|YP_002976830.1| ATP-dependent Clp protease adaptor [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240859624|gb|ACS57291.1| ATP-dependent Clp protease adaptor protein ClpS [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 103 Score = 66.6 bits (161), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 34/95 (35%), Positives = 53/95 (55%) Query: 37 IAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLK 96 +++ D L + + K+ PKLY+V+LVND+YTP E VI +L+ F ET +M+ Sbjct: 1 MSDNDIALKPKTKVKPKLDKPKLYKVILVNDDYTPRELVIMILKAVFRMSEETGYRVMMT 60 Query: 97 VHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPL 131 H G V A +IAE K + ++ ++ YPL Sbjct: 61 AHKLGSCVVVVCAKDIAETKAKEGIDLAKGMGYPL 95 >gi|13472441|ref|NP_104008.1| ATP-dependent Clp protease adaptor [Mesorhizobium loti MAFF303099] gi|21542322|sp|Q98HS2|CLPS2_RHILO RecName: Full=ATP-dependent Clp protease adapter protein ClpS 2 gi|14023187|dbj|BAB49794.1| mll2736 [Mesorhizobium loti MAFF303099] Length = 101 Score = 66.6 bits (161), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 28/75 (37%), Positives = 45/75 (60%) Query: 57 PKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMK 116 PKLY+V+L+ND++TP EFV+ VL+ F + A IM+ H +G+ V+ ++AE K Sbjct: 19 PKLYKVILINDDFTPREFVVTVLKGEFKLSEDQAHRIMITAHRRGVCVVAVFTKDVAETK 78 Query: 117 VNQVMNYSRQHQYPL 131 + + + YPL Sbjct: 79 ATRATDAGKAKGYPL 93 >gi|227822866|ref|YP_002826838.1| ATP-dependent Clp protease adaptor [Sinorhizobium fredii NGR234] gi|227341867|gb|ACP26085.1| ATP-dependent Clp protease adaptor protein ClpS [Sinorhizobium fredii NGR234] Length = 103 Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 35/100 (35%), Positives = 52/100 (52%), Gaps = 6/100 (6%) Query: 45 DSEVRFSSKVRV------PKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVH 98 D+EV K RV P+LY+V+LVND+YTP +FV+ VL+ F E +M+ H Sbjct: 3 DNEVAPKRKTRVKPKLERPRLYKVILVNDDYTPRDFVVMVLKAIFRMSEEAGYRVMMTAH 62 Query: 99 HQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 G V A +IAE K + + ++ +PL E + Sbjct: 63 KLGTSVVVVCARDIAETKAKEATDLGKEAGFPLMFTTEPE 102 >gi|218661878|ref|ZP_03517808.1| ATP-dependent Clp protease adaptor [Rhizobium etli IE4771] Length = 107 Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 34/102 (33%), Positives = 57/102 (55%) Query: 37 IAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLK 96 +++ D L + + K+ PKLY+V+LVND+YTP +FVI +L+ F ET +M+ Sbjct: 5 MSDNDVALKPKTKVKPKLDKPKLYKVILVNDDYTPRDFVIVILKVVFRMSEETGYRVMMT 64 Query: 97 VHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 H G V A +IAE K + ++ +++ +PL E + Sbjct: 65 AHKLGSCVVVVCAKDIAETKAKEGIDLAKEMGFPLMFTTEPE 106 >gi|222086600|ref|YP_002545134.1| hypothetical protein Arad_3194 [Agrobacterium radiobacter K84] gi|221724048|gb|ACM27204.1| conserved hypothetical protein [Agrobacterium radiobacter K84] Length = 103 Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 33/85 (38%), Positives = 47/85 (55%) Query: 54 VRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIA 113 V PKLY+++LVND+YTP EFVI VLQ F E +M+ H G V A +IA Sbjct: 18 VERPKLYKIILVNDDYTPREFVIMVLQAVFRMSEEAGYRVMMTAHKLGSCVVMVCARDIA 77 Query: 114 EMKVNQVMNYSRQHQYPLQCIMEQK 138 E K + ++ ++ +PL E + Sbjct: 78 ETKAQEAIDLAKSADFPLMFTTEPE 102 >gi|307944237|ref|ZP_07659578.1| ATP-dependent Clp protease adaptor protein ClpS [Roseibium sp. TrichSKD4] gi|307772583|gb|EFO31803.1| ATP-dependent Clp protease adaptor protein ClpS [Roseibium sp. TrichSKD4] Length = 101 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 33/96 (34%), Positives = 54/96 (56%) Query: 41 DNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQ 100 D+ L + K+ PK Y+V+L+ND++TP EFV+ VL+ F D A+ +M H + Sbjct: 3 DSDLKTRKSIRQKLERPKRYQVILLNDDFTPAEFVVFVLKGEFRLDVLQAEHVMETAHKK 62 Query: 101 GIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIME 136 G Y ++AE KV++ + + YPL+ I+E Sbjct: 63 GANVVSTYPRDVAETKVSRATETAVRMGYPLKFIVE 98 >gi|15611099|ref|NP_222750.1| hypothetical protein jhp0028 [Helicobacter pylori J99] gi|12230796|sp|Q9ZN32|CLPS_HELPJ RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|4154533|gb|AAD05612.1| putative [Helicobacter pylori J99] Length = 90 Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 31/85 (36%), Positives = 55/85 (64%), Gaps = 1/85 (1%) Query: 53 KVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEI 112 ++ P + +V+++ND+ T EF++ L++FF K E A+ +ML +H G G CGVY YEI Sbjct: 5 QIPTPTMSQVIMLNDSITTAEFMVSALRDFFDKPLEEAQKLMLSIHRDGDGVCGVYPYEI 64 Query: 113 AEMKVNQVMNYSRQHQYPLQCIMEQ 137 A K V + +R ++PL+ ++++ Sbjct: 65 AIYKAVCVRDKARA-RFPLRLMVQE 88 >gi|297180171|gb|ADI16393.1| uncharacterized conserved protein [uncultured bacterium HF130_12L15] Length = 101 Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 27/86 (31%), Positives = 50/86 (58%) Query: 46 SEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGEC 105 S + K+ P+L++V+L ND++TP EFV+ VL+ F + + A+ +M+ H +G Sbjct: 8 SRTKVKPKIERPRLHKVILFNDDFTPREFVVMVLKAEFGMNADQAQQVMITAHRRGACVV 67 Query: 106 GVYAYEIAEMKVNQVMNYSRQHQYPL 131 V+ ++AE K + + R+ +PL Sbjct: 68 AVFTKDVAETKATRATDAGRKMGFPL 93 >gi|288801352|ref|ZP_06406806.1| ATP-dependent Clp protease adaptor protein ClpS [Prevotella sp. oral taxon 299 str. F0039] gi|288331735|gb|EFC70219.1| ATP-dependent Clp protease adaptor protein ClpS [Prevotella sp. oral taxon 299 str. F0039] Length = 101 Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 28/91 (30%), Positives = 55/91 (60%), Gaps = 2/91 (2%) Query: 49 RFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVY 108 + + K+ P+ Y++L+ ND T M+FV+H+L + F K+ A +M+ +H +G GVY Sbjct: 11 KINQKISEPRKYKILMYNDEVTTMDFVVHLLMHVFNKNKAVAYELMMTIHQKGSALVGVY 70 Query: 109 AYEIAEMKVNQVMNYSRQHQYPL--QCIMEQ 137 +Y++A+ K+ Q +PL +C++++ Sbjct: 71 SYDVAQTKMEQAKEIIAHSGFPLVIKCLIDK 101 >gi|150397465|ref|YP_001327932.1| ATP-dependent Clp protease adaptor [Sinorhizobium medicae WSM419] gi|150028980|gb|ABR61097.1| ATP-dependent Clp protease adaptor protein ClpS [Sinorhizobium medicae WSM419] Length = 101 Score = 63.9 bits (154), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 29/75 (38%), Positives = 42/75 (56%) Query: 57 PKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMK 116 PKLY+VLLVND+YTP EFV+ VL+ F E +M+ H G V ++AE K Sbjct: 19 PKLYKVLLVNDDYTPREFVVMVLKAIFRMSEEAGYRVMMTAHKLGTSVVVVCEKDVAETK 78 Query: 117 VNQVMNYSRQHQYPL 131 + + ++ +PL Sbjct: 79 AKEATDLGKEAGFPL 93 >gi|116253218|ref|YP_769056.1| ATP-dependent Clp protease adaptor [Rhizobium leguminosarum bv. viciae 3841] gi|115257866|emb|CAK08964.1| putative ATP-dependent CLP protease adaptor protein [Rhizobium leguminosarum bv. viciae 3841] Length = 103 Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 33/102 (32%), Positives = 55/102 (53%) Query: 37 IAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLK 96 +++ D L + + K+ PKLY+V+LVND+YTP E VI +L+ F+ ET +M+ Sbjct: 1 MSDNDIALKPKAKVKLKLDKPKLYKVILVNDDYTPRELVIMILKAVFHMSEETGYRVMMT 60 Query: 97 VHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 H G V +IAE K + ++ ++ +PL E + Sbjct: 61 AHKLGSCVVVVCVRDIAETKAKEGIDLAKGMGFPLMFTTEPE 102 >gi|39648126|emb|CAE26646.1| conserved hypothetical protein [Rhodopseudomonas palustris CGA009] Length = 78 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 27/69 (39%), Positives = 40/69 (57%) Query: 63 LLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMN 122 +LVND+YTP EFV+ VL+ F + A +ML H +G+ GV+ ++AE K + + Sbjct: 2 ILVNDDYTPREFVVSVLKGEFRMTEDQATKVMLTAHQRGVCVVGVFTKDVAETKATRATD 61 Query: 123 YSRQHQYPL 131 R YPL Sbjct: 62 AGRAKGYPL 70 >gi|15889508|ref|NP_355189.1| ATP-dependent Clp protease adaptor [Agrobacterium tumefaciens str. C58] gi|24638422|sp|Q8UD95|CLPS2_AGRT5 RecName: Full=ATP-dependent Clp protease adapter protein ClpS 2 gi|15157382|gb|AAK87974.1| ATP-dependent Clp protease adaptor protein ClpS [Agrobacterium tumefaciens str. C58] Length = 103 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 29/82 (35%), Positives = 45/82 (54%) Query: 57 PKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMK 116 PKLY+V+L+ND+YTP EFV VL+ F +T + +M+ H G V +IAE K Sbjct: 21 PKLYKVMLLNDDYTPREFVTVVLKAVFRMSEDTGRRVMMTAHRFGSAVVVVCERDIAETK 80 Query: 117 VNQVMNYSRQHQYPLQCIMEQK 138 + + ++ +PL E + Sbjct: 81 AKEATDLGKEAGFPLMFTTEPE 102 >gi|75674828|ref|YP_317249.1| ATP-dependent Clp protease adaptor [Nitrobacter winogradskyi Nb-255] gi|74419698|gb|ABA03897.1| ATP-dependent Clp protease adaptor protein ClpS [Nitrobacter winogradskyi Nb-255] Length = 101 Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 31/98 (31%), Positives = 50/98 (51%) Query: 41 DNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQ 100 D + ++ +K+ P+LY+V+L ND++TP EFV+ VL F A +M+ Sbjct: 3 DIAIKPRIKAETKIERPRLYKVILHNDDFTPREFVVAVLMAEFNMTDGQAHKVMITADRL 62 Query: 101 GIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 G GV+A +IAE K + + R +PL E + Sbjct: 63 GSCVVGVFARDIAETKATRATDAGRSMGFPLLFTTEPE 100 >gi|222149341|ref|YP_002550298.1| ATP-dependent Clp protease adaptor [Agrobacterium vitis S4] gi|221736325|gb|ACM37288.1| conserved hypothetical protein [Agrobacterium vitis S4] Length = 103 Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 31/93 (33%), Positives = 50/93 (53%) Query: 46 SEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGEC 105 +V+ K+ P+LY+V+L ND+YTP EFV VL+ F ET +M+ H G Sbjct: 10 PKVKTRPKLEQPRLYKVILTNDDYTPREFVTIVLKAVFRMSEETGNRVMMTAHRFGSAVV 69 Query: 106 GVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 V +IAE K + + +++ +PL +E + Sbjct: 70 VVCTRDIAETKSTEANDLAKEAGFPLLFTIEPE 102 >gi|283797982|ref|ZP_06347135.1| ATP-dependent Clp protease adaptor protein ClpS [Clostridium sp. M62/1] gi|291074282|gb|EFE11646.1| ATP-dependent Clp protease adaptor protein ClpS [Clostridium sp. M62/1] gi|295090086|emb|CBK76193.1| Uncharacterized conserved protein [Clostridium cf. saccharolyticum K10] Length = 99 Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 29/85 (34%), Positives = 52/85 (61%) Query: 53 KVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEI 112 K++ P LY V++ ND++T M+FV+ +L F+K+HE A +M+ VH+ G Y+Y+I Sbjct: 14 KLKKPSLYHVVMHNDDFTTMDFVVEILMTIFHKEHEEAVALMMLVHNIQRAVVGTYSYDI 73 Query: 113 AEMKVNQVMNYSRQHQYPLQCIMEQ 137 A K + +R+ +P + +E+ Sbjct: 74 ARTKAEEAEERAREQGFPFRLSVEE 98 >gi|27377747|ref|NP_769276.1| ATP-dependent Clp protease adaptor [Bradyrhizobium japonicum USDA 110] gi|37077101|sp|Q89RX6|CLPS1_BRAJA RecName: Full=ATP-dependent Clp protease adapter protein ClpS 1 gi|27350892|dbj|BAC47901.1| bll2636 [Bradyrhizobium japonicum USDA 110] Length = 101 Score = 61.2 bits (147), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 28/78 (35%), Positives = 43/78 (55%) Query: 54 VRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIA 113 V PKL++V+L+ND+YTP EFV +L+ F + A +M+ H G V+ ++A Sbjct: 16 VERPKLHKVILINDDYTPREFVTMILKAEFRMTEDQAYKVMITAHKLGACVVAVFTRDVA 75 Query: 114 EMKVNQVMNYSRQHQYPL 131 E K + + R YPL Sbjct: 76 ETKATRATDAGRAKGYPL 93 >gi|254503767|ref|ZP_05115918.1| ATP-dependent Clp protease adaptor protein ClpS [Labrenzia alexandrii DFL-11] gi|222439838|gb|EEE46517.1| ATP-dependent Clp protease adaptor protein ClpS [Labrenzia alexandrii DFL-11] Length = 77 Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 27/76 (35%), Positives = 44/76 (57%) Query: 63 LLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMN 122 +L+ND+YTP EFV+ +L+ F D A +ML H +G VY ++AE K + ++ Sbjct: 2 VLLNDDYTPREFVVLILKGEFRLDSAQADVVMLTAHQKGACVVSVYPKDVAETKATRAID 61 Query: 123 YSRQHQYPLQCIMEQK 138 + + YPLQ +E + Sbjct: 62 AAGRLGYPLQFSVEPE 77 >gi|94272507|ref|ZP_01292136.1| ATP-dependent Clp protease adaptor protein ClpS [delta proteobacterium MLMS-1] gi|93450106|gb|EAT01450.1| ATP-dependent Clp protease adaptor protein ClpS [delta proteobacterium MLMS-1] Length = 58 Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 26/56 (46%), Positives = 37/56 (66%) Query: 83 FYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 F+ D A IM+ VH +G+G GVY + AE KV V N +R+H+YPL+C +EQ+ Sbjct: 3 FHHDQAAAHRIMMNVHREGVGVAGVYPRDSAETKVAMVHNLARKHEYPLKCSLEQE 58 >gi|325293590|ref|YP_004279454.1| ATP-dependent Clp protease adaptor [Agrobacterium sp. H13-3] gi|325061443|gb|ADY65134.1| ATP-dependent Clp protease adaptor [Agrobacterium sp. H13-3] Length = 104 Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 28/82 (34%), Positives = 45/82 (54%) Query: 57 PKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMK 116 PKLY+V+L+ND+YTP +FV VL+ F+ +T +M+ H G V +IAE K Sbjct: 22 PKLYKVILLNDDYTPRDFVTLVLKVVFHMGEDTGHRVMMTAHRFGSAVVVVCERDIAETK 81 Query: 117 VNQVMNYSRQHQYPLQCIMEQK 138 + + ++ +PL E + Sbjct: 82 AKEANDLGKEAGFPLMFTTEPE 103 >gi|92116383|ref|YP_576112.1| ATP-dependent Clp protease adaptor [Nitrobacter hamburgensis X14] gi|91799277|gb|ABE61652.1| ATP-dependent Clp protease adaptor protein ClpS [Nitrobacter hamburgensis X14] Length = 101 Score = 58.2 bits (139), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 27/91 (29%), Positives = 44/91 (48%) Query: 41 DNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQ 100 D + + P+L++V+L ND+YTP EFV+ VL F + A +M+ H Sbjct: 3 DTAIKPRTNVEPRTERPRLHKVILHNDDYTPREFVVTVLMAEFGLTEDQAHKVMITAHRL 62 Query: 101 GIGECGVYAYEIAEMKVNQVMNYSRQHQYPL 131 G V+ ++AE K + + R +PL Sbjct: 63 GCCVVAVFTRDVAETKATRATDAGRAMGFPL 93 >gi|159899721|ref|YP_001545968.1| ATP-dependent Clp protease adaptor protein ClpS [Herpetosiphon aurantiacus ATCC 23779] gi|159892760|gb|ABX05840.1| ATP-dependent Clp protease adaptor protein ClpS [Herpetosiphon aurantiacus ATCC 23779] Length = 113 Score = 58.2 bits (139), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 34/103 (33%), Positives = 52/103 (50%), Gaps = 2/103 (1%) Query: 36 GIAEFDNCLDSEVRFS--SKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCI 93 AE D E+ F S + K YRV+L ND+ TPME V+ VL+ F + E AK I Sbjct: 8 ATAEPQTTTDVELDFITLSDEELEKPYRVILQNDDITPMEVVVWVLEKVFEQSFEQAKRI 67 Query: 94 MLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIME 136 M++ H +G + ++ A +V + +R +PL +E Sbjct: 68 MIEAHVKGHALVTILPFKEASARVYSAQSRARDMGFPLVLFLE 110 >gi|219848162|ref|YP_002462595.1| ATP-dependent Clp protease adaptor protein ClpS [Chloroflexus aggregans DSM 9485] gi|219542421|gb|ACL24159.1| ATP-dependent Clp protease adaptor protein ClpS [Chloroflexus aggregans DSM 9485] Length = 107 Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 29/79 (36%), Positives = 48/79 (60%) Query: 58 KLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKV 117 + YRV++ ND+ TPM+FV+ VL+ FF D A+ +ML H++G V ++ A+ +V Sbjct: 26 RPYRVIVQNDDVTPMDFVVIVLRVFFGLDLARAEQVMLTAHYEGRALVTVLPFQEAQERV 85 Query: 118 NQVMNYSRQHQYPLQCIME 136 Q + +R+ YPL +E Sbjct: 86 YQAHHAAREAGYPLTFYLE 104 >gi|295115732|emb|CBL36579.1| Uncharacterized conserved protein [butyrate-producing bacterium SM4/1] Length = 99 Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 28/85 (32%), Positives = 52/85 (61%) Query: 53 KVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEI 112 K++ P LY V++ ND++T M+FV+ +L F+K+HE A +M+ VH+ G Y+Y+I Sbjct: 14 KLKKPSLYHVVMHNDDFTTMDFVVEILMTIFHKEHEEAVALMMLVHNIQRAVVGTYSYDI 73 Query: 113 AEMKVNQVMNYSRQHQYPLQCIMEQ 137 A + + +R+ +P + +E+ Sbjct: 74 ARTRAEEAEERAREQGFPFRLSVEE 98 >gi|156743978|ref|YP_001434107.1| ATP-dependent Clp protease adaptor protein ClpS [Roseiflexus castenholzii DSM 13941] gi|156235306|gb|ABU60089.1| ATP-dependent Clp protease adaptor protein ClpS [Roseiflexus castenholzii DSM 13941] Length = 109 Score = 57.4 bits (137), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 29/79 (36%), Positives = 44/79 (55%) Query: 58 KLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKV 117 + YRV++ ND+ TPM+FV+ VL F E + IML+ HH G YE A+ +V Sbjct: 28 RPYRVIIENDDVTPMDFVVLVLLTIFELGFEQSVAIMLEAHHNGRAHVVTLPYEEAQRRV 87 Query: 118 NQVMNYSRQHQYPLQCIME 136 + + +R+ YPL +E Sbjct: 88 YEAHHAAREAGYPLSFYLE 106 >gi|309791687|ref|ZP_07686179.1| ATP-dependent Clp protease adaptor protein ClpS [Oscillochloris trichoides DG6] gi|308226309|gb|EFO80045.1| ATP-dependent Clp protease adaptor protein ClpS [Oscillochloris trichoides DG6] Length = 107 Score = 57.4 bits (137), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 30/79 (37%), Positives = 43/79 (54%) Query: 58 KLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKV 117 K YRV++ ND+ TPM+FV+ VL+ FF A +ML HHQG +E A+ +V Sbjct: 26 KPYRVIVENDDVTPMDFVVMVLRLFFGLALNDAMQVMLTAHHQGRALVTTMPFEEAKERV 85 Query: 118 NQVMNYSRQHQYPLQCIME 136 +R+ YPL +E Sbjct: 86 YSAHTVAREEGYPLTFYLE 104 >gi|148656369|ref|YP_001276574.1| ATP-dependent Clp protease adaptor protein ClpS [Roseiflexus sp. RS-1] gi|148568479|gb|ABQ90624.1| ATP-dependent Clp protease adaptor protein ClpS [Roseiflexus sp. RS-1] Length = 113 Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 28/79 (35%), Positives = 44/79 (55%) Query: 58 KLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKV 117 + YRV++ ND+ TPM+FV+ +L F E + IML+ HH G YE A+ +V Sbjct: 32 RPYRVIIENDDVTPMDFVVLILLTIFELGFEQSVAIMLEAHHNGRAHVVTLPYEEAQRRV 91 Query: 118 NQVMNYSRQHQYPLQCIME 136 + + +R+ YPL +E Sbjct: 92 YEAHHAAREAGYPLSFYLE 110 >gi|163848160|ref|YP_001636204.1| ATP-dependent Clp protease adaptor protein ClpS [Chloroflexus aurantiacus J-10-fl] gi|222526063|ref|YP_002570534.1| ATP-dependent Clp protease adaptor protein ClpS [Chloroflexus sp. Y-400-fl] gi|163669449|gb|ABY35815.1| ATP-dependent Clp protease adaptor protein ClpS [Chloroflexus aurantiacus J-10-fl] gi|222449942|gb|ACM54208.1| ATP-dependent Clp protease adaptor protein ClpS [Chloroflexus sp. Y-400-fl] Length = 108 Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 29/79 (36%), Positives = 47/79 (59%) Query: 58 KLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKV 117 + YRV++ ND+ TPM+FV+ VL+ FF D A+ +ML H++G V + A+ +V Sbjct: 26 RPYRVIVQNDDVTPMDFVVIVLRVFFGLDLARAEQVMLTAHYEGRALVTVLPLQEAQERV 85 Query: 118 NQVMNYSRQHQYPLQCIME 136 Q + +R+ YPL +E Sbjct: 86 YQAHHAAREAGYPLTFYLE 104 >gi|149192136|ref|ZP_01870358.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio shilonii AK1] gi|148834039|gb|EDL51054.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio shilonii AK1] Length = 45 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 23/44 (52%), Positives = 31/44 (70%) Query: 94 MLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 ML VH++G CG Y E+AE KV QV YSR++++PL C ME+ Sbjct: 1 MLAVHYEGKAVCGTYTSEVAETKVAQVTMYSRENEHPLLCTMEK 44 >gi|214090057|gb|ACJ63449.1| putative ATP-dependent Clp protease adaptor protein [Ochrobactrum sp. 11a] Length = 64 Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 20/31 (64%), Positives = 24/31 (77%) Query: 48 VRFSSKVRVPKLYRVLLVNDNYTPMEFVIHV 78 R K + P LYRVLL+ND+YTPMEFV+HV Sbjct: 34 TRTQPKTKKPSLYRVLLLNDDYTPMEFVVHV 64 >gi|224419090|ref|ZP_03657096.1| hypothetical protein HcanM9_07438 [Helicobacter canadensis MIT 98-5491] Length = 41 Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 19/40 (47%), Positives = 28/40 (70%) Query: 98 HHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 HH G G CG+Y Y+IAE K QV +++ Q+PL+ I+E+ Sbjct: 1 HHNGRGMCGIYPYDIAETKAMQVRKMAKEKQFPLRAILEK 40 >gi|261886350|ref|ZP_06010389.1| ATP-dependent Clp protease adaptor protein ClpS [Campylobacter fetus subsp. venerealis str. Azul-94] Length = 76 Score = 47.8 bits (112), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 22/58 (37%), Positives = 33/58 (56%) Query: 57 PKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAE 114 P L++V+L+ND T M+FV+ +L + F K A +M+K H G C EIA+ Sbjct: 18 PNLFKVMLLNDEVTTMDFVVMILIDIFNKSKNEAIELMVKNHQSGRAICRFSTKEIAQ 75 >gi|87311880|ref|ZP_01093992.1| hypothetical protein DSM3645_04770 [Blastopirellula marina DSM 3645] gi|87285411|gb|EAQ77333.1| hypothetical protein DSM3645_04770 [Blastopirellula marina DSM 3645] Length = 123 Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust. Identities = 32/99 (32%), Positives = 49/99 (49%), Gaps = 12/99 (12%) Query: 46 SEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLK--VHHQGIG 103 ++ R +K + P Y V+L ND+ +FVI L+ F +E KC+ L VH QG Sbjct: 25 TDARNQTKRQPP--YVVILHNDDINTFDFVIETLRKVF--GYELEKCLQLTINVHKQGRS 80 Query: 104 ECGVYAYEIAEMKVNQVMNYSRQHQ------YPLQCIME 136 A E+AE+KV+Q+ + Q PL+ +E Sbjct: 81 AIWSGALEVAELKVDQIRSRGADPQMKSKGALPLRVTLE 119 >gi|149192135|ref|ZP_01870357.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio shilonii AK1] gi|148834038|gb|EDL51053.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio shilonii AK1] Length = 60 Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust. Identities = 17/33 (51%), Positives = 26/33 (78%) Query: 52 SKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFY 84 +KV P +Y V+L ND+YTPM+FV+ +L+ FF+ Sbjct: 20 TKVEPPAMYNVVLNNDDYTPMDFVVEILERFFH 52 >gi|320103498|ref|YP_004179089.1| ATP-dependent Clp protease adaptor protein ClpS [Isosphaera pallida ATCC 43644] gi|319750780|gb|ADV62540.1| ATP-dependent Clp protease adaptor protein ClpS [Isosphaera pallida ATCC 43644] Length = 124 Score = 44.3 bits (103), Expect = 0.005, Method: Compositional matrix adjust. Identities = 22/78 (28%), Positives = 41/78 (52%) Query: 46 SEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGEC 105 + R +K R Y V+++ND E+VI +L F TA+ + ++H +G+ Sbjct: 26 TSTRGLTKTRQLPRYHVIILNDEEHTFEYVIDLLTKVFRHSRPTAEALTWQIHTRGMAIV 85 Query: 106 GVYAYEIAEMKVNQVMNY 123 E+AE+K +QV+++ Sbjct: 86 YTTHKELAELKRDQVLSW 103 >gi|168702735|ref|ZP_02735012.1| ATP-dependent Clp protease adaptor protein ClpS [Gemmata obscuriglobus UQM 2246] Length = 110 Score = 44.3 bits (103), Expect = 0.006, Method: Compositional matrix adjust. Identities = 27/85 (31%), Positives = 46/85 (54%), Gaps = 9/85 (10%) Query: 60 YRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCI--MLKVHHQGIGECGVYAYEIAEMKV 117 Y V+L ND+ M+FV+ VL+ F + KC+ ML+ H QG + A E+AE+K Sbjct: 26 YAVVLHNDDTNTMDFVVTVLRKVF--GYTVEKCVELMLEAHTQGKVAVWIGALEVAELKA 83 Query: 118 NQVMNYS-----RQHQYPLQCIMEQ 137 +Q+ ++ ++ +PL +E Sbjct: 84 DQIKSFGPDPHVTKNGHPLGVTVEP 108 >gi|37520315|ref|NP_923692.1| ATP-dependent Clp protease adaptor protein ClpS [Gloeobacter violaceus PCC 7421] gi|39930962|sp|Q7NML9|CLPS_GLOVI RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|35211308|dbj|BAC88687.1| gsl0746 [Gloeobacter violaceus PCC 7421] Length = 93 Score = 43.9 bits (102), Expect = 0.006, Method: Compositional matrix adjust. Identities = 26/57 (45%), Positives = 35/57 (61%), Gaps = 1/57 (1%) Query: 59 LYRVLLVNDNYTPMEFVIHVLQNFFYKDHET-AKCIMLKVHHQGIGECGVYAYEIAE 114 LY+VLL ND++TPM +VI VL K + A+ IML+ H+ G+ V A E AE Sbjct: 18 LYKVLLHNDDHTPMNYVIEVLMKTIPKMQPSKARKIMLEAHNGGVAVVIVCALEHAE 74 >gi|224419091|ref|ZP_03657097.1| ATP-dependent Clp protease, adaptor protein ClpS [Helicobacter canadensis MIT 98-5491] Length = 58 Score = 43.1 bits (100), Expect = 0.012, Method: Compositional matrix adjust. Identities = 20/54 (37%), Positives = 34/54 (62%) Query: 42 NCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIML 95 N +++ K++ P Y+V+L+ND+YT +FVI +LQ F+K E + +ML Sbjct: 5 NQIENATETLEKLQEPIRYKVILLNDDYTTQDFVIEILQKVFHKGFEESLNLML 58 >gi|56750848|ref|YP_171549.1| ATP-dependent Clp protease adaptor protein ClpS [Synechococcus elongatus PCC 6301] gi|81596329|sp|Q5N3U1|CLPS_SYNP6 RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|56685807|dbj|BAD79029.1| hypothetical protein [Synechococcus elongatus PCC 6301] Length = 91 Score = 42.4 bits (98), Expect = 0.023, Method: Compositional matrix adjust. Identities = 26/80 (32%), Positives = 41/80 (51%), Gaps = 1/80 (1%) Query: 51 SSKVRVPKLYRVLLVNDNYTPMEFVIHVL-QNFFYKDHETAKCIMLKVHHQGIGECGVYA 109 ++K ++ YRVLL ND++ PME+V+ VL Q A IM++ H G G Sbjct: 12 TTKRKIAPRYRVLLHNDDFNPMEYVVMVLMQTVPSLTQPQAVDIMMEAHTNGTGLVITCD 71 Query: 110 YEIAEMKVNQVMNYSRQHQY 129 E AE Q+ ++ + Q+ Sbjct: 72 IEPAEFYCEQLKSHGLEQQH 91 >gi|223936983|ref|ZP_03628891.1| ATP-dependent Clp protease adaptor protein ClpS [bacterium Ellin514] gi|223894264|gb|EEF60717.1| ATP-dependent Clp protease adaptor protein ClpS [bacterium Ellin514] Length = 101 Score = 41.2 bits (95), Expect = 0.046, Method: Compositional matrix adjust. Identities = 29/93 (31%), Positives = 46/93 (49%) Query: 32 MNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAK 91 M + E ++ E + +SK + Y V+ ND M++V HV Q F + + A+ Sbjct: 1 MAETATPEIMPDVEQEEQAASKSELEPGYLVVCWNDPVNLMDYVSHVFQKVFGWNRQKAE 60 Query: 92 CIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYS 124 ML+VH+QG + E AE V+Q+ YS Sbjct: 61 QHMLEVHNQGKSVLVRESMEKAEHFVHQLQKYS 93 >gi|57335897|emb|CAH25350.1| hypothetical protein [Guillardia theta] Length = 233 Score = 40.8 bits (94), Expect = 0.059, Method: Compositional matrix adjust. Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 1/67 (1%) Query: 49 RFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYK-DHETAKCIMLKVHHQGIGECGV 107 R S K K Y+VLL ND+ ++VI L + + AK I + H+ G+ GV Sbjct: 149 RPSDKTDPGKKYKVLLFNDDKNTRQYVIDTLMKYIPGMTADKAKEITVAAHNTGMAIVGV 208 Query: 108 YAYEIAE 114 + YE+AE Sbjct: 209 WMYEMAE 215 >gi|209523998|ref|ZP_03272550.1| ATP-dependent Clp protease adaptor protein ClpS [Arthrospira maxima CS-328] gi|209495670|gb|EDZ95973.1| ATP-dependent Clp protease adaptor protein ClpS [Arthrospira maxima CS-328] Length = 117 Score = 40.8 bits (94), Expect = 0.066, Method: Compositional matrix adjust. Identities = 25/77 (32%), Positives = 38/77 (49%), Gaps = 1/77 (1%) Query: 49 RFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYK-DHETAKCIMLKVHHQGIGECGV 107 + S+ ++ YRVLL ND+Y PME+V+ VL + A IM++ H G+ Sbjct: 32 KTSTNRKLAPRYRVLLHNDDYNPMEYVVQVLMSTVPGLTQPQAVSIMMEAHTNGLALVIT 91 Query: 108 YAYEIAEMKVNQVMNYS 124 A E AE + N+ Sbjct: 92 CALEHAEFYCETLKNHG 108 >gi|81299501|ref|YP_399709.1| ATP-dependent Clp protease adaptor protein ClpS [Synechococcus elongatus PCC 7942] gi|123728228|sp|Q31QE7|CLPS_SYNE7 RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|81168382|gb|ABB56722.1| conserved hypothetical protein [Synechococcus elongatus PCC 7942] Length = 95 Score = 40.4 bits (93), Expect = 0.086, Method: Compositional matrix adjust. Identities = 25/74 (33%), Positives = 38/74 (51%), Gaps = 1/74 (1%) Query: 51 SSKVRVPKLYRVLLVNDNYTPMEFVIHVL-QNFFYKDHETAKCIMLKVHHQGIGECGVYA 109 ++K ++ YRVLL ND++ PME+V+ VL Q A IM++ H G G Sbjct: 12 TTKRKIAPRYRVLLHNDDFNPMEYVVMVLMQTVPSLTQPQAVDIMMEAHTNGTGLVITCD 71 Query: 110 YEIAEMKVNQVMNY 123 E AE Q+ ++ Sbjct: 72 IEPAEFYCEQLKSH 85 >gi|323359749|ref|YP_004226145.1| hypothetical protein MTES_3301 [Microbacterium testaceum StLB037] gi|323276120|dbj|BAJ76265.1| uncharacterized conserved protein [Microbacterium testaceum StLB037] Length = 102 Score = 40.0 bits (92), Expect = 0.10, Method: Compositional matrix adjust. Identities = 20/68 (29%), Positives = 33/68 (48%) Query: 57 PKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMK 116 P ++ ++ ND M +V HV + +F D TA+ +ML VHH G E+ E Sbjct: 25 PSSWQTVVWNDPVNLMSYVSHVFRTYFGFDSATAERLMLAVHHDGHAVVARGPREVMEAH 84 Query: 117 VNQVMNYS 124 + + +Y Sbjct: 85 THAMHDYG 92 >gi|158338702|ref|YP_001519879.1| ATP-dependent Clp protease adaptor protein ClpS [Acaryochloris marina MBIC11017] gi|158308943|gb|ABW30560.1| ATP-dependent Clp protease adaptor protein ClpS [Acaryochloris marina MBIC11017] Length = 93 Score = 40.0 bits (92), Expect = 0.11, Method: Compositional matrix adjust. Identities = 27/69 (39%), Positives = 36/69 (52%), Gaps = 2/69 (2%) Query: 47 EVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVL-QNFFYKDHETAKCIMLKVHHQGIGEC 105 E R +S+ PK YRVLL ND++ ME V+ VL Q A +M++ H GI Sbjct: 7 EKRSTSRKLAPK-YRVLLHNDDFNSMEHVVQVLIQTVPNLTQPQAVSVMMEAHTNGIALV 65 Query: 106 GVYAYEIAE 114 A+E AE Sbjct: 66 ITCAFEHAE 74 >gi|299115355|emb|CBN74180.1| ATP-dependent Clp protease adaptor protein ClpS [Ectocarpus siliculosus] Length = 152 Score = 39.7 bits (91), Expect = 0.12, Method: Compositional matrix adjust. Identities = 22/68 (32%), Positives = 34/68 (50%) Query: 47 EVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECG 106 EV F + +R Y+VLL NDN E+V L TA IM + + G+ + G Sbjct: 66 EVSFETSIRPEDKYKVLLFNDNGNTREYVSRSLVQVVGLSEATAFHIMQQANDNGMAQVG 125 Query: 107 VYAYEIAE 114 ++ E+A+ Sbjct: 126 IWHQEMAD 133 >gi|284929541|ref|YP_003422063.1| hypothetical protein UCYN_10070 [cyanobacterium UCYN-A] gi|284809985|gb|ADB95682.1| uncharacterized conserved protein [cyanobacterium UCYN-A] Length = 97 Score = 39.7 bits (91), Expect = 0.13, Method: Compositional matrix adjust. Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 2/65 (3%) Query: 51 SSKVRVPKLYRVLLVNDNYTPMEFVIHVL-QNFFYKDHETAKCIMLKVHHQGIGECGVYA 109 ++K VP+ Y+VLL ND++ PM++V+ +L Q A IM++ H G A Sbjct: 15 TTKKPVPR-YKVLLHNDDFNPMDYVVQILMQTISGMTRPQAAEIMMEAHISGTALVITCA 73 Query: 110 YEIAE 114 +E AE Sbjct: 74 FEPAE 78 >gi|260434316|ref|ZP_05788286.1| ATP-dependent Clp protease adaptor protein ClpS [Synechococcus sp. WH 8109] gi|260412190|gb|EEX05486.1| ATP-dependent Clp protease adaptor protein ClpS [Synechococcus sp. WH 8109] Length = 123 Score = 39.7 bits (91), Expect = 0.14, Method: Compositional matrix adjust. Identities = 30/93 (32%), Positives = 42/93 (45%), Gaps = 6/93 (6%) Query: 23 SFIFMADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNF 82 S + DS K G A + VR R P+ Y+VLL ND ME+V+ LQ Sbjct: 17 SMVMAVDSPSQKPGGAAVLDKAPERVRK----RSPR-YKVLLHNDPVNSMEYVVATLQQV 71 Query: 83 FYK-DHETAKCIMLKVHHQGIGECGVYAYEIAE 114 + + +ML+ H+ G+G V E AE Sbjct: 72 VPQLSEQDCMAVMLEAHNTGVGLVIVCDIEPAE 104 >gi|114214762|emb|CAK51544.1| ATP-dependent Clp protease adaptor protein ClpS [Celosia cristata] Length = 134 Score = 38.9 bits (89), Expect = 0.22, Method: Compositional matrix adjust. Identities = 21/60 (35%), Positives = 29/60 (48%) Query: 58 KLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKV 117 + + VL+ ND M +V+ V Q F E A +ML VHH+G E AE+ V Sbjct: 59 RPWIVLVWNDPINLMSYVVFVFQKLFGYSREKATSLMLDVHHKGRAVVSSGTREKAELDV 118 >gi|284052626|ref|ZP_06382836.1| ATP-dependent Clp protease adaptor protein ClpS [Arthrospira platensis str. Paraca] Length = 93 Score = 38.9 bits (89), Expect = 0.24, Method: Compositional matrix adjust. Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 1/67 (1%) Query: 49 RFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYK-DHETAKCIMLKVHHQGIGECGV 107 + S+ ++ YRVLL ND++ PME+V+ VL + A IM++ H G+ Sbjct: 8 KTSTNRKLAPRYRVLLHNDDHNPMEYVVQVLMSTVPGLTQPQAVSIMMEAHTNGLALVIT 67 Query: 108 YAYEIAE 114 A E AE Sbjct: 68 CALEHAE 74 >gi|313142600|ref|ZP_07804793.1| ERD1 protein [Helicobacter canadensis MIT 98-5491] gi|313131631|gb|EFR49248.1| ERD1 protein [Helicobacter canadensis MIT 98-5491] Length = 35 Score = 38.9 bits (89), Expect = 0.24, Method: Composition-based stats. Identities = 15/33 (45%), Positives = 24/33 (72%) Query: 105 CGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 CG+Y Y+IAE K QV +++ Q+PL+ I+E+ Sbjct: 2 CGIYPYDIAETKAMQVRKMAKEKQFPLRAILEK 34 >gi|291571937|dbj|BAI94209.1| ATP-dependent Clp protease adaptor protein ClpS [Arthrospira platensis NIES-39] Length = 117 Score = 38.5 bits (88), Expect = 0.27, Method: Compositional matrix adjust. Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 1/77 (1%) Query: 49 RFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYK-DHETAKCIMLKVHHQGIGECGV 107 + S+ ++ YRVLL ND++ PME+V+ VL + A IM++ H G+ Sbjct: 32 KTSTNRKLAPRYRVLLHNDDHNPMEYVVQVLMSTVPGLTQPQAVSIMMEAHTNGLALVIT 91 Query: 108 YAYEIAEMKVNQVMNYS 124 A E AE + N+ Sbjct: 92 CALEHAEFYCETLKNHG 108 >gi|269926486|ref|YP_003323109.1| ATP-dependent Clp protease adaptor protein ClpS [Thermobaculum terrenum ATCC BAA-798] gi|269790146|gb|ACZ42287.1| ATP-dependent Clp protease adaptor protein ClpS [Thermobaculum terrenum ATCC BAA-798] Length = 101 Score = 38.5 bits (88), Expect = 0.29, Method: Compositional matrix adjust. Identities = 19/65 (29%), Positives = 35/65 (53%) Query: 60 YRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQ 119 ++V+L ND+ M++V+ VL E A +ML+ HH G A E AE+ ++ Sbjct: 30 WKVILWNDDVHSMDYVVLVLMRCLGMSLEKATQVMLEAHHNGQSVAWAGAKETAELYQDR 89 Query: 120 VMNYS 124 ++++ Sbjct: 90 LLSFG 94 >gi|116075699|ref|ZP_01472958.1| ATP-dependent Clp protease adaptor protein ClpS [Synechococcus sp. RS9916] gi|116067014|gb|EAU72769.1| ATP-dependent Clp protease adaptor protein ClpS [Synechococcus sp. RS9916] Length = 104 Score = 38.5 bits (88), Expect = 0.30, Method: Compositional matrix adjust. Identities = 23/61 (37%), Positives = 33/61 (54%), Gaps = 2/61 (3%) Query: 55 RVPKLYRVLLVNDNYTPMEFVIHVLQNFFYK-DHETAKCIMLKVHHQGIGECGVYAYEIA 113 R P+ Y+VLL ND ME+V+ LQ + + A +ML+ H+ G+G V E A Sbjct: 26 RSPR-YKVLLHNDPVNSMEYVVSTLQQVVPQLSEQDAMAVMLEAHNSGVGLVIVCDLEPA 84 Query: 114 E 114 E Sbjct: 85 E 85 >gi|75907498|ref|YP_321794.1| ATP-dependent Clp protease adaptor protein ClpS [Anabaena variabilis ATCC 29413] gi|75701223|gb|ABA20899.1| ATP-dependent Clp protease adaptor protein ClpS [Anabaena variabilis ATCC 29413] Length = 93 Score = 38.5 bits (88), Expect = 0.34, Method: Compositional matrix adjust. Identities = 26/69 (37%), Positives = 35/69 (50%), Gaps = 2/69 (2%) Query: 47 EVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYK-DHETAKCIMLKVHHQGIGEC 105 E R +S+ P+ YRVLL ND+Y ME+V+ VL A IM++ H G+ Sbjct: 7 EKRSTSRKLAPR-YRVLLHNDDYNSMEYVVQVLITTVPSLTQPQAVSIMMEAHTNGLALV 65 Query: 106 GVYAYEIAE 114 A E AE Sbjct: 66 ITCAQEHAE 74 >gi|282899028|ref|ZP_06307010.1| ATP-dependent Clp protease adaptor protein ClpS [Cylindrospermopsis raciborskii CS-505] gi|281196168|gb|EFA71083.1| ATP-dependent Clp protease adaptor protein ClpS [Cylindrospermopsis raciborskii CS-505] Length = 93 Score = 38.5 bits (88), Expect = 0.34, Method: Compositional matrix adjust. Identities = 25/76 (32%), Positives = 37/76 (48%), Gaps = 1/76 (1%) Query: 49 RFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYK-DHETAKCIMLKVHHQGIGECGV 107 + S+ ++ YRVLL ND+Y ME+V+ VL + A IM++ H G+ Sbjct: 8 KPSTTRKLAPRYRVLLHNDDYNSMEYVVQVLLSTIPSLTQPQAVSIMMEAHSHGLALVIS 67 Query: 108 YAYEIAEMKVNQVMNY 123 A E AE + NY Sbjct: 68 CALEHAEFYCESLNNY 83 >gi|113954242|ref|YP_729603.1| ATP-dependent Clp protease adaptor protein ClpS [Synechococcus sp. CC9311] gi|113881593|gb|ABI46551.1| ATP-dependent Clp protease adaptor protein ClpS [Synechococcus sp. CC9311] Length = 103 Score = 38.1 bits (87), Expect = 0.43, Method: Compositional matrix adjust. Identities = 30/89 (33%), Positives = 42/89 (47%), Gaps = 6/89 (6%) Query: 27 MADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYK- 85 M D+ G A + VR +S P+ Y+VLL ND ME+V+ LQ + Sbjct: 1 MVDTPSRSPGGAAVLDKQTERVRKTS----PR-YKVLLHNDPVNSMEYVVVTLQQVVPQL 55 Query: 86 DHETAKCIMLKVHHQGIGECGVYAYEIAE 114 + A +ML+ H+ GIG V E AE Sbjct: 56 SEQDAMAVMLETHNTGIGLVIVCDIEPAE 84 >gi|308177064|ref|YP_003916470.1| ATP-dependent Clp protease adaptor protein ClpS [Arthrobacter arilaitensis Re117] gi|307744527|emb|CBT75499.1| ATP-dependent Clp protease adaptor protein ClpS [Arthrobacter arilaitensis Re117] Length = 94 Score = 37.7 bits (86), Expect = 0.48, Method: Compositional matrix adjust. Identities = 25/80 (31%), Positives = 39/80 (48%), Gaps = 6/80 (7%) Query: 58 KLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKV 117 K +R+++ ND M +V +V +++F E A+ +ML+VHH G + E E V Sbjct: 19 KPWRLIVWNDPVNLMSYVAYVFRSYFGVSPEKAEKLMLQVHHDGFCTVRSGSREAIESDV 78 Query: 118 NQVMNYSRQHQYPLQCIMEQ 137 Q M H + L M Q Sbjct: 79 -QAM-----HGFGLNATMTQ 92 >gi|325002222|ref|ZP_08123334.1| ATP-dependent Clp protease adaptor protein ClpS [Pseudonocardia sp. P1] Length = 107 Score = 37.7 bits (86), Expect = 0.55, Method: Compositional matrix adjust. Identities = 16/42 (38%), Positives = 25/42 (59%) Query: 60 YRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQG 101 ++ ++ ND M +V +VLQ F +TA +ML VHH+G Sbjct: 35 WQAIVWNDPVNLMSYVTYVLQKVFDYPEQTANALMLDVHHKG 76 >gi|298490087|ref|YP_003720264.1| ATP-dependent Clp protease adaptor protein ClpS ['Nostoc azollae' 0708] gi|298232005|gb|ADI63141.1| ATP-dependent Clp protease adaptor protein ClpS ['Nostoc azollae' 0708] Length = 92 Score = 37.4 bits (85), Expect = 0.59, Method: Compositional matrix adjust. Identities = 25/69 (36%), Positives = 36/69 (52%), Gaps = 2/69 (2%) Query: 47 EVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYK-DHETAKCIMLKVHHQGIGEC 105 E R +++ P+ YRVLL ND+Y ME+V+ VL A IM++ H+ G+ Sbjct: 7 EKRSTTRKLAPQ-YRVLLHNDDYNSMEYVVQVLMTSVPSITQPQAVNIMMEAHNSGLALV 65 Query: 106 GVYAYEIAE 114 A E AE Sbjct: 66 ITCAQEHAE 74 >gi|87301880|ref|ZP_01084714.1| hypothetical protein WH5701_01105 [Synechococcus sp. WH 5701] gi|87283448|gb|EAQ75403.1| hypothetical protein WH5701_01105 [Synechococcus sp. WH 5701] Length = 109 Score = 37.4 bits (85), Expect = 0.65, Method: Compositional matrix adjust. Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 2/64 (3%) Query: 53 KVRVPKL-YRVLLVNDNYTPMEFVIHVLQNFFYK-DHETAKCIMLKVHHQGIGECGVYAY 110 +VR P YRVLL ND ME+V+ L+ + A +ML+ H+ G+G V Sbjct: 27 RVRKPSPRYRVLLHNDPVNSMEYVVTTLRQVVPSLSEQDAIAVMLEAHNTGVGLVIVCDL 86 Query: 111 EIAE 114 E AE Sbjct: 87 EPAE 90 >gi|239981994|ref|ZP_04704518.1| ATP-dependent Clp protease adaptor protein ClpS [Streptomyces albus J1074] gi|291453845|ref|ZP_06593235.1| ATP-dependent Clp protease adapter protein clpS [Streptomyces albus J1074] gi|291356794|gb|EFE83696.1| ATP-dependent Clp protease adapter protein clpS [Streptomyces albus J1074] Length = 99 Score = 37.4 bits (85), Expect = 0.69, Method: Compositional matrix adjust. Identities = 34/101 (33%), Positives = 45/101 (44%), Gaps = 9/101 (8%) Query: 38 AEFDNCLDSEVRFSSKVRVPKLYRVLLV-NDNYTPMEFVIHVLQNFFYKDHETAKCIMLK 96 AE + +E F+ V P L V LV ND M +V +V Q +F E A +ML Sbjct: 4 AETEQPAAAEETFA--VPEPDLPWVTLVHNDPVNLMSYVAYVFQAYFGYSKEKANKLMLD 61 Query: 97 VHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 VHH+G + E E V Q M H Y L ++Q Sbjct: 62 VHHKGRAVVSSGSREEMERDV-QAM-----HGYGLWATLQQ 96 >gi|182414611|ref|YP_001819677.1| ATP-dependent Clp protease adaptor protein ClpS [Opitutus terrae PB90-1] gi|177841825|gb|ACB76077.1| ATP-dependent Clp protease adaptor protein ClpS [Opitutus terrae PB90-1] Length = 107 Score = 37.4 bits (85), Expect = 0.69, Method: Compositional matrix adjust. Identities = 22/91 (24%), Positives = 43/91 (47%), Gaps = 8/91 (8%) Query: 45 DSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIG- 103 E + ++ + + ++RV+++ND M +V+ V + F D TA+ ML+VH QG Sbjct: 17 SPESQGATALALEGIWRVVVLNDPVNLMSYVVMVFKKVFGFDDATARRHMLEVHEQGRSI 76 Query: 104 -------ECGVYAYEIAEMKVNQVMNYSRQH 127 + YA+ + + + V+ H Sbjct: 77 VWSGLREKAEAYAFTLQQWHLTAVLEPDETH 107 >gi|86608169|ref|YP_476931.1| ATP-dependent Clp protease adaptor protein ClpS [Synechococcus sp. JA-2-3B'a(2-13)] gi|86556711|gb|ABD01668.1| ATP-dependent Clp protease adaptor protein ClpS [Synechococcus sp. JA-2-3B'a(2-13)] Length = 93 Score = 37.4 bits (85), Expect = 0.70, Method: Compositional matrix adjust. Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 5/71 (7%) Query: 58 KLYRVLLVNDNYTPMEFVIHVLQNFFYKDHET-AKCIMLKVHHQGIGECGVYAYEIAEMK 116 +YRVLL ND+ ME+V+ VL A IML+ HH G+ V E AE Sbjct: 17 PMYRVLLHNDDVNTMEYVVQVLVKVIPAMMPPQATEIMLEAHHNGVAVVIVVPREHAEFY 76 Query: 117 VNQVMNYSRQH 127 Q+ RQH Sbjct: 77 CEQL----RQH 83 >gi|294460817|gb|ADE75982.1| unknown [Picea sitchensis] Length = 158 Score = 37.4 bits (85), Expect = 0.73, Method: Compositional matrix adjust. Identities = 26/66 (39%), Positives = 34/66 (51%), Gaps = 9/66 (13%) Query: 38 AEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYK-DHETAKCIMLK 96 +EFD +R S K P YRVLL NDNY E+V+ VL +TA IM + Sbjct: 67 SEFD------LRKSRKTSPP--YRVLLHNDNYNKREYVVQVLMKVIPGMTLDTAVNIMQE 118 Query: 97 VHHQGI 102 H+ G+ Sbjct: 119 AHYNGL 124 >gi|170078877|ref|YP_001735515.1| ATP-dependent Clp protease adaptor protein ClpS [Synechococcus sp. PCC 7002] gi|169886546|gb|ACB00260.1| ATP-dependent Clp protease adaptor protein [Synechococcus sp. PCC 7002] Length = 95 Score = 37.0 bits (84), Expect = 0.80, Method: Compositional matrix adjust. Identities = 23/59 (38%), Positives = 30/59 (50%), Gaps = 2/59 (3%) Query: 47 EVRFSSKVRVPKL-YRVLLVNDNYTPMEFVIHVL-QNFFYKDHETAKCIMLKVHHQGIG 103 E R +S +R P YRVLL ND++ ME V+ L Q A IM++ H GI Sbjct: 7 EQRSTSTIRKPAPRYRVLLHNDDFNSMEHVVQTLMQTVAGLTQPQAVSIMMEAHTNGIA 65 >gi|284989906|ref|YP_003408460.1| ATP-dependent Clp protease adaptor protein ClpS [Geodermatophilus obscurus DSM 43160] gi|284063151|gb|ADB74089.1| ATP-dependent Clp protease adaptor protein ClpS [Geodermatophilus obscurus DSM 43160] Length = 98 Score = 37.0 bits (84), Expect = 0.87, Method: Compositional matrix adjust. Identities = 16/44 (36%), Positives = 25/44 (56%) Query: 58 KLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQG 101 + + ++ ND M +V +VLQ F D TA +ML+VH +G Sbjct: 23 RPWVTIVWNDPVNLMTYVTYVLQELFGYDEPTATTLMLQVHEEG 66 >gi|32477341|ref|NP_870335.1| hypothetical protein RB12137 [Rhodopirellula baltica SH 1] gi|32447892|emb|CAD77410.1| conserved hypothetical protein [Rhodopirellula baltica SH 1] gi|327537948|gb|EGF24645.1| ATP-dependent Clp protease adaptor protein ClpS [Rhodopirellula baltica WH47] Length = 116 Score = 37.0 bits (84), Expect = 0.96, Method: Compositional matrix adjust. Identities = 22/93 (23%), Positives = 41/93 (44%) Query: 36 GIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIML 95 +AE D + E R K + Y V+L +D ++VI +++ F E + Sbjct: 7 AVAEPDVVTEEEQRSDRKPKRQPPYHVILWDDTDHSYDYVISMMKRLFRMPIEKGYQVAK 66 Query: 96 KVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQ 128 +V G C E+AE+K +Q+ + + + Sbjct: 67 EVDKSGRAICMTTTLELAELKRDQIHAFGKDER 99 >gi|148243279|ref|YP_001228436.1| ATP-dependent Clp protease adaptor protein ClpS [Synechococcus sp. RCC307] gi|147851589|emb|CAK29083.1| ATP-dependent Clp protease adaptor protein ClpS [Synechococcus sp. RCC307] Length = 107 Score = 36.6 bits (83), Expect = 1.0, Method: Compositional matrix adjust. Identities = 25/68 (36%), Positives = 33/68 (48%), Gaps = 2/68 (2%) Query: 49 RFSSKVRVPKL-YRVLLVNDNYTPMEFVIHVLQNFFYK-DHETAKCIMLKVHHQGIGECG 106 R VR P YRVLL ND ME+V+ L+ + A +ML+ H+ G+G Sbjct: 21 RQPETVRKPSPRYRVLLHNDPVNSMEYVVTSLREVVPSLSEQDAMAVMLEAHNSGVGLVI 80 Query: 107 VYAYEIAE 114 V E AE Sbjct: 81 VCDIEPAE 88 >gi|225455872|ref|XP_002274839.1| PREDICTED: hypothetical protein [Vitis vinifera] gi|297734178|emb|CBI15425.3| unnamed protein product [Vitis vinifera] Length = 157 Score = 36.6 bits (83), Expect = 1.1, Method: Compositional matrix adjust. Identities = 26/66 (39%), Positives = 34/66 (51%), Gaps = 9/66 (13%) Query: 38 AEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYK-DHETAKCIMLK 96 +EFD +R S K+ P YRVLL NDNY E+V+ VL + A IM + Sbjct: 66 SEFD------LRKSRKMSPP--YRVLLHNDNYNKREYVVQVLMKVIPGMTLDNAVNIMQE 117 Query: 97 VHHQGI 102 HH G+ Sbjct: 118 AHHNGM 123 >gi|78211862|ref|YP_380641.1| ATP-dependent Clp protease adaptor protein ClpS [Synechococcus sp. CC9605] gi|78196321|gb|ABB34086.1| conserved hypothetical protein [Synechococcus sp. CC9605] Length = 106 Score = 36.6 bits (83), Expect = 1.1, Method: Compositional matrix adjust. Identities = 28/92 (30%), Positives = 42/92 (45%), Gaps = 6/92 (6%) Query: 24 FIFMADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFF 83 + +S K G A + +VR R P+ Y+VLL ND ME+V+ LQ Sbjct: 1 MVMAVESPSQKPGGAAVLDKAPEKVRK----RSPR-YKVLLHNDPVNSMEYVVATLQQVV 55 Query: 84 YK-DHETAKCIMLKVHHQGIGECGVYAYEIAE 114 + + +ML+ H+ G+G V E AE Sbjct: 56 PQLSEQDCMAVMLEAHNTGVGLVIVCDIEPAE 87 >gi|147805878|emb|CAN78258.1| hypothetical protein VITISV_026645 [Vitis vinifera] Length = 135 Score = 36.6 bits (83), Expect = 1.2, Method: Compositional matrix adjust. Identities = 26/66 (39%), Positives = 34/66 (51%), Gaps = 9/66 (13%) Query: 38 AEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYK-DHETAKCIMLK 96 +EFD +R S K+ P YRVLL NDNY E+V+ VL + A IM + Sbjct: 44 SEFD------LRKSRKMSPP--YRVLLHNDNYNKREYVVQVLMKVIPGMTLDNAVNIMQE 95 Query: 97 VHHQGI 102 HH G+ Sbjct: 96 AHHNGM 101 >gi|282897015|ref|ZP_06305017.1| ATP-dependent Clp protease adaptor protein ClpS [Raphidiopsis brookii D9] gi|281197667|gb|EFA72561.1| ATP-dependent Clp protease adaptor protein ClpS [Raphidiopsis brookii D9] Length = 93 Score = 36.6 bits (83), Expect = 1.2, Method: Compositional matrix adjust. Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 1/67 (1%) Query: 49 RFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYK-DHETAKCIMLKVHHQGIGECGV 107 + S+ ++ YRVLL ND+Y ME+V+ VL + A IM++ H G+ Sbjct: 8 KPSTTRKLAPRYRVLLHNDDYNSMEYVVQVLLSTIPSLTQPQAVTIMMEAHSNGLALVIS 67 Query: 108 YAYEIAE 114 A E AE Sbjct: 68 CALEHAE 74 >gi|126657545|ref|ZP_01728701.1| ATP-dependent Clp protease adaptor protein ClpS [Cyanothece sp. CCY0110] gi|172037153|ref|YP_001803654.1| ATP-dependent Clp protease adaptor protein ClpS [Cyanothece sp. ATCC 51142] gi|126621249|gb|EAZ91962.1| ATP-dependent Clp protease adaptor protein ClpS [Cyanothece sp. CCY0110] gi|171698607|gb|ACB51588.1| putative ATP-dependent Clp protease, adaptor protein [Cyanothece sp. ATCC 51142] Length = 97 Score = 36.6 bits (83), Expect = 1.2, Method: Compositional matrix adjust. Identities = 25/66 (37%), Positives = 32/66 (48%), Gaps = 2/66 (3%) Query: 51 SSKVRVPKL-YRVLLVNDNYTPMEFVIHVL-QNFFYKDHETAKCIMLKVHHQGIGECGVY 108 +S VR P YRVLL ND++ ME+V+ L Q A IM++ H G Sbjct: 13 TSTVRKPAPRYRVLLHNDDFNSMEYVVQTLMQTVSGMTQPQAVDIMMEAHTNGTALVITC 72 Query: 109 AYEIAE 114 A E AE Sbjct: 73 ALEPAE 78 >gi|17231817|ref|NP_488365.1| ATP-dependent Clp protease adaptor protein ClpS [Nostoc sp. PCC 7120] gi|17133461|dbj|BAB76024.1| asl4325 [Nostoc sp. PCC 7120] Length = 93 Score = 36.6 bits (83), Expect = 1.2, Method: Compositional matrix adjust. Identities = 25/69 (36%), Positives = 35/69 (50%), Gaps = 2/69 (2%) Query: 47 EVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYK-DHETAKCIMLKVHHQGIGEC 105 E R +S+ P+ YRVLL ND++ ME+V+ VL A IM++ H G+ Sbjct: 7 EKRSTSRKLAPR-YRVLLHNDDHNSMEYVVQVLITTVPSLTQPQAVSIMMEAHTNGLALV 65 Query: 106 GVYAYEIAE 114 A E AE Sbjct: 66 ITCAQEHAE 74 >gi|115610667|ref|XP_780182.2| PREDICTED: similar to ENSANGP00000004936 [Strongylocentrotus purpuratus] gi|115958661|ref|XP_001194023.1| PREDICTED: similar to ENSANGP00000004936 [Strongylocentrotus purpuratus] Length = 694 Score = 36.2 bits (82), Expect = 1.4, Method: Composition-based stats. Identities = 21/66 (31%), Positives = 37/66 (56%), Gaps = 8/66 (12%) Query: 31 RMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETA 90 RMN+ G+ E+D+CL+ E+++S + P + L N N +E + V+ KDH + Sbjct: 560 RMNENGLIEYDSCLEMELQYSGEKGGPSVTETLYRNKN--ALETIFRVMD----KDH--S 611 Query: 91 KCIMLK 96 CI ++ Sbjct: 612 GCISME 617 >gi|302761288|ref|XP_002964066.1| hypothetical protein SELMODRAFT_142341 [Selaginella moellendorffii] gi|302787370|ref|XP_002975455.1| hypothetical protein SELMODRAFT_150531 [Selaginella moellendorffii] gi|300157029|gb|EFJ23656.1| hypothetical protein SELMODRAFT_150531 [Selaginella moellendorffii] gi|300167795|gb|EFJ34399.1| hypothetical protein SELMODRAFT_142341 [Selaginella moellendorffii] Length = 164 Score = 36.2 bits (82), Expect = 1.5, Method: Compositional matrix adjust. Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 1/77 (1%) Query: 45 DSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYK-DHETAKCIMLKVHHQGIG 103 +SE K ++ YRV+L NDN+ E+V+ VL + A IM + HH G+ Sbjct: 71 ESEFDLRKKKKMAPPYRVILHNDNFNRREYVVQVLMKVIPGMTLDNAVNIMQEAHHNGLS 130 Query: 104 ECGVYAYEIAEMKVNQV 120 V + E AE Q+ Sbjct: 131 VVIVCSQEDAEEHCTQL 147 >gi|295836847|ref|ZP_06823780.1| ATP-dependent Clp protease adaptor protein ClpS [Streptomyces sp. SPB74] gi|197699546|gb|EDY46479.1| ATP-dependent Clp protease adaptor protein ClpS [Streptomyces sp. SPB74] Length = 102 Score = 35.8 bits (81), Expect = 1.8, Method: Compositional matrix adjust. Identities = 31/94 (32%), Positives = 44/94 (46%), Gaps = 8/94 (8%) Query: 45 DSEVRFSSKVRVPKLYRVLLV-NDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIG 103 D+E SS V P L + LV ND M +V +V Q++F + A +ML VH++G Sbjct: 13 DAEAE-SSVVTEPDLLWITLVHNDPVNLMSYVTYVFQSYFGYSKDKATKLMLDVHNKGRA 71 Query: 104 ECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 + E E V Q M H Y L ++Q Sbjct: 72 VVSSGSREEMERDV-QAM-----HGYGLWATLQQ 99 >gi|124024066|ref|YP_001018373.1| ATP-dependent Clp protease adaptor protein ClpS [Prochlorococcus marinus str. MIT 9303] gi|123964352|gb|ABM79108.1| Uncharacterized conserved protein [Prochlorococcus marinus str. MIT 9303] Length = 120 Score = 35.8 bits (81), Expect = 1.8, Method: Compositional matrix adjust. Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 1/56 (1%) Query: 60 YRVLLVNDNYTPMEFVIHVLQNFFYK-DHETAKCIMLKVHHQGIGECGVYAYEIAE 114 Y+VLL ND ME+V+ LQ + + A +ML+ H+ G+G V E AE Sbjct: 46 YKVLLHNDPVNSMEYVVVTLQQVVPQLSEQDAMAVMLEAHNTGVGLVIVCDLEPAE 101 >gi|297737852|emb|CBI27053.3| unnamed protein product [Vitis vinifera] Length = 127 Score = 35.8 bits (81), Expect = 2.0, Method: Compositional matrix adjust. Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 12/59 (20%) Query: 38 AEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLK 96 +EFD +R S K+ P YRV+L NDNY E+V+ VL +DH C+ L+ Sbjct: 66 SEFD------LRKSRKIAPP--YRVILHNDNYNKREYVVQVLMKADAEDH----CMQLR 112 >gi|33864059|ref|NP_895619.1| ATP-dependent Clp protease adaptor protein ClpS [Prochlorococcus marinus str. MIT 9313] gi|33635643|emb|CAE21967.1| conserved hypothetical protein [Prochlorococcus marinus str. MIT 9313] Length = 130 Score = 35.8 bits (81), Expect = 2.0, Method: Compositional matrix adjust. Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 1/56 (1%) Query: 60 YRVLLVNDNYTPMEFVIHVLQNFFYK-DHETAKCIMLKVHHQGIGECGVYAYEIAE 114 Y+VLL ND ME+V+ LQ + + A +ML+ H+ G+G V E AE Sbjct: 56 YKVLLHNDPVNSMEYVVVTLQQVVPQLSEQDAMAVMLEAHNTGVGLVIVCDLEPAE 111 >gi|162449014|ref|YP_001611381.1| hypothetical protein sce0744 [Sorangium cellulosum 'So ce 56'] gi|161159596|emb|CAN90901.1| hypothetical protein predicted by Glimmer/Critica [Sorangium cellulosum 'So ce 56'] Length = 285 Score = 35.8 bits (81), Expect = 2.1, Method: Compositional matrix adjust. Identities = 22/78 (28%), Positives = 35/78 (44%) Query: 58 KLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKV 117 +L V+ ND+ T ME V +L + F D A ML VH G G Y + A + Sbjct: 176 ELVEVVFWNDDVTKMEAVQRLLVDCFGMDEVEATHFMLTVHFAGSAAAGPYRPDTAAALL 235 Query: 118 NQVMNYSRQHQYPLQCIM 135 + +R+ P++ + Sbjct: 236 ARATQVARERGMPIRITL 253 >gi|189218668|ref|YP_001939309.1| ATP-dependent Clp protease adaptor protein clpS [Methylacidiphilum infernorum V4] gi|189185526|gb|ACD82711.1| ATP-dependent Clp protease adaptor protein clpS [Methylacidiphilum infernorum V4] Length = 108 Score = 35.8 bits (81), Expect = 2.2, Method: Compositional matrix adjust. Identities = 23/80 (28%), Positives = 39/80 (48%), Gaps = 6/80 (7%) Query: 58 KLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKV 117 +L+ V++ ND M +V++V Q + A ML+VH++G E AE+ V Sbjct: 34 QLWGVIVWNDPINLMSYVVYVFQRVLKMSKQDATRHMLEVHNKGKSMVAKETKEKAELLV 93 Query: 118 NQVMNYSRQHQYPLQCIMEQ 137 +Q+ + LQ ME+ Sbjct: 94 HQLQGFG------LQATMEK 107 >gi|88807954|ref|ZP_01123465.1| ATP-dependent Clp protease adaptor protein ClpS [Synechococcus sp. WH 7805] gi|88787993|gb|EAR19149.1| ATP-dependent Clp protease adaptor protein ClpS [Synechococcus sp. WH 7805] Length = 104 Score = 35.8 bits (81), Expect = 2.2, Method: Compositional matrix adjust. Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 1/56 (1%) Query: 60 YRVLLVNDNYTPMEFVIHVLQNFFYK-DHETAKCIMLKVHHQGIGECGVYAYEIAE 114 Y+VLL ND ME+V+ L+ + + A +ML+ H+ G+G V E AE Sbjct: 30 YKVLLHNDPVNSMEYVVSTLRQVVPQLSEQDAMAVMLEAHNTGVGLVIVCDLEPAE 85 >gi|148238705|ref|YP_001224092.1| ATP-dependent Clp protease adaptor protein ClpS [Synechococcus sp. WH 7803] gi|147847244|emb|CAK22795.1| ATP-dependent Clp protease adaptor protein ClpS [Synechococcus sp. WH 7803] Length = 106 Score = 35.4 bits (80), Expect = 2.4, Method: Compositional matrix adjust. Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 1/56 (1%) Query: 60 YRVLLVNDNYTPMEFVIHVLQNFFYK-DHETAKCIMLKVHHQGIGECGVYAYEIAE 114 Y+VLL ND ME+V+ L+ + + A +ML+ H+ G+G V E AE Sbjct: 32 YKVLLHNDPVNSMEYVVSTLRQVVPQLSEQDAMAVMLEAHNTGVGLVIVCDLEPAE 87 >gi|218246012|ref|YP_002371383.1| ATP-dependent Clp protease adaptor protein ClpS [Cyanothece sp. PCC 8801] gi|257059062|ref|YP_003136950.1| ATP-dependent Clp protease adaptor protein ClpS [Cyanothece sp. PCC 8802] gi|218166490|gb|ACK65227.1| ATP-dependent Clp protease adaptor protein ClpS [Cyanothece sp. PCC 8801] gi|256589228|gb|ACV00115.1| ATP-dependent Clp protease adaptor protein ClpS [Cyanothece sp. PCC 8802] Length = 97 Score = 35.4 bits (80), Expect = 2.7, Method: Compositional matrix adjust. Identities = 26/75 (34%), Positives = 35/75 (46%), Gaps = 2/75 (2%) Query: 51 SSKVRVPKL-YRVLLVNDNYTPMEFVIHVL-QNFFYKDHETAKCIMLKVHHQGIGECGVY 108 S+ VR P YRVLL ND++ ME+V+ L Q A IM++ H G Sbjct: 13 SATVRKPAPRYRVLLHNDDFNSMEYVVQTLMQTVAGMTQPQAVDIMMEAHTNGTALVITC 72 Query: 109 AYEIAEMKVNQVMNY 123 A E AE + N+ Sbjct: 73 ALEHAEFYCETLKNH 87 >gi|260906183|ref|ZP_05914505.1| ATP-dependent Clp protease adaptor protein ClpS [Brevibacterium linens BL2] Length = 101 Score = 35.0 bits (79), Expect = 3.0, Method: Compositional matrix adjust. Identities = 18/58 (31%), Positives = 28/58 (48%) Query: 44 LDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQG 101 L+ EV K ++ ++ ND M +V +V Q +F E A +ML+VH G Sbjct: 9 LEPEVDIRPVTEQAKPWKTVVFNDPVNLMSYVSYVFQAYFGYSTEKAHSLMLEVHENG 66 >gi|87125032|ref|ZP_01080879.1| hypothetical protein RS9917_03483 [Synechococcus sp. RS9917] gi|86167352|gb|EAQ68612.1| hypothetical protein RS9917_03483 [Synechococcus sp. RS9917] Length = 111 Score = 35.0 bits (79), Expect = 3.3, Method: Compositional matrix adjust. Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 1/56 (1%) Query: 60 YRVLLVNDNYTPMEFVIHVLQNFFYK-DHETAKCIMLKVHHQGIGECGVYAYEIAE 114 Y+VLL ND ME+V+ L+ + + A +ML+ H+ G+G V E AE Sbjct: 37 YKVLLHNDPVNTMEYVVTTLRQVVPQLSEQDAMAVMLEAHNTGVGLVIVCDLEPAE 92 >gi|113474895|ref|YP_720956.1| ATP-dependent Clp protease adaptor protein ClpS [Trichodesmium erythraeum IMS101] gi|110165943|gb|ABG50483.1| ATP-dependent Clp protease adaptor protein ClpS [Trichodesmium erythraeum IMS101] Length = 95 Score = 35.0 bits (79), Expect = 3.6, Method: Compositional matrix adjust. Identities = 21/56 (37%), Positives = 28/56 (50%), Gaps = 1/56 (1%) Query: 60 YRVLLVNDNYTPMEFVIHVLQNFFYK-DHETAKCIMLKVHHQGIGECGVYAYEIAE 114 YRVLL ND++ ME+V+ L A IM++ H GI + A E AE Sbjct: 21 YRVLLHNDDFNSMEYVVQTLMKTVPSLTQPQAVNIMMEAHSNGIALVIICALEPAE 76 >gi|86607127|ref|YP_475890.1| ATP-dependent Clp protease adaptor protein ClpS [Synechococcus sp. JA-3-3Ab] gi|86555669|gb|ABD00627.1| ATP-dependent Clp protease adaptor protein ClpS [Synechococcus sp. JA-3-3Ab] Length = 93 Score = 35.0 bits (79), Expect = 3.8, Method: Compositional matrix adjust. Identities = 26/71 (36%), Positives = 34/71 (47%), Gaps = 5/71 (7%) Query: 58 KLYRVLLVNDNYTPMEFVIHVLQNFFYKD-HETAKCIMLKVHHQGIGECGVYAYEIAEMK 116 +YRVLL ND+ ME+V+ VL A IML+ H+ G+ V E AE Sbjct: 17 PMYRVLLHNDDVNTMEYVVQVLVKVIPSMLPPQATEIMLEAHNNGVAVVIVVPREHAEFY 76 Query: 117 VNQVMNYSRQH 127 Q+ RQH Sbjct: 77 CEQL----RQH 83 >gi|311743607|ref|ZP_07717413.1| ATP-dependent Clp protease adaptor protein ClpS [Aeromicrobium marinum DSM 15272] gi|311312737|gb|EFQ82648.1| ATP-dependent Clp protease adaptor protein ClpS [Aeromicrobium marinum DSM 15272] Length = 101 Score = 34.7 bits (78), Expect = 4.6, Method: Compositional matrix adjust. Identities = 25/91 (27%), Positives = 40/91 (43%), Gaps = 6/91 (6%) Query: 47 EVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECG 106 E V + + ++ ND M +V +V +N+F E A +ML VHH+G Sbjct: 14 EPEVDEAVELEAPWVTIVWNDPVNLMSYVSYVFRNYFGYTDEKATELMLAVHHEGKAVVS 73 Query: 107 VYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 + E E V Q M H+Y L +++ Sbjct: 74 TGSREQMERHV-QAM-----HEYGLWATLQR 98 >gi|225423913|ref|XP_002281884.1| PREDICTED: hypothetical protein [Vitis vinifera] gi|147853628|emb|CAN80233.1| hypothetical protein VITISV_037190 [Vitis vinifera] Length = 157 Score = 34.3 bits (77), Expect = 5.7, Method: Compositional matrix adjust. Identities = 24/66 (36%), Positives = 34/66 (51%), Gaps = 9/66 (13%) Query: 38 AEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYK-DHETAKCIMLK 96 +EFD +R S K+ P YRV+L NDNY E+V+ VL + A IM + Sbjct: 66 SEFD------LRKSRKIAPP--YRVILHNDNYNKREYVVQVLMKVIPGMTLDNAVNIMQE 117 Query: 97 VHHQGI 102 H+ G+ Sbjct: 118 AHYNGL 123 >gi|171910264|ref|ZP_02925734.1| ATP-dependent Clp protease adaptor protein ClpS [Verrucomicrobium spinosum DSM 4136] Length = 98 Score = 34.3 bits (77), Expect = 5.7, Method: Compositional matrix adjust. Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 2/77 (2%) Query: 48 VRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFF-YKDHETAKCIMLKVHHQGIGECG 106 V V + + V++ ND M +V HV++ F Y D E A+ +ML+VH +G + Sbjct: 13 VETDPSVALDSPWHVIIHNDPVNLMSYVAHVIRKIFGYPDKE-AQRLMLQVHQEGRSQVW 71 Query: 107 VYAYEIAEMKVNQVMNY 123 E AE V ++ + Sbjct: 72 TGRREKAEHYVRELHGH 88 >gi|255576515|ref|XP_002529149.1| ATP-dependent Clp protease adaptor protein clpS, putative [Ricinus communis] gi|223531428|gb|EEF33262.1| ATP-dependent Clp protease adaptor protein clpS, putative [Ricinus communis] Length = 120 Score = 33.9 bits (76), Expect = 7.5, Method: Compositional matrix adjust. Identities = 24/66 (36%), Positives = 33/66 (50%), Gaps = 9/66 (13%) Query: 38 AEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYK-DHETAKCIMLK 96 +EFD +R S K P YRV+L NDNY E+V+ VL + A IM + Sbjct: 29 SEFD------LRKSRKTAPP--YRVILHNDNYNKREYVVQVLMKVIPGMTLDNAVNIMQE 80 Query: 97 VHHQGI 102 H+ G+ Sbjct: 81 AHYNGL 86 >gi|224001838|ref|XP_002290591.1| predicted protein [Thalassiosira pseudonana CCMP1335] gi|220974013|gb|EED92343.1| predicted protein [Thalassiosira pseudonana CCMP1335] Length = 147 Score = 33.9 bits (76), Expect = 8.1, Method: Compositional matrix adjust. Identities = 19/56 (33%), Positives = 25/56 (44%) Query: 60 YRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEM 115 + V L ND EFV L D A +M+ H QG+ G Y E+AE+ Sbjct: 73 WLVRLYNDPMNKREFVARCLMEICGLDDGAAYTVMMHAHQQGLSVIGKYHREVAEL 128 >gi|224099343|ref|XP_002311446.1| predicted protein [Populus trichocarpa] gi|118481362|gb|ABK92624.1| unknown [Populus trichocarpa] gi|222851266|gb|EEE88813.1| predicted protein [Populus trichocarpa] Length = 158 Score = 33.5 bits (75), Expect = 9.1, Method: Compositional matrix adjust. Identities = 24/66 (36%), Positives = 34/66 (51%), Gaps = 9/66 (13%) Query: 38 AEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYK-DHETAKCIMLK 96 +EFD +R S K+ P YRV+L NDNY E+V+ VL + A IM + Sbjct: 67 SEFD------LRKSKKMAPP--YRVMLHNDNYNKREYVVQVLMKVIPGMTLDNAVNIMQE 118 Query: 97 VHHQGI 102 H+ G+ Sbjct: 119 AHYNGL 124 Searching..................................................done Results from round 2 >gi|254780164|ref|YP_003064577.1| ATP-dependent Clp protease adaptor protein ClpS [Candidatus Liberibacter asiaticus str. psy62] gi|254039841|gb|ACT56637.1| ATP-dependent Clp protease adaptor protein ClpS [Candidatus Liberibacter asiaticus str. psy62] Length = 138 Score = 225 bits (574), Expect = 2e-57, Method: Composition-based stats. Identities = 138/138 (100%), Positives = 138/138 (100%) Query: 1 MYLFDDGSMYHRVKRDGILALMSFIFMADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLY 60 MYLFDDGSMYHRVKRDGILALMSFIFMADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLY Sbjct: 1 MYLFDDGSMYHRVKRDGILALMSFIFMADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLY 60 Query: 61 RVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQV 120 RVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQV Sbjct: 61 RVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQV 120 Query: 121 MNYSRQHQYPLQCIMEQK 138 MNYSRQHQYPLQCIMEQK Sbjct: 121 MNYSRQHQYPLQCIMEQK 138 >gi|300022147|ref|YP_003754758.1| ATP-dependent Clp protease adaptor protein ClpS [Hyphomicrobium denitrificans ATCC 51888] gi|299523968|gb|ADJ22437.1| ATP-dependent Clp protease adaptor protein ClpS [Hyphomicrobium denitrificans ATCC 51888] Length = 129 Score = 188 bits (478), Expect = 2e-46, Method: Composition-based stats. Identities = 63/124 (50%), Positives = 80/124 (64%), Gaps = 4/124 (3%) Query: 19 LALMSFIFMADSRMNKKGIAEFDNCLDSEV----RFSSKVRVPKLYRVLLVNDNYTPMEF 74 L + + I MA G D DS+ + K + P LY+VLL+ND++TPMEF Sbjct: 6 LPIAALIRMAGKDDPPNGPGRDDRDGDSKTGIVTKTRPKTKKPSLYKVLLLNDDFTPMEF 65 Query: 75 VIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCI 134 V+ VLQ FF K E A IML VHH+G+G CGVY YEIAE KV QVM++SRQH +PLQC Sbjct: 66 VVLVLQRFFNKGQEDATRIMLHVHHKGVGICGVYTYEIAETKVTQVMDFSRQHGHPLQCT 125 Query: 135 MEQK 138 ME++ Sbjct: 126 MEKE 129 >gi|148553784|ref|YP_001261366.1| ATP-dependent Clp protease adaptor protein ClpS [Sphingomonas wittichii RW1] gi|148498974|gb|ABQ67228.1| ATP-dependent Clp protease adaptor protein ClpS [Sphingomonas wittichii RW1] Length = 131 Score = 183 bits (464), Expect = 1e-44, Method: Composition-based stats. Identities = 49/120 (40%), Positives = 78/120 (65%) Query: 18 ILALMSFIFMADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIH 77 I++ +F +K + L R ++ + P Y+VL++ND+YTPMEFV+ Sbjct: 11 IMSHSAFTTAPTGMATRKDGDDNGTGLGLATRTRTRTKKPSPYKVLMLNDDYTPMEFVVL 70 Query: 78 VLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 LQ FF + E A +ML VH +G+G CGV++YE+AE KV+QV++++RQ+Q+PLQC +E+ Sbjct: 71 CLQRFFRMNLEDATRVMLHVHQKGVGVCGVFSYEVAETKVSQVVDFARQNQHPLQCTLEK 130 >gi|330993783|ref|ZP_08317715.1| ATP-dependent Clp protease adapter protein ClpS [Gluconacetobacter sp. SXCC-1] gi|329759051|gb|EGG75563.1| ATP-dependent Clp protease adapter protein ClpS [Gluconacetobacter sp. SXCC-1] Length = 175 Score = 181 bits (459), Expect = 4e-44, Method: Composition-based stats. Identities = 54/131 (41%), Positives = 78/131 (59%), Gaps = 6/131 (4%) Query: 13 VKRDGILALMSFIFMADSRMNKKG------IAEFDNCLDSEVRFSSKVRVPKLYRVLLVN 66 R A ++ + G D +D + + R P +Y+VL++N Sbjct: 44 ASRPAGAAARPLGHGGNTPPRRNGGGQDSPPGNDDGMIDVVIHTRPQTRKPAMYKVLMLN 103 Query: 67 DNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQ 126 D+YTPMEFV+HVL+ FF K+ E A IML VH +G+G CGV+ YE+AE KV QVM+ +RQ Sbjct: 104 DDYTPMEFVVHVLERFFQKNREEATDIMLHVHKRGVGVCGVFTYEVAETKVTQVMDLARQ 163 Query: 127 HQYPLQCIMEQ 137 +Q+PLQC +E+ Sbjct: 164 NQHPLQCTIEK 174 >gi|296533024|ref|ZP_06895672.1| ATP-dependent Clp protease [Roseomonas cervicalis ATCC 49957] gi|296266653|gb|EFH12630.1| ATP-dependent Clp protease [Roseomonas cervicalis ATCC 49957] Length = 120 Score = 180 bits (458), Expect = 5e-44, Method: Composition-based stats. Identities = 55/110 (50%), Positives = 75/110 (68%) Query: 29 DSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHE 88 DS N G V+ + R P +Y+VL++ND+YTPMEFV+HVL+ FF K+ E Sbjct: 11 DSGQNGNGQTGDGAATGVVVKTRPRTRKPAMYKVLMLNDDYTPMEFVVHVLERFFQKNRE 70 Query: 89 TAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 A IML VH +G+G CGVY YE+AE KV QVM+ +RQ+Q+PLQC +E++ Sbjct: 71 EATRIMLHVHRRGVGVCGVYTYEVAETKVTQVMDLARQNQHPLQCTIEKE 120 >gi|94495922|ref|ZP_01302501.1| hypothetical protein SKA58_15107 [Sphingomonas sp. SKA58] gi|94424614|gb|EAT09636.1| hypothetical protein SKA58_15107 [Sphingomonas sp. SKA58] Length = 124 Score = 180 bits (458), Expect = 5e-44, Method: Composition-based stats. Identities = 53/122 (43%), Positives = 83/122 (68%) Query: 16 DGILALMSFIFMADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFV 75 + ++ + MA + +G + R ++ + P LY+VL++ND+YTPMEFV Sbjct: 2 NSLITASWPVNMAGRDQDDQGEGPGGPNVGIATRTRTRTKKPSLYKVLMLNDDYTPMEFV 61 Query: 76 IHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIM 135 +HVLQ+FF D E A +ML VH +G+G CG+++YE+AE KVNQVM+++RQ+Q+PLQC + Sbjct: 62 VHVLQSFFRMDMEEATRVMLHVHQRGVGICGIFSYEVAETKVNQVMDFARQNQHPLQCTL 121 Query: 136 EQ 137 E+ Sbjct: 122 EK 123 >gi|295917937|gb|ADG60244.1| ATP-dependent Clp protease adaptor protein ClpS [uncultured bacterium] Length = 133 Score = 178 bits (453), Expect = 2e-43, Method: Composition-based stats. Identities = 53/123 (43%), Positives = 80/123 (65%), Gaps = 5/123 (4%) Query: 19 LALMSFIFMADSRMNKKGIAEFDNCLDSE----VRFSSKVRVPKLYRVLLVNDNYTPMEF 74 LAL+ + ++D G D + R +K + P Y+VL++ND+YTPMEF Sbjct: 11 LALLP-VRLSDEDEGGSGPGNDDGDGQGQVGLATRTRAKPKKPSQYKVLMLNDDYTPMEF 69 Query: 75 VIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCI 134 V+ VL+ FF D E A +ML VH +G+G CG++ YE+AE KV+QVM+++RQ+Q+PLQC Sbjct: 70 VVMVLKRFFRMDLEQATRVMLHVHQRGVGVCGIFPYEVAETKVSQVMDFARQNQHPLQCT 129 Query: 135 MEQ 137 +E+ Sbjct: 130 LEK 132 >gi|294013244|ref|YP_003546704.1| ATP-dependent Clp protease adaptor protein ClpS [Sphingobium japonicum UT26S] gi|292676574|dbj|BAI98092.1| ATP-dependent Clp protease adaptor protein ClpS [Sphingobium japonicum UT26S] Length = 135 Score = 178 bits (451), Expect = 3e-43, Method: Composition-based stats. Identities = 53/113 (46%), Positives = 79/113 (69%) Query: 25 IFMADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFY 84 + MA + +G + R ++ + P LY+VL++ND+YTPMEFV+HVLQ FF Sbjct: 22 VTMAGRDQDDQGDGSGGPNVGIATRTRARTKKPSLYKVLMLNDDYTPMEFVVHVLQQFFR 81 Query: 85 KDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 D E A +ML VH +G+G CG+++YE+AE KVNQVM+++RQ+Q+PLQC +E+ Sbjct: 82 MDMEEATRVMLHVHQRGVGVCGIFSYEVAETKVNQVMDFARQNQHPLQCTLEK 134 >gi|114328313|ref|YP_745470.1| ATP-dependent Clp protease adaptor protein ClpS [Granulibacter bethesdensis CGDNIH1] gi|114316487|gb|ABI62547.1| ATP-dependent Clp protease adaptor protein ClpS [Granulibacter bethesdensis CGDNIH1] Length = 178 Score = 177 bits (450), Expect = 4e-43, Method: Composition-based stats. Identities = 56/129 (43%), Positives = 77/129 (59%), Gaps = 3/129 (2%) Query: 13 VKRDGILALMSFIFMAD---SRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNY 69 KR + M D S + +G A + R P LY+VL++ND+Y Sbjct: 50 PKRRMVRLHDGKNTMIDIHGSDEHGQGHAGDGTSTGLIAKTRPATRKPSLYKVLMLNDDY 109 Query: 70 TPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQY 129 TPMEFV+HVL+ FF K E A IML VH +G+G CGV+ YE+AE KV QVM+ +R +Q+ Sbjct: 110 TPMEFVVHVLERFFQKTREEATQIMLHVHRRGVGVCGVFTYEVAETKVTQVMDLARHNQH 169 Query: 130 PLQCIMEQK 138 PLQC +E++ Sbjct: 170 PLQCTIEKE 178 >gi|46201030|ref|ZP_00055925.2| COG2127: Uncharacterized conserved protein [Magnetospirillum magnetotacticum MS-1] Length = 110 Score = 177 bits (449), Expect = 5e-43, Method: Composition-based stats. Identities = 52/112 (46%), Positives = 80/112 (71%), Gaps = 2/112 (1%) Query: 27 MADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKD 86 M+++ +K+G + + ++ K + P +Y+VL++ND+YTPMEFV+HVL+ FF K Sbjct: 1 MSENGNDKQGGDDGQTGV--VIKTRPKTKKPSMYKVLMLNDDYTPMEFVVHVLERFFNKS 58 Query: 87 HETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 E A +ML VH +G+G CGVY YE+AE KV QVM+ +RQ+Q+PLQC +E++ Sbjct: 59 REDATRVMLNVHTRGVGICGVYTYEVAETKVTQVMDLARQNQHPLQCTIEKE 110 >gi|144898735|emb|CAM75599.1| ATP-dependent Clp protease adaptor protein clpS [Magnetospirillum gryphiswaldense MSR-1] Length = 146 Score = 177 bits (449), Expect = 5e-43, Method: Composition-based stats. Identities = 60/137 (43%), Positives = 89/137 (64%), Gaps = 5/137 (3%) Query: 1 MYLFDDGSMYHRVKRDGILALMSFIFMADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLY 60 ++ F D + Y R R + ++ M+D +K+ DN ++ K + P +Y Sbjct: 14 LFSFCDFAQYDR--RVPMGTNLANETMSDHNDDKQ---NGDNQTGVVIKTRPKTKKPSMY 68 Query: 61 RVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQV 120 +VL++ND+YTPMEFV+HVL++FF K E A IML VH +G+G CGVY YE+AE KV QV Sbjct: 69 KVLMLNDDYTPMEFVVHVLEHFFNKSREDATRIMLHVHTRGVGICGVYTYEVAETKVTQV 128 Query: 121 MNYSRQHQYPLQCIMEQ 137 M+ +RQ+Q+PLQC +E+ Sbjct: 129 MDLARQNQHPLQCTIEK 145 >gi|85709342|ref|ZP_01040407.1| ATP-dependent Clp protease adaptor protein ClpS [Erythrobacter sp. NAP1] gi|85688052|gb|EAQ28056.1| ATP-dependent Clp protease adaptor protein ClpS [Erythrobacter sp. NAP1] Length = 140 Score = 176 bits (448), Expect = 6e-43, Method: Composition-based stats. Identities = 53/121 (43%), Positives = 81/121 (66%), Gaps = 3/121 (2%) Query: 20 ALMSFIFMADSRMNKKGIAEFDNC---LDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVI 76 A + + +AD K G ++ D + + +K + P Y+VL++ND+YTPMEFV+ Sbjct: 19 AAFAAVRLADDDEKKDGGSDTDEGDGQVVIATKTRTKPKKPSQYKVLMLNDDYTPMEFVV 78 Query: 77 HVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIME 136 VL+ FF D E A +ML VH +G+G CG++ YE+AE KVNQVM+++RQ+Q+PLQC +E Sbjct: 79 MVLKRFFGMDLEAATRVMLHVHQKGVGVCGIFPYEVAETKVNQVMDFARQNQHPLQCTLE 138 Query: 137 Q 137 + Sbjct: 139 K 139 >gi|182678642|ref|YP_001832788.1| ATP-dependent Clp protease adaptor protein ClpS [Beijerinckia indica subsp. indica ATCC 9039] gi|182634525|gb|ACB95299.1| ATP-dependent Clp protease adaptor protein ClpS [Beijerinckia indica subsp. indica ATCC 9039] Length = 137 Score = 176 bits (448), Expect = 6e-43, Method: Composition-based stats. Identities = 58/131 (44%), Positives = 84/131 (64%) Query: 8 SMYHRVKRDGILALMSFIFMADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVND 67 S R LA+ + + + + + + + + R ++ R P +YRVLL+ND Sbjct: 7 SAIRRPPLLARLAVFAGLRIRGAGKDPQKGGDGGSGTAVITRPKTQTRRPSMYRVLLLND 66 Query: 68 NYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQH 127 +YTPMEFV+ VL+ +F K E A IML VH G+GECG++ YE+AE KV QVM+Y+R+H Sbjct: 67 DYTPMEFVVSVLKKYFNKGPEEATRIMLHVHQHGVGECGIFTYEVAETKVTQVMDYARKH 126 Query: 128 QYPLQCIMEQK 138 Q+PLQCIME+K Sbjct: 127 QHPLQCIMEKK 137 >gi|170747222|ref|YP_001753482.1| ATP-dependent Clp protease adaptor protein ClpS [Methylobacterium radiotolerans JCM 2831] gi|170653744|gb|ACB22799.1| ATP-dependent Clp protease adaptor protein ClpS [Methylobacterium radiotolerans JCM 2831] Length = 128 Score = 176 bits (448), Expect = 7e-43, Method: Composition-based stats. Identities = 62/128 (48%), Positives = 81/128 (63%), Gaps = 10/128 (7%) Query: 11 HRVKRDGILALMSFIFMADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYT 70 HR R + A S D R N I R + + P LYRVLL+ND+YT Sbjct: 11 HRPARIAVTASGSRAPGGDDRSNTAII----------TRTKPRTKRPSLYRVLLLNDDYT 60 Query: 71 PMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYP 130 PMEFV+ V++ FF K HE A IM+ VH G+GECGV+ YE+AE KV QVM+++R+HQ+P Sbjct: 61 PMEFVVLVVERFFNKSHEDAYHIMMHVHQNGVGECGVFTYEVAETKVTQVMDFARKHQHP 120 Query: 131 LQCIMEQK 138 LQC+ME+K Sbjct: 121 LQCVMEKK 128 >gi|315122668|ref|YP_004063157.1| ATP-dependent Clp protease adaptor protein ClpS [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313496070|gb|ADR52669.1| ATP-dependent Clp protease adaptor protein ClpS [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 120 Score = 176 bits (447), Expect = 9e-43, Method: Composition-based stats. Identities = 88/120 (73%), Positives = 107/120 (89%) Query: 19 LALMSFIFMADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHV 78 + +SF+FMA + MN+KG+A D+C++++ SSKVR P+LYRVLLVND+YTPMEFVIHV Sbjct: 1 MVAISFVFMAKNHMNEKGVARTDSCINTKEEISSKVRAPRLYRVLLVNDDYTPMEFVIHV 60 Query: 79 LQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 LQ FF+KDHE++K IMLK+HHQGIGECGVYAYEIAEMKVNQVMNYSRQ+Q+PLQCIME K Sbjct: 61 LQKFFHKDHESSKSIMLKIHHQGIGECGVYAYEIAEMKVNQVMNYSRQNQHPLQCIMEHK 120 >gi|307294031|ref|ZP_07573875.1| ATP-dependent Clp protease adaptor protein ClpS [Sphingobium chlorophenolicum L-1] gi|306880182|gb|EFN11399.1| ATP-dependent Clp protease adaptor protein ClpS [Sphingobium chlorophenolicum L-1] Length = 112 Score = 176 bits (447), Expect = 9e-43, Method: Composition-based stats. Identities = 53/111 (47%), Positives = 78/111 (70%) Query: 27 MADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKD 86 MA + +G + R ++ + P LY+VL++ND+YTPMEFV+HVLQ FF D Sbjct: 1 MAGRDQDDQGDGSGGPNVGIATRTRARTKKPSLYKVLMLNDDYTPMEFVVHVLQQFFRMD 60 Query: 87 HETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 E A +ML VH +G+G CG+++YE+AE KVNQVM+++RQ+Q+PLQC +E+ Sbjct: 61 MEEATRVMLHVHQRGVGVCGIFSYEVAETKVNQVMDFARQNQHPLQCTLEK 111 >gi|161898748|ref|YP_191042.2| ATP-dependent Clp protease adaptor protein ClpS [Gluconobacter oxydans 621H] Length = 143 Score = 176 bits (446), Expect = 1e-42, Method: Composition-based stats. Identities = 52/105 (49%), Positives = 75/105 (71%) Query: 33 NKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKC 92 G + D + VR ++ R P +Y+VL++ND+YTPMEFV+HVL+ FF K + A Sbjct: 38 PGNGDGDQDLDIGVVVRPRTRTRKPSMYKVLMLNDDYTPMEFVVHVLERFFAKTRDEATS 97 Query: 93 IMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 IML+VH +G+G CGV+ YE+AE KV QVM+ +RQ+Q+PLQC +E+ Sbjct: 98 IMLQVHQRGVGICGVFTYEVAESKVTQVMDLARQNQHPLQCTIEK 142 >gi|312113135|ref|YP_004010731.1| ATP-dependent Clp protease adaptor protein ClpS [Rhodomicrobium vannielii ATCC 17100] gi|311218264|gb|ADP69632.1| ATP-dependent Clp protease adaptor protein ClpS [Rhodomicrobium vannielii ATCC 17100] Length = 128 Score = 176 bits (446), Expect = 1e-42, Method: Composition-based stats. Identities = 59/115 (51%), Positives = 79/115 (68%), Gaps = 3/115 (2%) Query: 26 FMADSRMNKKGIAEFDNCLDS--EVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFF 83 M + G + DN L + + K + P LY+VLL+ND+YTPMEFV++VL+ FF Sbjct: 15 RMVAAMAGNNGFKD-DNGLKTGAVTKTRPKTKRPSLYKVLLLNDDYTPMEFVVYVLERFF 73 Query: 84 YKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 K HE A IM+ VH +G+G CGVY YE+AE KV QVMN++RQHQ+PLQC ME++ Sbjct: 74 NKPHEEATLIMMHVHQKGVGICGVYTYEVAETKVTQVMNFARQHQHPLQCTMEKE 128 >gi|296283029|ref|ZP_06861027.1| ATP-dependent Clp protease adaptor protein ClpS [Citromicrobium bathyomarinum JL354] Length = 140 Score = 175 bits (445), Expect = 1e-42, Method: Composition-based stats. Identities = 51/126 (40%), Positives = 79/126 (62%), Gaps = 1/126 (0%) Query: 12 RVKRDGILALMSFIFMADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTP 71 R + L + + + G D + + +K + P Y+VL++ND+YTP Sbjct: 15 RPRDAAPLPSRAPTAAGNDDHGEDGRP-ADPNVGVATKTRAKPKKPSQYKVLMLNDDYTP 73 Query: 72 MEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPL 131 MEFV+ VL+ FF D E A +ML+VH +G+G CG++ YE+AE KVNQVM+++RQ+Q+PL Sbjct: 74 MEFVVIVLKRFFRMDMEEATRVMLQVHQRGVGVCGIFPYEVAETKVNQVMDFARQNQHPL 133 Query: 132 QCIMEQ 137 QC +E+ Sbjct: 134 QCTLEK 139 >gi|16126706|ref|NP_421270.1| ATP-dependent Clp protease adaptor protein ClpS [Caulobacter crescentus CB15] gi|21542323|sp|Q9A5I0|CLPS_CAUCR RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|13424016|gb|AAK24438.1| conserved hypothetical protein [Caulobacter crescentus CB15] Length = 119 Score = 175 bits (444), Expect = 2e-42, Method: Composition-based stats. Identities = 54/111 (48%), Positives = 72/111 (64%), Gaps = 3/111 (2%) Query: 27 MADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKD 86 MA+ + +G K + P LYRVL++ND+YTPMEFV++VL+ FF K Sbjct: 11 MAERKQGGQG---NGVGSSVVTEVKPKTQKPSLYRVLILNDDYTPMEFVVYVLERFFNKS 67 Query: 87 HETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 E A IML VH G+G CGVY YE+AE KV QV++ +R+HQ+PLQC ME+ Sbjct: 68 REDATRIMLHVHQNGVGVCGVYTYEVAETKVAQVIDSARRHQHPLQCTMEK 118 >gi|209545021|ref|YP_002277250.1| ATP-dependent Clp protease adaptor protein ClpS [Gluconacetobacter diazotrophicus PAl 5] gi|209532698|gb|ACI52635.1| ATP-dependent Clp protease adaptor protein ClpS [Gluconacetobacter diazotrophicus PAl 5] Length = 135 Score = 174 bits (443), Expect = 2e-42, Method: Composition-based stats. Identities = 54/125 (43%), Positives = 78/125 (62%), Gaps = 2/125 (1%) Query: 15 RDGILALMSFIFMADSRMNKKGIAEFDNC--LDSEVRFSSKVRVPKLYRVLLVNDNYTPM 72 R A N+ G ++ + + VR + R P +Y+VL++ND+YTPM Sbjct: 10 RGHTRAHGGNSPTRREGGNQDGQSDNPDSPTIGVVVRTRPQTRKPAMYKVLMLNDDYTPM 69 Query: 73 EFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQ 132 EFV+HVL+ FF K + A IML VH +G+G CGV+ YE+AE KV QVM+ +RQ+Q+PLQ Sbjct: 70 EFVVHVLERFFQKSRDEATDIMLHVHKRGVGVCGVFTYEVAETKVTQVMDLARQNQHPLQ 129 Query: 133 CIMEQ 137 C +E+ Sbjct: 130 CTIEK 134 >gi|86749515|ref|YP_486011.1| ATP-dependent Clp protease adaptor protein ClpS [Rhodopseudomonas palustris HaA2] gi|86572543|gb|ABD07100.1| ATP-dependent Clp protease adaptor protein ClpS [Rhodopseudomonas palustris HaA2] Length = 132 Score = 174 bits (443), Expect = 2e-42, Method: Composition-based stats. Identities = 61/124 (49%), Positives = 81/124 (65%), Gaps = 1/124 (0%) Query: 16 DGILALMSFIFMADSRMNKKGIAEFDN-CLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEF 74 D + A + + A G A + + K + P LYRVL++ND+YTPMEF Sbjct: 9 DSVPASVGLSYRATRMAGDGGRAGSGSPTTSVITKVKPKTKRPNLYRVLILNDDYTPMEF 68 Query: 75 VIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCI 134 V+HVL+ FF D E A +ML VHH GIGECGV+ YEIAE KV QVM+++R+HQ+PLQC+ Sbjct: 69 VVHVLEKFFQMDIEAATKVMLHVHHHGIGECGVFTYEIAETKVTQVMDFARKHQHPLQCV 128 Query: 135 MEQK 138 ME+K Sbjct: 129 MEKK 132 >gi|162149242|ref|YP_001603703.1| ATP-dependent Clp protease adaptor protein ClpS [Gluconacetobacter diazotrophicus PAl 5] gi|161787819|emb|CAP57417.1| putative ATP-dependent Clp protease adaptor protein clpS [Gluconacetobacter diazotrophicus PAl 5] Length = 146 Score = 174 bits (443), Expect = 3e-42, Method: Composition-based stats. Identities = 54/125 (43%), Positives = 78/125 (62%), Gaps = 2/125 (1%) Query: 15 RDGILALMSFIFMADSRMNKKGIAEFDNC--LDSEVRFSSKVRVPKLYRVLLVNDNYTPM 72 R A N+ G ++ + + VR + R P +Y+VL++ND+YTPM Sbjct: 21 RGHTRAHGGNSPTRREGGNQDGQSDNPDSPTIGVVVRTRPQTRKPAMYKVLMLNDDYTPM 80 Query: 73 EFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQ 132 EFV+HVL+ FF K + A IML VH +G+G CGV+ YE+AE KV QVM+ +RQ+Q+PLQ Sbjct: 81 EFVVHVLERFFQKSRDEATDIMLHVHKRGVGVCGVFTYEVAETKVTQVMDLARQNQHPLQ 140 Query: 133 CIMEQ 137 C +E+ Sbjct: 141 CTIEK 145 >gi|83310221|ref|YP_420485.1| ATP-dependent Clp protease adaptor protein ClpS [Magnetospirillum magneticum AMB-1] gi|123542818|sp|Q2W899|CLPS_MAGSA RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|82945062|dbj|BAE49926.1| ATP-dependent Clp protease adaptor protein clpS [Magnetospirillum magneticum AMB-1] Length = 119 Score = 174 bits (442), Expect = 3e-42, Method: Composition-based stats. Identities = 51/112 (45%), Positives = 79/112 (70%), Gaps = 2/112 (1%) Query: 27 MADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKD 86 M+++ +K+ + + ++ K + P +Y+VL++ND+YTPMEFV+HVL+ FF K Sbjct: 10 MSENGNDKRDGDDGQTGV--VIKTRPKTKKPSMYKVLMLNDDYTPMEFVVHVLERFFNKS 67 Query: 87 HETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 E A +ML VH +G+G CGVY YE+AE KV QVM+ +RQ+Q+PLQC +E++ Sbjct: 68 REDATRVMLHVHTRGVGICGVYTYEVAETKVTQVMDLARQNQHPLQCTIEKE 119 >gi|23502048|ref|NP_698175.1| ATP-dependent Clp protease adaptor protein ClpS [Brucella suis 1330] gi|62290083|ref|YP_221876.1| ATP-dependent Clp protease adaptor protein ClpS [Brucella abortus bv. 1 str. 9-941] gi|82700008|ref|YP_414582.1| ATP-dependent Clp protease adaptor protein ClpS [Brucella melitensis biovar Abortus 2308] gi|148559927|ref|YP_001259088.1| ATP-dependent Clp protease adaptor protein ClpS [Brucella ovis ATCC 25840] gi|225627638|ref|ZP_03785675.1| ATP-dependent Clp protease adapter protein clpS [Brucella ceti str. Cudo] gi|237815589|ref|ZP_04594586.1| ATP-dependent Clp protease adapter protein clpS [Brucella abortus str. 2308 A] gi|256369595|ref|YP_003107105.1| ATP-dependent Clp protease adaptor protein ClpS [Brucella microti CCM 4915] gi|297248480|ref|ZP_06932198.1| ATP-dependent Clp protease adaptor protein ClpS [Brucella abortus bv. 5 str. B3196] gi|23348003|gb|AAN30090.1| conserved hypothetical protein [Brucella suis 1330] gi|62196215|gb|AAX74515.1| conserved hypothetical protein [Brucella abortus bv. 1 str. 9-941] gi|82616109|emb|CAJ11148.1| Protein of unknown function DUF174 [Brucella melitensis biovar Abortus 2308] gi|148371184|gb|ABQ61163.1| ATP-dependent Clp protease adaptor protein ClpS [Brucella ovis ATCC 25840] gi|225617643|gb|EEH14688.1| ATP-dependent Clp protease adapter protein clpS [Brucella ceti str. Cudo] gi|237788887|gb|EEP63098.1| ATP-dependent Clp protease adapter protein clpS [Brucella abortus str. 2308 A] gi|255999757|gb|ACU48156.1| ATP-dependent Clp protease adaptor protein ClpS [Brucella microti CCM 4915] gi|297175649|gb|EFH34996.1| ATP-dependent Clp protease adaptor protein ClpS [Brucella abortus bv. 5 str. B3196] Length = 136 Score = 174 bits (442), Expect = 3e-42, Method: Composition-based stats. Identities = 58/106 (54%), Positives = 77/106 (72%) Query: 33 NKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKC 92 G ++ R K R P LYRVLL+ND+YTPMEFV+HVLQ FF K+ + A Sbjct: 31 KTNGGNGPESGTVVVTRTQPKTRKPSLYRVLLLNDDYTPMEFVVHVLQRFFQKNLDDATR 90 Query: 93 IMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 IML VH+ G+GECGV+ YE+AE KV+QVM+++RQ+Q+PLQC+ME+K Sbjct: 91 IMLHVHNHGVGECGVFTYEVAETKVSQVMDFARQNQHPLQCVMEKK 136 >gi|258541379|ref|YP_003186812.1| Clp protease adaptor protein ClpS [Acetobacter pasteurianus IFO 3283-01] gi|256632457|dbj|BAH98432.1| Clp protease adaptor protein ClpS [Acetobacter pasteurianus IFO 3283-01] gi|256635514|dbj|BAI01483.1| Clp protease adaptor protein ClpS [Acetobacter pasteurianus IFO 3283-03] gi|256638569|dbj|BAI04531.1| Clp protease adaptor protein ClpS [Acetobacter pasteurianus IFO 3283-07] gi|256641623|dbj|BAI07578.1| Clp protease adaptor protein ClpS [Acetobacter pasteurianus IFO 3283-22] gi|256644678|dbj|BAI10626.1| Clp protease adaptor protein ClpS [Acetobacter pasteurianus IFO 3283-26] gi|256647733|dbj|BAI13674.1| Clp protease adaptor protein ClpS [Acetobacter pasteurianus IFO 3283-32] gi|256650786|dbj|BAI16720.1| Clp protease adaptor protein ClpS [Acetobacter pasteurianus IFO 3283-01-42C] gi|256653777|dbj|BAI19704.1| Clp protease adaptor protein ClpS [Acetobacter pasteurianus IFO 3283-12] Length = 125 Score = 174 bits (441), Expect = 4e-42, Method: Composition-based stats. Identities = 52/108 (48%), Positives = 74/108 (68%) Query: 30 SRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHET 89 R ++ + VR K R P +Y+VL++ND+YTPMEFV++VL+ FF K+ E Sbjct: 17 RRGGGTDSSDDGADIGVVVRAKPKTRKPAMYKVLMLNDDYTPMEFVVYVLERFFQKNREE 76 Query: 90 AKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 A IML VH +G+G CGV+ YE+AE KV QVM+ +RQ+Q+PLQC +E+ Sbjct: 77 ATDIMLNVHRRGVGVCGVFTYEVAETKVAQVMDLARQNQHPLQCTIEK 124 >gi|239832059|ref|ZP_04680388.1| ATP-dependent Clp protease adapter protein clpS [Ochrobactrum intermedium LMG 3301] gi|239824326|gb|EEQ95894.1| ATP-dependent Clp protease adapter protein clpS [Ochrobactrum intermedium LMG 3301] Length = 148 Score = 174 bits (441), Expect = 4e-42, Method: Composition-based stats. Identities = 58/108 (53%), Positives = 78/108 (72%) Query: 31 RMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETA 90 + G +N R K + P LYRVLL+ND+YTPMEFV+HVLQ FF K+ + A Sbjct: 41 QSKTDGGNGPENGTVVVTRTQPKTKKPSLYRVLLLNDDYTPMEFVVHVLQRFFQKNRDDA 100 Query: 91 KCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 IML VH+ G+GECGV+ YE+AE KV+QVM+++RQ+Q+PLQC+ME+K Sbjct: 101 TRIMLHVHNHGVGECGVFTYEVAETKVSQVMDFARQNQHPLQCVMEKK 148 >gi|17987098|ref|NP_539732.1| ATP-dependent Clp protease adaptor protein ClpS [Brucella melitensis bv. 1 str. 16M] gi|17982759|gb|AAL51996.1| protein ylja [Brucella melitensis bv. 1 str. 16M] Length = 136 Score = 174 bits (441), Expect = 4e-42, Method: Composition-based stats. Identities = 58/106 (54%), Positives = 77/106 (72%) Query: 33 NKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKC 92 G ++ R K R P LYRVLL+ND+YTPMEFV+HVLQ FF K+ + A Sbjct: 31 KTNGGNGPESGTVVVTRTQPKTRKPSLYRVLLLNDDYTPMEFVVHVLQRFFQKNLDDATR 90 Query: 93 IMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 IML VH+ G+GECGV+ YE+AE KV+QVM+++RQ+Q+PLQC+ME+K Sbjct: 91 IMLHVHNHGVGECGVFTYEVAETKVSQVMDFARQNQHPLQCVMEKK 136 >gi|329114968|ref|ZP_08243723.1| ATP-dependent Clp protease adapter protein ClpS [Acetobacter pomorum DM001] gi|326695411|gb|EGE47097.1| ATP-dependent Clp protease adapter protein ClpS [Acetobacter pomorum DM001] Length = 117 Score = 173 bits (440), Expect = 5e-42, Method: Composition-based stats. Identities = 52/108 (48%), Positives = 74/108 (68%) Query: 30 SRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHET 89 R ++ + VR K R P +Y+VL++ND+YTPMEFV++VL+ FF K+ E Sbjct: 9 RRGGSTDSSDDGADIGVVVRAKPKTRKPAMYKVLMLNDDYTPMEFVVYVLERFFQKNREE 68 Query: 90 AKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 A IML VH +G+G CGV+ YE+AE KV QVM+ +RQ+Q+PLQC +E+ Sbjct: 69 ATDIMLNVHRRGVGVCGVFTYEVAETKVAQVMDLARQNQHPLQCTIEK 116 >gi|221235488|ref|YP_002517925.1| ATP-dependent Clp protease adaptor protein ClpS [Caulobacter crescentus NA1000] gi|254763812|sp|B8GZM8|CLPS_CAUCN RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|220964661|gb|ACL96017.1| ATP-dependent Clp protease adaptor protein ClpS [Caulobacter crescentus NA1000] Length = 109 Score = 173 bits (440), Expect = 6e-42, Method: Composition-based stats. Identities = 54/111 (48%), Positives = 72/111 (64%), Gaps = 3/111 (2%) Query: 27 MADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKD 86 MA+ + +G K + P LYRVL++ND+YTPMEFV++VL+ FF K Sbjct: 1 MAERKQGGQG---NGVGSSVVTEVKPKTQKPSLYRVLILNDDYTPMEFVVYVLERFFNKS 57 Query: 87 HETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 E A IML VH G+G CGVY YE+AE KV QV++ +R+HQ+PLQC ME+ Sbjct: 58 REDATRIMLHVHQNGVGVCGVYTYEVAETKVAQVIDSARRHQHPLQCTMEK 108 >gi|190891596|ref|YP_001978138.1| ATP-dependent Clp protease adaptor protein [Rhizobium etli CIAT 652] gi|190696875|gb|ACE90960.1| ATP-dependent Clp protease adaptor protein [Rhizobium etli CIAT 652] Length = 117 Score = 173 bits (439), Expect = 6e-42, Method: Composition-based stats. Identities = 62/111 (55%), Positives = 80/111 (72%), Gaps = 3/111 (2%) Query: 31 RMNKKGIAEFDNC---LDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDH 87 RM G DN R K + P LYRVLL+ND+YTPMEFVIH+L+ FF KD Sbjct: 7 RMQNNGERNGDNGNRGTSVITRTKPKTKKPNLYRVLLLNDDYTPMEFVIHILERFFQKDR 66 Query: 88 ETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 E+A IML VH+ G+GECG++ YE+AE KV+QVM+++RQHQ+PLQC+ME+K Sbjct: 67 ESATRIMLHVHNHGVGECGIFTYEVAETKVSQVMDFARQHQHPLQCVMEKK 117 >gi|299135164|ref|ZP_07028355.1| ATP-dependent Clp protease adaptor protein ClpS [Afipia sp. 1NLS2] gi|298590141|gb|EFI50345.1| ATP-dependent Clp protease adaptor protein ClpS [Afipia sp. 1NLS2] Length = 228 Score = 173 bits (438), Expect = 9e-42, Method: Composition-based stats. Identities = 60/131 (45%), Positives = 81/131 (61%), Gaps = 4/131 (3%) Query: 8 SMYHRVKRDGILALMSFIFMADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVND 67 +M + + G + I D + + + P LYRVL++ND Sbjct: 102 AMTQKTGQTGERRSTAPIMSKDDGRPDGTGP----GTSVITKTKPRTKRPSLYRVLILND 157 Query: 68 NYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQH 127 +YTPMEFV+HVL+ FF KD E A IML VHH GIGECG++ YEIAE KV QVM+++R+H Sbjct: 158 DYTPMEFVVHVLERFFQKDVEAATKIMLHVHHHGIGECGIFTYEIAETKVTQVMDFARKH 217 Query: 128 QYPLQCIMEQK 138 Q+PLQC+ME+K Sbjct: 218 QHPLQCVMEKK 228 >gi|188991659|ref|YP_001903669.1| hypothetical protein xccb100_2265 [Xanthomonas campestris pv. campestris str. B100] gi|167733419|emb|CAP51620.1| unnamed protein product [Xanthomonas campestris pv. campestris] Length = 169 Score = 173 bits (438), Expect = 9e-42, Method: Composition-based stats. Identities = 55/109 (50%), Positives = 71/109 (65%), Gaps = 1/109 (0%) Query: 29 DSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHE 88 + RM +K E D+ L E +V P Y+VLL+ND+YTPM+FV+ VLQ FF D E Sbjct: 61 NGRMPRKTSHEHDHGLVVET-SKPEVAPPPRYQVLLLNDDYTPMDFVVTVLQQFFNLDLE 119 Query: 89 TAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 A +ML VH +G G CGVY+ E+AE KV QV +SR +Q+PL C MEQ Sbjct: 120 RATQVMLHVHTRGRGVCGVYSREVAESKVAQVNEFSRMNQHPLLCTMEQ 168 >gi|126031981|gb|ABN71557.1| putative ATP-dependent Clp protease adaptor protein ClpS [uncultured bacterium] Length = 131 Score = 173 bits (438), Expect = 9e-42, Method: Composition-based stats. Identities = 49/123 (39%), Positives = 78/123 (63%), Gaps = 3/123 (2%) Query: 18 ILALMSFIFMADS---RMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEF 74 A F+ ++ ++ G + + + +K + P ++VL++ND+YTPMEF Sbjct: 8 APAFAPFVRASERAAGDDDESGRPGDQDQVGVATKTRTKPKKPSQFKVLMLNDDYTPMEF 67 Query: 75 VIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCI 134 V+ L+ FF D E A +ML VH +G+G CG++ YEIAE KVNQVM+++RQ+Q+PLQC Sbjct: 68 VVMCLKRFFSMDLEQATRVMLHVHQRGVGVCGIFPYEIAETKVNQVMDFARQNQHPLQCT 127 Query: 135 MEQ 137 +E+ Sbjct: 128 LEK 130 >gi|83951021|ref|ZP_00959754.1| ATP-dependent Clp protease, adaptor protein ClpS [Roseovarius nubinhibens ISM] gi|83838920|gb|EAP78216.1| ATP-dependent Clp protease, adaptor protein ClpS [Roseovarius nubinhibens ISM] Length = 114 Score = 172 bits (437), Expect = 1e-41, Method: Composition-based stats. Identities = 54/108 (50%), Positives = 75/108 (69%) Query: 31 RMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETA 90 ++N G + D + V K + P LY+VLL+ND+YTPMEFV+HVL+ FF H A Sbjct: 7 QLNSSGQDDGDGHISVAVATRPKTKRPPLYKVLLLNDDYTPMEFVVHVLERFFGMTHAEA 66 Query: 91 KCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 IML VH +G+ GV+++EIAE KV QVM+++RQHQ+PLQC ME++ Sbjct: 67 FEIMLTVHKKGVAVVGVFSHEIAETKVAQVMDFARQHQHPLQCTMEKE 114 >gi|67460154|sp|Q5FTB0|CLPS_GLUOX RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|58001492|gb|AAW60386.1| Hypothetical protein GOX0608 [Gluconobacter oxydans 621H] Length = 119 Score = 172 bits (437), Expect = 1e-41, Method: Composition-based stats. Identities = 52/105 (49%), Positives = 75/105 (71%) Query: 33 NKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKC 92 G + D + VR ++ R P +Y+VL++ND+YTPMEFV+HVL+ FF K + A Sbjct: 14 PGNGDGDQDLDIGVVVRPRTRTRKPSMYKVLMLNDDYTPMEFVVHVLERFFAKTRDEATS 73 Query: 93 IMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 IML+VH +G+G CGV+ YE+AE KV QVM+ +RQ+Q+PLQC +E+ Sbjct: 74 IMLQVHQRGVGICGVFTYEVAESKVTQVMDLARQNQHPLQCTIEK 118 >gi|304321615|ref|YP_003855258.1| ATP-dependent Clp protease adaptor protein ClpS [Parvularcula bermudensis HTCC2503] gi|303300517|gb|ADM10116.1| ATP-dependent Clp protease adaptor protein ClpS [Parvularcula bermudensis HTCC2503] Length = 146 Score = 172 bits (437), Expect = 1e-41, Method: Composition-based stats. Identities = 50/113 (44%), Positives = 76/113 (67%) Query: 26 FMADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYK 85 M M++ G + + + V+ K + P LY+VLL+ND+YTP EFV+ +L+ F+K Sbjct: 34 PMRSINMSEDGDEKPGGNVATIVKEKPKAKRPSLYKVLLLNDDYTPQEFVVWLLEAVFHK 93 Query: 86 DHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 H+ A IML VH+ G+G CGVY YE+AE KV QV+ +R++++PLQC ME++ Sbjct: 94 GHDEALRIMLHVHNHGVGICGVYTYEVAETKVAQVLELARRNEHPLQCTMERE 146 >gi|295690174|ref|YP_003593867.1| ATP-dependent Clp protease adaptor protein ClpS [Caulobacter segnis ATCC 21756] gi|295432077|gb|ADG11249.1| ATP-dependent Clp protease adaptor protein ClpS [Caulobacter segnis ATCC 21756] Length = 109 Score = 172 bits (437), Expect = 1e-41, Method: Composition-based stats. Identities = 54/111 (48%), Positives = 71/111 (63%), Gaps = 3/111 (2%) Query: 27 MADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKD 86 MA+ + G K + P LYRVL++ND+YTPMEFV++VL+ FF K Sbjct: 1 MAERKQ---GGQSNGAGSSVVTEVKPKTQKPSLYRVLILNDDYTPMEFVVYVLERFFNKS 57 Query: 87 HETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 E A IML VH G+G CGVY YE+AE KV QV++ +R+HQ+PLQC ME+ Sbjct: 58 REDATRIMLHVHQNGVGVCGVYTYEVAETKVAQVIDSARRHQHPLQCTMEK 108 >gi|260566297|ref|ZP_05836767.1| ATP-dependent Clp protease adapter protein clpS [Brucella suis bv. 4 str. 40] gi|261214163|ref|ZP_05928444.1| ATP-dependent Clp protease adapter protein clpS [Brucella abortus bv. 3 str. Tulya] gi|261222336|ref|ZP_05936617.1| ATP-dependent Clp protease adapter protein clpS [Brucella ceti B1/94] gi|261314110|ref|ZP_05953307.1| ATP-dependent Clp protease adapter protein clpS [Brucella pinnipedialis M163/99/10] gi|261317803|ref|ZP_05957000.1| ATP-dependent Clp protease adapter protein clpS [Brucella pinnipedialis B2/94] gi|261755135|ref|ZP_05998844.1| ATP-dependent Clp protease adapter protein clpS [Brucella suis bv. 3 str. 686] gi|261758359|ref|ZP_06002068.1| ATP-dependent Clp protease adapter protein clpS [Brucella sp. F5/99] gi|265988834|ref|ZP_06101391.1| ATP-dependent Clp protease adapter protein clpS [Brucella pinnipedialis M292/94/1] gi|265991249|ref|ZP_06103806.1| ATP-dependent Clp protease adapter protein clpS [Brucella melitensis bv. 1 str. Rev.1] gi|265995085|ref|ZP_06107642.1| ATP-dependent Clp protease adapter protein clpS [Brucella melitensis bv. 3 str. Ether] gi|265999441|ref|ZP_05466371.2| ATP-dependent Clp protease adapter protein clpS [Brucella melitensis bv. 2 str. 63/9] gi|294852509|ref|ZP_06793182.1| ATP-dependent Clp protease adaptor protein ClpS [Brucella sp. NVSL 07-0026] gi|260155815|gb|EEW90895.1| ATP-dependent Clp protease adapter protein clpS [Brucella suis bv. 4 str. 40] gi|260915770|gb|EEX82631.1| ATP-dependent Clp protease adapter protein clpS [Brucella abortus bv. 3 str. Tulya] gi|260920920|gb|EEX87573.1| ATP-dependent Clp protease adapter protein clpS [Brucella ceti B1/94] gi|261297026|gb|EEY00523.1| ATP-dependent Clp protease adapter protein clpS [Brucella pinnipedialis B2/94] gi|261303136|gb|EEY06633.1| ATP-dependent Clp protease adapter protein clpS [Brucella pinnipedialis M163/99/10] gi|261738343|gb|EEY26339.1| ATP-dependent Clp protease adapter protein clpS [Brucella sp. F5/99] gi|261744888|gb|EEY32814.1| ATP-dependent Clp protease adapter protein clpS [Brucella suis bv. 3 str. 686] gi|262766198|gb|EEZ11987.1| ATP-dependent Clp protease adapter protein clpS [Brucella melitensis bv. 3 str. Ether] gi|263002033|gb|EEZ14608.1| ATP-dependent Clp protease adapter protein clpS [Brucella melitensis bv. 1 str. Rev.1] gi|263093970|gb|EEZ17904.1| ATP-dependent Clp protease adapter protein clpS [Brucella melitensis bv. 2 str. 63/9] gi|264661031|gb|EEZ31292.1| ATP-dependent Clp protease adapter protein clpS [Brucella pinnipedialis M292/94/1] gi|294821098|gb|EFG38097.1| ATP-dependent Clp protease adaptor protein ClpS [Brucella sp. NVSL 07-0026] Length = 109 Score = 172 bits (437), Expect = 1e-41, Method: Composition-based stats. Identities = 58/106 (54%), Positives = 77/106 (72%) Query: 33 NKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKC 92 G ++ R K R P LYRVLL+ND+YTPMEFV+HVLQ FF K+ + A Sbjct: 4 KTNGGNGPESGTVVVTRTQPKTRKPSLYRVLLLNDDYTPMEFVVHVLQRFFQKNLDDATR 63 Query: 93 IMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 IML VH+ G+GECGV+ YE+AE KV+QVM+++RQ+Q+PLQC+ME+K Sbjct: 64 IMLHVHNHGVGECGVFTYEVAETKVSQVMDFARQNQHPLQCVMEKK 109 >gi|209884899|ref|YP_002288756.1| ATP-dependent Clp protease adaptor protein ClpS [Oligotropha carboxidovorans OM5] gi|209873095|gb|ACI92891.1| ATP-dependent Clp protease adaptor protein ClpS [Oligotropha carboxidovorans OM5] Length = 179 Score = 172 bits (436), Expect = 1e-41, Method: Composition-based stats. Identities = 60/123 (48%), Positives = 83/123 (67%), Gaps = 2/123 (1%) Query: 16 DGILALMSFIFMADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFV 75 + + + + M+ + G + + R + + P LYRVL++ND+YTPMEFV Sbjct: 59 ESVRRAAATVRMSKNDDRPDGTSGPGTSV--ITRTKPRAKRPSLYRVLILNDDYTPMEFV 116 Query: 76 IHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIM 135 +HVL+ FF KD E A IML VHH GIGECGV+ YEIAE KV QVM+++R+HQ+PLQC+M Sbjct: 117 VHVLEKFFQKDVEAATKIMLHVHHHGIGECGVFTYEIAETKVTQVMDFARKHQHPLQCVM 176 Query: 136 EQK 138 E+K Sbjct: 177 EKK 179 >gi|153009350|ref|YP_001370565.1| ATP-dependent Clp protease adaptor protein ClpS [Ochrobactrum anthropi ATCC 49188] gi|151561238|gb|ABS14736.1| ATP-dependent Clp protease adaptor protein ClpS [Ochrobactrum anthropi ATCC 49188] Length = 124 Score = 172 bits (436), Expect = 1e-41, Method: Composition-based stats. Identities = 58/108 (53%), Positives = 78/108 (72%) Query: 31 RMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETA 90 + G +N R K + P LYRVLL+ND+YTPMEFV+HVLQ FF K+ + A Sbjct: 17 QSKTDGGNGPENGTVLVTRTQPKTKKPSLYRVLLLNDDYTPMEFVVHVLQRFFQKNQDDA 76 Query: 91 KCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 IML VH+ G+GECGV+ YE+AE KV+QVM+++RQ+Q+PLQC+ME+K Sbjct: 77 TRIMLHVHNHGVGECGVFTYEVAETKVSQVMDFARQNQHPLQCVMEKK 124 >gi|86357527|ref|YP_469419.1| ATP-dependent Clp protease adaptor protein ClpS [Rhizobium etli CFN 42] gi|218460323|ref|ZP_03500414.1| ATP-dependent Clp protease adaptor protein ClpS [Rhizobium etli Kim 5] gi|86281629|gb|ABC90692.1| ATP-dependent Clp protease adaptor protein [Rhizobium etli CFN 42] Length = 117 Score = 172 bits (436), Expect = 2e-41, Method: Composition-based stats. Identities = 59/118 (50%), Positives = 83/118 (70%), Gaps = 2/118 (1%) Query: 21 LMSFIFMADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQ 80 + I M + +++ + R K + P LYRVLL+ND+YTPMEFVIH+L+ Sbjct: 2 IAKPIRMQND--SERNGDNGNRGTSVITRTKPKTKKPNLYRVLLLNDDYTPMEFVIHILE 59 Query: 81 NFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 FF KD E+A IML VH+ G+GECG++ YE+AE KV+QVM+++RQHQ+PLQC+ME+K Sbjct: 60 RFFQKDRESATRIMLHVHNHGVGECGIFTYEVAETKVSQVMDFARQHQHPLQCVMEKK 117 >gi|161619121|ref|YP_001593008.1| ATP-dependent Clp protease adaptor protein ClpS [Brucella canis ATCC 23365] gi|163843434|ref|YP_001627838.1| ATP-dependent Clp protease adaptor protein ClpS [Brucella suis ATCC 23445] gi|189024321|ref|YP_001935089.1| Protein of unknown function DUF174 [Brucella abortus S19] gi|254689393|ref|ZP_05152647.1| ATP-dependent Clp protease adaptor protein ClpS [Brucella abortus bv. 6 str. 870] gi|254693877|ref|ZP_05155705.1| ATP-dependent Clp protease adaptor protein ClpS [Brucella abortus bv. 3 str. Tulya] gi|254697528|ref|ZP_05159356.1| ATP-dependent Clp protease adaptor protein ClpS [Brucella abortus bv. 2 str. 86/8/59] gi|254704457|ref|ZP_05166285.1| ATP-dependent Clp protease adaptor protein ClpS [Brucella suis bv. 3 str. 686] gi|254706649|ref|ZP_05168477.1| ATP-dependent Clp protease adaptor protein ClpS [Brucella pinnipedialis M163/99/10] gi|254710244|ref|ZP_05172055.1| ATP-dependent Clp protease adaptor protein ClpS [Brucella pinnipedialis B2/94] gi|254714240|ref|ZP_05176051.1| ATP-dependent Clp protease adaptor protein ClpS [Brucella ceti M644/93/1] gi|254717676|ref|ZP_05179487.1| ATP-dependent Clp protease adaptor protein ClpS [Brucella ceti M13/05/1] gi|254719232|ref|ZP_05181043.1| ATP-dependent Clp protease adaptor protein ClpS [Brucella sp. 83/13] gi|254730423|ref|ZP_05189001.1| ATP-dependent Clp protease adaptor protein ClpS [Brucella abortus bv. 4 str. 292] gi|256031738|ref|ZP_05445352.1| ATP-dependent Clp protease adaptor protein ClpS [Brucella pinnipedialis M292/94/1] gi|256061251|ref|ZP_05451402.1| ATP-dependent Clp protease adaptor protein ClpS [Brucella neotomae 5K33] gi|256159904|ref|ZP_05457626.1| ATP-dependent Clp protease adaptor protein ClpS [Brucella ceti M490/95/1] gi|256255138|ref|ZP_05460674.1| ATP-dependent Clp protease adaptor protein ClpS [Brucella ceti B1/94] gi|256257639|ref|ZP_05463175.1| ATP-dependent Clp protease adaptor protein ClpS [Brucella abortus bv. 9 str. C68] gi|260168871|ref|ZP_05755682.1| ATP-dependent Clp protease adaptor protein ClpS [Brucella sp. F5/99] gi|260546633|ref|ZP_05822372.1| ATP-dependent Clp protease adapter protein clpS [Brucella abortus NCTC 8038] gi|260754911|ref|ZP_05867259.1| ATP-dependent Clp protease adapter protein clpS [Brucella abortus bv. 6 str. 870] gi|260758128|ref|ZP_05870476.1| ATP-dependent Clp protease adapter protein clpS [Brucella abortus bv. 4 str. 292] gi|260761954|ref|ZP_05874297.1| ATP-dependent Clp protease adapter protein clpS [Brucella abortus bv. 2 str. 86/8/59] gi|260883923|ref|ZP_05895537.1| ATP-dependent Clp protease adapter protein clpS [Brucella abortus bv. 9 str. C68] gi|261219517|ref|ZP_05933798.1| ATP-dependent Clp protease adapter protein clpS [Brucella ceti M13/05/1] gi|261322012|ref|ZP_05961209.1| ATP-dependent Clp protease adapter protein clpS [Brucella ceti M644/93/1] gi|261325259|ref|ZP_05964456.1| ATP-dependent Clp protease adapter protein clpS [Brucella neotomae 5K33] gi|265984227|ref|ZP_06096962.1| ATP-dependent Clp protease adapter protein clpS [Brucella sp. 83/13] gi|265998300|ref|ZP_06110857.1| ATP-dependent Clp protease adapter protein clpS [Brucella ceti M490/95/1] gi|306837981|ref|ZP_07470839.1| ATP-dependent Clp protease adaptor protein ClpS [Brucella sp. NF 2653] gi|306841893|ref|ZP_07474573.1| ATP-dependent Clp protease adaptor protein ClpS [Brucella sp. BO2] gi|306844034|ref|ZP_07476629.1| ATP-dependent Clp protease adaptor protein ClpS [Brucella sp. BO1] gi|37077259|sp|Q8G0C9|CLPS_BRUSU RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|189082472|sp|A9M5I2|CLPS_BRUC2 RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|189082473|sp|B0CGW7|CLPS_BRUSI RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|238689379|sp|B2S618|CLPS_BRUA1 RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|161335932|gb|ABX62237.1| ATP-dependent Clp protease adaptor protein clpS [Brucella canis ATCC 23365] gi|163674157|gb|ABY38268.1| ATP-dependent Clp protease adaptor protein clpS [Brucella suis ATCC 23445] gi|189019893|gb|ACD72615.1| Protein of unknown function DUF174 [Brucella abortus S19] gi|260095683|gb|EEW79560.1| ATP-dependent Clp protease adapter protein clpS [Brucella abortus NCTC 8038] gi|260668446|gb|EEX55386.1| ATP-dependent Clp protease adapter protein clpS [Brucella abortus bv. 4 str. 292] gi|260672386|gb|EEX59207.1| ATP-dependent Clp protease adapter protein clpS [Brucella abortus bv. 2 str. 86/8/59] gi|260675019|gb|EEX61840.1| ATP-dependent Clp protease adapter protein clpS [Brucella abortus bv. 6 str. 870] gi|260873451|gb|EEX80520.1| ATP-dependent Clp protease adapter protein clpS [Brucella abortus bv. 9 str. C68] gi|260924606|gb|EEX91174.1| ATP-dependent Clp protease adapter protein clpS [Brucella ceti M13/05/1] gi|261294702|gb|EEX98198.1| ATP-dependent Clp protease adapter protein clpS [Brucella ceti M644/93/1] gi|261301239|gb|EEY04736.1| ATP-dependent Clp protease adapter protein clpS [Brucella neotomae 5K33] gi|262552768|gb|EEZ08758.1| ATP-dependent Clp protease adapter protein clpS [Brucella ceti M490/95/1] gi|264662819|gb|EEZ33080.1| ATP-dependent Clp protease adapter protein clpS [Brucella sp. 83/13] gi|306275789|gb|EFM57513.1| ATP-dependent Clp protease adaptor protein ClpS [Brucella sp. BO1] gi|306288023|gb|EFM59425.1| ATP-dependent Clp protease adaptor protein ClpS [Brucella sp. BO2] gi|306406905|gb|EFM63126.1| ATP-dependent Clp protease adaptor protein ClpS [Brucella sp. NF 2653] Length = 116 Score = 172 bits (436), Expect = 2e-41, Method: Composition-based stats. Identities = 58/106 (54%), Positives = 77/106 (72%) Query: 33 NKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKC 92 G ++ R K R P LYRVLL+ND+YTPMEFV+HVLQ FF K+ + A Sbjct: 11 KTNGGNGPESGTVVVTRTQPKTRKPSLYRVLLLNDDYTPMEFVVHVLQRFFQKNLDDATR 70 Query: 93 IMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 IML VH+ G+GECGV+ YE+AE KV+QVM+++RQ+Q+PLQC+ME+K Sbjct: 71 IMLHVHNHGVGECGVFTYEVAETKVSQVMDFARQNQHPLQCVMEKK 116 >gi|225852667|ref|YP_002732900.1| ATP-dependent Clp protease adaptor protein ClpS [Brucella melitensis ATCC 23457] gi|256044825|ref|ZP_05447729.1| ATP-dependent Clp protease adaptor protein ClpS [Brucella melitensis bv. 1 str. Rev.1] gi|256113730|ref|ZP_05454534.1| ATP-dependent Clp protease adaptor protein ClpS [Brucella melitensis bv. 3 str. Ether] gi|260565575|ref|ZP_05836059.1| ATP-dependent Clp protease adapter protein clpS [Brucella melitensis bv. 1 str. 16M] gi|21542304|sp|Q8YHI3|CLPS_BRUME RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|254763811|sp|C0RJD8|CLPS_BRUMB RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|225641032|gb|ACO00946.1| ATP-dependent Clp protease adapter protein clpS [Brucella melitensis ATCC 23457] gi|260151643|gb|EEW86737.1| ATP-dependent Clp protease adapter protein clpS [Brucella melitensis bv. 1 str. 16M] gi|326409188|gb|ADZ66253.1| ATP-dependent Clp protease adaptor protein ClpS [Brucella melitensis M28] Length = 116 Score = 171 bits (435), Expect = 2e-41, Method: Composition-based stats. Identities = 58/106 (54%), Positives = 77/106 (72%) Query: 33 NKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKC 92 G ++ R K R P LYRVLL+ND+YTPMEFV+HVLQ FF K+ + A Sbjct: 11 KTNGGNGPESGTVVVTRTQPKTRKPSLYRVLLLNDDYTPMEFVVHVLQRFFQKNLDDATR 70 Query: 93 IMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 IML VH+ G+GECGV+ YE+AE KV+QVM+++RQ+Q+PLQC+ME+K Sbjct: 71 IMLHVHNHGVGECGVFTYEVAETKVSQVMDFARQNQHPLQCVMEKK 116 >gi|90419585|ref|ZP_01227495.1| ATP-dependent Clp protease adaptor protein [Aurantimonas manganoxydans SI85-9A1] gi|90336522|gb|EAS50263.1| ATP-dependent Clp protease adaptor protein [Aurantimonas manganoxydans SI85-9A1] Length = 122 Score = 171 bits (435), Expect = 2e-41, Method: Composition-based stats. Identities = 61/108 (56%), Positives = 77/108 (71%) Query: 30 SRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHET 89 S+ K D + R K + P LYRVLL+ND+YTPMEFVIHVL+ FF KD E Sbjct: 14 SQAGKDDDQVPDRGTEVITRTKPKTQKPSLYRVLLLNDDYTPMEFVIHVLERFFQKDREA 73 Query: 90 AKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 A IML VH+ G+GECGV+ YE+AE KV QVM+++RQHQ+PLQC+ME+ Sbjct: 74 ATRIMLHVHNHGVGECGVFTYEVAETKVTQVMDFARQHQHPLQCVMEK 121 >gi|148261528|ref|YP_001235655.1| ATP-dependent Clp protease adaptor protein ClpS [Acidiphilium cryptum JF-5] gi|326405016|ref|YP_004285098.1| ATP-dependent Clp protease adaptor protein ClpS [Acidiphilium multivorum AIU301] gi|146403209|gb|ABQ31736.1| ATP-dependent Clp protease adaptor protein ClpS [Acidiphilium cryptum JF-5] gi|325051878|dbj|BAJ82216.1| ATP-dependent Clp protease adaptor protein ClpS [Acidiphilium multivorum AIU301] Length = 118 Score = 171 bits (435), Expect = 2e-41, Method: Composition-based stats. Identities = 53/109 (48%), Positives = 75/109 (68%), Gaps = 1/109 (0%) Query: 30 SRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHET 89 S +++G R +K R P LY+VL++ND+YTPMEFV+HVL+ FF K + Sbjct: 11 SGSDRRGTGN-GLGTGVATRTRTKTRKPSLYKVLMLNDDYTPMEFVVHVLERFFGKSRQE 69 Query: 90 AKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 A+ IML VH +G+G CGV+ YE+AE KV QVM+ +RQ Q+PLQC +E++ Sbjct: 70 AERIMLHVHRRGVGVCGVFTYEVAETKVTQVMDLARQSQHPLQCTIEKE 118 >gi|296116796|ref|ZP_06835402.1| ATP-dependent Clp protease adaptor protein ClpS [Gluconacetobacter hansenii ATCC 23769] gi|295976597|gb|EFG83369.1| ATP-dependent Clp protease adaptor protein ClpS [Gluconacetobacter hansenii ATCC 23769] Length = 134 Score = 171 bits (434), Expect = 3e-41, Method: Composition-based stats. Identities = 53/111 (47%), Positives = 75/111 (67%), Gaps = 1/111 (0%) Query: 28 ADSRMNKKGIAEFDNCL-DSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKD 86 R + G D+ + +R + R P +Y+VL++ND+YTPMEFV+HVL+ FF K Sbjct: 23 PPRRPDGTGENGNDDGMAGVVIRTRPQTRKPAMYKVLMLNDDYTPMEFVVHVLERFFQKS 82 Query: 87 HETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 E A IML VH +G+G CGV+ YE+AE KV QVM+ +RQ+Q+PLQC +E+ Sbjct: 83 REEATDIMLHVHKRGVGVCGVFTYEVAETKVTQVMDLARQNQHPLQCTIEK 133 >gi|87198523|ref|YP_495780.1| ATP-dependent Clp protease adaptor protein ClpS [Novosphingobium aromaticivorans DSM 12444] gi|87134204|gb|ABD24946.1| ATP-dependent Clp protease adaptor protein ClpS [Novosphingobium aromaticivorans DSM 12444] Length = 126 Score = 171 bits (433), Expect = 3e-41, Method: Composition-based stats. Identities = 50/123 (40%), Positives = 76/123 (61%), Gaps = 2/123 (1%) Query: 15 RDGILALMSFIFMADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEF 74 R + L A + D + + ++ + P ++VL++ND+YTPMEF Sbjct: 5 RLALPDLSVPQRCAGDEDTR--GPGGDEQIGIATKTRARPKKPSQFKVLMLNDDYTPMEF 62 Query: 75 VIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCI 134 V+ VL+ FF D E A +ML VH +G+G CG++ YEIAE KVNQVM+++RQ+Q+PLQC Sbjct: 63 VVMVLKRFFNMDLEQATRVMLHVHQRGVGVCGIFPYEIAETKVNQVMDFARQNQHPLQCT 122 Query: 135 MEQ 137 +E+ Sbjct: 123 LEK 125 >gi|90424816|ref|YP_533186.1| ATP-dependent Clp protease adaptor protein ClpS [Rhodopseudomonas palustris BisB18] gi|90106830|gb|ABD88867.1| ATP-dependent Clp protease adaptor protein ClpS [Rhodopseudomonas palustris BisB18] Length = 137 Score = 171 bits (433), Expect = 3e-41, Method: Composition-based stats. Identities = 62/131 (47%), Positives = 81/131 (61%), Gaps = 4/131 (3%) Query: 8 SMYHRVKRDGILALMSFIFMADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVND 67 S +HR L M + G + + K + P LYRVL++ND Sbjct: 11 SPFHRSATQSRLRSAP--RMGNDEGRSSGPGNPATSV--ITKVKPKTKRPNLYRVLILND 66 Query: 68 NYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQH 127 +YTPMEFV+HVL+ FF D E A +ML VHH GIGECGV+ YEIAE KV QVM+++R+H Sbjct: 67 DYTPMEFVVHVLEKFFQMDVEAATQVMLHVHHHGIGECGVFTYEIAETKVTQVMDFARKH 126 Query: 128 QYPLQCIMEQK 138 Q+PLQC+ME+K Sbjct: 127 QHPLQCVMEKK 137 >gi|114765842|ref|ZP_01444935.1| ATP-dependent Clp protease, adaptor protein ClpS [Pelagibaca bermudensis HTCC2601] gi|114541841|gb|EAU44878.1| ATP-dependent Clp protease, adaptor protein ClpS [Roseovarius sp. HTCC2601] Length = 120 Score = 171 bits (433), Expect = 4e-41, Method: Composition-based stats. Identities = 51/101 (50%), Positives = 72/101 (71%) Query: 38 AEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKV 97 + D D ++ K + P LY+VLL+ND+YTPMEFV+HVL+ FF H A IML V Sbjct: 20 GDGDGDADVVLQTKPKTKRPPLYKVLLLNDDYTPMEFVVHVLERFFGMSHAQAFEIMLTV 79 Query: 98 HHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 H +G+ GV+++EIAE KV QVM+++R+HQ+PLQC ME++ Sbjct: 80 HKKGVAVVGVFSHEIAETKVGQVMDFARRHQHPLQCTMEKE 120 >gi|209549170|ref|YP_002281087.1| ATP-dependent Clp protease adaptor protein ClpS [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209534926|gb|ACI54861.1| ATP-dependent Clp protease adaptor protein ClpS [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 116 Score = 171 bits (433), Expect = 4e-41, Method: Composition-based stats. Identities = 62/118 (52%), Positives = 84/118 (71%), Gaps = 3/118 (2%) Query: 21 LMSFIFMADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQ 80 + I M + ++ G E N R K + P LYRVLL+ND+YTPMEFVIH+L+ Sbjct: 2 IAKPIRMQND-SDRNG--ENGNRTSVITRTKPKTKKPNLYRVLLLNDDYTPMEFVIHILE 58 Query: 81 NFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 FF KD E+A IML VH+ G+GECG++ YE+AE KV+QVM+++RQHQ+PLQC+ME+K Sbjct: 59 RFFQKDRESATRIMLHVHNHGVGECGIFTYEVAETKVSQVMDFARQHQHPLQCVMEKK 116 >gi|167647097|ref|YP_001684760.1| ATP-dependent Clp protease adaptor protein ClpS [Caulobacter sp. K31] gi|254763813|sp|B0T2L1|CLPS_CAUSK RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|167349527|gb|ABZ72262.1| ATP-dependent Clp protease adaptor protein ClpS [Caulobacter sp. K31] Length = 109 Score = 170 bits (432), Expect = 4e-41, Method: Composition-based stats. Identities = 53/111 (47%), Positives = 71/111 (63%), Gaps = 3/111 (2%) Query: 27 MADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKD 86 MA+ + G K + P LYRVL++ND+YTPMEFV++VL+ FF K Sbjct: 1 MAERKQ---GGQNNGAGSSVITEVKPKTQKPSLYRVLILNDDYTPMEFVVYVLERFFNKS 57 Query: 87 HETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 E A IML VH G+G CGV+ YE+AE KV QV++ +R+HQ+PLQC ME+ Sbjct: 58 REDATRIMLHVHQHGVGVCGVFTYEVAETKVAQVIDSARRHQHPLQCTMEK 108 >gi|260432448|ref|ZP_05786419.1| ATP-dependent Clp protease adaptor protein ClpS [Silicibacter lacuscaerulensis ITI-1157] gi|260416276|gb|EEX09535.1| ATP-dependent Clp protease adaptor protein ClpS [Silicibacter lacuscaerulensis ITI-1157] Length = 113 Score = 170 bits (432), Expect = 4e-41, Method: Composition-based stats. Identities = 54/112 (48%), Positives = 76/112 (67%) Query: 27 MADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKD 86 M +R G ++ D V+ K + P LY+VLL+ND+YTPMEFV+HVL+ FF Sbjct: 1 MLTARWMMAGKSDDDGDTSILVQTKPKTKRPPLYKVLLLNDDYTPMEFVVHVLERFFGMS 60 Query: 87 HETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 H A IML VH +G+ GV+++EIAE KV QVM+++R+HQ+PLQC ME++ Sbjct: 61 HAQAFEIMLTVHKKGVAVVGVFSHEIAETKVGQVMDFARRHQHPLQCTMERE 112 >gi|288957528|ref|YP_003447869.1| ATP-dependent Clp protease adaptor protein [Azospirillum sp. B510] gi|288909836|dbj|BAI71325.1| ATP-dependent Clp protease adaptor protein [Azospirillum sp. B510] Length = 108 Score = 170 bits (432), Expect = 4e-41, Method: Composition-based stats. Identities = 54/111 (48%), Positives = 73/111 (65%), Gaps = 4/111 (3%) Query: 27 MADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKD 86 MADS V+ K + P +Y+VL++ND+YTPMEFV+ VL+ FF K Sbjct: 1 MADSDKRGNDGTNSGVV----VKAKPKTKKPSMYKVLMLNDDYTPMEFVVLVLERFFSKS 56 Query: 87 HETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 E A IML VH +G+G CGV+ YE+AE KV QVM+++RQHQ+PLQC +E+ Sbjct: 57 REEATQIMLHVHRRGVGLCGVFTYEVAETKVTQVMDFARQHQHPLQCTLEK 107 >gi|163760870|ref|ZP_02167949.1| ATP-dependent Clp protease adaptor protein ClpS [Hoeflea phototrophica DFL-43] gi|162281914|gb|EDQ32206.1| ATP-dependent Clp protease adaptor protein ClpS [Hoeflea phototrophica DFL-43] Length = 122 Score = 170 bits (431), Expect = 6e-41, Method: Composition-based stats. Identities = 58/106 (54%), Positives = 75/106 (70%) Query: 33 NKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKC 92 K G D R +V+ P LYRVLL+ND+YTPMEFVIHVL+ FF KD + A Sbjct: 17 KKTGDGGSDRGTSVITRTKPQVKKPSLYRVLLLNDDYTPMEFVIHVLERFFQKDRDQATR 76 Query: 93 IMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 IML VH+ G+GECGV+ YE+AE KV QVM+++R + +PLQC+ME+K Sbjct: 77 IMLHVHNHGVGECGVFTYEVAETKVTQVMDFARTNHHPLQCVMEKK 122 >gi|150396335|ref|YP_001326802.1| ATP-dependent Clp protease adaptor protein ClpS [Sinorhizobium medicae WSM419] gi|150027850|gb|ABR59967.1| ATP-dependent Clp protease adaptor protein ClpS [Sinorhizobium medicae WSM419] Length = 117 Score = 170 bits (431), Expect = 7e-41, Method: Composition-based stats. Identities = 60/118 (50%), Positives = 78/118 (66%), Gaps = 2/118 (1%) Query: 21 LMSFIFMADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQ 80 + + M G + R K + P LYRVLL+ND+YTPMEFVIH+L+ Sbjct: 2 IAMPVRMQQGSDGNGGGPNRGTSV--ITRTKPKTKKPSLYRVLLLNDDYTPMEFVIHILE 59 Query: 81 NFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 FF KD E A IML VH+ G+GECGV+ YE+AE KV QVM+++RQHQ+PLQC+ME+K Sbjct: 60 RFFQKDREEATTIMLHVHNHGVGECGVFTYEVAETKVTQVMDFARQHQHPLQCVMEKK 117 >gi|209964988|ref|YP_002297903.1| ATP-dependent Clp protease adaptor protein ClpS,putative [Rhodospirillum centenum SW] gi|259491250|sp|B6INJ3|CLPS_RHOCS RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|209958454|gb|ACI99090.1| ATP-dependent Clp protease adaptor protein ClpS,putative [Rhodospirillum centenum SW] Length = 108 Score = 169 bits (430), Expect = 7e-41, Method: Composition-based stats. Identities = 55/111 (49%), Positives = 77/111 (69%), Gaps = 4/111 (3%) Query: 27 MADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKD 86 MADS + + V+ K + P +Y+VL++ND+YTPMEFV+HVL+ FF K+ Sbjct: 1 MADSDKHG----DEGPSTGVVVKAKPKTKKPSMYKVLMLNDDYTPMEFVVHVLERFFNKN 56 Query: 87 HETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 E A IML VH +G+G CGV+ YE+AE KV QVM+++RQHQ+PLQC +E+ Sbjct: 57 REEATRIMLHVHRRGVGVCGVFTYEVAETKVTQVMDFARQHQHPLQCTLEK 107 >gi|149186435|ref|ZP_01864748.1| hypothetical protein ED21_23138 [Erythrobacter sp. SD-21] gi|148830024|gb|EDL48462.1| hypothetical protein ED21_23138 [Erythrobacter sp. SD-21] Length = 121 Score = 169 bits (430), Expect = 9e-41, Method: Composition-based stats. Identities = 50/105 (47%), Positives = 72/105 (68%) Query: 33 NKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKC 92 E D + + +K + P Y+VLL+ND+YTPMEFV+ VL+ FF D E A Sbjct: 16 GDDDRREGDGQVAIATKTRAKPKKPSQYKVLLLNDDYTPMEFVVIVLKRFFRMDMEEATR 75 Query: 93 IMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +ML VH +G+G CG++ YE+AE KVNQVM+++RQ+Q+PLQC +E+ Sbjct: 76 VMLHVHQKGVGVCGIFPYEVAETKVNQVMDFARQNQHPLQCTLEK 120 >gi|329851348|ref|ZP_08266105.1| ATP-dependent Clp protease adaptor protein ClpS family protein [Asticcacaulis biprosthecum C19] gi|328840194|gb|EGF89766.1| ATP-dependent Clp protease adaptor protein ClpS family protein [Asticcacaulis biprosthecum C19] Length = 161 Score = 169 bits (429), Expect = 9e-41, Method: Composition-based stats. Identities = 52/105 (49%), Positives = 68/105 (64%) Query: 33 NKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKC 92 + V K + P LYRVL++ND+YTPMEFV++VL+ FF K E A Sbjct: 56 KGTAGTRPAGSPLAVVETKPKPQKPSLYRVLILNDDYTPMEFVVYVLERFFNKSREDATR 115 Query: 93 IMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 IML VH G+G CGVY YE+AE KV QV++ +R+HQ+PLQC ME+ Sbjct: 116 IMLHVHQTGVGVCGVYTYEVAETKVAQVVDMARRHQHPLQCTMEK 160 >gi|298291485|ref|YP_003693424.1| ATP-dependent Clp protease adaptor protein ClpS [Starkeya novella DSM 506] gi|296927996|gb|ADH88805.1| ATP-dependent Clp protease adaptor protein ClpS [Starkeya novella DSM 506] Length = 123 Score = 169 bits (429), Expect = 9e-41, Method: Composition-based stats. Identities = 61/121 (50%), Positives = 83/121 (68%), Gaps = 2/121 (1%) Query: 18 ILALMSFIFMADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIH 77 + + MAD ++G + R +V+ P LYRVLL+ND+YTPMEFV+H Sbjct: 5 VTSQFREAMMADEERRRRGDNAPGTAV--ITRTKPQVKRPSLYRVLLLNDDYTPMEFVVH 62 Query: 78 VLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 VL++FF K+ E A IML VH G+GECGVY YE+AE KV QVM+++R+HQ+PLQC+ME+ Sbjct: 63 VLEHFFTKNREEATQIMLHVHQHGVGECGVYTYEVAETKVTQVMDFARKHQHPLQCVMEK 122 Query: 138 K 138 K Sbjct: 123 K 123 >gi|227821888|ref|YP_002825858.1| ATP-dependent Clp protease adaptor protein ClpS [Sinorhizobium fredii NGR234] gi|227340887|gb|ACP25105.1| ATP-dependent Clp protease adaptor protein ClpS 1 [Sinorhizobium fredii NGR234] Length = 117 Score = 169 bits (429), Expect = 1e-40, Method: Composition-based stats. Identities = 61/120 (50%), Positives = 81/120 (67%), Gaps = 3/120 (2%) Query: 19 LALMSFIFMADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHV 78 + M S N G + + + R K + P LYRVLL+ND+YTPMEFV+H+ Sbjct: 1 MIAMPVRMQQGSEGNGGGPSRGTSVI---TRTKPKTKKPSLYRVLLLNDDYTPMEFVVHI 57 Query: 79 LQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 L+ FF KD E A IML VH+ G+GECGV+ YE+AE KV QVM+++RQHQ+PLQC+ME+K Sbjct: 58 LERFFQKDREQATVIMLHVHNHGVGECGVFTYEVAETKVTQVMDFARQHQHPLQCVMEKK 117 >gi|261752476|ref|ZP_05996185.1| ATP-dependent Clp protease adapter protein clpS [Brucella suis bv. 5 str. 513] gi|261742229|gb|EEY30155.1| ATP-dependent Clp protease adapter protein clpS [Brucella suis bv. 5 str. 513] Length = 109 Score = 169 bits (429), Expect = 1e-40, Method: Composition-based stats. Identities = 57/106 (53%), Positives = 77/106 (72%) Query: 33 NKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKC 92 G ++ R K R P LYRVLL+ND+YTPMEFV+HVLQ FF K+ + A Sbjct: 4 KTNGGNGPESGTVVVTRTQPKTRKPSLYRVLLLNDDYTPMEFVVHVLQRFFQKNLDDATR 63 Query: 93 IMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 IML VH+ G+GECG++ YE+AE KV+QVM+++RQ+Q+PLQC+ME+K Sbjct: 64 IMLHVHNHGVGECGMFTYEVAETKVSQVMDFARQNQHPLQCVMEKK 109 >gi|15965239|ref|NP_385592.1| ATP-dependent Clp protease adaptor protein ClpS [Sinorhizobium meliloti 1021] gi|307309262|ref|ZP_07588930.1| ATP-dependent Clp protease adaptor protein ClpS [Sinorhizobium meliloti BL225C] gi|307317004|ref|ZP_07596445.1| ATP-dependent Clp protease adaptor protein ClpS [Sinorhizobium meliloti AK83] gi|21542320|sp|Q92Q63|CLPS1_RHIME RecName: Full=ATP-dependent Clp protease adapter protein ClpS 1 gi|15074419|emb|CAC46065.1| Putative ATP-dependent Clp protease adapter protein clpS 1 [Sinorhizobium meliloti 1021] gi|306897092|gb|EFN27837.1| ATP-dependent Clp protease adaptor protein ClpS [Sinorhizobium meliloti AK83] gi|306900263|gb|EFN30880.1| ATP-dependent Clp protease adaptor protein ClpS [Sinorhizobium meliloti BL225C] Length = 117 Score = 169 bits (429), Expect = 1e-40, Method: Composition-based stats. Identities = 59/118 (50%), Positives = 78/118 (66%), Gaps = 2/118 (1%) Query: 21 LMSFIFMADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQ 80 + + M G + R K + P LYRVLL+ND+YTPMEFVIH+L+ Sbjct: 2 IAMPVRMQQGSEGDGGGPSRGTSV--ITRTKPKTKKPSLYRVLLLNDDYTPMEFVIHILE 59 Query: 81 NFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 FF K+ E A IML VH+ G+GECGV+ YE+AE KV QVM+++RQHQ+PLQC+ME+K Sbjct: 60 RFFQKNREEATVIMLHVHNHGVGECGVFTYEVAETKVTQVMDFARQHQHPLQCVMEKK 117 >gi|260426993|ref|ZP_05780972.1| ATP-dependent Clp protease adapter protein ClpS [Citreicella sp. SE45] gi|260421485|gb|EEX14736.1| ATP-dependent Clp protease adapter protein ClpS [Citreicella sp. SE45] Length = 120 Score = 169 bits (429), Expect = 1e-40, Method: Composition-based stats. Identities = 54/113 (47%), Positives = 74/113 (65%), Gaps = 1/113 (0%) Query: 27 MADSRMNKKGIAEFDNC-LDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYK 85 M N + D D V+ K + P LY+VLL+ND+YTPMEFV+HVL+ FF Sbjct: 8 MPIRLANTPSFDDGDGSDADVVVQTKPKTKRPPLYKVLLLNDDYTPMEFVVHVLERFFGM 67 Query: 86 DHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 H A IML VH +G+ GV+++EIAE KV QVM+++R+HQ+PLQC ME++ Sbjct: 68 SHAQAFEIMLTVHKKGVAVVGVFSHEIAETKVGQVMDFARRHQHPLQCTMEKE 120 >gi|254701912|ref|ZP_05163740.1| ATP-dependent Clp protease adaptor protein ClpS [Brucella suis bv. 5 str. 513] Length = 116 Score = 169 bits (429), Expect = 1e-40, Method: Composition-based stats. Identities = 57/106 (53%), Positives = 77/106 (72%) Query: 33 NKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKC 92 G ++ R K R P LYRVLL+ND+YTPMEFV+HVLQ FF K+ + A Sbjct: 11 KTNGGNGPESGTVVVTRTQPKTRKPSLYRVLLLNDDYTPMEFVVHVLQRFFQKNLDDATR 70 Query: 93 IMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 IML VH+ G+GECG++ YE+AE KV+QVM+++RQ+Q+PLQC+ME+K Sbjct: 71 IMLHVHNHGVGECGMFTYEVAETKVSQVMDFARQNQHPLQCVMEKK 116 >gi|218533142|ref|YP_002423958.1| ATP-dependent Clp protease adaptor protein ClpS [Methylobacterium chloromethanicum CM4] gi|218525445|gb|ACK86030.1| ATP-dependent Clp protease adaptor protein ClpS [Methylobacterium chloromethanicum CM4] Length = 131 Score = 169 bits (428), Expect = 1e-40, Method: Composition-based stats. Identities = 57/128 (44%), Positives = 81/128 (63%), Gaps = 7/128 (5%) Query: 11 HRVKRDGILALMSFIFMADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYT 70 R + + + ++ G A R + + P LYRVLL+ND+YT Sbjct: 11 QEAGRGRVPVRAASTPRSPGDDDRSGTA-------IITRTKPRAKRPSLYRVLLLNDDYT 63 Query: 71 PMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYP 130 PMEFV+HV++ FF K H+ A IM+ VHH G+GECGV+ YE+AE KV QVM+++R+HQ+P Sbjct: 64 PMEFVVHVVERFFNKSHDDAYQIMMHVHHNGVGECGVFTYEVAETKVTQVMDFARKHQHP 123 Query: 131 LQCIMEQK 138 LQC+ME+K Sbjct: 124 LQCVMEKK 131 >gi|222085850|ref|YP_002544381.1| ATP-dependent Clp protease adaptor protein [Agrobacterium radiobacter K84] gi|221723298|gb|ACM26454.1| ATP-dependent Clp protease adaptor protein [Agrobacterium radiobacter K84] Length = 117 Score = 169 bits (428), Expect = 1e-40, Method: Composition-based stats. Identities = 59/118 (50%), Positives = 84/118 (71%), Gaps = 2/118 (1%) Query: 21 LMSFIFMADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQ 80 + I M + +++ + R +K + P LYRVLL+ND+YTPMEFVIH+L+ Sbjct: 2 IAEPIRM--QKDSERNGDNGNRGTSVITRTKAKTKKPNLYRVLLLNDDYTPMEFVIHILE 59 Query: 81 NFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 FF KD E+A IML VH+ G+GECG++ YE+AE KV+QVM+++RQHQ+PLQC+ME+K Sbjct: 60 RFFQKDLESATRIMLHVHNHGVGECGIFTYEVAETKVSQVMDFARQHQHPLQCVMEKK 117 >gi|103485996|ref|YP_615557.1| ATP-dependent Clp protease adaptor protein ClpS [Sphingopyxis alaskensis RB2256] gi|98976073|gb|ABF52224.1| ATP-dependent Clp protease adaptor protein ClpS [Sphingopyxis alaskensis RB2256] Length = 121 Score = 169 bits (428), Expect = 1e-40, Method: Composition-based stats. Identities = 56/111 (50%), Positives = 76/111 (68%), Gaps = 4/111 (3%) Query: 27 MADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKD 86 MAD + G + R +K + P +Y+VLL+ND+YTPMEFV+ VLQ FF D Sbjct: 14 MADKDDDATGTP----GVGIATRTRAKPKKPSMYKVLLLNDDYTPMEFVVMVLQRFFNMD 69 Query: 87 HETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 E A +ML VH QG+G CGV++YE+AE KVNQVM+ +RQ+Q+PLQC +E+ Sbjct: 70 IERATQVMLHVHQQGVGVCGVFSYEVAETKVNQVMDAARQNQHPLQCTLEK 120 >gi|39936211|ref|NP_948487.1| ATP-dependent Clp protease adaptor protein ClpS [Rhodopseudomonas palustris CGA009] gi|39650066|emb|CAE28589.1| DUF174 [Rhodopseudomonas palustris CGA009] Length = 132 Score = 168 bits (427), Expect = 2e-40, Method: Composition-based stats. Identities = 60/131 (45%), Positives = 83/131 (63%), Gaps = 3/131 (2%) Query: 8 SMYHRVKRDGILALMSFIFMADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVND 67 S+ H + + MA + G + + + + + P LYRVL++ND Sbjct: 5 SLSHSAAGQAGDRINRPLAMAGDG-GRSGPSTPSTSV--ITKTKPRTKRPNLYRVLILND 61 Query: 68 NYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQH 127 +YTPMEFV+HVL+ FF D E A +ML VHH GIGECGV+ YEIAE KV QVM+++R+H Sbjct: 62 DYTPMEFVVHVLEKFFQMDVEAATKVMLHVHHHGIGECGVFTYEIAETKVTQVMDFARKH 121 Query: 128 QYPLQCIMEQK 138 Q+PLQC+ME+K Sbjct: 122 QHPLQCVMEKK 132 >gi|75675888|ref|YP_318309.1| ATP-dependent Clp protease adaptor protein ClpS [Nitrobacter winogradskyi Nb-255] gi|74420758|gb|ABA04957.1| ATP-dependent Clp protease adaptor protein ClpS [Nitrobacter winogradskyi Nb-255] Length = 136 Score = 168 bits (427), Expect = 2e-40, Method: Composition-based stats. Identities = 60/113 (53%), Positives = 80/113 (70%), Gaps = 1/113 (0%) Query: 26 FMADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYK 85 M++ + G D + +K + P LYRVL++ND+YTPMEFV+HVL+ FF K Sbjct: 25 RMSEDEDDHAG-GRGDPAASVITKVRTKTKRPNLYRVLILNDDYTPMEFVVHVLEKFFQK 83 Query: 86 DHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 D E A IML VHH GIGECGV+ YE+AE KV QVM+++R+HQ+PLQC+ME+K Sbjct: 84 DLEAATQIMLHVHHHGIGECGVFTYEVAETKVTQVMDFARKHQHPLQCVMEKK 136 >gi|163797886|ref|ZP_02191830.1| ATP-dependent Clp protease adaptor protein clpS [alpha proteobacterium BAL199] gi|159176848|gb|EDP61416.1| ATP-dependent Clp protease adaptor protein clpS [alpha proteobacterium BAL199] Length = 108 Score = 168 bits (427), Expect = 2e-40, Method: Composition-based stats. Identities = 52/111 (46%), Positives = 74/111 (66%), Gaps = 4/111 (3%) Query: 27 MADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKD 86 M+D G V+ K + P +Y+V+++ND+YTPMEFV+H+++ FF K Sbjct: 1 MSDDERGTGGRP----TTGVVVKTRPKTKKPSMYKVIMLNDDYTPMEFVVHIIERFFAKS 56 Query: 87 HETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 E A IML VH +G+G CGVY YE+AE KV QVM+++RQHQ+PLQC +E+ Sbjct: 57 REEATQIMLHVHQRGVGICGVYTYEVAETKVTQVMDFARQHQHPLQCTLEK 107 >gi|116251968|ref|YP_767806.1| ATP-dependent Clp protease adaptor protein ClpS [Rhizobium leguminosarum bv. viciae 3841] gi|115256616|emb|CAK07704.1| putative ATP-dependent CLP protease adaptor protein [Rhizobium leguminosarum bv. viciae 3841] Length = 109 Score = 168 bits (427), Expect = 2e-40, Method: Composition-based stats. Identities = 60/109 (55%), Positives = 79/109 (72%), Gaps = 2/109 (1%) Query: 32 MNKKGIAEFDNCLDSE--VRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHET 89 M DN + R K + P LYRVLL+ND+YTPMEFVIH+L+ FF KD E+ Sbjct: 1 MQNDSERNGDNANRTSVITRTKPKTKKPNLYRVLLLNDDYTPMEFVIHILERFFQKDRES 60 Query: 90 AKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 A IML VH+ G+GECG++ YE+AE KV+QVM+++RQHQ+PLQC+ME+K Sbjct: 61 ATRIMLHVHNHGVGECGIFTYEVAETKVSQVMDFARQHQHPLQCVMEKK 109 >gi|110633725|ref|YP_673933.1| ATP-dependent Clp protease adaptor protein ClpS [Mesorhizobium sp. BNC1] gi|110284709|gb|ABG62768.1| ATP-dependent Clp protease adaptor protein ClpS [Chelativorans sp. BNC1] Length = 133 Score = 168 bits (427), Expect = 2e-40, Method: Composition-based stats. Identities = 57/106 (53%), Positives = 75/106 (70%) Query: 33 NKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKC 92 R +K + P LYRVLL+ND+YTPMEFV+HVL+ FF KD E A Sbjct: 28 GDDEGNSTGRGTAVITRTRTKTKKPSLYRVLLLNDDYTPMEFVVHVLERFFQKDREAATM 87 Query: 93 IMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 IML VH+ G+GECG+Y +E+AE KV+QVM+++RQHQ+PLQC+ME+K Sbjct: 88 IMLHVHNHGVGECGIYTFEVAETKVSQVMDFARQHQHPLQCVMEKK 133 >gi|154248457|ref|YP_001419415.1| ATP-dependent Clp protease adaptor protein ClpS [Xanthobacter autotrophicus Py2] gi|154162542|gb|ABS69758.1| ATP-dependent Clp protease adaptor protein ClpS [Xanthobacter autotrophicus Py2] Length = 124 Score = 168 bits (427), Expect = 2e-40, Method: Composition-based stats. Identities = 58/123 (47%), Positives = 80/123 (65%), Gaps = 2/123 (1%) Query: 16 DGILALMSFIFMADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFV 75 I + ++G + S R + + P LYRVLL+ND+YTPMEFV Sbjct: 4 ISISTFQAPALAGPDTPPRRGGDGPGTAVIS--RTKPQTKRPSLYRVLLLNDDYTPMEFV 61 Query: 76 IHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIM 135 +HVL+ FF KD + A IML VH+ G+GECGV+ YE+AE KV QVM+++R+HQ+PLQC+M Sbjct: 62 VHVLERFFNKDRDQANTIMLHVHNHGVGECGVFTYEVAETKVTQVMDFARKHQHPLQCVM 121 Query: 136 EQK 138 E+K Sbjct: 122 EKK 124 >gi|241204496|ref|YP_002975592.1| ATP-dependent Clp protease adaptor protein ClpS [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240858386|gb|ACS56053.1| ATP-dependent Clp protease adaptor protein ClpS [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 118 Score = 168 bits (427), Expect = 2e-40, Method: Composition-based stats. Identities = 61/110 (55%), Positives = 80/110 (72%), Gaps = 2/110 (1%) Query: 31 RMNKKGIAEFDNCLDSE--VRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHE 88 RM DN + R K + P LYRVLL+ND+YTPMEFVIH+L+ FF KD E Sbjct: 9 RMQNDSERNGDNANRTSVITRTKPKTKKPNLYRVLLLNDDYTPMEFVIHILERFFQKDRE 68 Query: 89 TAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 +A IML VH+ G+GECG++ YE+AE KV+QVM+++RQHQ+PLQC+ME+K Sbjct: 69 SATRIMLHVHNHGVGECGIFTYEVAETKVSQVMDFARQHQHPLQCVMEKK 118 >gi|315498280|ref|YP_004087084.1| ATP-dependent clp protease adaptor protein clps [Asticcacaulis excentricus CB 48] gi|315416292|gb|ADU12933.1| ATP-dependent Clp protease adaptor protein ClpS [Asticcacaulis excentricus CB 48] Length = 132 Score = 168 bits (426), Expect = 2e-40, Method: Composition-based stats. Identities = 55/122 (45%), Positives = 77/122 (63%), Gaps = 3/122 (2%) Query: 19 LALMSFIFMADSRMNKKGIAEFDNCLDS---EVRFSSKVRVPKLYRVLLVNDNYTPMEFV 75 L + + +R K + + D ++ + K P LYRVL++ND+YTPMEFV Sbjct: 10 PPLSAVSPVEAARAPKAPVTDVDKPANAPFAVIDAKPKAAKPSLYRVLILNDDYTPMEFV 69 Query: 76 IHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIM 135 ++VL+ FF K E A IML VH G+G CGVY YE+AE KV QV++ +R+HQ+PLQC M Sbjct: 70 VYVLERFFNKSREDATRIMLHVHQTGVGVCGVYTYEVAETKVAQVVDMARRHQHPLQCTM 129 Query: 136 EQ 137 E+ Sbjct: 130 EK 131 >gi|158423218|ref|YP_001524510.1| ATP-dependent Clp protease adaptor protein [Azorhizobium caulinodans ORS 571] gi|158330107|dbj|BAF87592.1| ATP-dependent Clp protease adaptor protein [Azorhizobium caulinodans ORS 571] Length = 131 Score = 168 bits (426), Expect = 2e-40, Method: Composition-based stats. Identities = 59/111 (53%), Positives = 78/111 (70%), Gaps = 2/111 (1%) Query: 28 ADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDH 87 D ++G + R +V+ P LYRVLL+ND+YTPM+FV+HVL+ FF K Sbjct: 23 GDDDKQRRGPGGPGTAV--ITRTKPQVKRPNLYRVLLLNDDYTPMDFVVHVLERFFSKSR 80 Query: 88 ETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 E A IML VHH G+GECGVY YE+AE KV QVM+++R+HQ+PLQC+ME+K Sbjct: 81 EEANTIMLHVHHHGVGECGVYTYEVAETKVTQVMDFARKHQHPLQCVMEKK 131 >gi|27380265|ref|NP_771794.1| ATP-dependent Clp protease adaptor protein ClpS [Bradyrhizobium japonicum USDA 110] gi|27353429|dbj|BAC50419.1| yljA [Bradyrhizobium japonicum USDA 110] Length = 130 Score = 168 bits (426), Expect = 3e-40, Method: Composition-based stats. Identities = 62/113 (54%), Positives = 80/113 (70%), Gaps = 2/113 (1%) Query: 26 FMADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYK 85 M++ N+ G N + K + P LYRVL++ND+YTPMEFV+HVL+ FF K Sbjct: 20 RMSNDE-NRSGSPTGPNT-SVITKVKPKTKRPNLYRVLILNDDYTPMEFVVHVLEKFFQK 77 Query: 86 DHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 D E A IML VHH GIGECGV+ YEIAE KV QVM+++R+HQ+PLQC+ME+K Sbjct: 78 DVEAATKIMLHVHHHGIGECGVFTYEIAETKVTQVMDFARKHQHPLQCVMEKK 130 >gi|254294360|ref|YP_003060383.1| ATP-dependent Clp protease adaptor protein ClpS [Hirschia baltica ATCC 49814] gi|254042891|gb|ACT59686.1| ATP-dependent Clp protease adaptor protein ClpS [Hirschia baltica ATCC 49814] Length = 109 Score = 168 bits (426), Expect = 3e-40, Method: Composition-based stats. Identities = 48/108 (44%), Positives = 72/108 (66%) Query: 31 RMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETA 90 + D+ R +K + P LYRVL++ND++TPMEFV+ +L++FF K E A Sbjct: 1 MSDDNTPTGPDDETGVATRTETKTKRPSLYRVLILNDDFTPMEFVVLILEHFFNKTREEA 60 Query: 91 KCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 +ML VH+ G+G CGV+ YE+AE KV QVM+ +R+ ++PLQC ME++ Sbjct: 61 TKVMLHVHNTGVGVCGVFTYEVAETKVAQVMDLARRSEHPLQCTMERE 108 >gi|146341455|ref|YP_001206503.1| ATP-dependent Clp protease adaptor protein ClpS, modulator of ClpA substrate specificity [Bradyrhizobium sp. ORS278] gi|146194261|emb|CAL78283.1| ATP-dependent Clp protease adaptor protein ClpS, modulator of ClpA substrate specificity [Bradyrhizobium sp. ORS278] Length = 110 Score = 168 bits (425), Expect = 3e-40, Method: Composition-based stats. Identities = 59/110 (53%), Positives = 76/110 (69%), Gaps = 4/110 (3%) Query: 29 DSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHE 88 D++ G + K + P LYRVL++ND+YTPMEFV+ VL+ FF KD E Sbjct: 5 DNKSGGPGGP----ATSVITKVKPKTKRPNLYRVLILNDDYTPMEFVVLVLEKFFNKDVE 60 Query: 89 TAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 A IML VHH GIGECGV+ YEIAE KV QVM+++R+HQ+PLQC+ME+K Sbjct: 61 AATKIMLHVHHHGIGECGVFTYEIAETKVTQVMDFARKHQHPLQCVMEKK 110 >gi|88703373|ref|ZP_01101089.1| ATP-dependent Clp protease adaptor protein ClpS [Congregibacter litoralis KT71] gi|88702087|gb|EAQ99190.1| ATP-dependent Clp protease adaptor protein ClpS [Congregibacter litoralis KT71] Length = 169 Score = 168 bits (425), Expect = 3e-40, Method: Composition-based stats. Identities = 51/130 (39%), Positives = 71/130 (54%), Gaps = 12/130 (9%) Query: 7 GSMYHRVKRDGILALMSFIFMADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVN 66 G+ HR + M+ + + G + L KV+ P LY+V+L+N Sbjct: 48 GANAHRAR---------PWLMSADKNEEHGGDDGGLALQ---EAKPKVKRPPLYKVVLLN 95 Query: 67 DNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQ 126 D+YTPMEFV+ +L+ FF + E A IML VH G G CG+Y +IAE K QV Y+R Sbjct: 96 DDYTPMEFVVEILEVFFKMNREQATQIMLTVHTHGKGVCGIYTKDIAETKSAQVNQYARD 155 Query: 127 HQYPLQCIME 136 HQ+PL C +E Sbjct: 156 HQHPLLCEIE 165 >gi|316933620|ref|YP_004108602.1| ATP-dependent Clp protease adaptor protein ClpS [Rhodopseudomonas palustris DX-1] gi|315601334|gb|ADU43869.1| ATP-dependent Clp protease adaptor protein ClpS [Rhodopseudomonas palustris DX-1] Length = 132 Score = 168 bits (425), Expect = 3e-40, Method: Composition-based stats. Identities = 60/131 (45%), Positives = 81/131 (61%), Gaps = 3/131 (2%) Query: 8 SMYHRVKRDGILALMSFIFMADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVND 67 S+ H + MA + G + + + + P LYRVL++ND Sbjct: 5 SLSHLAAGTAGDPTTRPMAMAGEG-GRSGPNTPSTSV--ITKTKPRTKRPSLYRVLILND 61 Query: 68 NYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQH 127 +YTPMEFV+HVL+ FF D E A +ML VHH GIGECGV+ YEIAE KV QVM+++R+H Sbjct: 62 DYTPMEFVVHVLEKFFQMDVEAATQVMLHVHHHGIGECGVFTYEIAETKVTQVMDFARKH 121 Query: 128 QYPLQCIMEQK 138 Q+PLQC+ME+K Sbjct: 122 QHPLQCVMEKK 132 >gi|85716350|ref|ZP_01047323.1| ATP-dependent Clp protease adaptor protein ClpS [Nitrobacter sp. Nb-311A] gi|85696866|gb|EAQ34751.1| ATP-dependent Clp protease adaptor protein ClpS [Nitrobacter sp. Nb-311A] Length = 110 Score = 167 bits (424), Expect = 4e-40, Method: Composition-based stats. Identities = 59/109 (54%), Positives = 77/109 (70%) Query: 30 SRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHET 89 S + + D + K + P LYRVL++ND+YTPMEFV+HVL+ FF KD E Sbjct: 2 SEDDDRAGGRGDPAASVITKVRPKTKRPNLYRVLILNDDYTPMEFVVHVLEKFFQKDLEA 61 Query: 90 AKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 A IML VHH GIGECGV+ YE+AE KV QVM+++R+HQ+PLQC+ME+K Sbjct: 62 ATQIMLHVHHHGIGECGVFTYEVAETKVTQVMDFARKHQHPLQCVMEKK 110 >gi|148256120|ref|YP_001240705.1| ATP-dependent Clp protease adaptor protein ClpS, modulator of ClpA substrate specificity [Bradyrhizobium sp. BTAi1] gi|146408293|gb|ABQ36799.1| ATP-dependent Clp protease adaptor protein ClpS, modulator of ClpA substrate specificity [Bradyrhizobium sp. BTAi1] Length = 110 Score = 167 bits (424), Expect = 4e-40, Method: Composition-based stats. Identities = 60/112 (53%), Positives = 79/112 (70%), Gaps = 2/112 (1%) Query: 27 MADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKD 86 M+++ G + + K + P LYRVL++ND+YTPMEFV+HVL+ FF KD Sbjct: 1 MSNNDNKSGGTGGPVTSV--ITKVKPKTKRPNLYRVLILNDDYTPMEFVVHVLEKFFNKD 58 Query: 87 HETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 E A IML VHH GIGECGV+ YEIAE KV QVM+++R+HQ+PLQC+ME+K Sbjct: 59 VEAATKIMLHVHHHGIGECGVFTYEIAETKVTQVMDFARKHQHPLQCVMEKK 110 >gi|302382575|ref|YP_003818398.1| ATP-dependent Clp protease adaptor protein ClpS [Brevundimonas subvibrioides ATCC 15264] gi|302193203|gb|ADL00775.1| ATP-dependent Clp protease adaptor protein ClpS [Brevundimonas subvibrioides ATCC 15264] Length = 110 Score = 167 bits (424), Expect = 4e-40, Method: Composition-based stats. Identities = 52/111 (46%), Positives = 71/111 (63%), Gaps = 2/111 (1%) Query: 27 MADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKD 86 M R ++ + K++ P LYRVL++ND+YTPMEFV++VL+ FF K Sbjct: 1 MPTRRPGEQNGG--GQGAATITETKPKLQKPSLYRVLILNDDYTPMEFVVYVLERFFQKS 58 Query: 87 HETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 E A IML VH G+G CGV+ YE+AE KV QV+ +R+HQ+PLQC ME+ Sbjct: 59 REDATRIMLHVHQHGVGVCGVFTYEVAETKVAQVVETARRHQHPLQCTMEK 109 >gi|188584527|ref|YP_001927972.1| ATP-dependent Clp protease adaptor protein ClpS [Methylobacterium populi BJ001] gi|179348025|gb|ACB83437.1| ATP-dependent Clp protease adaptor protein ClpS [Methylobacterium populi BJ001] Length = 131 Score = 167 bits (423), Expect = 5e-40, Method: Composition-based stats. Identities = 58/128 (45%), Positives = 80/128 (62%), Gaps = 7/128 (5%) Query: 11 HRVKRDGILALMSFIFMADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYT 70 R + + ++ G A R + + P LYRVLL+ND+YT Sbjct: 11 QEAVRGRVPVRAASTPRNPGDDDRSGTA-------IITRTKPRAKRPSLYRVLLLNDDYT 63 Query: 71 PMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYP 130 PMEFV+HV++ FF K HE A IM+ VHH G+GECGV+ YE+AE KV QVM+++R+HQ+P Sbjct: 64 PMEFVVHVVERFFNKSHEDAYQIMMHVHHNGVGECGVFTYEVAETKVTQVMDFARKHQHP 123 Query: 131 LQCIMEQK 138 LQC+ME+K Sbjct: 124 LQCVMEKK 131 >gi|220935008|ref|YP_002513907.1| ATP-dependent Clp protease adaptor protein ClpS [Thioalkalivibrio sp. HL-EbGR7] gi|219996318|gb|ACL72920.1| ATP-dependent Clp protease adaptor protein ClpS [Thioalkalivibrio sp. HL-EbGR7] Length = 106 Score = 167 bits (423), Expect = 5e-40, Method: Composition-based stats. Identities = 53/106 (50%), Positives = 70/106 (66%), Gaps = 1/106 (0%) Query: 32 MNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAK 91 M ++ D L E K++ P Y+V+L+ND+YTPMEFV+ VL++FF D E A Sbjct: 1 MGEERKDTPDRGLAVE-EARPKLKPPPQYQVVLLNDDYTPMEFVVEVLESFFGMDREKAT 59 Query: 92 CIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 IML VH +G G CG+Y +IAE KV QV +Y+RQHQ+PL C MEQ Sbjct: 60 RIMLHVHTRGKGVCGIYPRDIAETKVAQVNDYARQHQHPLLCAMEQ 105 >gi|197104769|ref|YP_002130146.1| hypothetical protein PHZ_c1303 [Phenylobacterium zucineum HLK1] gi|238690132|sp|B4R947|CLPS_PHEZH RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|196478189|gb|ACG77717.1| conserved hypothetical protein [Phenylobacterium zucineum HLK1] Length = 109 Score = 167 bits (423), Expect = 5e-40, Method: Composition-based stats. Identities = 53/111 (47%), Positives = 73/111 (65%), Gaps = 3/111 (2%) Query: 27 MADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKD 86 M++ + G + + K + P +YRVLL+ND+YTPMEFV++VL+ FF K Sbjct: 1 MSERKEGDSGAGVRSAVI---TQTKPKTQKPAMYRVLLLNDDYTPMEFVVYVLEQFFNKS 57 Query: 87 HETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 E A IML VH G+G CGVY YE+AE KV QV++ +R+HQ+PLQC ME+ Sbjct: 58 REDATRIMLHVHQHGVGVCGVYTYEVAETKVAQVVDTARRHQHPLQCTMEK 108 >gi|113969987|ref|YP_733780.1| ATP-dependent Clp protease adaptor protein ClpS [Shewanella sp. MR-4] gi|114047222|ref|YP_737772.1| ATP-dependent Clp protease adaptor protein ClpS [Shewanella sp. MR-7] gi|117920199|ref|YP_869391.1| ATP-dependent Clp protease adaptor protein ClpS [Shewanella sp. ANA-3] gi|123130486|sp|Q0HJP4|CLPS_SHESM RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|123131487|sp|Q0HVZ0|CLPS_SHESR RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|166214747|sp|A0KW16|CLPS_SHESA RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|113884671|gb|ABI38723.1| ATP-dependent Clp protease adaptor protein ClpS [Shewanella sp. MR-4] gi|113888664|gb|ABI42715.1| ATP-dependent Clp protease adaptor protein ClpS [Shewanella sp. MR-7] gi|117612531|gb|ABK47985.1| ATP-dependent Clp protease adaptor protein ClpS [Shewanella sp. ANA-3] Length = 102 Score = 167 bits (423), Expect = 5e-40, Method: Composition-based stats. Identities = 49/101 (48%), Positives = 69/101 (68%) Query: 37 IAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLK 96 + + N E R S++ P +Y+V+L ND+YTPM+FVI VLQ FF K+ + A IML Sbjct: 1 MGKTGNIEHVEERVESELMPPSMYKVILNNDDYTPMDFVIEVLQIFFRKNEQEATDIMLT 60 Query: 97 VHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +HHQG G CG++ Y IAE KV QV ++RQ+Q+PL C +E+ Sbjct: 61 IHHQGKGICGIFPYGIAETKVIQVNQFARQNQHPLLCSLEK 101 >gi|121998183|ref|YP_001002970.1| ATP-dependent Clp protease adaptor protein ClpS [Halorhodospira halophila SL1] gi|158514017|sp|A1WWV6|CLPS_HALHL RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|121589588|gb|ABM62168.1| ATP-dependent Clp protease adaptor protein ClpS [Halorhodospira halophila SL1] Length = 106 Score = 166 bits (422), Expect = 6e-40, Method: Composition-based stats. Identities = 48/104 (46%), Positives = 69/104 (66%), Gaps = 1/104 (0%) Query: 35 KGIAEFDNCLDSEVRF-SSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCI 93 D+ EV ++ P +Y+V+L+ND+YTPM+FV+ VLQ FF KD A I Sbjct: 2 TDEPNQDDPQGPEVEAAKPSLKQPPMYKVVLLNDDYTPMDFVVEVLQRFFNKDRSQATQI 61 Query: 94 MLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 ML VH +G G CGVY+ ++AE KV+QV +Y+R+H++PL C ME+ Sbjct: 62 MLHVHTRGKGVCGVYSRDVAETKVSQVNDYAREHEHPLLCTMEE 105 >gi|254514303|ref|ZP_05126364.1| Sua5/YciO/YrdC/YwlC [gamma proteobacterium NOR5-3] gi|219676546|gb|EED32911.1| Sua5/YciO/YrdC/YwlC [gamma proteobacterium NOR5-3] Length = 134 Score = 166 bits (422), Expect = 6e-40, Method: Composition-based stats. Identities = 43/88 (48%), Positives = 60/88 (68%) Query: 49 RFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVY 108 +++ P LY+V+L+ND+YTPMEFV+ VL+ FF + E A +ML VH QG G CG+Y Sbjct: 43 EAKPQLKRPPLYKVVLLNDDYTPMEFVVEVLEVFFKMNREQATQVMLTVHTQGKGVCGIY 102 Query: 109 AYEIAEMKVNQVMNYSRQHQYPLQCIME 136 +IAE K QV ++R HQ+PL C +E Sbjct: 103 TKDIAETKSAQVNQFARDHQHPLLCEIE 130 >gi|92117938|ref|YP_577667.1| ATP-dependent Clp protease adaptor protein ClpS [Nitrobacter hamburgensis X14] gi|91800832|gb|ABE63207.1| ATP-dependent Clp protease adaptor protein ClpS [Nitrobacter hamburgensis X14] Length = 124 Score = 166 bits (422), Expect = 6e-40, Method: Composition-based stats. Identities = 61/118 (51%), Positives = 77/118 (65%), Gaps = 2/118 (1%) Query: 21 LMSFIFMADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQ 80 M + G D + K + P LYRVL++ND+YTPMEFV+HVL+ Sbjct: 9 SAPAPRMGNDEDRTDG--RGDPAASVITKVKPKTKRPNLYRVLILNDDYTPMEFVVHVLE 66 Query: 81 NFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 FF KD E A IML VHH GIGECGV+ YEIAE KV QVM+++R+HQ+PLQC+ME+K Sbjct: 67 KFFQKDVEAATEIMLHVHHHGIGECGVFTYEIAETKVTQVMDFARKHQHPLQCVMEKK 124 >gi|288941931|ref|YP_003444171.1| ATP-dependent Clp protease adaptor protein ClpS [Allochromatium vinosum DSM 180] gi|288897303|gb|ADC63139.1| ATP-dependent Clp protease adaptor protein ClpS [Allochromatium vinosum DSM 180] Length = 107 Score = 166 bits (422), Expect = 8e-40, Method: Composition-based stats. Identities = 50/106 (47%), Positives = 67/106 (63%) Query: 32 MNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAK 91 M E S K+R P LY+VLL+ND+YTPMEFV+ VL+ FF + E A Sbjct: 1 MTNPRSGEERESGLSVQEARPKLRRPPLYKVLLLNDDYTPMEFVVLVLEIFFGMNREKAT 60 Query: 92 CIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +ML VH +G+G CGV+ +IAE KV QV +Y+R +Q+PL C ME+ Sbjct: 61 QVMLHVHTRGVGVCGVFTKDIAETKVAQVNDYARGNQHPLMCTMEE 106 >gi|254509526|ref|ZP_05121593.1| ATP-dependent Clp protease adaptor protein ClpS [Rhodobacteraceae bacterium KLH11] gi|221533237|gb|EEE36225.1| ATP-dependent Clp protease adaptor protein ClpS [Rhodobacteraceae bacterium KLH11] Length = 113 Score = 166 bits (422), Expect = 8e-40, Method: Composition-based stats. Identities = 52/112 (46%), Positives = 75/112 (66%) Query: 27 MADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKD 86 M + + + D+ V+ K + P LY+VLL+ND+YTPMEFV+HVL+ FF Sbjct: 1 MRNDQWMMSDNPDEDDDTSILVQTRPKTQRPPLYKVLLLNDDYTPMEFVVHVLERFFGMT 60 Query: 87 HETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 H A IML VH +G+ GV+++EIAE KV QVM+++R+HQ+PLQC ME++ Sbjct: 61 HAQAFEIMLTVHKKGVAVVGVFSHEIAETKVGQVMDFARRHQHPLQCTMERE 112 >gi|192360778|ref|YP_001983029.1| ATP-dependent Clp protease adaptor protein ClpS [Cellvibrio japonicus Ueda107] gi|190686943|gb|ACE84621.1| ATP-dependent Clp protease adaptor protein clpS [Cellvibrio japonicus Ueda107] Length = 125 Score = 166 bits (422), Expect = 8e-40, Method: Composition-based stats. Identities = 45/106 (42%), Positives = 64/106 (60%), Gaps = 1/106 (0%) Query: 31 RMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETA 90 + N E D L K++ P +Y+V+L+ND+YTPM+FV+H+L+ FF E A Sbjct: 13 KDNDDSAGESDGGLAVVT-AKPKLKRPSMYKVVLLNDDYTPMDFVVHILETFFSMTREKA 71 Query: 91 KCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIME 136 +ML VH G CG+Y +IAE K QV YSR++Q+PL C +E Sbjct: 72 THVMLTVHVHGKAVCGIYTRDIAETKAAQVNQYSRENQHPLLCEIE 117 >gi|114799620|ref|YP_759751.1| ATP-dependent Clp protease, adaptor protein ClpS [Hyphomonas neptunium ATCC 15444] gi|123028220|sp|Q0C3E2|CLPS_HYPNA RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|114739794|gb|ABI77919.1| ATP-dependent Clp protease, adaptor protein ClpS [Hyphomonas neptunium ATCC 15444] Length = 118 Score = 166 bits (421), Expect = 8e-40, Method: Composition-based stats. Identities = 50/95 (52%), Positives = 69/95 (72%) Query: 44 LDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIG 103 D K + P LYRVLL+ND+YTPMEFV+ +L+ FF + E A IML VH +G+G Sbjct: 23 FDLATETRIKTKKPSLYRVLLLNDDYTPMEFVVFILERFFNRSREQATRIMLHVHQKGVG 82 Query: 104 ECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 CGVY YE+AE KV QV++ +R+H++PLQC+ME++ Sbjct: 83 LCGVYTYEVAETKVAQVLDLARRHEHPLQCVMEKE 117 >gi|260574204|ref|ZP_05842209.1| ATP-dependent Clp protease adaptor protein ClpS [Rhodobacter sp. SW2] gi|259023670|gb|EEW26961.1| ATP-dependent Clp protease adaptor protein ClpS [Rhodobacter sp. SW2] Length = 117 Score = 166 bits (421), Expect = 9e-40, Method: Composition-based stats. Identities = 51/116 (43%), Positives = 78/116 (67%), Gaps = 2/116 (1%) Query: 22 MSFIFMADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQN 81 + + M+ +K G E D + + ++ P LY+VLL+ND+YTPMEFV+H+L+ Sbjct: 3 LRPLQMSGRMSDKPGGTEGDAS--TLTKTHTRTERPPLYKVLLLNDDYTPMEFVVHILER 60 Query: 82 FFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 FF +H A IML VH +G+ GV+++E+AE KV QVM+++R+HQ+PLQC ME+ Sbjct: 61 FFGLNHAQAFEIMLTVHKKGLAVVGVFSFEVAETKVAQVMDFARRHQHPLQCTMEK 116 >gi|114704886|ref|ZP_01437794.1| ATP-dependent Clp protease adaptor protein ClpS [Fulvimarina pelagi HTCC2506] gi|114539671|gb|EAU42791.1| ATP-dependent Clp protease adaptor protein ClpS [Fulvimarina pelagi HTCC2506] Length = 135 Score = 166 bits (421), Expect = 9e-40, Method: Composition-based stats. Identities = 58/120 (48%), Positives = 77/120 (64%), Gaps = 2/120 (1%) Query: 18 ILALMSFIFMADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIH 77 + +++ + R K++ P LYRVLL+ND+YTPMEFVIH Sbjct: 17 APKSAPPFPLVMQGEDEEETRGPGTSV--ITRSKPKLQKPSLYRVLLLNDDYTPMEFVIH 74 Query: 78 VLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 VL+ FF KD E A IML VH G+GECGV+ YE+AE KV QVM+++RQHQ+PLQC+ME+ Sbjct: 75 VLERFFQKDREAATQIMLHVHRHGVGECGVFTYEVAETKVTQVMDFARQHQHPLQCVMEK 134 >gi|58582177|ref|YP_201193.1| ATP-dependent Clp protease adaptor protein ClpS [Xanthomonas oryzae pv. oryzae KACC10331] gi|58426771|gb|AAW75808.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae KACC10331] Length = 126 Score = 166 bits (421), Expect = 1e-39, Method: Composition-based stats. Identities = 53/109 (48%), Positives = 70/109 (64%), Gaps = 1/109 (0%) Query: 29 DSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHE 88 + RM + E D+ L E +V P Y+VLL+ND+YTPM+FV+ VL+ FF + E Sbjct: 18 NGRMPRNTSHEHDHGLMVE-ASKPEVAPPPRYQVLLLNDDYTPMDFVVTVLEQFFNLNLE 76 Query: 89 TAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 A IML VH +G G CGVY+ E+AE KV QV +SR +Q+PL C MEQ Sbjct: 77 QATQIMLHVHTRGRGVCGVYSREVAESKVAQVNEFSRMNQHPLLCTMEQ 125 >gi|255320456|ref|ZP_05361637.1| substrate modulator for ClpAP, directs protease activity towards aggregated protein [Acinetobacter radioresistens SK82] gi|262378352|ref|ZP_06071509.1| substrate modulator for ClpAP [Acinetobacter radioresistens SH164] gi|255302428|gb|EET81664.1| substrate modulator for ClpAP, directs protease activity towards aggregated protein [Acinetobacter radioresistens SK82] gi|262299637|gb|EEY87549.1| substrate modulator for ClpAP [Acinetobacter radioresistens SH164] Length = 137 Score = 166 bits (420), Expect = 1e-39, Method: Composition-based stats. Identities = 46/124 (37%), Positives = 72/124 (58%), Gaps = 3/124 (2%) Query: 18 ILALMSFIFMADSRMNKKGIAEFDNCLDSEVRFSS---KVRVPKLYRVLLVNDNYTPMEF 74 + A + D +N + ++ D E+ +++ P LY V+L+ND+YTPM+F Sbjct: 13 VKASFCQTGLVDWHLNPRLSDSQNDEADGEIAVKPAPPQLKKPPLYAVVLLNDDYTPMDF 72 Query: 75 VIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCI 134 VI +LQ +F + + A +ML VH++G G G+Y +IAE K NQV NY+R +PL C Sbjct: 73 VIEILQQYFALNLDQATQVMLTVHYEGKGVAGIYPRDIAETKANQVNNYARSQGHPLLCQ 132 Query: 135 MEQK 138 +E K Sbjct: 133 IEPK 136 >gi|91774864|ref|YP_544620.1| ATP-dependent Clp protease adaptor protein ClpS [Methylobacillus flagellatus KT] gi|91708851|gb|ABE48779.1| ATP-dependent Clp protease adaptor protein ClpS [Methylobacillus flagellatus KT] Length = 128 Score = 166 bits (420), Expect = 1e-39, Method: Composition-based stats. Identities = 49/87 (56%), Positives = 70/87 (80%) Query: 51 SSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAY 110 + ++ P +Y+V+L+ND+YTPMEFV+ V+Q FF+K+ E A IML+VH +G G CGVY + Sbjct: 41 KANIKPPSMYKVILLNDDYTPMEFVVDVMQRFFHKNREQATQIMLQVHTEGAGVCGVYPH 100 Query: 111 EIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 IAE KVNQV++Y+R+HQ+PLQC ME+ Sbjct: 101 GIAETKVNQVISYAREHQHPLQCTMEE 127 >gi|217976934|ref|YP_002361081.1| ATP-dependent Clp protease adaptor protein ClpS [Methylocella silvestris BL2] gi|217502310|gb|ACK49719.1| ATP-dependent Clp protease adaptor protein ClpS [Methylocella silvestris BL2] Length = 169 Score = 166 bits (420), Expect = 1e-39, Method: Composition-based stats. Identities = 55/91 (60%), Positives = 71/91 (78%) Query: 48 VRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGV 107 R ++ R P +YRVLL+ND+YTPMEFV+ VL+ +F K E A IML VH G+GECGV Sbjct: 79 TRTKTQTRRPSMYRVLLLNDDYTPMEFVVAVLKKYFNKGPEEATRIMLHVHQHGVGECGV 138 Query: 108 YAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 + YE+AE KV QVM+Y+R+HQ+PLQCIME+K Sbjct: 139 FTYEVAETKVTQVMDYARKHQHPLQCIMEKK 169 >gi|163744786|ref|ZP_02152146.1| ATP-dependent Clp protease, putative [Oceanibulbus indolifex HEL-45] gi|161381604|gb|EDQ06013.1| ATP-dependent Clp protease, putative [Oceanibulbus indolifex HEL-45] Length = 130 Score = 166 bits (420), Expect = 1e-39, Method: Composition-based stats. Identities = 49/117 (41%), Positives = 76/117 (64%), Gaps = 1/117 (0%) Query: 22 MSFIFMADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQN 81 ++ M G + D+ + + K + P LY+V+L+ND++TPMEFV+ VL+ Sbjct: 14 VADRPAPGWLMMANGPKDSDDT-ELLTKTRPKTKRPPLYKVMLLNDDFTPMEFVVLVLER 72 Query: 82 FFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 FF +H A IML VH +G+ GV+++EIAE KV QVM+++R+HQ+PLQC ME++ Sbjct: 73 FFGLNHAQAFEIMLTVHKKGLAVVGVFSHEIAETKVAQVMDFARRHQHPLQCTMEKE 129 >gi|325292723|ref|YP_004278587.1| ATP-dependent Clp protease adapter protein clpS 1 [Agrobacterium sp. H13-3] gi|325060576|gb|ADY64267.1| ATP-dependent Clp protease adapter protein clpS 1 [Agrobacterium sp. H13-3] Length = 117 Score = 166 bits (420), Expect = 1e-39, Method: Composition-based stats. Identities = 58/91 (63%), Positives = 73/91 (80%) Query: 48 VRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGV 107 R K + P LYRVLL+ND+YTPMEFVIH+L+ FF KD E A IML VH G+GECGV Sbjct: 27 TRVKPKTKRPNLYRVLLLNDDYTPMEFVIHILERFFQKDREAATRIMLHVHQHGVGECGV 86 Query: 108 YAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 + YE+AE KV+QVM+++RQHQ+PLQC+ME+K Sbjct: 87 FTYEVAETKVSQVMDFARQHQHPLQCVMEKK 117 >gi|127512494|ref|YP_001093691.1| ATP-dependent Clp protease adaptor protein ClpS [Shewanella loihica PV-4] gi|166214745|sp|A3QD84|CLPS_SHELP RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|126637789|gb|ABO23432.1| ATP-dependent Clp protease adaptor protein ClpS [Shewanella loihica PV-4] Length = 102 Score = 166 bits (420), Expect = 1e-39, Method: Composition-based stats. Identities = 48/101 (47%), Positives = 69/101 (68%) Query: 37 IAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLK 96 + + N E R +++ P +Y+V+L ND+YTPM+FVI VLQ FF K+ + A IML Sbjct: 1 MGKVGNIEHIEERAETELMPPSMYKVILNNDDYTPMDFVIEVLQLFFNKNEQEATDIMLA 60 Query: 97 VHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +HHQG G CGV+ + IAE KV QV ++RQ+Q+PL C +E+ Sbjct: 61 IHHQGKGICGVFPFGIAETKVAQVNQFARQNQHPLLCSLEK 101 >gi|24374169|ref|NP_718212.1| hypothetical protein SO_2627 [Shewanella oneidensis MR-1] gi|37077213|sp|Q8EDW4|CLPS_SHEON RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|24348676|gb|AAN55656.1|AE015704_7 conserved hypothetical protein [Shewanella oneidensis MR-1] Length = 102 Score = 166 bits (420), Expect = 1e-39, Method: Composition-based stats. Identities = 48/101 (47%), Positives = 69/101 (68%) Query: 37 IAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLK 96 + + N E R S++ P +Y+V+L ND+YTPM+FVI VLQ FF K+ + A IML Sbjct: 1 MGKTGNIEHVEERVESELMPPSMYKVILNNDDYTPMDFVIEVLQIFFRKNEQEATDIMLT 60 Query: 97 VHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +HHQG G CG++ + IAE KV QV ++RQ+Q+PL C +E+ Sbjct: 61 IHHQGKGICGIFPFGIAETKVIQVNQFARQNQHPLLCSLEK 101 >gi|77464259|ref|YP_353763.1| ATP-dependent Clp protease adaptor protein clpS [Rhodobacter sphaeroides 2.4.1] gi|126463101|ref|YP_001044215.1| ATP-dependent Clp protease adaptor protein ClpS [Rhodobacter sphaeroides ATCC 17029] gi|221640143|ref|YP_002526405.1| ATP-dependent Clp protease adapter protein clpS [Rhodobacter sphaeroides KD131] gi|77388677|gb|ABA79862.1| ATP-dependent Clp protease adaptor protein clpS [Rhodobacter sphaeroides 2.4.1] gi|126104765|gb|ABN77443.1| ATP-dependent Clp protease adaptor protein ClpS [Rhodobacter sphaeroides ATCC 17029] gi|221160924|gb|ACM01904.1| ATP-dependent Clp protease adapter protein clpS [Rhodobacter sphaeroides KD131] Length = 106 Score = 165 bits (419), Expect = 1e-39, Method: Composition-based stats. Identities = 53/108 (49%), Positives = 76/108 (70%), Gaps = 2/108 (1%) Query: 31 RMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETA 90 +K G D + ++ R SK + P LY+VLL+ND+YTPMEFV+HVL+ FF H A Sbjct: 1 MSDKTGGPGDDTSILTKTR--SKTQRPPLYKVLLLNDDYTPMEFVVHVLERFFGLSHAQA 58 Query: 91 KCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 IML VH +G+ GV+++E+AE KV QVM+++R+HQ+PLQC ME++ Sbjct: 59 FEIMLTVHKKGLAVVGVFSFEVAETKVAQVMDFARRHQHPLQCTMEKE 106 >gi|332187681|ref|ZP_08389416.1| ATP-dependent Clp protease adaptor ClpS family protein [Sphingomonas sp. S17] gi|332012247|gb|EGI54317.1| ATP-dependent Clp protease adaptor ClpS family protein [Sphingomonas sp. S17] Length = 118 Score = 165 bits (419), Expect = 1e-39, Method: Composition-based stats. Identities = 46/100 (46%), Positives = 69/100 (69%) Query: 38 AEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKV 97 + N L R ++ + P YRVL++ND+YTPMEFV+ LQ FF + A +ML V Sbjct: 18 DDEGNGLGVATRTRARTKQPTPYRVLMLNDDYTPMEFVVLCLQRFFRMSMDDATRVMLHV 77 Query: 98 HHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 H +G+G CGV++YE+AE KV QV++++R +Q+PLQC +E+ Sbjct: 78 HQRGVGVCGVFSYEVAETKVAQVIDFARANQHPLQCTLEK 117 >gi|120598597|ref|YP_963171.1| ATP-dependent Clp protease adaptor protein ClpS [Shewanella sp. W3-18-1] gi|146293324|ref|YP_001183748.1| ATP-dependent Clp protease adaptor protein ClpS [Shewanella putrefaciens CN-32] gi|166214746|sp|A4Y7L6|CLPS_SHEPC RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|166214748|sp|A1RIX2|CLPS_SHESW RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|120558690|gb|ABM24617.1| ATP-dependent Clp protease adaptor protein ClpS [Shewanella sp. W3-18-1] gi|145565014|gb|ABP75949.1| ATP-dependent Clp protease adaptor protein ClpS [Shewanella putrefaciens CN-32] gi|319426624|gb|ADV54698.1| ATP-dependent Clp protease adaptor protein ClpS [Shewanella putrefaciens 200] Length = 102 Score = 165 bits (419), Expect = 2e-39, Method: Composition-based stats. Identities = 48/101 (47%), Positives = 69/101 (68%) Query: 37 IAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLK 96 + + N E R S++ P +Y+V+L ND+YTPM+FVI VLQ FF K+ + A IML Sbjct: 1 MGKTGNIEHVEERVESELMPPSMYKVILNNDDYTPMDFVIEVLQVFFRKNEQEATDIMLT 60 Query: 97 VHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +HHQG G CG++ + IAE KV QV ++RQ+Q+PL C +E+ Sbjct: 61 IHHQGKGICGIFPFGIAETKVIQVNQFARQNQHPLLCSLEK 101 >gi|126732062|ref|ZP_01747864.1| ATP-dependent Clp protease adaptor protein ClpS [Sagittula stellata E-37] gi|126707351|gb|EBA06415.1| ATP-dependent Clp protease adaptor protein ClpS [Sagittula stellata E-37] Length = 116 Score = 165 bits (419), Expect = 2e-39, Method: Composition-based stats. Identities = 49/109 (44%), Positives = 70/109 (64%) Query: 30 SRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHET 89 M + + K + P LY+VLL+ND+YTPMEFV+HVL+ FF H Sbjct: 8 WTMAADEPDDGQGETGVVTKTKPKTKRPPLYKVLLLNDDYTPMEFVVHVLERFFGMTHAQ 67 Query: 90 AKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 A +ML VH +G+ GV+++EIAE KV QVM+++R+HQ+PLQC ME++ Sbjct: 68 AFEVMLTVHKKGVAVVGVFSHEIAETKVGQVMDFARRHQHPLQCTMEKE 116 >gi|37077096|sp|Q89JW5|CLPS2_BRAJA RecName: Full=ATP-dependent Clp protease adapter protein ClpS 2 Length = 110 Score = 165 bits (418), Expect = 2e-39, Method: Composition-based stats. Identities = 61/109 (55%), Positives = 78/109 (71%), Gaps = 1/109 (0%) Query: 30 SRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHET 89 + N+ G N + K + P LYRVL++ND+YTPMEFV+HVL+ FF KD E Sbjct: 3 NDENRSGSPTGPNT-SVITKVKPKTKRPNLYRVLILNDDYTPMEFVVHVLEKFFQKDVEA 61 Query: 90 AKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 A IML VHH GIGECGV+ YEIAE KV QVM+++R+HQ+PLQC+ME+K Sbjct: 62 ATKIMLHVHHHGIGECGVFTYEIAETKVTQVMDFARKHQHPLQCVMEKK 110 >gi|15888689|ref|NP_354370.1| ATP-dependent Clp protease adaptor protein ClpS [Agrobacterium tumefaciens str. C58] gi|24638402|sp|Q8UFN4|CLPS1_AGRT5 RecName: Full=ATP-dependent Clp protease adapter protein ClpS 1 gi|15156427|gb|AAK87155.1| ATP-dependent Clp protease adaptor protein ClpS [Agrobacterium tumefaciens str. C58] Length = 117 Score = 165 bits (418), Expect = 2e-39, Method: Composition-based stats. Identities = 58/91 (63%), Positives = 73/91 (80%) Query: 48 VRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGV 107 R K + P LYRVLL+ND+YTPMEFVIH+L+ FF KD E A IML VH G+GECGV Sbjct: 27 TRVKPKTKRPNLYRVLLLNDDYTPMEFVIHILERFFQKDREAATRIMLHVHQHGVGECGV 86 Query: 108 YAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 + YE+AE KV+QVM+++RQHQ+PLQC+ME+K Sbjct: 87 FTYEVAETKVSQVMDFARQHQHPLQCVMEKK 117 >gi|114569835|ref|YP_756515.1| ATP-dependent Clp protease adaptor protein ClpS [Maricaulis maris MCS10] gi|122316182|sp|Q0AQ60|CLPS_MARMM RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|114340297|gb|ABI65577.1| ATP-dependent Clp protease adaptor protein ClpS [Maricaulis maris MCS10] Length = 109 Score = 165 bits (418), Expect = 2e-39, Method: Composition-based stats. Identities = 53/112 (47%), Positives = 70/112 (62%), Gaps = 3/112 (2%) Query: 27 MADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKD 86 M + + + G+ E + + P LYRVLL+ND+YTPMEFV+ VL F K Sbjct: 1 MTERKHDDTGVEE---GTGLATKTRPATKKPSLYRVLLLNDDYTPMEFVVEVLARIFRKS 57 Query: 87 HETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 E A IML VH G+G CGVY YE+AE KV QVM+ +R+ Q+PLQC ME++ Sbjct: 58 PEDAARIMLHVHQNGVGMCGVYTYEVAETKVAQVMDAARRAQHPLQCTMEKE 109 >gi|149928085|ref|ZP_01916332.1| ATP-dependent Clp protease adaptor protein ClpS [Limnobacter sp. MED105] gi|149823171|gb|EDM82408.1| ATP-dependent Clp protease adaptor protein ClpS [Limnobacter sp. MED105] Length = 134 Score = 165 bits (418), Expect = 2e-39, Method: Composition-based stats. Identities = 53/125 (42%), Positives = 74/125 (59%), Gaps = 5/125 (4%) Query: 15 RDGILALMS--FIFMADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPM 72 + G+L +D L+S+ K ++P +Y+V+L+ND+YTPM Sbjct: 12 KGGVLLSNPCCVPLRSDYNEVMSSQNNPSTVLESQT---QKAKLPPMYQVVLLNDDYTPM 68 Query: 73 EFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQ 132 EFV+ VLQ FF K E A IMLKVH +G G CGVY +IA KV V +++QHQ+PLQ Sbjct: 69 EFVVIVLQKFFGKGREQATQIMLKVHREGKGVCGVYPKDIASTKVEMVCGFAKQHQHPLQ 128 Query: 133 CIMEQ 137 C+ME+ Sbjct: 129 CVMEE 133 >gi|146276596|ref|YP_001166755.1| ATP-dependent Clp protease adaptor protein ClpS [Rhodobacter sphaeroides ATCC 17025] gi|166214741|sp|A4WPY6|CLPS_RHOS5 RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|145554837|gb|ABP69450.1| ATP-dependent Clp protease adaptor protein ClpS [Rhodobacter sphaeroides ATCC 17025] Length = 113 Score = 165 bits (418), Expect = 2e-39, Method: Composition-based stats. Identities = 53/109 (48%), Positives = 76/109 (69%), Gaps = 2/109 (1%) Query: 30 SRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHET 89 +K G D + ++ R SK + P LY+VLL+ND+YTPMEFV+HVL+ FF H Sbjct: 7 QMSDKTGGTGDDTSILTKTR--SKTQRPPLYKVLLLNDDYTPMEFVVHVLERFFGLSHAQ 64 Query: 90 AKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 A IML VH +G+ GV+++E+AE KV QVM+++R+HQ+PLQC ME++ Sbjct: 65 AFEIMLTVHKKGLAVVGVFSFEVAETKVAQVMDFARRHQHPLQCTMEKE 113 >gi|85374864|ref|YP_458926.1| hypothetical protein ELI_10185 [Erythrobacter litoralis HTCC2594] gi|84787947|gb|ABC64129.1| hypothetical protein ELI_10185 [Erythrobacter litoralis HTCC2594] Length = 127 Score = 165 bits (418), Expect = 2e-39, Method: Composition-based stats. Identities = 47/95 (49%), Positives = 70/95 (73%) Query: 43 CLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGI 102 + + +K + P Y+VL++ND+YTPMEFV+ VL+ FF D E A +ML VH +G+ Sbjct: 32 DVGVATKTRAKPKKPSQYKVLMLNDDYTPMEFVVMVLKRFFKMDLEQATRVMLHVHQKGV 91 Query: 103 GECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 G CG++ YE+AE KVNQVM+++RQ+Q+PLQC +E+ Sbjct: 92 GVCGIFPYEVAETKVNQVMDFARQNQHPLQCTLEK 126 >gi|325915388|ref|ZP_08177705.1| hypothetical protein XVE_1596 [Xanthomonas vesicatoria ATCC 35937] gi|325538435|gb|EGD10114.1| hypothetical protein XVE_1596 [Xanthomonas vesicatoria ATCC 35937] Length = 126 Score = 165 bits (418), Expect = 2e-39, Method: Composition-based stats. Identities = 55/109 (50%), Positives = 71/109 (65%), Gaps = 1/109 (0%) Query: 29 DSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHE 88 + RM +K E D+ L E +V P Y+VLL+ND+YTPM+FV+ VLQ FF D E Sbjct: 18 NGRMPRKTSHEHDHGLTVE-ASKPEVAPPPRYQVLLLNDDYTPMDFVVTVLQQFFNLDLE 76 Query: 89 TAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 A +ML VH +G G CGVY+ E+AE KV QV +SR +Q+PL C MEQ Sbjct: 77 RATQVMLHVHTRGRGVCGVYSREVAESKVAQVNEFSRMNQHPLLCTMEQ 125 >gi|241762133|ref|ZP_04760216.1| ATP-dependent Clp protease adaptor protein ClpS [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|260753723|ref|YP_003226616.1| ATP-dependent Clp protease adaptor protein ClpS [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|283856536|ref|YP_163460.2| ATP-dependent Clp protease adaptor protein ClpS [Zymomonas mobilis subsp. mobilis ZM4] gi|67460185|sp|Q5NLR1|CLPS_ZYMMO RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|241373383|gb|EER62983.1| ATP-dependent Clp protease adaptor protein ClpS [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|258553086|gb|ACV76032.1| ATP-dependent Clp protease adaptor protein ClpS [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|283775543|gb|AAV90349.2| ATP-dependent Clp protease adaptor protein ClpS [Zymomonas mobilis subsp. mobilis ZM4] Length = 107 Score = 164 bits (417), Expect = 2e-39, Method: Composition-based stats. Identities = 49/106 (46%), Positives = 75/106 (70%) Query: 32 MNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAK 91 M+ + D+ + R + + + P+ Y+VL++ND+YTPMEFV+ LQ FF E A Sbjct: 1 MSGDKDFDKDSDVTVITRTTPQTKKPQPYKVLMLNDDYTPMEFVVLCLQRFFRMGIEDAT 60 Query: 92 CIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +ML+VH +G+G CGV+ YE+AE KVNQV++++RQHQ+PLQC +E+ Sbjct: 61 KVMLQVHQRGVGICGVFTYEVAETKVNQVVDFARQHQHPLQCTLEK 106 >gi|254283858|ref|ZP_04958826.1| ATP-dependent Clp protease adaptor protein ClpS [gamma proteobacterium NOR51-B] gi|219680061|gb|EED36410.1| ATP-dependent Clp protease adaptor protein ClpS [gamma proteobacterium NOR51-B] Length = 132 Score = 164 bits (417), Expect = 3e-39, Method: Composition-based stats. Identities = 43/87 (49%), Positives = 60/87 (68%) Query: 51 SSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAY 110 K++ P LYRV+L+ND+YTPMEFV+ VL+ FF + + A +ML VH QG G CG+Y Sbjct: 40 KPKLKRPPLYRVILLNDDYTPMEFVVEVLERFFSMNRDKATQVMLAVHTQGKGVCGIYPR 99 Query: 111 EIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +IAE K QV +++HQ+PL C +E Sbjct: 100 DIAETKAAQVNQCAKEHQHPLLCEVEP 126 >gi|83945502|ref|ZP_00957849.1| ATP-dependent Clp protease adaptor protein ClpS [Oceanicaulis alexandrii HTCC2633] gi|83851078|gb|EAP88936.1| ATP-dependent Clp protease adaptor protein ClpS [Oceanicaulis alexandrii HTCC2633] Length = 108 Score = 164 bits (417), Expect = 3e-39, Method: Composition-based stats. Identities = 51/107 (47%), Positives = 71/107 (66%), Gaps = 1/107 (0%) Query: 32 MNKKGIAE-FDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETA 90 M++ + D V+ ++ + P +Y+VLL+ND+YTPMEFVI VL F+K E A Sbjct: 1 MSEPKKPDLPDQETGVTVKPRARTKRPSMYKVLLLNDDYTPMEFVIEVLVRIFHKGQEDA 60 Query: 91 KCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 IML VH G+G CGV+ YE+AE KV QVM+ +R+ Q+PLQC ME+ Sbjct: 61 TRIMLHVHQHGVGVCGVFTYEVAETKVAQVMDAARRAQHPLQCTMEK 107 >gi|262376116|ref|ZP_06069346.1| substrate modulator for ClpAP [Acinetobacter lwoffii SH145] gi|262308717|gb|EEY89850.1| substrate modulator for ClpAP [Acinetobacter lwoffii SH145] Length = 137 Score = 164 bits (416), Expect = 3e-39, Method: Composition-based stats. Identities = 47/115 (40%), Positives = 70/115 (60%), Gaps = 3/115 (2%) Query: 27 MADSRMNKKGIAEFDNCLDSEVRFS---SKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFF 83 + D ++ + E DS++ +++ P LY V+L+ND+YTPMEFVI +LQ +F Sbjct: 22 IVDWHISPRLANEPSEDGDSDLAVQTAPPELKRPPLYAVVLLNDDYTPMEFVIEILQQYF 81 Query: 84 YKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 + + A +ML VH++G G GVY +IAE K NQV NY+R +PL C +E K Sbjct: 82 AMNLDQATQVMLTVHYEGKGVAGVYPRDIAETKANQVNNYARSQGHPLLCQIEPK 136 >gi|329298246|ref|ZP_08255582.1| ATP-dependent Clp protease adaptor protein ClpS [Plautia stali symbiont] Length = 106 Score = 164 bits (416), Expect = 3e-39, Method: Composition-based stats. Identities = 50/107 (46%), Positives = 69/107 (64%), Gaps = 2/107 (1%) Query: 31 RMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETA 90 N F+ + +VR ++ P +Y+V+L ND+YTPMEFVI VLQ FF D E A Sbjct: 1 MANTNDWLNFERLAEDKVREG--LKPPSMYKVILNNDDYTPMEFVIDVLQKFFSYDVERA 58 Query: 91 KCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +MLKVH+ G CGV+ E+AE KV QV NY+R++Q+PL C +E+ Sbjct: 59 TQLMLKVHYHGKAICGVFTAEVAETKVAQVNNYARENQHPLLCTLEK 105 >gi|297564863|ref|YP_003683835.1| ATP-dependent Clp protease adaptor protein ClpS [Meiothermus silvanus DSM 9946] gi|296849312|gb|ADH62327.1| ATP-dependent Clp protease adaptor protein ClpS [Meiothermus silvanus DSM 9946] Length = 100 Score = 164 bits (416), Expect = 3e-39, Method: Composition-based stats. Identities = 50/94 (53%), Positives = 68/94 (72%) Query: 45 DSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGE 104 D++ + S+ R P Y+VLL+ND+YTPM+FV+ VL FF K A IML+VHH+G+G Sbjct: 7 DTKTKTQSRTRTPPQYKVLLLNDDYTPMDFVVEVLMRFFRKSELEATRIMLQVHHEGVGV 66 Query: 105 CGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 CGVY +EIAE KV+QVM + + +PLQCIME + Sbjct: 67 CGVYPFEIAETKVHQVMEAAAEEGHPLQCIMEPE 100 >gi|89069767|ref|ZP_01157103.1| ATP-dependent Clp protease adaptor protein clpS [Oceanicola granulosus HTCC2516] gi|89044713|gb|EAR50824.1| ATP-dependent Clp protease adaptor protein clpS [Oceanicola granulosus HTCC2516] Length = 113 Score = 164 bits (416), Expect = 4e-39, Method: Composition-based stats. Identities = 50/113 (44%), Positives = 74/113 (65%) Query: 26 FMADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYK 85 +AD M + +V K + P LY+VL++ND+YTPMEFV+HVL+ FF Sbjct: 1 MLADHNMMADNDDDGGTDAGVKVETRPKTKRPPLYKVLILNDDYTPMEFVVHVLERFFGL 60 Query: 86 DHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 H A +ML VH +G+ GV+++EIAE KV QVM+++++HQ+PLQC ME++ Sbjct: 61 SHAQAFDLMLTVHKKGLAVVGVFSFEIAETKVAQVMDFAQRHQHPLQCTMEKE 113 >gi|317047538|ref|YP_004115186.1| ATP-dependent Clp protease adaptor protein ClpS [Pantoea sp. At-9b] gi|316949155|gb|ADU68630.1| ATP-dependent Clp protease adaptor protein ClpS [Pantoea sp. At-9b] Length = 131 Score = 164 bits (415), Expect = 4e-39, Method: Composition-based stats. Identities = 50/112 (44%), Positives = 72/112 (64%), Gaps = 2/112 (1%) Query: 26 FMADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYK 85 F + N F++ + +VR ++ P +Y+V+L ND+YTPMEFVI VLQ FF Sbjct: 21 FRRNIMANTNDWLNFEHLAEDKVREG--LKPPSMYKVILNNDDYTPMEFVIDVLQKFFSY 78 Query: 86 DHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 D E A +MLKVH+QG CGV+ E+AE KV QV Y+R++++PL C +E+ Sbjct: 79 DVERATQLMLKVHYQGKAICGVFTAEVAETKVAQVNIYARENEHPLLCTLEK 130 >gi|119503235|ref|ZP_01625319.1| substrate modulator for ClpAP, directs protease activity towards aggregated proteins [marine gamma proteobacterium HTCC2080] gi|119460881|gb|EAW41972.1| substrate modulator for ClpAP, directs protease activity towards aggregated proteins [marine gamma proteobacterium HTCC2080] Length = 116 Score = 164 bits (415), Expect = 4e-39, Method: Composition-based stats. Identities = 47/112 (41%), Positives = 67/112 (59%), Gaps = 1/112 (0%) Query: 27 MADSRMNKKGIAEFDNCLDSEVR-FSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYK 85 M +M A+ D+ D V K++ P L++V+L+ND+YTPMEFV+ +L+++F Sbjct: 1 MYSWQMGPPDKADRDDEGDLAVAPAKPKLKRPPLFQVVLLNDDYTPMEFVVEILESYFRL 60 Query: 86 DHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 E A IML VH +G G CGVY +IAE K QV Y+R +PL C +E Sbjct: 61 GREQATQIMLMVHTKGKGVCGVYPRDIAESKATQVNTYARDSGHPLLCEVEP 112 >gi|126174686|ref|YP_001050835.1| ATP-dependent Clp protease adaptor protein ClpS [Shewanella baltica OS155] gi|153000985|ref|YP_001366666.1| ATP-dependent Clp protease adaptor protein ClpS [Shewanella baltica OS185] gi|160875698|ref|YP_001555014.1| ATP-dependent Clp protease adaptor protein ClpS [Shewanella baltica OS195] gi|217973055|ref|YP_002357806.1| ATP-dependent Clp protease adaptor protein ClpS [Shewanella baltica OS223] gi|304409063|ref|ZP_07390684.1| ATP-dependent Clp protease adaptor protein ClpS [Shewanella baltica OS183] gi|307303066|ref|ZP_07582821.1| ATP-dependent Clp protease adaptor protein ClpS [Shewanella baltica BA175] gi|166214743|sp|A3D5F3|CLPS_SHEB5 RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|166214744|sp|A6WP64|CLPS_SHEB8 RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|189082478|sp|A9L4G4|CLPS_SHEB9 RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|254763824|sp|B8E950|CLPS_SHEB2 RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|125997891|gb|ABN61966.1| ATP-dependent Clp protease adaptor protein ClpS [Shewanella baltica OS155] gi|151365603|gb|ABS08603.1| ATP-dependent Clp protease adaptor protein ClpS [Shewanella baltica OS185] gi|160861220|gb|ABX49754.1| ATP-dependent Clp protease adaptor protein ClpS [Shewanella baltica OS195] gi|217498190|gb|ACK46383.1| ATP-dependent Clp protease adaptor protein ClpS [Shewanella baltica OS223] gi|304352884|gb|EFM17281.1| ATP-dependent Clp protease adaptor protein ClpS [Shewanella baltica OS183] gi|306913426|gb|EFN43848.1| ATP-dependent Clp protease adaptor protein ClpS [Shewanella baltica BA175] gi|315267887|gb|ADT94740.1| ATP-dependent Clp protease adaptor protein ClpS [Shewanella baltica OS678] Length = 102 Score = 164 bits (415), Expect = 4e-39, Method: Composition-based stats. Identities = 49/101 (48%), Positives = 70/101 (69%) Query: 37 IAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLK 96 +A+ N E R S++ P +Y+V+L ND+YTPM+FVI VLQ FF K+ + A IML Sbjct: 1 MAKIGNIEHVEERVESELMPPSMYKVVLNNDDYTPMDFVIEVLQVFFRKNEQEATDIMLT 60 Query: 97 VHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +HHQG G CG++ + IAE KV QV ++RQ+Q+PL C +E+ Sbjct: 61 IHHQGKGICGIFPFGIAETKVIQVNQFARQNQHPLLCSLEK 101 >gi|170727045|ref|YP_001761071.1| ATP-dependent Clp protease adaptor protein ClpS [Shewanella woodyi ATCC 51908] gi|238688675|sp|B1KIC5|CLPS_SHEWM RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|169812392|gb|ACA86976.1| ATP-dependent Clp protease adaptor protein ClpS [Shewanella woodyi ATCC 51908] Length = 102 Score = 164 bits (415), Expect = 4e-39, Method: Composition-based stats. Identities = 50/101 (49%), Positives = 68/101 (67%) Query: 37 IAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLK 96 + + N E R S+V P +Y+V+L ND+YTPM+FVI VLQ FF K E A IML Sbjct: 1 MGKAGNIEHVEERVESEVMPPSMYKVILNNDDYTPMDFVIEVLQLFFKKTEEQATDIMLA 60 Query: 97 VHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +HHQG G CG++ + IAE KV QV ++RQ+Q+PL C +E+ Sbjct: 61 IHHQGKGICGIFPFGIAETKVAQVNQFARQNQHPLLCSLEK 101 >gi|167623651|ref|YP_001673945.1| ATP-dependent Clp protease adaptor protein ClpS [Shewanella halifaxensis HAW-EB4] gi|189082479|sp|B0TQ07|CLPS_SHEHH RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|167353673|gb|ABZ76286.1| ATP-dependent Clp protease adaptor protein ClpS [Shewanella halifaxensis HAW-EB4] Length = 102 Score = 164 bits (415), Expect = 4e-39, Method: Composition-based stats. Identities = 46/101 (45%), Positives = 69/101 (68%) Query: 37 IAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLK 96 ++ +N E ++ + P +Y+V+L ND+YTPM+FVI +LQ FF KD + A IML Sbjct: 1 MSRTENIEQIEESVEAEFKQPSMYKVILNNDDYTPMDFVIEILQLFFKKDEQQATEIMLA 60 Query: 97 VHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +HH+G G CG+Y + IAE KV QV ++RQ+Q+PL C +E+ Sbjct: 61 IHHKGKGICGIYPFGIAETKVAQVNQFARQNQHPLLCSLEE 101 >gi|192291927|ref|YP_001992532.1| ATP-dependent Clp protease adaptor protein ClpS [Rhodopseudomonas palustris TIE-1] gi|192285676|gb|ACF02057.1| ATP-dependent Clp protease adaptor protein ClpS [Rhodopseudomonas palustris TIE-1] Length = 115 Score = 164 bits (415), Expect = 4e-39, Method: Composition-based stats. Identities = 56/116 (48%), Positives = 74/116 (63%), Gaps = 4/116 (3%) Query: 23 SFIFMADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNF 82 D + + + + P LYRVL++ND+YTPMEFV+HVL+ F Sbjct: 4 PLAMAGDGGRSGPSTP----STSVITKTKPRTKRPNLYRVLILNDDYTPMEFVVHVLEKF 59 Query: 83 FYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 F D E A +ML VHH GIGECGV+ YEIAE KV QVM+++R+HQ+PLQC+ME+K Sbjct: 60 FQMDVEAATKVMLHVHHHGIGECGVFTYEIAETKVTQVMDFARKHQHPLQCVMEKK 115 >gi|163854197|ref|YP_001642240.1| ATP-dependent Clp protease adaptor protein ClpS [Methylobacterium extorquens PA1] gi|240141657|ref|YP_002966137.1| ATP-dependent Clp protease adaptor protein clpS [Methylobacterium extorquens AM1] gi|254564165|ref|YP_003071260.1| ATP-dependent Clp protease adaptor protein clpS [Methylobacterium extorquens DM4] gi|163665802|gb|ABY33169.1| ATP-dependent Clp protease adaptor protein ClpS [Methylobacterium extorquens PA1] gi|240011634|gb|ACS42860.1| ATP-dependent Clp protease adaptor protein clpS [Methylobacterium extorquens AM1] gi|254271443|emb|CAX27458.1| ATP-dependent Clp protease adaptor protein clpS [Methylobacterium extorquens DM4] Length = 112 Score = 164 bits (415), Expect = 4e-39, Method: Composition-based stats. Identities = 55/112 (49%), Positives = 78/112 (69%) Query: 27 MADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKD 86 M + + + + R + + P LYRVLL+ND+YTPMEFV+HV++ FF K Sbjct: 1 MRAASTPRSPGDDDRSGTAIITRTKPRAKRPSLYRVLLLNDDYTPMEFVVHVVERFFNKS 60 Query: 87 HETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 H+ A IM+ VHH G+GECGV+ YE+AE KV QVM+++R+HQ+PLQC+ME+K Sbjct: 61 HDDAYQIMMHVHHNGVGECGVFTYEVAETKVTQVMDFARKHQHPLQCVMEKK 112 >gi|220920395|ref|YP_002495696.1| ATP-dependent Clp protease adaptor protein ClpS [Methylobacterium nodulans ORS 2060] gi|219945001|gb|ACL55393.1| ATP-dependent Clp protease adaptor protein ClpS [Methylobacterium nodulans ORS 2060] Length = 135 Score = 164 bits (415), Expect = 4e-39, Method: Composition-based stats. Identities = 54/91 (59%), Positives = 70/91 (76%) Query: 48 VRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGV 107 R + P LYRVLL+ND+YTPMEFV+HV++ FF K E A IML VH G+GECGV Sbjct: 45 TRTRPITKRPNLYRVLLLNDDYTPMEFVVHVVERFFNKSREDATRIMLHVHQNGVGECGV 104 Query: 108 YAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 + YE+AE KV QVM+++R+HQ+PLQC+ME+K Sbjct: 105 FTYEVAETKVTQVMDFARKHQHPLQCVMEKK 135 >gi|170740498|ref|YP_001769153.1| ATP-dependent Clp protease adaptor protein ClpS [Methylobacterium sp. 4-46] gi|168194772|gb|ACA16719.1| ATP-dependent Clp protease adaptor protein ClpS [Methylobacterium sp. 4-46] Length = 142 Score = 164 bits (415), Expect = 5e-39, Method: Composition-based stats. Identities = 54/119 (45%), Positives = 75/119 (63%) Query: 20 ALMSFIFMADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVL 79 +++ + + R + P LYRVLL+ND+YTPMEFV+HV+ Sbjct: 24 PIVAATPRTPGNGGAGQGGDGRSGTAVITRTRPVTKRPNLYRVLLLNDDYTPMEFVVHVV 83 Query: 80 QNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 + FF K E A IML VH G+GECGV+ YE+AE KV QVM+++R+HQ+PLQC+ME+K Sbjct: 84 ERFFNKSREDATRIMLHVHQNGVGECGVFTYEVAETKVTQVMDFARKHQHPLQCVMEKK 142 >gi|110834145|ref|YP_693004.1| hypothetical protein ABO_1284 [Alcanivorax borkumensis SK2] gi|110647256|emb|CAL16732.1| conserved hypothetical protein [Alcanivorax borkumensis SK2] Length = 124 Score = 164 bits (415), Expect = 5e-39, Method: Composition-based stats. Identities = 45/104 (43%), Positives = 68/104 (65%), Gaps = 1/104 (0%) Query: 35 KGIAEFDNCLDSEVRF-SSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCI 93 ++ D D V K++ P +Y+VL++ND+YTPM+FV+ +L++FF D E A + Sbjct: 20 DSSSDPDRHGDLAVEEAKPKLKPPSMYKVLMLNDDYTPMDFVVEILEDFFNLDREQATRV 79 Query: 94 MLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 ML VH +G CGVY +IAE K QV+ Y+R++Q+PL C +EQ Sbjct: 80 MLTVHTEGKAVCGVYPQDIAETKATQVVEYARENQHPLMCQVEQ 123 >gi|83593445|ref|YP_427197.1| ATP-dependent Clp protease adaptor protein ClpS [Rhodospirillum rubrum ATCC 11170] gi|83576359|gb|ABC22910.1| ATP-dependent Clp protease adaptor protein ClpS [Rhodospirillum rubrum ATCC 11170] Length = 137 Score = 164 bits (415), Expect = 5e-39, Method: Composition-based stats. Identities = 52/91 (57%), Positives = 71/91 (78%) Query: 48 VRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGV 107 V+ K + P +YRVL++ND+YTPMEFV+HVL+ FF K HE A IML VH +G+G CGV Sbjct: 47 VKAKPKTKKPSMYRVLMLNDDYTPMEFVVHVLERFFGKTHEEATNIMLHVHQRGVGLCGV 106 Query: 108 YAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 Y YE+AE KV+QVM+ +R+ Q+PLQC +E++ Sbjct: 107 YTYEVAETKVSQVMDLARRSQHPLQCTLEKE 137 >gi|329889200|ref|ZP_08267543.1| ATP-dependent Clp protease adaptor protein ClpS family protein [Brevundimonas diminuta ATCC 11568] gi|328844501|gb|EGF94065.1| ATP-dependent Clp protease adaptor protein ClpS family protein [Brevundimonas diminuta ATCC 11568] Length = 109 Score = 164 bits (415), Expect = 5e-39, Method: Composition-based stats. Identities = 52/104 (50%), Positives = 68/104 (65%) Query: 34 KKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCI 93 + G K++ P LYRVL++ND+YTPMEFVI+VL+ FF K E A I Sbjct: 5 RPGEQGGGAGAAVVTETKPKLQRPSLYRVLILNDDYTPMEFVIYVLERFFQKSREDATRI 64 Query: 94 MLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 ML VH G+G CGV+ YE+AE KV QV+ +R+HQ+PLQC ME+ Sbjct: 65 MLHVHQHGVGVCGVFTYEVAETKVAQVVETARRHQHPLQCTMEK 108 >gi|149201108|ref|ZP_01878083.1| ATP-dependent Clp protease adaptor protein ClpS [Roseovarius sp. TM1035] gi|149145441|gb|EDM33467.1| ATP-dependent Clp protease adaptor protein ClpS [Roseovarius sp. TM1035] Length = 112 Score = 163 bits (414), Expect = 5e-39, Method: Composition-based stats. Identities = 52/112 (46%), Positives = 71/112 (63%) Query: 27 MADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKD 86 M + G E V K + P LY+VLL+ND+YTPMEFV+ VL+ FF Sbjct: 1 MIQHPITMTGPKEDAGDPAVVVATRPKTKRPPLYKVLLLNDDYTPMEFVVAVLERFFGMS 60 Query: 87 HETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 H A IML VH +G+ GV+++EIAE KV QVM+++R+HQ+PLQC ME++ Sbjct: 61 HAQAFEIMLTVHKKGLAVVGVFSHEIAETKVAQVMDFARRHQHPLQCTMEKE 112 >gi|91977524|ref|YP_570183.1| ATP-dependent Clp protease adaptor protein ClpS [Rhodopseudomonas palustris BisB5] gi|91683980|gb|ABE40282.1| ATP-dependent Clp protease adaptor protein ClpS [Rhodopseudomonas palustris BisB5] Length = 109 Score = 163 bits (414), Expect = 6e-39, Method: Composition-based stats. Identities = 56/91 (61%), Positives = 72/91 (79%) Query: 48 VRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGV 107 + K + P LYRVL++ND+YTPMEFV+HVL+ FF D E A +ML VHH GIGECGV Sbjct: 19 TKVKPKTKRPNLYRVLILNDDYTPMEFVVHVLEKFFQMDVEAATQVMLHVHHHGIGECGV 78 Query: 108 YAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 + YEIAE KV QVM+++R+HQ+PLQC+ME+K Sbjct: 79 FTYEIAETKVTQVMDFARKHQHPLQCVMEKK 109 >gi|85704460|ref|ZP_01035562.1| ATP-dependent Clp protease, adaptor protein ClpS [Roseovarius sp. 217] gi|85670868|gb|EAQ25727.1| ATP-dependent Clp protease, adaptor protein ClpS [Roseovarius sp. 217] Length = 112 Score = 163 bits (414), Expect = 6e-39, Method: Composition-based stats. Identities = 52/112 (46%), Positives = 71/112 (63%) Query: 27 MADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKD 86 M + G E V K + P LY+VLL+ND+YTPMEFV+ VL+ FF Sbjct: 1 MIQHPITMAGPDEDAGDPAVVVATRPKTKRPPLYKVLLLNDDYTPMEFVVAVLERFFGMS 60 Query: 87 HETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 H A IML VH +G+ GV+++EIAE KV QVM+++R+HQ+PLQC ME++ Sbjct: 61 HAQAFEIMLTVHKKGLAVVGVFSHEIAETKVAQVMDFARRHQHPLQCTMEKE 112 >gi|163733946|ref|ZP_02141388.1| ATP-dependent Clp protease, putative [Roseobacter litoralis Och 149] gi|161393057|gb|EDQ17384.1| ATP-dependent Clp protease, putative [Roseobacter litoralis Och 149] Length = 113 Score = 163 bits (414), Expect = 6e-39, Method: Composition-based stats. Identities = 50/109 (45%), Positives = 76/109 (69%), Gaps = 2/109 (1%) Query: 30 SRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHET 89 M+ + + D + + + K + P LY+VLL+ND++TPMEFV+HVL+ FF +H Sbjct: 6 YMMSDRSEDDGDTSILTATK--PKTKRPPLYKVLLLNDDFTPMEFVVHVLERFFGLNHAQ 63 Query: 90 AKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 A IML VH +G+ GV+++EIAE KV QVM+++R+HQ+PLQC ME++ Sbjct: 64 AFEIMLTVHKKGVAVVGVFSHEIAETKVAQVMDFARRHQHPLQCTMEKE 112 >gi|289208442|ref|YP_003460508.1| ATP-dependent Clp protease adaptor protein ClpS [Thioalkalivibrio sp. K90mix] gi|288944073|gb|ADC71772.1| ATP-dependent Clp protease adaptor protein ClpS [Thioalkalivibrio sp. K90mix] Length = 108 Score = 163 bits (414), Expect = 6e-39, Method: Composition-based stats. Identities = 47/107 (43%), Positives = 72/107 (67%), Gaps = 1/107 (0%) Query: 32 MNKKGIAEFDNCLDSEVRF-SSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETA 90 M++K D+ ++ V +++ P+ Y+V+L+ND++TPMEFV+ VL+ FF D E A Sbjct: 1 MSEKKPQIPDHDSNTAVEESRPELKPPRQYKVVLLNDDFTPMEFVVEVLETFFSMDREKA 60 Query: 91 KCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +ML VH +G G CG+Y ++AE KV QV +Y+R HQ+PL C ME+ Sbjct: 61 TQVMLHVHTRGKGICGIYTRDVAETKVAQVNDYARSHQHPLLCSMEE 107 >gi|56459784|ref|YP_155065.1| ATP-dependent Clp protease adaptor protein ClpS [Idiomarina loihiensis L2TR] gi|67460203|sp|Q5R0C3|CLPS_IDILO RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|56178794|gb|AAV81516.1| Uncharacterized conserved protein [Idiomarina loihiensis L2TR] Length = 102 Score = 163 bits (413), Expect = 7e-39, Method: Composition-based stats. Identities = 48/102 (47%), Positives = 71/102 (69%) Query: 37 IAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLK 96 +++FD+ S+ +++ P +Y+V++ ND+YTPM+FVI VL FF D E A ML+ Sbjct: 1 MSQFDHQHLSDTEEKQELKPPSMYKVIINNDDYTPMDFVIEVLMRFFKMDQERATDTMLQ 60 Query: 97 VHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 VH++G CGVY+ EIAE KV QV Y+R++Q+PL C MEQ+ Sbjct: 61 VHYKGKAVCGVYSAEIAETKVVQVNQYARENQHPLLCTMEQE 102 >gi|254465322|ref|ZP_05078733.1| ATP-dependent Clp protease adaptor protein ClpS [Rhodobacterales bacterium Y4I] gi|206686230|gb|EDZ46712.1| ATP-dependent Clp protease adaptor protein ClpS [Rhodobacterales bacterium Y4I] Length = 121 Score = 163 bits (413), Expect = 7e-39, Method: Composition-based stats. Identities = 48/114 (42%), Positives = 72/114 (63%) Query: 25 IFMADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFY 84 + M + ++ D + K + P Y+VLL+ND+YTPMEFV+ VL+ FF Sbjct: 7 LLMPLQPIMMTDHSDDDTEAGVLTKTRPKTKRPPRYKVLLLNDDYTPMEFVVMVLERFFG 66 Query: 85 KDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 H A IML VH +G+ GV+++E+AE KV QVM+++R+HQ+PLQC ME++ Sbjct: 67 MTHAQAFEIMLTVHKKGVAVVGVFSHEVAETKVGQVMDFARRHQHPLQCTMEKE 120 >gi|260459200|ref|ZP_05807455.1| ATP-dependent Clp protease adaptor protein ClpS [Mesorhizobium opportunistum WSM2075] gi|259034754|gb|EEW36010.1| ATP-dependent Clp protease adaptor protein ClpS [Mesorhizobium opportunistum WSM2075] Length = 131 Score = 163 bits (413), Expect = 7e-39, Method: Composition-based stats. Identities = 62/131 (47%), Positives = 86/131 (65%), Gaps = 1/131 (0%) Query: 9 MYHRVKRDGILALMSFIFMADSRMNKKGIA-EFDNCLDSEVRFSSKVRVPKLYRVLLVND 67 M R ++D + ++ N G E R +K + P LYRVL++ND Sbjct: 1 MRIRKRQDYVTIGLTATTQVARMQNGGGDGNEAGRGTAVITRTKTKTKKPSLYRVLILND 60 Query: 68 NYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQH 127 +YTPMEFV+HVL+ FF KD E A IML VH+ G+GECGVY +E+AE KV+QVM+++RQ+ Sbjct: 61 DYTPMEFVVHVLERFFQKDREAATRIMLHVHNHGVGECGVYTFEVAETKVSQVMDFARQN 120 Query: 128 QYPLQCIMEQK 138 Q+PLQC+ME+K Sbjct: 121 QHPLQCVMEKK 131 >gi|89056376|ref|YP_511827.1| ATP-dependent Clp protease adaptor protein ClpS [Jannaschia sp. CCS1] gi|88865925|gb|ABD56802.1| ATP-dependent Clp protease adaptor protein ClpS [Jannaschia sp. CCS1] Length = 116 Score = 163 bits (413), Expect = 7e-39, Method: Composition-based stats. Identities = 52/113 (46%), Positives = 76/113 (67%), Gaps = 3/113 (2%) Query: 26 FMADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYK 85 MAD N G D + + +K + P +Y+V+L+ND+YTPMEFV+HVL+ FF Sbjct: 6 MMADEPDNVDG---GDGDVSVATKTKTKTQRPPMYKVMLLNDDYTPMEFVVHVLERFFGI 62 Query: 86 DHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 H A IML VH +G+ GV+++EIAE KV QVM+++R++Q+PLQC ME++ Sbjct: 63 THSQAVEIMLVVHKKGLAVVGVFSHEIAETKVAQVMDFARRNQHPLQCTMEKE 115 >gi|67460482|sp|Q6N535|CLPS2_RHOPA RecName: Full=ATP-dependent Clp protease adapter protein ClpS 2 Length = 109 Score = 163 bits (413), Expect = 7e-39, Method: Composition-based stats. Identities = 55/91 (60%), Positives = 72/91 (79%) Query: 48 VRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGV 107 + + + P LYRVL++ND+YTPMEFV+HVL+ FF D E A +ML VHH GIGECGV Sbjct: 19 TKTKPRTKRPNLYRVLILNDDYTPMEFVVHVLEKFFQMDVEAATKVMLHVHHHGIGECGV 78 Query: 108 YAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 + YEIAE KV QVM+++R+HQ+PLQC+ME+K Sbjct: 79 FTYEIAETKVTQVMDFARKHQHPLQCVMEKK 109 >gi|317491428|ref|ZP_07949864.1| ATP-dependent Clp protease adaptor protein ClpS [Enterobacteriaceae bacterium 9_2_54FAA] gi|316920975|gb|EFV42298.1| ATP-dependent Clp protease adaptor protein ClpS [Enterobacteriaceae bacterium 9_2_54FAA] Length = 107 Score = 163 bits (413), Expect = 8e-39, Method: Composition-based stats. Identities = 47/107 (43%), Positives = 68/107 (63%), Gaps = 2/107 (1%) Query: 31 RMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETA 90 N+ F+ DS + +V+ P +Y+V+L ND+YTPMEFVI VLQ FF D E A Sbjct: 1 MANQNDWLNFEQLADS--KQIDEVKPPSMYKVILNNDDYTPMEFVIDVLQKFFSYDIERA 58 Query: 91 KCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +ML VH++G CGV+ E+AE KV V Y+R++++PL C +E+ Sbjct: 59 TQLMLTVHYKGKAICGVFTAEVAETKVAHVNRYARENEHPLLCTLEK 105 >gi|162452665|ref|YP_001615032.1| hypothetical protein sce4389 [Sorangium cellulosum 'So ce 56'] gi|161163247|emb|CAN94552.1| hypothetical protein sce4389 [Sorangium cellulosum 'So ce 56'] Length = 132 Score = 163 bits (412), Expect = 9e-39, Method: Composition-based stats. Identities = 47/126 (37%), Positives = 70/126 (55%), Gaps = 5/126 (3%) Query: 13 VKRDGILALMSFIFMADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPM 72 +R G LA++ FM + ++ D D KV P+ Y+V+ ND+YT M Sbjct: 12 ARRGGALAILPDGFMPNDPEERE-----DRQGDLATERERKVEKPRRYKVVFHNDDYTTM 66 Query: 73 EFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQ 132 EFV+ VL FF++ A IML VHH+G G GVY ++AE KV QV +++++H PL+ Sbjct: 67 EFVVLVLMKFFHRTETEATHIMLSVHHRGHGVAGVYTKDVAETKVAQVQDFAKEHGMPLR 126 Query: 133 CIMEQK 138 E + Sbjct: 127 LTAEPE 132 >gi|115525406|ref|YP_782317.1| ATP-dependent Clp protease adaptor protein ClpS [Rhodopseudomonas palustris BisA53] gi|115519353|gb|ABJ07337.1| ATP-dependent Clp protease adaptor protein ClpS [Rhodopseudomonas palustris BisA53] Length = 109 Score = 163 bits (412), Expect = 9e-39, Method: Composition-based stats. Identities = 54/91 (59%), Positives = 72/91 (79%) Query: 48 VRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGV 107 + + + P +YRVL++ND+YTPMEFV+HVL+ FF D E A +ML VHH GIGECGV Sbjct: 19 TKTKPRTKRPSMYRVLILNDDYTPMEFVVHVLEKFFQMDVEAATKVMLHVHHHGIGECGV 78 Query: 108 YAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 + YEIAE KV QVM+++R+HQ+PLQC+ME+K Sbjct: 79 FTYEIAETKVTQVMDFARKHQHPLQCVMEKK 109 >gi|254474220|ref|ZP_05087611.1| ATP-dependent Clp protease adaptor protein ClpS [Pseudovibrio sp. JE062] gi|211956750|gb|EEA91959.1| ATP-dependent Clp protease adaptor protein ClpS [Pseudovibrio sp. JE062] Length = 109 Score = 163 bits (412), Expect = 1e-38, Method: Composition-based stats. Identities = 56/93 (60%), Positives = 75/93 (80%) Query: 46 SEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGEC 105 + + K + P LYRVLL+ND+YTPMEFVIHV++ FF+ D E+A IML VHH G+GEC Sbjct: 17 TVTKPKPKTKRPSLYRVLLLNDDYTPMEFVIHVVERFFHLDRESATQIMLHVHHHGVGEC 76 Query: 106 GVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 GV+ YE+AE KV QVM+++R+HQ+PLQC+ME+K Sbjct: 77 GVFTYEVAETKVTQVMDFARKHQHPLQCVMEKK 109 >gi|146282647|ref|YP_001172800.1| ATP-dependent Clp protease adaptor protein ClpS [Pseudomonas stutzeri A1501] gi|145570852|gb|ABP79958.1| ATP-dependent Clp protease adaptor protein clpS [Pseudomonas stutzeri A1501] Length = 167 Score = 163 bits (412), Expect = 1e-38, Method: Composition-based stats. Identities = 41/126 (32%), Positives = 67/126 (53%), Gaps = 1/126 (0%) Query: 12 RVKRDGILALMSFIFMADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTP 71 R + + + I + ++ D + +++ P +Y+V++ ND+YTP Sbjct: 41 RPRTVMRMHAFAQIRL-TFNQDRPLEDGDDASGLAVEEAKPQLKAPPMYKVVMFNDDYTP 99 Query: 72 MEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPL 131 M+FV+ VL+ F E A IML VH +G CGVY ++AE K QV Y+R+ Q+PL Sbjct: 100 MDFVVEVLEGIFNHSREQATKIMLAVHTEGQAVCGVYTRDVAETKAMQVNQYARECQHPL 159 Query: 132 QCIMEQ 137 C +E+ Sbjct: 160 LCEIEK 165 >gi|323138622|ref|ZP_08073689.1| ATP-dependent Clp protease adaptor protein ClpS [Methylocystis sp. ATCC 49242] gi|322396110|gb|EFX98644.1| ATP-dependent Clp protease adaptor protein ClpS [Methylocystis sp. ATCC 49242] Length = 130 Score = 163 bits (412), Expect = 1e-38, Method: Composition-based stats. Identities = 52/91 (57%), Positives = 69/91 (75%) Query: 48 VRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGV 107 + + R P +YRVLL+ND+YT EFV+ VL+ +F K E A IML VH+ G+GECGV Sbjct: 40 TQARQQTRRPNMYRVLLLNDDYTTQEFVVIVLRKYFNKSVEEATRIMLHVHNHGVGECGV 99 Query: 108 YAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 Y YE+AE KV QVM+++R+HQ+PLQCIME+K Sbjct: 100 YTYEVAETKVTQVMDFARKHQHPLQCIMEKK 130 >gi|222148871|ref|YP_002549828.1| ATP-dependent Clp protease adaptor protein ClpS [Agrobacterium vitis S4] gi|221735857|gb|ACM36820.1| conserved hypothetical protein [Agrobacterium vitis S4] Length = 117 Score = 163 bits (412), Expect = 1e-38, Method: Composition-based stats. Identities = 56/99 (56%), Positives = 75/99 (75%) Query: 40 FDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHH 99 + R K + P LYRVLL+ND+YTPMEFVIH+L+ FF KD E A +ML VH+ Sbjct: 19 PNRGTSVITRTKPKTKKPNLYRVLLLNDDYTPMEFVIHILERFFQKDREAATLVMLHVHN 78 Query: 100 QGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 G+GECGV+ YE+AE KV+QVM+++RQH++PLQC+ME+K Sbjct: 79 HGVGECGVFTYEVAETKVSQVMDFARQHEHPLQCVMEKK 117 >gi|104781332|ref|YP_607830.1| ATP-dependent Clp protease adaptor protein ClpS [Pseudomonas entomophila L48] gi|95110319|emb|CAK15026.1| ATP-dependent Clp protease adaptor protein clpS [Pseudomonas entomophila L48] Length = 124 Score = 163 bits (412), Expect = 1e-38, Method: Composition-based stats. Identities = 43/120 (35%), Positives = 68/120 (56%) Query: 18 ILALMSFIFMADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIH 77 + + + F D + + E D + ++ P +Y+V+L ND+YTPM+FV+ Sbjct: 3 VPSEIRLTFNQDRPQSNEDGHEDDGSGLAVQEAKPILQAPPMYKVVLFNDDYTPMDFVVE 62 Query: 78 VLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 VL+ FF + E A IML VH +G CG++ +IAE K QV Y+R+ Q+PL C +E+ Sbjct: 63 VLETFFNLNRELATKIMLTVHTEGRAVCGLFTRDIAETKAMQVNQYARESQHPLLCEIEK 122 >gi|110678604|ref|YP_681611.1| ATP-dependent Clp protease, putative [Roseobacter denitrificans OCh 114] gi|123362148|sp|Q16AR8|CLPS_ROSDO RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|109454720|gb|ABG30925.1| ATP-dependent Clp protease, putative [Roseobacter denitrificans OCh 114] Length = 113 Score = 162 bits (411), Expect = 1e-38, Method: Composition-based stats. Identities = 50/108 (46%), Positives = 76/108 (70%), Gaps = 2/108 (1%) Query: 31 RMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETA 90 M+ + + D + + + K + P LY+VLL+ND++TPMEFV+HVL+ FF +H A Sbjct: 7 MMSDRSEDDGDTSILTATK--PKTKRPPLYKVLLLNDDFTPMEFVVHVLERFFGLNHAQA 64 Query: 91 KCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 IML VH +G+ GV+++EIAE KV QVM+++R+HQ+PLQC ME++ Sbjct: 65 FEIMLTVHKKGVAVVGVFSHEIAETKVAQVMDFARRHQHPLQCTMEKE 112 >gi|300716062|ref|YP_003740865.1| ATP-dependent Clp protease adaptor protein [Erwinia billingiae Eb661] gi|299061898|emb|CAX59014.1| ATP-dependent Clp protease adaptor protein [Erwinia billingiae Eb661] Length = 106 Score = 162 bits (411), Expect = 1e-38, Method: Composition-based stats. Identities = 48/107 (44%), Positives = 68/107 (63%), Gaps = 2/107 (1%) Query: 31 RMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETA 90 N F++ D ++R ++ P +Y+V+L ND+YTPMEFVI VLQ FF D E A Sbjct: 1 MANTNDWLNFEHLADDKLREG--LKPPSMYKVILNNDDYTPMEFVIDVLQKFFSYDTERA 58 Query: 91 KCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +ML VH+QG CGVY E+AE KV V Y+R++++PL C +E+ Sbjct: 59 TQLMLAVHYQGKAICGVYTAEVAETKVAHVNKYARENEHPLLCTLEK 105 >gi|163868096|ref|YP_001609300.1| ATP-dependent Clp protease adaptor protein ClpS [Bartonella tribocorum CIP 105476] gi|161017747|emb|CAK01305.1| Clp protease adaptor protein [Bartonella tribocorum CIP 105476] Length = 123 Score = 162 bits (411), Expect = 1e-38, Method: Composition-based stats. Identities = 57/107 (53%), Positives = 74/107 (69%) Query: 32 MNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAK 91 K E + + +K++ PKLYRVLL+ND+YTPM+FV+ VL+NFF K E A Sbjct: 17 EKGKNWDEGRHSAVIIPKARAKLQKPKLYRVLLLNDDYTPMDFVVFVLKNFFKKSFEEAT 76 Query: 92 CIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 IML VHH GIGECG Y YE+AEMK+ QV +RQ+++PLQC+ME K Sbjct: 77 RIMLNVHHNGIGECGTYTYEVAEMKIVQVRECARQNEHPLQCVMEWK 123 >gi|157962354|ref|YP_001502388.1| ATP-dependent Clp protease adaptor protein ClpS [Shewanella pealeana ATCC 700345] gi|189082480|sp|A8H5L6|CLPS_SHEPA RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|157847354|gb|ABV87853.1| ATP-dependent Clp protease adaptor protein ClpS [Shewanella pealeana ATCC 700345] Length = 102 Score = 162 bits (411), Expect = 1e-38, Method: Composition-based stats. Identities = 47/101 (46%), Positives = 70/101 (69%) Query: 37 IAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLK 96 ++ +N E S+++ P +Y+V+L ND+YTPM+FVI +LQ FF KD + A IML Sbjct: 1 MSRTENIEHVEESVESELKQPSMYKVILNNDDYTPMDFVIEILQLFFKKDEQQATEIMLA 60 Query: 97 VHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +HH+G G CG+Y + IAE KV QV ++RQ+Q+PL C +E+ Sbjct: 61 IHHKGKGICGIYPFGIAETKVAQVNQFARQNQHPLLCSLEE 101 >gi|304391581|ref|ZP_07373523.1| ATP-dependent Clp protease adapter protein ClpS 1 [Ahrensia sp. R2A130] gi|303295810|gb|EFL90168.1| ATP-dependent Clp protease adapter protein ClpS 1 [Ahrensia sp. R2A130] Length = 130 Score = 162 bits (411), Expect = 1e-38, Method: Composition-based stats. Identities = 54/99 (54%), Positives = 71/99 (71%) Query: 40 FDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHH 99 N R K++ P LYRVLL+ND++TPMEFVI +L FF + E A +ML VH Sbjct: 32 TGNDTGVITRTKPKLKKPSLYRVLLLNDDFTPMEFVIEILARFFQMNMEQATQVMLHVHQ 91 Query: 100 QGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 G+GECGVY YE+AE KV QVM+++R+HQ+PLQC+ME+K Sbjct: 92 NGVGECGVYTYEVAETKVTQVMDHARKHQHPLQCVMEKK 130 >gi|254786019|ref|YP_003073448.1| ATP-dependent Clp protease adaptor protein ClpS [Teredinibacter turnerae T7901] gi|237686070|gb|ACR13334.1| Sua5/YciO/YrdC/YwlC [Teredinibacter turnerae T7901] Length = 124 Score = 162 bits (411), Expect = 1e-38, Method: Composition-based stats. Identities = 44/102 (43%), Positives = 69/102 (67%), Gaps = 3/102 (2%) Query: 38 AEFDNCLDSEV---RFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIM 94 + D+ DS + +++ P +Y+V+L+ND+YTPMEFV+HVL++FF D E A +M Sbjct: 15 DDVDSGADSGLALQEAKPRLKKPPMYKVVLLNDDYTPMEFVVHVLESFFNMDREKATHVM 74 Query: 95 LKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIME 136 L VH +G CGVY+ ++AE K QV ++RQ+++PL C +E Sbjct: 75 LTVHTKGKAVCGVYSRDVAETKAMQVNQFARQNEHPLLCEIE 116 >gi|213424208|pdb|3DNJ|A Chain A, The Structure Of The Caulobacter Crescentus Clps Protease Adaptor Protein In Complex With A N-End Rule Peptide gi|213424209|pdb|3DNJ|B Chain B, The Structure Of The Caulobacter Crescentus Clps Protease Adaptor Protein In Complex With A N-End Rule Peptide gi|228312130|pdb|3G19|A Chain A, The Structure Of The Caulobacter Crescentus Clps Protease Adaptor Protein In Complex With Lll Tripeptide gi|228312330|pdb|3GQ0|A Chain A, The Structure Of The Caulobacter Crescentus Clps Protease Adaptor Protein - Apo Structure With No Peptide gi|228312331|pdb|3GQ0|B Chain B, The Structure Of The Caulobacter Crescentus Clps Protease Adaptor Protein - Apo Structure With No Peptide gi|229597899|pdb|3GQ1|A Chain A, The Structure Of The Caulobacter Crescentus Clps Protease Adaptor Protein In Complex With A Wlfvqrdske Decapeptide gi|229597900|pdb|3GQ1|B Chain B, The Structure Of The Caulobacter Crescentus Clps Protease Adaptor Protein In Complex With A Wlfvqrdske Decapeptide gi|229597907|pdb|3GW1|A Chain A, The Structure Of The Caulobacter Crescentus Clps Protease Adaptor Protein In Complex With Fgg Tripeptide gi|229597908|pdb|3GW1|B Chain B, The Structure Of The Caulobacter Crescentus Clps Protease Adaptor Protein In Complex With Fgg Tripeptide Length = 85 Score = 162 bits (411), Expect = 1e-38, Method: Composition-based stats. Identities = 50/84 (59%), Positives = 65/84 (77%) Query: 54 VRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIA 113 + P LYRVL++ND+YTPMEFV++VL+ FF K E A IML VH G+G CGVY YE+A Sbjct: 1 TQKPSLYRVLILNDDYTPMEFVVYVLERFFNKSREDATRIMLHVHQNGVGVCGVYTYEVA 60 Query: 114 EMKVNQVMNYSRQHQYPLQCIMEQ 137 E KV QV++ +R+HQ+PLQC ME+ Sbjct: 61 ETKVAQVIDSARRHQHPLQCTMEK 84 >gi|149913907|ref|ZP_01902439.1| ATP-dependent Clp protease, putative [Roseobacter sp. AzwK-3b] gi|149812191|gb|EDM72022.1| ATP-dependent Clp protease, putative [Roseobacter sp. AzwK-3b] Length = 107 Score = 162 bits (411), Expect = 1e-38, Method: Composition-based stats. Identities = 49/107 (45%), Positives = 72/107 (67%) Query: 32 MNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAK 91 M + V+ +K + P LY+VLL+ND+YTPMEFV+ VL+ FF +H A Sbjct: 1 MTGDDENGDEGDTSVVVKTRAKTKRPPLYKVLLLNDDYTPMEFVVAVLERFFGMNHAQAF 60 Query: 92 CIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 +ML VH +G+ GV+++EIAE KV QVM+++R+HQ+PLQC ME++ Sbjct: 61 EVMLTVHKKGVAVVGVFSHEIAETKVAQVMDFARRHQHPLQCTMEKE 107 >gi|254486976|ref|ZP_05100181.1| ATP-dependent Clp protease adaptor protein ClpS [Roseobacter sp. GAI101] gi|214043845|gb|EEB84483.1| ATP-dependent Clp protease adaptor protein ClpS [Roseobacter sp. GAI101] Length = 113 Score = 162 bits (411), Expect = 1e-38, Method: Composition-based stats. Identities = 51/112 (45%), Positives = 75/112 (66%) Query: 27 MADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKD 86 M + G D+ D + K + P LY+V+L+ND++TPMEFV+HVL+ FF + Sbjct: 1 MRLDDLMMAGKDRDDDETDLLTKTKPKTKRPPLYKVMLLNDDFTPMEFVVHVLERFFGLN 60 Query: 87 HETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 H A IML VH +G+ GV+++EIAE KV QVM+++R+HQ+PLQC ME++ Sbjct: 61 HAQAFEIMLTVHKKGLAVVGVFSHEIAETKVAQVMDFARRHQHPLQCTMEKE 112 >gi|212634694|ref|YP_002311219.1| ATP-dependent Clp protease adaptor protein ClpS [Shewanella piezotolerans WP3] gi|226706569|sp|B8CLI1|CLPS_SHEPW RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|212556178|gb|ACJ28632.1| ATP-dependent Clp protease adaptor protein ClpS [Shewanella piezotolerans WP3] Length = 102 Score = 162 bits (411), Expect = 1e-38, Method: Composition-based stats. Identities = 46/101 (45%), Positives = 69/101 (68%) Query: 37 IAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLK 96 ++ +N E S+++ P +Y+V+L ND+YTPM+FVI +LQ FF KD A IML Sbjct: 1 MSRTENIEHVEESVESELKQPSMYKVILNNDDYTPMDFVIEILQLFFRKDEAQATEIMLA 60 Query: 97 VHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +HH+G G CG+Y + IAE KV QV ++RQ+++PL C +E+ Sbjct: 61 IHHKGKGICGIYPFGIAETKVAQVNQFARQNEHPLLCSLEE 101 >gi|50084541|ref|YP_046051.1| ATP-dependent Clp protease adaptor protein ClpS [Acinetobacter sp. ADP1] gi|49530517|emb|CAG68229.1| substrate modulator for ClpAP, directs protease activity towards aggregated proteins [Acinetobacter sp. ADP1] Length = 137 Score = 162 bits (410), Expect = 1e-38, Method: Composition-based stats. Identities = 44/110 (40%), Positives = 67/110 (60%), Gaps = 1/110 (0%) Query: 29 DSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHE 88 + R+ E + + + +++ P LY V+L+ND+YTPM+FVI +LQ +F + + Sbjct: 28 NPRLGDSQSDEPEGDIAVQT-APPELKRPPLYAVVLLNDDYTPMDFVIEILQQYFALNLD 86 Query: 89 TAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 A +ML VH++G G GVY +IAE K NQV NY+R +PL C +E K Sbjct: 87 QATQVMLTVHYEGKGVAGVYPRDIAETKANQVNNYARSQGHPLLCQIEPK 136 >gi|10442011|gb|AAG17283.1|AF254897_2 YljA [Bradyrhizobium japonicum USDA 110] Length = 97 Score = 162 bits (410), Expect = 2e-38, Method: Composition-based stats. Identities = 58/91 (63%), Positives = 73/91 (80%) Query: 48 VRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGV 107 + K + P LYRVL++ND+YTPMEFV+HVL+ FF KD E A IML VHH GIGECGV Sbjct: 7 TKVKPKTKRPNLYRVLILNDDYTPMEFVVHVLEKFFQKDVEAATKIMLHVHHHGIGECGV 66 Query: 108 YAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 + YEIAE KV QVM+++R+HQ+PLQC+ME+K Sbjct: 67 FTYEIAETKVTQVMDFARKHQHPLQCVMEKK 97 >gi|291616886|ref|YP_003519628.1| ClpS [Pantoea ananatis LMG 20103] gi|291151916|gb|ADD76500.1| ClpS [Pantoea ananatis LMG 20103] gi|327393314|dbj|BAK10736.1| ATP-dependent Clp protease adaptor protein ClpS [Pantoea ananatis AJ13355] Length = 106 Score = 162 bits (410), Expect = 2e-38, Method: Composition-based stats. Identities = 49/107 (45%), Positives = 66/107 (61%), Gaps = 2/107 (1%) Query: 31 RMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETA 90 N F+ D +VR ++ P +Y+V+L ND+YTPMEFVI VLQ FF D E A Sbjct: 1 MANTNDWLNFEQLADDKVREG--LKPPSMYKVILNNDDYTPMEFVIDVLQKFFSYDIERA 58 Query: 91 KCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +MLKVH+ G CGV+ E+AE K QV NY+R + +PL C +E+ Sbjct: 59 TQLMLKVHYHGKAICGVFTAEVAETKAAQVNNYARDNHHPLLCTLEK 105 >gi|152969471|ref|YP_001334580.1| ATP-dependent Clp protease adaptor protein ClpS [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|206576057|ref|YP_002239467.1| ATP-dependent Clp protease adaptor protein ClpS [Klebsiella pneumoniae 342] gi|238893943|ref|YP_002918677.1| ATP-dependent Clp protease adaptor protein ClpS [Klebsiella pneumoniae NTUH-K2044] gi|288936315|ref|YP_003440374.1| ATP-dependent Clp protease adaptor protein ClpS [Klebsiella variicola At-22] gi|290510629|ref|ZP_06549999.1| ATP-dependent Clp protease adaptor protein ClpS [Klebsiella sp. 1_1_55] gi|329998510|ref|ZP_08303132.1| ATP-dependent Clp protease adaptor protein ClpS [Klebsiella sp. MS 92-3] gi|166214736|sp|A6T6X9|CLPS_KLEP7 RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|238066652|sp|B5XYB2|CLPS_KLEP3 RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|150954320|gb|ABR76350.1| ATP-dependent Clp protease adaptor protein ClpS [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|206565115|gb|ACI06891.1| ATP-dependent Clp protease adaptor protein ClpS [Klebsiella pneumoniae 342] gi|238546259|dbj|BAH62610.1| ATP-dependent Clp protease adaptor protein [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] gi|288891024|gb|ADC59342.1| ATP-dependent Clp protease adaptor protein ClpS [Klebsiella variicola At-22] gi|289777345|gb|EFD85343.1| ATP-dependent Clp protease adaptor protein ClpS [Klebsiella sp. 1_1_55] gi|328538655|gb|EGF64752.1| ATP-dependent Clp protease adaptor protein ClpS [Klebsiella sp. MS 92-3] Length = 105 Score = 162 bits (410), Expect = 2e-38, Method: Composition-based stats. Identities = 50/106 (47%), Positives = 74/106 (69%), Gaps = 2/106 (1%) Query: 32 MNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAK 91 M+K+ +F++ +D EVR ++ P +Y+V+LVND+YTPMEFVI VLQ FF D E A Sbjct: 1 MSKRDWLDFEHLVDDEVR--DAIKPPSMYKVILVNDDYTPMEFVIDVLQKFFSYDVERAT 58 Query: 92 CIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +ML VH++G CGV+ E+AE KV V Y+R++++PL C +E+ Sbjct: 59 QLMLTVHYEGKAICGVFTAEVAETKVAMVNQYARENEHPLLCTLEK 104 >gi|117925058|ref|YP_865675.1| ATP-dependent Clp protease adaptor protein ClpS [Magnetococcus sp. MC-1] gi|117608814|gb|ABK44269.1| ATP-dependent Clp protease adaptor protein ClpS [Magnetococcus sp. MC-1] Length = 113 Score = 162 bits (410), Expect = 2e-38, Method: Composition-based stats. Identities = 48/109 (44%), Positives = 69/109 (63%), Gaps = 4/109 (3%) Query: 33 NKKGIAEFDNCLDSEVRFSSKV----RVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHE 88 N G D+ +D + + + R P +YRV+L+ND++TPMEFV+ +L +FF K E Sbjct: 4 NCSGPTMSDHNIDHDTSVAVHLDVVVREPPMYRVVLLNDDFTPMEFVVELLMHFFRKTAE 63 Query: 89 TAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 A IML +HH+G+G CG Y EIAE KV QV ++R + +PL+C ME Sbjct: 64 QATQIMLNIHHEGVGVCGTYPREIAETKVAQVHQHARTNGHPLKCRMEP 112 >gi|56698476|ref|YP_168851.1| ATP-dependent Clp protease, adaptor protein ClpS [Ruegeria pomeroyi DSS-3] gi|67460174|sp|Q5LMA7|CLPS_SILPO RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|56680213|gb|AAV96879.1| ATP-dependent Clp protease, adaptor protein ClpS [Ruegeria pomeroyi DSS-3] Length = 113 Score = 162 bits (410), Expect = 2e-38, Method: Composition-based stats. Identities = 50/112 (44%), Positives = 74/112 (66%) Query: 27 MADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKD 86 M + DN ++ + + P LY+VLL+ND+YTPMEFV+HVL+ FF + Sbjct: 1 MTAQLHMMSDKHDQDNDASVLLQTRPRTKRPPLYKVLLLNDDYTPMEFVVHVLERFFGMN 60 Query: 87 HETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 H A IML VH +G+ GV+++EIAE KV+ VM+++R+HQ+PLQC ME++ Sbjct: 61 HAQAFEIMLTVHKKGVAVVGVFSHEIAETKVSLVMDFARRHQHPLQCTMEKE 112 >gi|237809064|ref|YP_002893504.1| ATP-dependent Clp protease adaptor protein ClpS [Tolumonas auensis DSM 9187] gi|237501325|gb|ACQ93918.1| ATP-dependent Clp protease adaptor protein ClpS [Tolumonas auensis DSM 9187] Length = 104 Score = 162 bits (410), Expect = 2e-38, Method: Composition-based stats. Identities = 47/102 (46%), Positives = 68/102 (66%) Query: 36 GIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIML 95 G + ++++ P +Y+V+L+ND+YTPM+FV+ VLQ FF D E A +ML Sbjct: 2 GKTRVSPTPGTAAESKTEIQPPSMYKVVLLNDDYTPMDFVVEVLQRFFRMDLEKATQVML 61 Query: 96 KVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 VH+ G G CGVY +IAE KV+QV +Y+R+H++PL C MEQ Sbjct: 62 AVHYDGKGICGVYTADIAETKVDQVNHYARKHEHPLLCTMEQ 103 >gi|256822682|ref|YP_003146645.1| ATP-dependent Clp protease adaptor protein ClpS [Kangiella koreensis DSM 16069] gi|256796221|gb|ACV26877.1| ATP-dependent Clp protease adaptor protein ClpS [Kangiella koreensis DSM 16069] Length = 115 Score = 161 bits (409), Expect = 2e-38, Method: Composition-based stats. Identities = 47/110 (42%), Positives = 71/110 (64%), Gaps = 1/110 (0%) Query: 29 DSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHE 88 D N+ E ++ L K++ P +Y+VL++ND+YTPM+FV+ VL+ FF D E Sbjct: 4 DQNHNQNHDHEHEHGLAVA-DAKPKLKQPPMYKVLILNDDYTPMDFVVDVLRKFFTMDTE 62 Query: 89 TAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 A +ML+VHH+G G CG + +IAE KV QV ++R +Q+PL C+ME + Sbjct: 63 QATRVMLQVHHEGQGVCGTFTPDIAETKVVQVNEFARANQHPLLCVMEPE 112 >gi|83855083|ref|ZP_00948613.1| ATP-dependent Clp protease, adaptor protein ClpS [Sulfitobacter sp. NAS-14.1] gi|83941607|ref|ZP_00954069.1| ATP-dependent Clp protease, adaptor protein ClpS [Sulfitobacter sp. EE-36] gi|83842926|gb|EAP82093.1| ATP-dependent Clp protease, adaptor protein ClpS [Sulfitobacter sp. NAS-14.1] gi|83847427|gb|EAP85302.1| ATP-dependent Clp protease, adaptor protein ClpS [Sulfitobacter sp. EE-36] Length = 113 Score = 161 bits (409), Expect = 2e-38, Method: Composition-based stats. Identities = 50/112 (44%), Positives = 74/112 (66%) Query: 27 MADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKD 86 M + G D+ D + K + P LY+V+L+ND++TPMEFV+ VL+ FF + Sbjct: 1 MRLDDLMMAGKDRDDDETDLLTKTKPKTKRPPLYKVMLLNDDFTPMEFVVIVLERFFGLN 60 Query: 87 HETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 H A IML VH +G+ GV+++EIAE KV QVM+++R+HQ+PLQC ME++ Sbjct: 61 HAQAFEIMLTVHKKGLAVVGVFSHEIAETKVAQVMDFARRHQHPLQCTMEKE 112 >gi|238792421|ref|ZP_04636055.1| ATP-dependent Clp protease adapter protein clpS [Yersinia intermedia ATCC 29909] gi|238728347|gb|EEQ19867.1| ATP-dependent Clp protease adapter protein clpS [Yersinia intermedia ATCC 29909] Length = 106 Score = 161 bits (409), Expect = 2e-38, Method: Composition-based stats. Identities = 45/105 (42%), Positives = 66/105 (62%), Gaps = 2/105 (1%) Query: 33 NKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKC 92 N F++ + + ++ P +Y+V+L ND+YTPMEFVI VLQ FF D E A Sbjct: 3 NNNDWLNFEHLVKD--KQKEALKPPSMYKVILNNDDYTPMEFVIDVLQKFFSYDIERATQ 60 Query: 93 IMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +ML VH+QG CGV+ E+AE KV V Y+R++++PL C +E+ Sbjct: 61 LMLNVHYQGKAICGVFTAEVAETKVAHVNQYARENEHPLLCTLEK 105 >gi|84500364|ref|ZP_00998613.1| ATP-dependent Clp protease, adaptor protein ClpS [Oceanicola batsensis HTCC2597] gi|84391317|gb|EAQ03649.1| ATP-dependent Clp protease, adaptor protein ClpS [Oceanicola batsensis HTCC2597] Length = 121 Score = 161 bits (409), Expect = 2e-38, Method: Composition-based stats. Identities = 49/90 (54%), Positives = 67/90 (74%) Query: 49 RFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVY 108 K + P LY+VLL+ND+YTPMEFV+ VL+ FF +H A IML VH +G+ GV+ Sbjct: 32 ETRPKTKRPPLYKVLLLNDDYTPMEFVVAVLERFFGMNHAQAFEIMLTVHKKGVAVVGVF 91 Query: 109 AYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 ++EIAE KV QVM+++RQHQ+PLQC ME++ Sbjct: 92 SHEIAETKVAQVMDFARQHQHPLQCTMEKE 121 >gi|78047604|ref|YP_363779.1| ATP-dependent Clp protease adaptor protein ClpS [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|78036034|emb|CAJ23725.1| ATP-dependent Clp protease adaptor protein ClpS [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 128 Score = 161 bits (408), Expect = 3e-38, Method: Composition-based stats. Identities = 51/110 (46%), Positives = 69/110 (62%), Gaps = 1/110 (0%) Query: 29 DSRMNKKGIAEFDNCLDSEVR-FSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDH 87 + RM + E ++ V +V P Y+VLL+ND+YTPM+FV+ VL+ FF + Sbjct: 18 NGRMPRNTSHEHEHDHGLMVEASKPEVAPPPRYQVLLLNDDYTPMDFVVTVLEQFFNLNL 77 Query: 88 ETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 E A IML VH +G G CGVY+ E+AE KV QV +SR +Q+PL C MEQ Sbjct: 78 EQATQIMLHVHTRGRGVCGVYSREVAESKVAQVNEFSRMNQHPLLCTMEQ 127 >gi|163751226|ref|ZP_02158454.1| hypothetical protein KT99_13792 [Shewanella benthica KT99] gi|161328940|gb|EDQ00014.1| hypothetical protein KT99_13792 [Shewanella benthica KT99] Length = 102 Score = 161 bits (408), Expect = 3e-38, Method: Composition-based stats. Identities = 47/101 (46%), Positives = 69/101 (68%) Query: 37 IAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLK 96 + + N E R S++ P +Y+V+L ND+YTPM+FVI +LQ FF K+ + A IML Sbjct: 1 MGKVGNIEHVEERVESELMPPSMYKVVLNNDDYTPMDFVIEILQLFFKKNEQEATDIMLA 60 Query: 97 VHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +HHQG G CGV+ + IAE KV QV ++RQ+++PL C +E+ Sbjct: 61 IHHQGKGICGVFPFGIAETKVAQVNQFARQNEHPLLCSLEK 101 >gi|157375024|ref|YP_001473624.1| ATP-dependent Clp protease adaptor protein ClpS [Shewanella sediminis HAW-EB3] gi|189082481|sp|A8FUH3|CLPS_SHESH RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|157317398|gb|ABV36496.1| ATP-dependent Clp protease adaptor protein ClpS [Shewanella sediminis HAW-EB3] Length = 102 Score = 161 bits (408), Expect = 3e-38, Method: Composition-based stats. Identities = 48/96 (50%), Positives = 67/96 (69%) Query: 42 NCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQG 101 N E R S++ P +Y+V+L ND+YTPM+FVI VLQ FF K+ + A IML +H+QG Sbjct: 6 NIEHVEERVESELMPPPMYKVILNNDDYTPMDFVIEVLQLFFKKNEQDATDIMLAIHNQG 65 Query: 102 IGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 G CGV+ + IAE KV QV ++RQ+Q+PL C +E+ Sbjct: 66 KGICGVFPFGIAETKVAQVNQFARQNQHPLLCSLEK 101 >gi|310815392|ref|YP_003963356.1| ATP-dependent Clp protease adaptor protein clpS [Ketogulonicigenium vulgare Y25] gi|308754127|gb|ADO42056.1| ATP-dependent Clp protease adaptor protein clpS [Ketogulonicigenium vulgare Y25] Length = 117 Score = 161 bits (408), Expect = 3e-38, Method: Composition-based stats. Identities = 51/118 (43%), Positives = 72/118 (61%), Gaps = 1/118 (0%) Query: 21 LMSFIFMADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQ 80 + M S N G +N ++ K + P LY+V+L+ND+YTPMEFV+ VLQ Sbjct: 1 MGGTTRMTSSNDND-GTNTPENERGVALKTRPKTKRPPLYKVMLLNDDYTPMEFVVLVLQ 59 Query: 81 NFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 FF D + IML VH +G+ V+ YE+AE KV QVM ++R++Q+PLQC MEQ+ Sbjct: 60 RFFSLDESRSVEIMLAVHTKGVAVVAVFPYEVAETKVAQVMEFARRNQHPLQCTMEQE 117 >gi|328543445|ref|YP_004303554.1| ATP-dependent Clp protease adaptor protein ClpS [Polymorphum gilvum SL003B-26A1] gi|326413189|gb|ADZ70252.1| ATP-dependent Clp protease adaptor protein ClpS [Polymorphum gilvum SL003B-26A1] Length = 109 Score = 161 bits (408), Expect = 3e-38, Method: Composition-based stats. Identities = 57/100 (57%), Positives = 75/100 (75%) Query: 39 EFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVH 98 + D + + + P LYRVLL+ND+YTPMEFVIHV++ FF K+ E A IML VH Sbjct: 10 DADAGTVVVPKTRTVTKRPNLYRVLLLNDDYTPMEFVIHVVERFFQKNREEATRIMLHVH 69 Query: 99 HQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 H G+GECGVY YE+AE KV QVM+++R+HQ+PLQC+ME+K Sbjct: 70 HHGVGECGVYTYEVAETKVTQVMDFARKHQHPLQCVMEKK 109 >gi|224824763|ref|ZP_03697870.1| ATP-dependent Clp protease adaptor protein ClpS [Lutiella nitroferrum 2002] gi|224603256|gb|EEG09432.1| ATP-dependent Clp protease adaptor protein ClpS [Lutiella nitroferrum 2002] Length = 102 Score = 161 bits (408), Expect = 3e-38, Method: Composition-based stats. Identities = 47/87 (54%), Positives = 68/87 (78%) Query: 51 SSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAY 110 +K R P +Y+VLL+ND+YTPM+FV+ +LQ+FF+K+ E A IML+VH QG G CGVY Sbjct: 15 RAKTRPPSMYKVLLLNDDYTPMDFVVQILQHFFHKNREQATSIMLQVHTQGRGVCGVYTK 74 Query: 111 EIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 ++A KV QV+ +++ HQ+PLQC+ME+ Sbjct: 75 DVAATKVEQVLQFAKAHQHPLQCVMEE 101 >gi|228312133|pdb|3G1B|A Chain A, The Structure Of The M53a Mutant Of Caulobacter Crescentus Clps Protease Adaptor Protein In Complex With Wlfvqrdske Peptide gi|228312134|pdb|3G1B|B Chain B, The Structure Of The M53a Mutant Of Caulobacter Crescentus Clps Protease Adaptor Protein In Complex With Wlfvqrdske Peptide gi|290789973|pdb|3G3P|A Chain A, The Structure Of The M53a Mutant Of The Caulobacter Crescentus Clps In Complex With A Peptide Containing An Amino-Terminal Norleucine Residue gi|290789974|pdb|3G3P|B Chain B, The Structure Of The M53a Mutant Of The Caulobacter Crescentus Clps In Complex With A Peptide Containing An Amino-Terminal Norleucine Residue Length = 85 Score = 161 bits (408), Expect = 3e-38, Method: Composition-based stats. Identities = 49/84 (58%), Positives = 64/84 (76%) Query: 54 VRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIA 113 + P LYRVL++ND+YTP EFV++VL+ FF K E A IML VH G+G CGVY YE+A Sbjct: 1 TQKPSLYRVLILNDDYTPAEFVVYVLERFFNKSREDATRIMLHVHQNGVGVCGVYTYEVA 60 Query: 114 EMKVNQVMNYSRQHQYPLQCIMEQ 137 E KV QV++ +R+HQ+PLQC ME+ Sbjct: 61 ETKVAQVIDSARRHQHPLQCTMEK 84 >gi|218548404|ref|YP_002382195.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia fergusonii ATCC 35469] gi|226706568|sp|B7LN49|CLPS_ESCF3 RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|218355945|emb|CAQ88560.1| regulatory protein for ClpA substrate specificity [Escherichia fergusonii ATCC 35469] gi|324113823|gb|EGC07798.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia fergusonii B253] gi|325496825|gb|EGC94684.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia fergusonii ECD227] Length = 106 Score = 161 bits (408), Expect = 3e-38, Method: Composition-based stats. Identities = 49/107 (45%), Positives = 70/107 (65%), Gaps = 2/107 (1%) Query: 31 RMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETA 90 +FD + +VR + ++ P +Y+V+LVND+YTPMEFVI VLQ FF D E A Sbjct: 1 MSKTNDWLDFDQLAEDKVRDA--LKPPSMYKVILVNDDYTPMEFVIDVLQKFFSYDVERA 58 Query: 91 KCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +ML VH+QG CGV+ E+AE KV V NY+R++++PL C +E+ Sbjct: 59 TQLMLTVHYQGKAICGVFTAEVAETKVAMVNNYARENEHPLLCTLEK 105 >gi|238757595|ref|ZP_04618779.1| ATP-dependent Clp protease adapter protein clpS [Yersinia aldovae ATCC 35236] gi|238704100|gb|EEP96633.1| ATP-dependent Clp protease adapter protein clpS [Yersinia aldovae ATCC 35236] Length = 106 Score = 161 bits (408), Expect = 3e-38, Method: Composition-based stats. Identities = 45/105 (42%), Positives = 67/105 (63%), Gaps = 2/105 (1%) Query: 33 NKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKC 92 N F++ + ++ ++ P +Y+V+L ND+YTPMEFVI VLQ FF D E A Sbjct: 3 NNNDWLNFEHLVKD--KYKEALKPPSMYKVILNNDDYTPMEFVIDVLQKFFSYDIERATQ 60 Query: 93 IMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +ML VH+QG CGV+ E+AE KV V Y+R++++PL C +E+ Sbjct: 61 LMLNVHYQGKAICGVFTAEVAETKVAHVNQYARENEHPLLCTLEK 105 >gi|253999942|ref|YP_003052005.1| ATP-dependent Clp protease adaptor protein ClpS [Methylovorus sp. SIP3-4] gi|253986621|gb|ACT51478.1| ATP-dependent Clp protease adaptor protein ClpS [Methylovorus sp. SIP3-4] Length = 103 Score = 161 bits (408), Expect = 3e-38, Method: Composition-based stats. Identities = 49/90 (54%), Positives = 70/90 (77%) Query: 48 VRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGV 107 + +++ + P +Y+V+L+ND+YTPMEFV+ V+Q FF K E A IMLKVH +G G CGV Sbjct: 13 EKQTARPKPPSMYKVILLNDDYTPMEFVVEVIQRFFNKSREQATQIMLKVHTEGAGICGV 72 Query: 108 YAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 Y ++IAE KVNQV+ Y+R++Q+PLQC ME+ Sbjct: 73 YPHDIAETKVNQVLGYAREYQHPLQCAMEE 102 >gi|21242744|ref|NP_642326.1| ATP-dependent Clp protease adaptor protein ClpS [Xanthomonas axonopodis pv. citri str. 306] gi|84624070|ref|YP_451442.1| ATP-dependent Clp protease adaptor protein ClpS [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|289666027|ref|ZP_06487608.1| ATP-dependent Clp protease adaptor protein ClpS [Xanthomonas campestris pv. vasculorum NCPPB702] gi|289670485|ref|ZP_06491560.1| ATP-dependent Clp protease adaptor protein ClpS [Xanthomonas campestris pv. musacearum NCPPB4381] gi|294625258|ref|ZP_06703897.1| ATP-dependent Clp protease adaptor protein ClpS [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|294666594|ref|ZP_06731833.1| ATP-dependent Clp protease adaptor protein ClpS [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|24638421|sp|Q8PL06|CLPS_XANAC RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|67460158|sp|Q5GZR3|CLPS_XANOR RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|123521875|sp|Q2P2Q9|CLPS_XANOM RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|21108222|gb|AAM36862.1| conserved hypothetical protein [Xanthomonas axonopodis pv. citri str. 306] gi|84368010|dbj|BAE69168.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|292600432|gb|EFF44530.1| ATP-dependent Clp protease adaptor protein ClpS [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292603614|gb|EFF47026.1| ATP-dependent Clp protease adaptor protein ClpS [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 106 Score = 161 bits (408), Expect = 3e-38, Method: Composition-based stats. Identities = 52/106 (49%), Positives = 68/106 (64%), Gaps = 1/106 (0%) Query: 32 MNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAK 91 M + E D+ L E +V P Y+VLL+ND+YTPM+FV+ VL+ FF + E A Sbjct: 1 MPRNTSHEHDHGLMVE-ASKPEVAPPPRYQVLLLNDDYTPMDFVVTVLEQFFNLNLEQAT 59 Query: 92 CIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 IML VH +G G CGVY+ E+AE KV QV +SR +Q+PL C MEQ Sbjct: 60 QIMLHVHTRGRGVCGVYSREVAESKVAQVNEFSRMNQHPLLCTMEQ 105 >gi|325919554|ref|ZP_08181568.1| hypothetical protein XGA_0507 [Xanthomonas gardneri ATCC 19865] gi|325549963|gb|EGD20803.1| hypothetical protein XGA_0507 [Xanthomonas gardneri ATCC 19865] Length = 106 Score = 161 bits (407), Expect = 4e-38, Method: Composition-based stats. Identities = 51/106 (48%), Positives = 68/106 (64%), Gaps = 1/106 (0%) Query: 32 MNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAK 91 M + E+D+ L E +V P Y+VLL+ND+YTPM+FV+ VL+ FF E A Sbjct: 1 MPRNTTHEYDHGLMVE-ASKPEVAPPPRYQVLLLNDDYTPMDFVVTVLEQFFNLSLEQAT 59 Query: 92 CIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +ML VH +G G CGVY+ E+AE KV QV +SR +Q+PL C MEQ Sbjct: 60 QVMLHVHTRGRGVCGVYSREVAESKVAQVNEFSRMNQHPLLCTMEQ 105 >gi|294140597|ref|YP_003556575.1| ATP-dependent Clp protease adaptor protein clpS [Shewanella violacea DSS12] gi|293327066|dbj|BAJ01797.1| ATP-dependent Clp protease adaptor protein clpS [Shewanella violacea DSS12] Length = 102 Score = 161 bits (407), Expect = 4e-38, Method: Composition-based stats. Identities = 46/101 (45%), Positives = 69/101 (68%) Query: 37 IAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLK 96 + + N E R S++ P +Y+V+L ND+YTPM+FVI +LQ FF K+ + A IML Sbjct: 1 MGKVGNLEHVEERVESELMPPSMYKVVLNNDDYTPMDFVIEILQFFFKKNEQEATDIMLA 60 Query: 97 VHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +HHQG G CG++ + IAE KV QV ++RQ+++PL C +E+ Sbjct: 61 IHHQGKGICGIFPFGIAETKVAQVNQFARQNEHPLLCSLEK 101 >gi|91793189|ref|YP_562840.1| ATP-dependent Clp protease adaptor protein ClpS [Shewanella denitrificans OS217] gi|122968755|sp|Q12N59|CLPS_SHEDO RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|91715191|gb|ABE55117.1| ATP-dependent Clp protease adaptor protein ClpS [Shewanella denitrificans OS217] Length = 102 Score = 161 bits (407), Expect = 4e-38, Method: Composition-based stats. Identities = 46/101 (45%), Positives = 67/101 (66%) Query: 37 IAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLK 96 + + + ++ R S++ P +Y+V+L ND+YTPM+FVI VL FF K A IML Sbjct: 1 MGKTGSVEHTKQRIESELMPPSMYKVILNNDDYTPMDFVIEVLARFFDKHEPQATDIMLT 60 Query: 97 VHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +HHQG G CGVY + IAE KV QV ++R++Q+PL C +E+ Sbjct: 61 IHHQGKGICGVYPFGIAETKVLQVNQFARENQHPLLCTLEK 101 >gi|227112014|ref|ZP_03825670.1| ATP-dependent Clp protease adaptor protein ClpS [Pectobacterium carotovorum subsp. brasiliensis PBR1692] gi|253688098|ref|YP_003017288.1| ATP-dependent Clp protease adaptor protein ClpS [Pectobacterium carotovorum subsp. carotovorum PC1] gi|261821257|ref|YP_003259363.1| ATP-dependent Clp protease adaptor protein ClpS [Pectobacterium wasabiae WPP163] gi|259491248|sp|C6DF43|CLPS_PECCP RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|251754676|gb|ACT12752.1| ATP-dependent Clp protease adaptor protein ClpS [Pectobacterium carotovorum subsp. carotovorum PC1] gi|261605270|gb|ACX87756.1| ATP-dependent Clp protease adaptor protein ClpS [Pectobacterium wasabiae WPP163] Length = 106 Score = 161 bits (407), Expect = 4e-38, Method: Composition-based stats. Identities = 47/105 (44%), Positives = 69/105 (65%), Gaps = 2/105 (1%) Query: 33 NKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKC 92 N ++ +N + + K++ P +Y V+L ND+YTPMEFVI VLQ FF D E A Sbjct: 3 NNSTWSQSENL--TADKQKEKLQPPSMYNVVLNNDDYTPMEFVIDVLQKFFSYDIERATQ 60 Query: 93 IMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +ML VH+QG CGV++ E+AE KV QV Y+R++++PL C +E+ Sbjct: 61 LMLTVHYQGKAICGVFSAEVAETKVVQVNRYARENEHPLLCTLEK 105 >gi|146307417|ref|YP_001187882.1| ATP-dependent Clp protease adaptor protein ClpS [Pseudomonas mendocina ymp] gi|166214739|sp|A4XUY4|CLPS_PSEMY RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|145575618|gb|ABP85150.1| ATP-dependent Clp protease adaptor protein ClpS [Pseudomonas mendocina ymp] Length = 120 Score = 161 bits (407), Expect = 4e-38, Method: Composition-based stats. Identities = 43/106 (40%), Positives = 63/106 (59%) Query: 32 MNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAK 91 + E D+ + ++ P +Y+V+L ND+YTPM+FV+ VL+ FF + E A Sbjct: 13 QDHPAEHEDDSSGIAVQESKPALQAPPMYKVVLFNDDYTPMDFVVEVLETFFGMNRELAT 72 Query: 92 CIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 IML VH +G CGVY +IAE K QV Y+R+ Q+PL C +E+ Sbjct: 73 KIMLTVHTEGRAVCGVYTRDIAETKAMQVNQYARESQHPLLCEIEK 118 >gi|74317254|ref|YP_314994.1| ATP-dependent Clp protease adaptor protein ClpS [Thiobacillus denitrificans ATCC 25259] gi|74056749|gb|AAZ97189.1| ATP-dependent Clp protease adaptor protein ClpS [Thiobacillus denitrificans ATCC 25259] Length = 102 Score = 161 bits (407), Expect = 4e-38, Method: Composition-based stats. Identities = 52/86 (60%), Positives = 69/86 (80%) Query: 52 SKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYE 111 +KV+ P LY+VLL+ND+YTPMEFV+HVL+ FF D E A IMLKVH +G+G CGV+ + Sbjct: 16 AKVKPPPLYKVLLLNDDYTPMEFVVHVLRKFFGIDEERATQIMLKVHTEGVGVCGVFTRD 75 Query: 112 IAEMKVNQVMNYSRQHQYPLQCIMEQ 137 IA KV QV++++RQHQ+PLQC ME+ Sbjct: 76 IAHTKVEQVVDFARQHQHPLQCTMEE 101 >gi|262041017|ref|ZP_06014237.1| ATP-dependent Clp protease adaptor protein ClpS [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259041633|gb|EEW42684.1| ATP-dependent Clp protease adaptor protein ClpS [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 105 Score = 160 bits (406), Expect = 4e-38, Method: Composition-based stats. Identities = 49/106 (46%), Positives = 73/106 (68%), Gaps = 2/106 (1%) Query: 32 MNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAK 91 M+K+ +F++ +D EVR ++ P +Y+V+ VND+YTPMEFVI VLQ FF D E A Sbjct: 1 MSKRDWLDFEHLVDDEVR--DAIKPPSMYKVIFVNDDYTPMEFVIDVLQKFFSYDVERAT 58 Query: 92 CIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +ML VH++G CGV+ E+AE KV V Y+R++++PL C +E+ Sbjct: 59 QLMLTVHYEGKAICGVFTAEVAETKVAMVNQYARENEHPLLCTLEK 104 >gi|227329247|ref|ZP_03833271.1| ATP-dependent Clp protease adaptor protein ClpS [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 106 Score = 160 bits (406), Expect = 5e-38, Method: Composition-based stats. Identities = 47/105 (44%), Positives = 69/105 (65%), Gaps = 2/105 (1%) Query: 33 NKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKC 92 N ++ +N + + K++ P +Y V+L ND+YTPMEFVI VLQ FF D E A Sbjct: 3 NNSTWSQSENL--TTDKQKEKLQPPSMYNVVLNNDDYTPMEFVIDVLQKFFSYDIERATQ 60 Query: 93 IMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +ML VH+QG CGV++ E+AE KV QV Y+R++++PL C +E+ Sbjct: 61 LMLTVHYQGKAICGVFSAEVAETKVVQVNRYARENEHPLLCTLEK 105 >gi|67460271|sp|Q6FCI2|CLPS_ACIAD RecName: Full=ATP-dependent Clp protease adapter protein ClpS Length = 107 Score = 160 bits (406), Expect = 5e-38, Method: Composition-based stats. Identities = 44/107 (41%), Positives = 65/107 (60%), Gaps = 1/107 (0%) Query: 32 MNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAK 91 M E + + + +++ P LY V+L+ND+YTPM+FVI +LQ +F + + A Sbjct: 1 MGDSQSDEPEGDIAVQT-APPELKRPPLYAVVLLNDDYTPMDFVIEILQQYFALNLDQAT 59 Query: 92 CIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 +ML VH++G G GVY +IAE K NQV NY+R +PL C +E K Sbjct: 60 QVMLTVHYEGKGVAGVYPRDIAETKANQVNNYARSQGHPLLCQIEPK 106 >gi|156934623|ref|YP_001438539.1| ATP-dependent Clp protease adaptor protein ClpS [Cronobacter sakazakii ATCC BAA-894] gi|260597283|ref|YP_003209854.1| ATP-dependent Clp protease adaptor protein ClpS [Cronobacter turicensis z3032] gi|166214735|sp|A7MEQ8|CLPS_ENTS8 RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|156532877|gb|ABU77703.1| hypothetical protein ESA_02457 [Cronobacter sakazakii ATCC BAA-894] gi|260216460|emb|CBA29592.1| ATP-dependent Clp protease adapter protein clpS [Cronobacter turicensis z3032] Length = 106 Score = 160 bits (406), Expect = 5e-38, Method: Composition-based stats. Identities = 47/107 (43%), Positives = 70/107 (65%), Gaps = 2/107 (1%) Query: 31 RMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETA 90 K +FD+ + ++R + ++ P +Y+V+L+ND+YTPMEFVI VLQ FF D E A Sbjct: 1 MSKDKSWLDFDHLAEDDLREA--LKPPSMYKVILMNDDYTPMEFVIDVLQKFFSYDVERA 58 Query: 91 KCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +ML VH+QG CGV+ E+AE KV V Y+R++ +PL C +E+ Sbjct: 59 TQLMLTVHYQGKAICGVFTAEVAETKVALVNKYARENDHPLLCTLEK 105 >gi|88798703|ref|ZP_01114286.1| substrate modulator for ClpAP, directs protease activity towards aggregated proteins [Reinekea sp. MED297] gi|88778466|gb|EAR09658.1| substrate modulator for ClpAP, directs protease activity towards aggregated proteins [Reinekea sp. MED297] Length = 113 Score = 160 bits (406), Expect = 5e-38, Method: Composition-based stats. Identities = 47/107 (43%), Positives = 68/107 (63%), Gaps = 1/107 (0%) Query: 32 MNKKGIAEFDNCLDSEVRF-SSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETA 90 M + + D + +++ P LYRV+L+ND+YTPMEFV+H+L+ FF + E A Sbjct: 1 MGDDDQSSREGEGDVAFQTADPELKRPSLYRVVLLNDDYTPMEFVVHILEQFFAMNREKA 60 Query: 91 KCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +ML VH QG G CGVY +IAE K V +YSR++Q+PL C +E+ Sbjct: 61 TQVMLAVHTQGKGVCGVYTKDIAETKAALVNDYSRENQHPLLCEVEE 107 >gi|13470855|ref|NP_102424.1| ATP-dependent Clp protease adaptor protein ClpS [Mesorhizobium loti MAFF303099] gi|21542310|sp|Q98MA3|CLPS1_RHILO RecName: Full=ATP-dependent Clp protease adapter protein ClpS 1 gi|14021598|dbj|BAB48210.1| mll0664 [Mesorhizobium loti MAFF303099] Length = 109 Score = 160 bits (406), Expect = 5e-38, Method: Composition-based stats. Identities = 54/82 (65%), Positives = 71/82 (86%) Query: 57 PKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMK 116 P LYRVL++ND+YTPMEFV+HVL+ FF KD E A IML VH+ G+GECGVY +E+AE K Sbjct: 28 PSLYRVLILNDDYTPMEFVVHVLERFFQKDREAATRIMLHVHNHGVGECGVYTFEVAETK 87 Query: 117 VNQVMNYSRQHQYPLQCIMEQK 138 V+QVM+++RQ+Q+PLQC+ME+K Sbjct: 88 VSQVMDFARQNQHPLQCVMEKK 109 >gi|238753481|ref|ZP_04614844.1| ATP-dependent Clp protease adapter protein clpS [Yersinia ruckeri ATCC 29473] gi|238708434|gb|EEQ00789.1| ATP-dependent Clp protease adapter protein clpS [Yersinia ruckeri ATCC 29473] Length = 106 Score = 160 bits (406), Expect = 5e-38, Method: Composition-based stats. Identities = 44/105 (41%), Positives = 66/105 (62%), Gaps = 2/105 (1%) Query: 33 NKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKC 92 N F++ + + ++ P +Y+V+L ND+YTPMEFVI VLQ FF D E A Sbjct: 3 NNNDWLNFEHLVKD--KQIDALKPPSMYKVILNNDDYTPMEFVIDVLQKFFSYDIERATQ 60 Query: 93 IMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +ML VH++G CGV+ E+AE KV V Y+R++++PL C +E+ Sbjct: 61 LMLNVHYKGKAICGVFTAEVAETKVAHVNQYARENEHPLLCTLEK 105 >gi|153871083|ref|ZP_02000343.1| ATP-dependent Clp protease adaptor protein ClpS [Beggiatoa sp. PS] gi|152072449|gb|EDN69655.1| ATP-dependent Clp protease adaptor protein ClpS [Beggiatoa sp. PS] Length = 106 Score = 160 bits (406), Expect = 5e-38, Method: Composition-based stats. Identities = 47/91 (51%), Positives = 69/91 (75%) Query: 47 EVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECG 106 E SK++ P +Y+V+L+ND+YTPM+FV+H+L+ FF + + A IML+VH +G G CG Sbjct: 15 EEEQKSKLKRPPMYKVILLNDDYTPMDFVVHILEIFFGMEKDLATHIMLQVHTKGKGICG 74 Query: 107 VYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 Y+ EIAE KV QV NY+R++Q+PL CI+E+ Sbjct: 75 TYSREIAETKVAQVNNYARENQHPLLCILEK 105 >gi|99082374|ref|YP_614528.1| ATP-dependent Clp protease adaptor protein ClpS [Ruegeria sp. TM1040] gi|122397582|sp|Q1GDK0|CLPS_SILST RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|99038654|gb|ABF65266.1| ATP-dependent Clp protease adaptor protein ClpS [Ruegeria sp. TM1040] Length = 113 Score = 160 bits (405), Expect = 6e-38, Method: Composition-based stats. Identities = 51/117 (43%), Positives = 77/117 (65%), Gaps = 7/117 (5%) Query: 21 LMSFIFMADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQ 80 LM + M+D+ + ++ L + + + P Y+VLL+ND+YTPMEFV+ VL+ Sbjct: 2 LMQPLMMSDN-------PDDESDLGLLTKTRPRTQRPPRYKVLLLNDDYTPMEFVVIVLE 54 Query: 81 NFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 FF +H A IML VH +G+ GV+++E+AE KV QVM+Y+R+HQ+PLQC ME+ Sbjct: 55 RFFGLNHAQAFEIMLTVHKKGLAVVGVFSHEVAETKVAQVMDYARRHQHPLQCTMEK 111 >gi|84685218|ref|ZP_01013117.1| ATP-dependent Clp protease adaptor protein clpS [Maritimibacter alkaliphilus HTCC2654] gi|84666950|gb|EAQ13421.1| ATP-dependent Clp protease adaptor protein clpS [Rhodobacterales bacterium HTCC2654] Length = 118 Score = 160 bits (405), Expect = 6e-38, Method: Composition-based stats. Identities = 55/112 (49%), Positives = 73/112 (65%), Gaps = 5/112 (4%) Query: 27 MADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKD 86 MAD G VR +K + P LY+VLL+ND++TPMEFV+ VL+ FF + Sbjct: 12 MADEPNGPPG-----GDTQLAVRPKAKSKRPPLYKVLLINDDFTPMEFVVMVLERFFSMN 66 Query: 87 HETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 H A IML VH +G+ GV++YEIAE KVNQVM +RQ+Q+PLQC ME++ Sbjct: 67 HAQAFEIMLTVHKKGLAVVGVFSYEIAETKVNQVMEMARQYQHPLQCTMERE 118 >gi|71908707|ref|YP_286294.1| ATP-dependent Clp protease adaptor protein ClpS [Dechloromonas aromatica RCB] gi|123626787|sp|Q47BF7|CLPS_DECAR RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|71848328|gb|AAZ47824.1| ATP-dependent Clp protease adaptor protein ClpS [Dechloromonas aromatica RCB] Length = 102 Score = 160 bits (405), Expect = 7e-38, Method: Composition-based stats. Identities = 50/88 (56%), Positives = 66/88 (75%) Query: 50 FSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYA 109 S++ PK+Y+V+L+ND+YTPM+FVI VLQ FF D E A IMLKVH++G G CGV+ Sbjct: 14 QRSRLGPPKMYKVVLLNDDYTPMDFVITVLQRFFSLDTEQATRIMLKVHNEGRGVCGVFP 73 Query: 110 YEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +IA KV QV ++RQHQ+PL CIME+ Sbjct: 74 RDIAATKVEQVSAFARQHQHPLACIMEE 101 >gi|119775192|ref|YP_927932.1| ATP-dependent Clp protease adaptor protein ClpS [Shewanella amazonensis SB2B] gi|166214742|sp|A1S7A6|CLPS_SHEAM RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|119767692|gb|ABM00263.1| conserved hypothetical protein [Shewanella amazonensis SB2B] Length = 102 Score = 160 bits (405), Expect = 7e-38, Method: Composition-based stats. Identities = 45/101 (44%), Positives = 67/101 (66%) Query: 37 IAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLK 96 +A+ N R +++ P +Y+V+L ND+YTPM+FV+ VLQ FF + A IML+ Sbjct: 1 MAKAGNIERVVERADTELMPPSMYKVILNNDDYTPMDFVVEVLQLFFKMNEHQATEIMLQ 60 Query: 97 VHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +HHQG CGV+ + IAE KV QV ++RQ+Q+PL C +E+ Sbjct: 61 IHHQGKAVCGVFPFGIAETKVAQVNQFARQNQHPLLCSLEK 101 >gi|326388617|ref|ZP_08210210.1| ATP-dependent Clp protease adaptor protein ClpS [Novosphingobium nitrogenifigens DSM 19370] gi|326206868|gb|EGD57692.1| ATP-dependent Clp protease adaptor protein ClpS [Novosphingobium nitrogenifigens DSM 19370] Length = 118 Score = 159 bits (404), Expect = 7e-38, Method: Composition-based stats. Identities = 46/90 (51%), Positives = 71/90 (78%) Query: 48 VRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGV 107 + ++ + P ++RVL++ND+YTPMEFV+ VL+ FF+ D E A +ML VH +G+G CGV Sbjct: 28 IATRARPKKPSMFRVLMLNDDYTPMEFVVMVLKRFFHMDLEQATRVMLHVHQRGVGVCGV 87 Query: 108 YAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 + YEIAE KVNQVM++++Q+Q+PL+C +E+ Sbjct: 88 FPYEIAETKVNQVMDFAKQNQHPLRCTLEK 117 >gi|238897684|ref|YP_002923363.1| regulatory protein for ClpA substrate specificity [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|229465441|gb|ACQ67215.1| regulatory protein for ClpA substrate specificity [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 105 Score = 159 bits (404), Expect = 8e-38, Method: Composition-based stats. Identities = 49/106 (46%), Positives = 71/106 (66%), Gaps = 2/106 (1%) Query: 32 MNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAK 91 MNK G F++ L+ + S V+ P +Y+V+L ND+YTPMEFV+ VLQNFF + E A Sbjct: 1 MNKNGGLNFEHLLNEQ--EISAVKPPDMYKVILNNDDYTPMEFVVDVLQNFFSYNLEQAT 58 Query: 92 CIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +MLKVH+QG CG + E+AE KV V Y+R++++P C +E+ Sbjct: 59 ALMLKVHYQGKAICGTFTAEVAETKVASVNQYARENEHPFLCTLEK 104 >gi|296446322|ref|ZP_06888268.1| ATP-dependent Clp protease adaptor protein ClpS [Methylosinus trichosporium OB3b] gi|296256223|gb|EFH03304.1| ATP-dependent Clp protease adaptor protein ClpS [Methylosinus trichosporium OB3b] Length = 141 Score = 159 bits (404), Expect = 8e-38, Method: Composition-based stats. Identities = 61/127 (48%), Positives = 79/127 (62%) Query: 12 RVKRDGILALMSFIFMADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTP 71 RV R G + A K G + R ++ R P +YRVLL+ND+YT Sbjct: 15 RVTRRGAPPRAAGRTRASKEPRKSGGGDGGAGTALITRTRTQTRRPNMYRVLLLNDDYTT 74 Query: 72 MEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPL 131 EFV+ VL+ +F K E A IML VH+ G+GECGVY YE+AE KV QVM+Y+R+HQ+PL Sbjct: 75 QEFVVIVLRKYFNKSLEEATRIMLHVHNHGVGECGVYTYEVAETKVTQVMDYARKHQHPL 134 Query: 132 QCIMEQK 138 QCIME+K Sbjct: 135 QCIMEKK 141 >gi|53804154|ref|YP_114226.1| ATP-dependent Clp protease adaptor protein ClpS [Methylococcus capsulatus str. Bath] gi|67460232|sp|Q607H2|CLPS_METCA RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|53757915|gb|AAU92206.1| ATP-dependent Clp protease adaptor protein ClpS [Methylococcus capsulatus str. Bath] Length = 106 Score = 159 bits (404), Expect = 8e-38, Method: Composition-based stats. Identities = 45/89 (50%), Positives = 65/89 (73%) Query: 49 RFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVY 108 KV+ P LY+V+L+ND++TPMEFV+HVL FF + E A +ML VH +G+G CGV+ Sbjct: 17 EAQPKVKRPPLYKVMLLNDDFTPMEFVVHVLMLFFGMNEEKATQVMLHVHTRGVGVCGVF 76 Query: 109 AYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 + ++AE KV QV ++RQ+Q+PL C ME+ Sbjct: 77 SKDVAETKVQQVNAHARQNQHPLLCTMEE 105 >gi|114563426|ref|YP_750939.1| ATP-dependent Clp protease adaptor protein ClpS [Shewanella frigidimarina NCIMB 400] gi|122299542|sp|Q081G4|CLPS_SHEFN RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|114334719|gb|ABI72101.1| ATP-dependent Clp protease adaptor protein ClpS [Shewanella frigidimarina NCIMB 400] Length = 102 Score = 159 bits (404), Expect = 8e-38, Method: Composition-based stats. Identities = 46/101 (45%), Positives = 71/101 (70%) Query: 37 IAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLK 96 +A+ N E + S+++ P +Y+V+L ND+YTPM+FV+ VLQ FF K+ + A IML Sbjct: 1 MAKLGNVEHIEEKVESELQPPHMYKVVLNNDDYTPMDFVVEVLQRFFEKNEQQAVDIMLA 60 Query: 97 VHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +H+QG G CGV+ + IAE KV QV ++R++Q+PL C +E+ Sbjct: 61 IHNQGKGLCGVFPFGIAETKVFQVNQFARENQHPLLCTLEK 101 >gi|218673814|ref|ZP_03523483.1| ATP-dependent Clp protease adaptor protein ClpS [Rhizobium etli GR56] Length = 86 Score = 159 bits (404), Expect = 8e-38, Method: Composition-based stats. Identities = 56/86 (65%), Positives = 74/86 (86%) Query: 53 KVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEI 112 K + P LYRVLL+ND+YTPMEFVIH+L+ FF KD E+A IML VH+ G+GECG++ YE+ Sbjct: 1 KTKKPNLYRVLLLNDDYTPMEFVIHILERFFQKDRESATRIMLHVHNHGVGECGIFTYEV 60 Query: 113 AEMKVNQVMNYSRQHQYPLQCIMEQK 138 AE KV+QVM+++RQHQ+PLQC+ME+K Sbjct: 61 AETKVSQVMDFARQHQHPLQCVMEKK 86 >gi|85713420|ref|ZP_01044415.1| ATP-dependent Clp protease adaptor protein ClpS [Idiomarina baltica OS145] gi|85692756|gb|EAQ30759.1| ATP-dependent Clp protease adaptor protein ClpS [Idiomarina baltica OS145] Length = 104 Score = 159 bits (404), Expect = 8e-38, Method: Composition-based stats. Identities = 46/100 (46%), Positives = 67/100 (67%) Query: 39 EFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVH 98 + + D E +++ P +Y+V+L ND+YTPM+FVI VL FF ++E A ML+VH Sbjct: 5 DHQHVYDVEEESKHELKPPSMYKVILNNDDYTPMDFVIEVLIRFFRMNNERATDTMLQVH 64 Query: 99 HQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 ++G CGVY+ EIAE KV QV Y+R++Q+PL C ME + Sbjct: 65 YKGKAVCGVYSAEIAETKVVQVNQYARENQHPLLCTMEHE 104 >gi|197284584|ref|YP_002150456.1| ATP-dependent Clp protease adaptor protein [Proteus mirabilis HI4320] gi|227356766|ref|ZP_03841151.1| ATP-dependent Clp protease adaptor protein [Proteus mirabilis ATCC 29906] gi|194682071|emb|CAR41609.1| ATP-dependent Clp protease adaptor protein [Proteus mirabilis HI4320] gi|227163056|gb|EEI47991.1| ATP-dependent Clp protease adaptor protein [Proteus mirabilis ATCC 29906] Length = 104 Score = 159 bits (404), Expect = 9e-38, Method: Composition-based stats. Identities = 45/102 (44%), Positives = 65/102 (63%) Query: 36 GIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIML 95 G +F + S P +Y+V+L ND+YTPM+FV+ VL +F+ + E A IML Sbjct: 2 GQFDFLTETTLGEKVSQLNEPPAMYKVILNNDDYTPMDFVVEVLTMYFFLNEEKATQIML 61 Query: 96 KVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 VHH+G G CGVY+ +IAE KV QV Y+R++ +PL C +E+ Sbjct: 62 DVHHKGKGVCGVYSADIAETKVAQVNQYARENGHPLLCTLEK 103 >gi|330503290|ref|YP_004380159.1| ATP-dependent Clp protease adaptor protein ClpS [Pseudomonas mendocina NK-01] gi|328917576|gb|AEB58407.1| ATP-dependent Clp protease adaptor protein ClpS [Pseudomonas mendocina NK-01] Length = 120 Score = 159 bits (404), Expect = 9e-38, Method: Composition-based stats. Identities = 43/106 (40%), Positives = 63/106 (59%) Query: 32 MNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAK 91 + E D+ + ++ P +Y+V+L ND+YTPM+FV+ VL+ FF + E A Sbjct: 13 QDHPAEHEDDSSGIAVQESKPALQAPPMYKVVLFNDDYTPMDFVVEVLETFFGMNRELAT 72 Query: 92 CIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 IML VH +G CGVY +IAE K QV Y+R+ Q+PL C +E+ Sbjct: 73 KIMLAVHTEGRAVCGVYTRDIAETKAMQVNQYARESQHPLLCEIEK 118 >gi|255264828|ref|ZP_05344170.1| ATP-dependent Clp protease adaptor protein ClpS [Thalassiobium sp. R2A62] gi|255107163|gb|EET49837.1| ATP-dependent Clp protease adaptor protein ClpS [Thalassiobium sp. R2A62] Length = 113 Score = 159 bits (404), Expect = 9e-38, Method: Composition-based stats. Identities = 49/113 (43%), Positives = 73/113 (64%) Query: 26 FMADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYK 85 D M D+ + V K + P LY+V+++ND+YTPMEFV+ VL+ FF Sbjct: 1 MRVDQIMMADDPGGDDSDVGLAVETRPKTKRPPLYKVMILNDDYTPMEFVVMVLERFFGM 60 Query: 86 DHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 +H + +ML VH +G+ GV++YEIAE KV QVM++++QHQ+PLQC ME++ Sbjct: 61 NHAQSFELMLTVHKKGLAVVGVFSYEIAETKVAQVMDFAQQHQHPLQCTMEKE 113 >gi|308186236|ref|YP_003930367.1| ATP-dependent Clp protease adaptor protein [Pantoea vagans C9-1] gi|308056746|gb|ADO08918.1| ATP-dependent Clp protease adaptor protein [Pantoea vagans C9-1] Length = 126 Score = 159 bits (403), Expect = 1e-37, Method: Composition-based stats. Identities = 47/109 (43%), Positives = 70/109 (64%), Gaps = 2/109 (1%) Query: 29 DSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHE 88 ++ N F++ + +VR ++ P +Y+V+L ND+YTPMEFVI V+Q FF D E Sbjct: 19 NTMANTNDWLNFEHLAEDKVREG--LKPPSMYKVILNNDDYTPMEFVIDVVQKFFSYDVE 76 Query: 89 TAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 A +MLKVH+ G CGV+ E+AE K QV NY+R++ +PL C +E+ Sbjct: 77 RATQLMLKVHYHGKAICGVFTAEVAETKAAQVNNYARENHHPLLCTLEK 125 >gi|163737216|ref|ZP_02144634.1| ATP-dependent Clp protease adaptor protein ClpS [Phaeobacter gallaeciensis BS107] gi|163740373|ref|ZP_02147767.1| ATP-dependent Clp protease, adaptor protein ClpS [Phaeobacter gallaeciensis 2.10] gi|161386231|gb|EDQ10606.1| ATP-dependent Clp protease, adaptor protein ClpS [Phaeobacter gallaeciensis 2.10] gi|161389820|gb|EDQ14171.1| ATP-dependent Clp protease adaptor protein ClpS [Phaeobacter gallaeciensis BS107] Length = 113 Score = 159 bits (403), Expect = 1e-37, Method: Composition-based stats. Identities = 48/112 (42%), Positives = 72/112 (64%) Query: 27 MADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKD 86 M + + ++ D L + K + P Y+VLL+ND+YTPMEFV+ VL+ FF Sbjct: 1 MLPTPVMMSDHSDDDTDLGVLTKTRPKTQRPPRYKVLLLNDDYTPMEFVVMVLERFFNMT 60 Query: 87 HETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 H A +ML VH +G+ GV+++EIAE KV QVM+++ +HQ+PLQC ME++ Sbjct: 61 HAEAFEVMLTVHKKGVAVVGVFSHEIAETKVGQVMDFAHRHQHPLQCTMEKE 112 >gi|307946408|ref|ZP_07661743.1| ATP-dependent Clp protease adaptor protein ClpS [Roseibium sp. TrichSKD4] gi|307770072|gb|EFO29298.1| ATP-dependent Clp protease adaptor protein ClpS [Roseibium sp. TrichSKD4] Length = 110 Score = 159 bits (403), Expect = 1e-37, Method: Composition-based stats. Identities = 57/91 (62%), Positives = 75/91 (82%) Query: 48 VRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGV 107 R K + P LYRVLL+ND+YTPMEFVIHV+++FF K+ E A IML VHH G+GECG+ Sbjct: 20 TRTKPKTKRPNLYRVLLLNDDYTPMEFVIHVVESFFQKNREEATHIMLHVHHHGVGECGI 79 Query: 108 YAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 Y+YE+AE KV QVM+++R+HQ+PLQC+ME+K Sbjct: 80 YSYEVAETKVTQVMDFARKHQHPLQCVMEKK 110 >gi|158522493|ref|YP_001530363.1| ATP-dependent Clp protease adaptor protein ClpS [Desulfococcus oleovorans Hxd3] gi|158511319|gb|ABW68286.1| ATP-dependent Clp protease adaptor protein ClpS [Desulfococcus oleovorans Hxd3] Length = 104 Score = 159 bits (403), Expect = 1e-37, Method: Composition-based stats. Identities = 44/90 (48%), Positives = 64/90 (71%) Query: 49 RFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVY 108 + ++V+ P LY+VLL ND+YT MEFV+ +L++ F K E A IML VH G+G CG++ Sbjct: 15 KTGTRVKPPSLYKVLLHNDDYTTMEFVVEILRHIFRKSLEDATTIMLNVHRNGVGCCGLF 74 Query: 109 AYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 YEIAE K++ V Y+R+ +PLQC ME++ Sbjct: 75 TYEIAETKIDLVHGYARERGFPLQCSMERE 104 >gi|153864221|ref|ZP_01997190.1| ATP-dependent Clp protease adaptor protein ClpS [Beggiatoa sp. SS] gi|152146285|gb|EDN72811.1| ATP-dependent Clp protease adaptor protein ClpS [Beggiatoa sp. SS] Length = 106 Score = 159 bits (403), Expect = 1e-37, Method: Composition-based stats. Identities = 47/106 (44%), Positives = 72/106 (67%), Gaps = 1/106 (0%) Query: 32 MNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAK 91 M + +D+ + E K++ P LY+V+L+ND+YTPM+FV+HVL+NFF + + A Sbjct: 1 MAQLADPMYDDDVVVE-ETKPKLKRPPLYKVVLLNDDYTPMDFVVHVLENFFGMNQDLAN 59 Query: 92 CIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +ML+VH +G G CG Y ++AE KV QV Y+R++Q+PL C ME+ Sbjct: 60 HVMLQVHLEGKGICGTYTRDVAETKVTQVNTYARENQHPLLCTMEK 105 >gi|262370290|ref|ZP_06063616.1| substrate modulator for ClpAP [Acinetobacter johnsonii SH046] gi|262314632|gb|EEY95673.1| substrate modulator for ClpAP [Acinetobacter johnsonii SH046] Length = 138 Score = 159 bits (403), Expect = 1e-37, Method: Composition-based stats. Identities = 45/108 (41%), Positives = 67/108 (62%) Query: 31 RMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETA 90 R++ E +N + +++ P LY V+L+ND+YTPM+FVI +LQ +F + + A Sbjct: 30 RLSNDEPNEEENGDVAVQTAPPELKRPPLYAVVLMNDDYTPMDFVIEILQQYFALNLDQA 89 Query: 91 KCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 +ML VH++G G GVY +IAE K NQV NY+R +PL C +E K Sbjct: 90 TQVMLTVHYEGKGVAGVYPRDIAETKANQVNNYARSQGHPLLCQIEPK 137 >gi|238784507|ref|ZP_04628515.1| ATP-dependent Clp protease adapter protein clpS [Yersinia bercovieri ATCC 43970] gi|238795830|ref|ZP_04639343.1| ATP-dependent Clp protease adapter protein clpS [Yersinia mollaretii ATCC 43969] gi|238714570|gb|EEQ06574.1| ATP-dependent Clp protease adapter protein clpS [Yersinia bercovieri ATCC 43970] gi|238720293|gb|EEQ12096.1| ATP-dependent Clp protease adapter protein clpS [Yersinia mollaretii ATCC 43969] Length = 106 Score = 159 bits (403), Expect = 1e-37, Method: Composition-based stats. Identities = 44/105 (41%), Positives = 65/105 (61%), Gaps = 2/105 (1%) Query: 33 NKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKC 92 F++ + + ++ P +Y+V+L ND+YTPMEFVI VLQ FF D E A Sbjct: 3 KNNDWLNFEHLVKD--KQKEALKPPSMYKVILNNDDYTPMEFVIDVLQKFFSYDIERATQ 60 Query: 93 IMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +ML VH+QG CGV+ E+AE KV V Y+R++++PL C +E+ Sbjct: 61 LMLNVHYQGKAICGVFTAEVAETKVAHVNQYARENEHPLLCTLEK 105 >gi|271500837|ref|YP_003333862.1| ATP-dependent Clp protease adaptor protein ClpS [Dickeya dadantii Ech586] gi|270344392|gb|ACZ77157.1| ATP-dependent Clp protease adaptor protein ClpS [Dickeya dadantii Ech586] Length = 106 Score = 159 bits (402), Expect = 1e-37, Method: Composition-based stats. Identities = 45/98 (45%), Positives = 66/98 (67%) Query: 40 FDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHH 99 ++ ++ ++ P +Y+V+L ND+YTPMEFVI VLQ FF D E A +ML VH+ Sbjct: 8 PQTDDLTKEHYTEALQPPSMYKVILNNDDYTPMEFVIDVLQKFFSYDIERATQLMLTVHY 67 Query: 100 QGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 QG CGVY+ E+AE KV QV Y+R++++PL C +E+ Sbjct: 68 QGKAICGVYSAEVAETKVAQVNRYARENEHPLLCTLEK 105 >gi|228311827|pdb|2W9R|A Chain A, Structural Basis Of N-End Rule Substrate Recognition In Escherichia Coli By The Clpap Adaptor Protein Clps gi|228311836|pdb|2WA9|A Chain A, Structural Basis Of N-End Rule Substrate Recognition In Escherichia Coli By The Clpap Adaptor Protein Clps - Trp Peptide Structure gi|228311837|pdb|2WA9|B Chain B, Structural Basis Of N-End Rule Substrate Recognition In Escherichia Coli By The Clpap Adaptor Protein Clps - Trp Peptide Structure gi|228311838|pdb|2WA9|C Chain C, Structural Basis Of N-End Rule Substrate Recognition In Escherichia Coli By The Clpap Adaptor Protein Clps - Trp Peptide Structure gi|228311839|pdb|2WA9|D Chain D, Structural Basis Of N-End Rule Substrate Recognition In Escherichia Coli By The Clpap Adaptor Protein Clps - Trp Peptide Structure gi|228311840|pdb|2WA9|E Chain E, Structural Basis Of N-End Rule Substrate Recognition In Escherichia Coli By The Clpap Adaptor Protein Clps - Trp Peptide Structure gi|228311841|pdb|2WA9|F Chain F, Structural Basis Of N-End Rule Substrate Recognition In Escherichia Coli By The Clpap Adaptor Protein Clps - Trp Peptide Structure gi|228311842|pdb|2WA9|G Chain G, Structural Basis Of N-End Rule Substrate Recognition In Escherichia Coli By The Clpap Adaptor Protein Clps - Trp Peptide Structure Length = 108 Score = 159 bits (402), Expect = 1e-37, Method: Composition-based stats. Identities = 48/105 (45%), Positives = 69/105 (65%), Gaps = 2/105 (1%) Query: 33 NKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKC 92 +FD + +VR + ++ P +Y+V+LVND+YTPMEFVI VLQ FF D E A Sbjct: 3 KTNDWLDFDQLAEEKVRDA--LKPPSMYKVILVNDDYTPMEFVIDVLQKFFSYDVERATQ 60 Query: 93 IMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +ML VH+QG CGV+ E+AE KV V Y+R++++PL C +E+ Sbjct: 61 LMLAVHYQGKAICGVFTAEVAETKVAMVNKYARENEHPLLCTLEK 105 >gi|21231414|ref|NP_637331.1| ATP-dependent Clp protease adaptor protein ClpS [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66768532|ref|YP_243294.1| ATP-dependent Clp protease adaptor protein ClpS [Xanthomonas campestris pv. campestris str. 8004] gi|24638420|sp|Q8P999|CLPS_XANCP RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|81305496|sp|Q4UUJ9|CLPS_XANC8 RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|21113082|gb|AAM41255.1| conserved hypothetical protein [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66573864|gb|AAY49274.1| conserved hypothetical protein [Xanthomonas campestris pv. campestris str. 8004] Length = 106 Score = 159 bits (402), Expect = 1e-37, Method: Composition-based stats. Identities = 53/106 (50%), Positives = 69/106 (65%), Gaps = 1/106 (0%) Query: 32 MNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAK 91 M +K E D+ L E +V P Y+VLL+ND+YTPM+FV+ VLQ FF + E A Sbjct: 1 MPRKTSHEHDHGLVVET-SKPEVAPPPRYQVLLLNDDYTPMDFVVTVLQQFFNLELERAT 59 Query: 92 CIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +ML VH +G G CGVY+ E+AE KV QV +SR +Q+PL C MEQ Sbjct: 60 QVMLHVHTRGRGVCGVYSREVAESKVAQVNEFSRMNQHPLLCTMEQ 105 >gi|90415922|ref|ZP_01223855.1| hypothetical protein GB2207_01777 [marine gamma proteobacterium HTCC2207] gi|90332296|gb|EAS47493.1| hypothetical protein GB2207_01777 [marine gamma proteobacterium HTCC2207] Length = 114 Score = 159 bits (402), Expect = 1e-37, Method: Composition-based stats. Identities = 43/111 (38%), Positives = 68/111 (61%), Gaps = 3/111 (2%) Query: 27 MADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKD 86 M++ + + + +++E K++ P +++V+L+ND+YTPMEFV+ +L+ FF K Sbjct: 1 MSNDKNPPAWQHDGNTVVETE---RPKLKKPSMFKVVLLNDDYTPMEFVVELLEKFFSKT 57 Query: 87 HETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 E A IML +H G G CG+Y ++AE K V YSR HQ+PL C +E Sbjct: 58 RENATRIMLSIHTDGKGVCGIYTKDVAETKAGTVNQYSRDHQHPLLCEVEP 108 >gi|161503926|ref|YP_001571038.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|189082476|sp|A9MI06|CLPS_SALAR RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|160865273|gb|ABX21896.1| hypothetical protein SARI_02017 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 106 Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats. Identities = 47/105 (44%), Positives = 70/105 (66%), Gaps = 2/105 (1%) Query: 33 NKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKC 92 +FD ++ ++R + ++ P +Y+V+LVND+YTPMEFVI VLQ FF D E A Sbjct: 3 KTNDWLDFDQLVEDDLRDA--LKPPSMYKVILVNDDYTPMEFVIDVLQKFFSYDVERATQ 60 Query: 93 IMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +ML VH+QG CGV+ E+AE KV V Y+R++++PL C +E+ Sbjct: 61 LMLAVHYQGKAICGVFTAEVAETKVEMVNQYARENEHPLLCTLEK 105 >gi|157146439|ref|YP_001453758.1| ATP-dependent Clp protease adaptor protein ClpS [Citrobacter koseri ATCC BAA-895] gi|166214733|sp|A8AIK9|CLPS_CITK8 RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|157083644|gb|ABV13322.1| hypothetical protein CKO_02199 [Citrobacter koseri ATCC BAA-895] Length = 106 Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats. Identities = 48/105 (45%), Positives = 69/105 (65%), Gaps = 2/105 (1%) Query: 33 NKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKC 92 +FD + +VR + ++ P +Y+V+LVND+YTPMEFVI VLQ FF D E A Sbjct: 3 KTNDWLDFDQLAEDKVRDA--LKPPSMYKVILVNDDYTPMEFVIDVLQKFFSYDVERATQ 60 Query: 93 IMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +ML VH+QG CGV+ E+AE KV V Y+R++++PL C +E+ Sbjct: 61 LMLAVHYQGKAICGVFTAEVAETKVAMVNKYARENEHPLLCTLEK 105 >gi|16759817|ref|NP_455434.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|16764306|ref|NP_459921.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|29142410|ref|NP_805752.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56414003|ref|YP_151078.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|62179469|ref|YP_215886.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161614825|ref|YP_001588790.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|167550381|ref|ZP_02344138.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|167992164|ref|ZP_02573262.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168230818|ref|ZP_02655876.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|168236855|ref|ZP_02661913.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|168240792|ref|ZP_02665724.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|168263570|ref|ZP_02685543.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|168466528|ref|ZP_02700390.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|168819925|ref|ZP_02831925.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|194444791|ref|YP_002040145.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194450386|ref|YP_002044938.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194470024|ref|ZP_03076008.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194734739|ref|YP_002114001.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197247594|ref|YP_002145862.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197264687|ref|ZP_03164761.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197362926|ref|YP_002142563.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|198243258|ref|YP_002214872.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|204929828|ref|ZP_03220849.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|207856339|ref|YP_002242990.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|213021515|ref|ZP_03335962.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] gi|213052429|ref|ZP_03345307.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213419934|ref|ZP_03353000.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] gi|213428022|ref|ZP_03360772.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213581370|ref|ZP_03363196.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] gi|213620715|ref|ZP_03373498.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] gi|213649852|ref|ZP_03379905.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|213865354|ref|ZP_03387473.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Typhi str. M223] gi|224582756|ref|YP_002636554.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|238913424|ref|ZP_04657261.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|289825000|ref|ZP_06544363.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|54036861|sp|P67650|CLPS_SALTI RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|54041058|sp|P67649|CLPS_SALTY RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|67460139|sp|Q57R56|CLPS_SALCH RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|67460197|sp|Q5PGK0|CLPS_SALPA RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|189082477|sp|A9N7Z5|CLPS_SALPB RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|238689929|sp|B5BBT0|CLPS_SALPK RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|238690018|sp|B5F127|CLPS_SALA4 RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|238690349|sp|B5FQ21|CLPS_SALDC RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|238690424|sp|B5QYM8|CLPS_SALEP RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|238690613|sp|B4TD06|CLPS_SALHS RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|238693573|sp|B4T0G6|CLPS_SALNS RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|238693662|sp|B4TRR1|CLPS_SALSV RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|254763823|sp|C0PXR3|CLPS_SALPC RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|25321103|pir||AH0609 conserved hypothetical protein STY0942 [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16419456|gb|AAL19880.1| putative cytoplasmic protein [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|16502110|emb|CAD05346.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Typhi] gi|29138040|gb|AAO69601.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56128260|gb|AAV77766.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|62127102|gb|AAX64805.1| putative cytoplasmic protein [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161364189|gb|ABX67957.1| hypothetical protein SPAB_02578 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194403454|gb|ACF63676.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194408690|gb|ACF68909.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194456388|gb|EDX45227.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194710241|gb|ACF89462.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|195630880|gb|EDX49466.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197094403|emb|CAR59919.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|197211297|gb|ACH48694.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197242942|gb|EDY25562.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197290191|gb|EDY29548.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|197937774|gb|ACH75107.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|204320822|gb|EDZ06023.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205324512|gb|EDZ12351.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205329607|gb|EDZ16371.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205334903|gb|EDZ21667.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|205340436|gb|EDZ27200.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205343076|gb|EDZ29840.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205347686|gb|EDZ34317.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|206708142|emb|CAR32435.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|224467283|gb|ACN45113.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|261246161|emb|CBG23965.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267992673|gb|ACY87558.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301157489|emb|CBW16979.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312911934|dbj|BAJ35908.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|320085181|emb|CBY94968.1| ATP-dependent Clp protease adapter protein clpS [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|321223269|gb|EFX48338.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|322616381|gb|EFY13290.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322619631|gb|EFY16506.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322622673|gb|EFY19518.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322628586|gb|EFY25373.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322631522|gb|EFY28278.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322637049|gb|EFY33752.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322641753|gb|EFY38389.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322644455|gb|EFY40995.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322649575|gb|EFY46006.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322654123|gb|EFY50446.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322658038|gb|EFY54305.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322663512|gb|EFY59714.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322670248|gb|EFY66388.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322671484|gb|EFY67606.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322676840|gb|EFY72907.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322682765|gb|EFY78784.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322686444|gb|EFY82426.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|322713939|gb|EFZ05510.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] gi|323129211|gb|ADX16641.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|323196102|gb|EFZ81265.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323196752|gb|EFZ81896.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323202968|gb|EFZ88002.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323209009|gb|EFZ93946.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323211914|gb|EFZ96742.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323215154|gb|EFZ99899.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323222357|gb|EGA06735.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323226878|gb|EGA11061.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323229832|gb|EGA13955.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323233057|gb|EGA17153.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323240792|gb|EGA24834.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323243109|gb|EGA27129.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323247430|gb|EGA31386.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323251652|gb|EGA35519.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323257360|gb|EGA41058.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323261949|gb|EGA45515.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323267964|gb|EGA51443.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323271969|gb|EGA55384.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] gi|326622625|gb|EGE28970.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Dublin str. 3246] Length = 106 Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats. Identities = 48/105 (45%), Positives = 69/105 (65%), Gaps = 2/105 (1%) Query: 33 NKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKC 92 +FD ++ VR + ++ P +Y+V+LVND+YTPMEFVI VLQ FF D E A Sbjct: 3 KTNDWLDFDQLVEDSVRDA--LKPPSMYKVILVNDDYTPMEFVIDVLQKFFSYDVERATQ 60 Query: 93 IMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +ML VH+QG CGV+ E+AE KV V Y+R++++PL C +E+ Sbjct: 61 LMLAVHYQGKAICGVFTAEVAETKVAMVNKYARENEHPLLCTLEK 105 >gi|283832492|ref|ZP_06352233.1| ATP-dependent Clp protease adaptor protein ClpS [Citrobacter youngae ATCC 29220] gi|291072152|gb|EFE10261.1| ATP-dependent Clp protease adaptor protein ClpS [Citrobacter youngae ATCC 29220] Length = 106 Score = 158 bits (401), Expect = 2e-37, Method: Composition-based stats. Identities = 47/107 (43%), Positives = 68/107 (63%), Gaps = 2/107 (1%) Query: 31 RMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETA 90 +FD L +E + ++ P +Y+V+L+ND+YTPMEFVI VLQ FF D E A Sbjct: 1 MSKTNDWLDFD--LLAEDKLRDALKPPSMYKVILINDDYTPMEFVIDVLQKFFSYDVERA 58 Query: 91 KCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +ML VH+QG CGV+ E+AE KV V Y+R++++PL C +E+ Sbjct: 59 TQLMLAVHYQGKAICGVFTAEVAETKVAMVNKYARENEHPLLCTLEK 105 >gi|237746972|ref|ZP_04577452.1| ATP-dependent Clp protease adaptor protein ClpS [Oxalobacter formigenes HOxBLS] gi|229378323|gb|EEO28414.1| ATP-dependent Clp protease adaptor protein ClpS [Oxalobacter formigenes HOxBLS] Length = 143 Score = 158 bits (401), Expect = 2e-37, Method: Composition-based stats. Identities = 45/90 (50%), Positives = 66/90 (73%) Query: 48 VRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGV 107 ++ ++ P +YRVLL+ND++TPM+FVI VLQ +F+K+ E A IMLKVH +G G CG+ Sbjct: 53 EETATVLKPPPMYRVLLLNDDFTPMDFVIFVLQEYFHKNAEMATRIMLKVHREGKGVCGI 112 Query: 108 YAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 + +IA KV QV+ ++RQ +PLQC ME+ Sbjct: 113 FPKDIANTKVEQVIRHARQEGHPLQCTMEE 142 >gi|259417778|ref|ZP_05741697.1| ATP-dependent Clp protease adaptor protein ClpS [Silicibacter sp. TrichCH4B] gi|259346684|gb|EEW58498.1| ATP-dependent Clp protease adaptor protein ClpS [Silicibacter sp. TrichCH4B] Length = 107 Score = 158 bits (401), Expect = 2e-37, Method: Composition-based stats. Identities = 47/100 (47%), Positives = 70/100 (70%) Query: 38 AEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKV 97 + ++ L + + + P Y+VLL+ND+YTPMEFV+ VL+ FF +H A IML V Sbjct: 6 PDDESDLGVLTKTRPRTQRPPRYKVLLLNDDYTPMEFVVIVLERFFGLNHAQAFEIMLTV 65 Query: 98 HHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 H +G+ GV+++E+AE KV QVM+Y+R+HQ+PLQC ME+ Sbjct: 66 HKKGLAVVGVFSHEVAETKVAQVMDYARRHQHPLQCTMEK 105 >gi|242239694|ref|YP_002987875.1| ATP-dependent Clp protease adaptor protein ClpS [Dickeya dadantii Ech703] gi|242131751|gb|ACS86053.1| ATP-dependent Clp protease adaptor protein ClpS [Dickeya dadantii Ech703] Length = 106 Score = 158 bits (401), Expect = 2e-37, Method: Composition-based stats. Identities = 45/98 (45%), Positives = 64/98 (65%) Query: 40 FDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHH 99 ++ ++ P +Y+V+L ND+YTPMEFVI VLQ FF D E A +ML VH+ Sbjct: 8 PQVEGQTKDLHEEALQPPSMYKVILNNDDYTPMEFVIDVLQKFFSYDIERATQLMLTVHY 67 Query: 100 QGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 QG CGVY+ E+AE KV QV Y+R++++PL C +E+ Sbjct: 68 QGKAICGVYSAEVAETKVAQVNRYARENEHPLLCTLEK 105 >gi|157369916|ref|YP_001477905.1| ATP-dependent Clp protease adaptor protein ClpS [Serratia proteamaculans 568] gi|270261165|ref|ZP_06189438.1| ATP-dependent Clp protease adapter protein ClpS [Serratia odorifera 4Rx13] gi|293396848|ref|ZP_06641122.1| ATP-dependent Clp protease adaptor protein ClpS [Serratia odorifera DSM 4582] gi|167008656|sp|A8GCD7|CLPS_SERP5 RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|157321680|gb|ABV40777.1| ATP-dependent Clp protease adaptor protein ClpS [Serratia proteamaculans 568] gi|270044649|gb|EFA17740.1| ATP-dependent Clp protease adapter protein ClpS [Serratia odorifera 4Rx13] gi|291420319|gb|EFE93574.1| ATP-dependent Clp protease adaptor protein ClpS [Serratia odorifera DSM 4582] Length = 106 Score = 158 bits (401), Expect = 2e-37, Method: Composition-based stats. Identities = 47/105 (44%), Positives = 67/105 (63%), Gaps = 2/105 (1%) Query: 33 NKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKC 92 N F++ +E + V+ P +Y+V+L ND+YTPMEFVI VLQ FF D E A Sbjct: 3 NNNDWLNFEHL--AEEKQIDAVKPPSMYKVILNNDDYTPMEFVIDVLQKFFSYDIERATQ 60 Query: 93 IMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +ML VH+QG CGV+ E+AE KV V Y+R++++PL C +E+ Sbjct: 61 LMLTVHYQGKAICGVFTAEVAETKVVHVNRYARENEHPLLCTLEK 105 >gi|90021331|ref|YP_527158.1| ATP-dependent Clp protease adaptor protein ClpS [Saccharophagus degradans 2-40] gi|89950931|gb|ABD80946.1| ATP-dependent Clp protease adaptor protein ClpS [Saccharophagus degradans 2-40] Length = 124 Score = 158 bits (401), Expect = 2e-37, Method: Composition-based stats. Identities = 41/102 (40%), Positives = 68/102 (66%), Gaps = 3/102 (2%) Query: 38 AEFDNCLDSEVRF---SSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIM 94 ++ D D V +++ P +Y+V+++ND+YTPMEFV+ VL+ FF + E+A IM Sbjct: 15 SDEDTTFDGGVAVQAEKPRLKRPPMYKVVMLNDDYTPMEFVVEVLELFFSMNRESATRIM 74 Query: 95 LKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIME 136 L+VH +G CGV++ ++AE K QV Y++Q+++PL C +E Sbjct: 75 LRVHTEGKAVCGVFSRDVAETKAAQVNQYAKQNEHPLLCEIE 116 >gi|262372530|ref|ZP_06065809.1| substrate modulator for ClpAP [Acinetobacter junii SH205] gi|262312555|gb|EEY93640.1| substrate modulator for ClpAP [Acinetobacter junii SH205] Length = 136 Score = 158 bits (401), Expect = 2e-37, Method: Composition-based stats. Identities = 46/123 (37%), Positives = 74/123 (60%), Gaps = 2/123 (1%) Query: 18 ILALMSFIFMADSRMNKK-GIAEFDNCLDSEVRFSS-KVRVPKLYRVLLVNDNYTPMEFV 75 + + + D + + + D+ + V+ + +++ P LY V+L+ND+YTPM+FV Sbjct: 13 VKSSFQQSGLIDWHLGPRLSDSHEDHEGEVVVQTAPPELKRPPLYAVVLLNDDYTPMDFV 72 Query: 76 IHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIM 135 I +LQ++F D + A +ML VH++G G GVY +IAE K NQV NY+R +PL C + Sbjct: 73 IEILQSYFGMDFDQASQVMLTVHYEGKGTAGVYPRDIAETKANQVNNYARSQGHPLLCQI 132 Query: 136 EQK 138 E K Sbjct: 133 EPK 135 >gi|311280209|ref|YP_003942440.1| ATP-dependent Clp protease adaptor protein ClpS [Enterobacter cloacae SCF1] gi|308749404|gb|ADO49156.1| ATP-dependent Clp protease adaptor protein ClpS [Enterobacter cloacae SCF1] Length = 106 Score = 158 bits (401), Expect = 2e-37, Method: Composition-based stats. Identities = 49/107 (45%), Positives = 69/107 (64%), Gaps = 2/107 (1%) Query: 31 RMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETA 90 + +FD +VR + ++ P +Y+V+LVND+YTPMEFVI VLQ FF D E A Sbjct: 1 MSKTRDWLDFDQLTKDQVRDA--LKPPAMYKVILVNDDYTPMEFVIDVLQKFFSYDVERA 58 Query: 91 KCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +ML VH+QG CGV+ E+AE KV V Y+R++++PL C +EQ Sbjct: 59 TQLMLTVHYQGKAICGVFTAEVAETKVAMVNQYARENEHPLLCTLEQ 105 >gi|307130779|ref|YP_003882795.1| regulatory protein for ClpA substrate specificity [Dickeya dadantii 3937] gi|306528308|gb|ADM98238.1| regulatory protein for ClpA substrate specificity [Dickeya dadantii 3937] Length = 106 Score = 158 bits (401), Expect = 2e-37, Method: Composition-based stats. Identities = 44/92 (47%), Positives = 64/92 (69%) Query: 46 SEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGEC 105 ++ + ++ P +Y+V+L ND+YTPMEFVI VLQ FF D E A +ML VH+ G C Sbjct: 14 TKEHNAEALQPPSMYKVILNNDDYTPMEFVIDVLQKFFSYDIERATQLMLTVHYHGKAIC 73 Query: 106 GVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 GVY+ E+AE KV QV Y+R++++PL C +E+ Sbjct: 74 GVYSAEVAETKVAQVNRYARENEHPLLCTLEK 105 >gi|126740638|ref|ZP_01756325.1| ATP-dependent Clp protease, adaptor protein ClpS [Roseobacter sp. SK209-2-6] gi|126718439|gb|EBA15154.1| ATP-dependent Clp protease, adaptor protein ClpS [Roseobacter sp. SK209-2-6] Length = 121 Score = 158 bits (401), Expect = 2e-37, Method: Composition-based stats. Identities = 48/113 (42%), Positives = 68/113 (60%) Query: 26 FMADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYK 85 M + + D + K + P Y+VLL+ND+YTPMEFV+ VL+ FF Sbjct: 8 PMPLQPVMMSQYPDDDADTGVLTKTRPKTKRPPRYKVLLLNDDYTPMEFVVMVLERFFSM 67 Query: 86 DHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 H A IML VH +G+ GV+ +EIAE KV QVM+++ +HQ+PLQC ME++ Sbjct: 68 THAEAFDIMLTVHKKGLAVVGVFTHEIAETKVAQVMDFAGRHQHPLQCTMEKE 120 >gi|281178016|dbj|BAI54346.1| conserved hypothetical protein [Escherichia coli SE15] Length = 106 Score = 158 bits (400), Expect = 2e-37, Method: Composition-based stats. Identities = 47/105 (44%), Positives = 69/105 (65%), Gaps = 2/105 (1%) Query: 33 NKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKC 92 +FD + +VR + ++ P +Y+V+LVND+YTPM+FVI VLQ FF D E A Sbjct: 3 KTNDWLDFDQLAEEKVRDA--LKPPSMYKVILVNDDYTPMDFVIDVLQKFFSYDVERATQ 60 Query: 93 IMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +ML VH+QG CGV+ E+AE KV V Y+R++++PL C +E+ Sbjct: 61 LMLAVHYQGKAICGVFTAEVAETKVAMVNKYARENEHPLLCTLEK 105 >gi|123441829|ref|YP_001005813.1| ATP-dependent Clp protease adaptor protein ClpS [Yersinia enterocolitica subsp. enterocolitica 8081] gi|238762120|ref|ZP_04623093.1| ATP-dependent Clp protease adapter protein clpS [Yersinia kristensenii ATCC 33638] gi|238789631|ref|ZP_04633414.1| ATP-dependent Clp protease adapter protein clpS [Yersinia frederiksenii ATCC 33641] gi|158512680|sp|A1JMC5|CLPS_YERE8 RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|122088790|emb|CAL11596.1| conserved hypothetical protein [Yersinia enterocolitica subsp. enterocolitica 8081] gi|238699848|gb|EEP92592.1| ATP-dependent Clp protease adapter protein clpS [Yersinia kristensenii ATCC 33638] gi|238722184|gb|EEQ13841.1| ATP-dependent Clp protease adapter protein clpS [Yersinia frederiksenii ATCC 33641] Length = 106 Score = 158 bits (400), Expect = 2e-37, Method: Composition-based stats. Identities = 44/105 (41%), Positives = 65/105 (61%), Gaps = 2/105 (1%) Query: 33 NKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKC 92 F++ + + ++ P +Y+V+L ND+YTPMEFVI VLQ FF D E A Sbjct: 3 KNNDWLNFEHLVKD--KQIEALKPPSMYKVILNNDDYTPMEFVIDVLQKFFSYDIERATQ 60 Query: 93 IMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +ML VH+QG CGV+ E+AE KV V Y+R++++PL C +E+ Sbjct: 61 LMLNVHYQGKAICGVFTAEVAETKVAHVNQYARENEHPLLCTLEK 105 >gi|228311830|pdb|2WA8|A Chain A, Structural Basis Of N-End Rule Substrate Recognition In Escherichia Coli By The Clpap Adaptor Protein Clps - The Phe Peptide Structure gi|228311832|pdb|2WA8|C Chain C, Structural Basis Of N-End Rule Substrate Recognition In Escherichia Coli By The Clpap Adaptor Protein Clps - The Phe Peptide Structure Length = 107 Score = 158 bits (400), Expect = 2e-37, Method: Composition-based stats. Identities = 48/105 (45%), Positives = 69/105 (65%), Gaps = 2/105 (1%) Query: 33 NKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKC 92 +FD + +VR + ++ P +Y+V+LVND+YTPMEFVI VLQ FF D E A Sbjct: 3 KTNDWLDFDQLAEEKVRDA--LKPPSMYKVILVNDDYTPMEFVIDVLQKFFSYDVERATQ 60 Query: 93 IMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +ML VH+QG CGV+ E+AE KV V Y+R++++PL C +E+ Sbjct: 61 LMLAVHYQGKAICGVFTAEVAETKVAMVNKYARENEHPLLCTLEK 105 >gi|15800639|ref|NP_286653.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli O157:H7 EDL933] gi|15830221|ref|NP_308994.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli O157:H7 str. Sakai] gi|16128849|ref|NP_415402.1| regulatory protein for ClpA substrate specificity [Escherichia coli str. K-12 substr. MG1655] gi|24112257|ref|NP_706767.1| ATP-dependent Clp protease adaptor protein ClpS [Shigella flexneri 2a str. 301] gi|26246907|ref|NP_752947.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli CFT073] gi|30062369|ref|NP_836540.1| ATP-dependent Clp protease adaptor protein ClpS [Shigella flexneri 2a str. 2457T] gi|74311440|ref|YP_309859.1| ATP-dependent Clp protease adaptor protein ClpS [Shigella sonnei Ss046] gi|82543368|ref|YP_407315.1| ATP-dependent Clp protease adaptor protein ClpS [Shigella boydii Sb227] gi|82777596|ref|YP_403945.1| ATP-dependent Clp protease adaptor protein ClpS [Shigella dysenteriae Sd197] gi|89107732|ref|AP_001512.1| regulatory protein for ClpA substrate specificity [Escherichia coli str. K-12 substr. W3110] gi|91209918|ref|YP_539904.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli UTI89] gi|110641082|ref|YP_668812.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli 536] gi|110804883|ref|YP_688403.1| ATP-dependent Clp protease adaptor protein ClpS [Shigella flexneri 5 str. 8401] gi|117623059|ref|YP_851972.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli APEC O1] gi|157156472|ref|YP_001462078.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli E24377A] gi|157160404|ref|YP_001457722.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli HS] gi|168752462|ref|ZP_02777484.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli O157:H7 str. EC4113] gi|168759050|ref|ZP_02784057.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli O157:H7 str. EC4401] gi|168769874|ref|ZP_02794881.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli O157:H7 str. EC4486] gi|168777871|ref|ZP_02802878.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli O157:H7 str. EC4196] gi|168783792|ref|ZP_02808799.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli O157:H7 str. EC4076] gi|168789133|ref|ZP_02814140.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli O157:H7 str. EC869] gi|168802712|ref|ZP_02827719.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli O157:H7 str. EC508] gi|170020716|ref|YP_001725670.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli ATCC 8739] gi|170080540|ref|YP_001729860.1| regulatory protein for ClpA substrate specificity [Escherichia coli str. K-12 substr. DH10B] gi|170683903|ref|YP_001744326.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli SMS-3-5] gi|187732054|ref|YP_001880921.1| ATP-dependent Clp protease adaptor protein ClpS [Shigella boydii CDC 3083-94] gi|188493236|ref|ZP_03000506.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli 53638] gi|191167602|ref|ZP_03029413.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli B7A] gi|191172151|ref|ZP_03033695.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli F11] gi|193064650|ref|ZP_03045729.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli E22] gi|194428349|ref|ZP_03060890.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli B171] gi|194433088|ref|ZP_03065370.1| ATP-dependent Clp protease adaptor protein ClpS [Shigella dysenteriae 1012] gi|194438739|ref|ZP_03070826.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli 101-1] gi|195939544|ref|ZP_03084926.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli O157:H7 str. EC4024] gi|208807982|ref|ZP_03250319.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli O157:H7 str. EC4206] gi|208815975|ref|ZP_03257154.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli O157:H7 str. EC4045] gi|208822627|ref|ZP_03262946.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli O157:H7 str. EC4042] gi|209399503|ref|YP_002269555.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli O157:H7 str. EC4115] gi|209918130|ref|YP_002292214.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli SE11] gi|217326428|ref|ZP_03442512.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli O157:H7 str. TW14588] gi|218553467|ref|YP_002386380.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli IAI1] gi|218557785|ref|YP_002390698.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli S88] gi|218688663|ref|YP_002396875.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli ED1a] gi|218694355|ref|YP_002402022.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli 55989] gi|218700603|ref|YP_002408232.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli IAI39] gi|218704310|ref|YP_002411829.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli UMN026] gi|227884153|ref|ZP_04001958.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli 83972] gi|238900140|ref|YP_002925936.1| regulatory protein for ClpA substrate specificity [Escherichia coli BW2952] gi|253774089|ref|YP_003036920.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254160996|ref|YP_003044104.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli B str. REL606] gi|254792082|ref|YP_003076919.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli O157:H7 str. TW14359] gi|256020998|ref|ZP_05434863.1| ATP-dependent Clp protease adaptor protein ClpS [Shigella sp. D9] gi|256023492|ref|ZP_05437357.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia sp. 4_1_40B] gi|260843132|ref|YP_003220910.1| regulatory protein ClpS for ClpA substrate specificity [Escherichia coli O103:H2 str. 12009] gi|260854173|ref|YP_003228064.1| regulatory protein ClpS for ClpA substrate specificity [Escherichia coli O26:H11 str. 11368] gi|260867054|ref|YP_003233456.1| regulatory protein ClpS for ClpA substrate specificity [Escherichia coli O111:H- str. 11128] gi|261225537|ref|ZP_05939818.1| regulatory protein for ClpA substrate specificity [Escherichia coli O157:H7 str. FRIK2000] gi|261258494|ref|ZP_05951027.1| regulatory protein ClpS for ClpA substrate specificity [Escherichia coli O157:H7 str. FRIK966] gi|291281885|ref|YP_003498703.1| ATP-dependent Clp protease adapter protein clpS [Escherichia coli O55:H7 str. CB9615] gi|293404189|ref|ZP_06648183.1| ClpS [Escherichia coli FVEC1412] gi|293409260|ref|ZP_06652836.1| conserved hypothetical protein [Escherichia coli B354] gi|293414164|ref|ZP_06656813.1| ATP-dependent Clp protease adapter protein ClpS [Escherichia coli B185] gi|293433179|ref|ZP_06661607.1| ATP-dependent Clp protease adapter protein ClpS [Escherichia coli B088] gi|297516224|ref|ZP_06934610.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli OP50] gi|298379970|ref|ZP_06989575.1| ATP-dependent Clp protease adapter protein ClpS [Escherichia coli FVEC1302] gi|300817017|ref|ZP_07097236.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli MS 107-1] gi|300823619|ref|ZP_07103746.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli MS 119-7] gi|300895696|ref|ZP_07114292.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli MS 198-1] gi|300902417|ref|ZP_07120399.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli MS 84-1] gi|300921087|ref|ZP_07137471.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli MS 115-1] gi|300922550|ref|ZP_07138651.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli MS 182-1] gi|300928422|ref|ZP_07143955.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli MS 187-1] gi|300935725|ref|ZP_07150693.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli MS 21-1] gi|300950109|ref|ZP_07164055.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli MS 116-1] gi|300954436|ref|ZP_07166888.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli MS 175-1] gi|300978555|ref|ZP_07174308.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli MS 45-1] gi|300991762|ref|ZP_07179625.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli MS 200-1] gi|301020523|ref|ZP_07184607.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli MS 69-1] gi|301024394|ref|ZP_07188081.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli MS 196-1] gi|301051189|ref|ZP_07198019.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli MS 185-1] gi|301305345|ref|ZP_07211440.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli MS 124-1] gi|301328605|ref|ZP_07221666.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli MS 78-1] gi|301646325|ref|ZP_07246213.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli MS 146-1] gi|306812669|ref|ZP_07446862.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli NC101] gi|307137509|ref|ZP_07496865.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli H736] gi|307311731|ref|ZP_07591371.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli W] gi|309783999|ref|ZP_07678643.1| ATP-dependent Clp protease adaptor ClpS family protein [Shigella dysenteriae 1617] gi|309795322|ref|ZP_07689740.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli MS 145-7] gi|312969050|ref|ZP_07783257.1| ATP-dependent Clp protease adaptor ClpS family protein [Escherichia coli 2362-75] gi|312971008|ref|ZP_07785187.1| ATP-dependent Clp protease adaptor ClpS family protein [Escherichia coli 1827-70] gi|331641402|ref|ZP_08342537.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli H736] gi|331646149|ref|ZP_08347252.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli M605] gi|331651900|ref|ZP_08352919.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli M718] gi|331656953|ref|ZP_08357915.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli TA206] gi|331662295|ref|ZP_08363218.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli TA143] gi|331667255|ref|ZP_08368120.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli TA271] gi|331676669|ref|ZP_08377365.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli H591] gi|331682390|ref|ZP_08383009.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli H299] gi|67462206|sp|P0A8Q6|CLPS_ECOLI RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|67462207|sp|P0A8Q7|CLPS_ECOL6 RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|67462208|sp|P0A8Q8|CLPS_ECO57 RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|67462209|sp|P0A8Q9|CLPS_SHIFL RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|122424438|sp|Q1RE41|CLPS_ECOUT RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|123049335|sp|Q0TJG8|CLPS_ECOL5 RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|123343208|sp|Q0T8P4|CLPS_SHIF8 RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|123560128|sp|Q323M1|CLPS_SHIBS RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|123562126|sp|Q32E01|CLPS_SHIDS RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|123617606|sp|Q3Z3N8|CLPS_SHISS RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|158512538|sp|A1A9B8|CLPS_ECOK1 RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|167008653|sp|A7ZJU9|CLPS_ECO24 RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|167008654|sp|A7ZYI5|CLPS_ECOHS RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|189082474|sp|B1IWP1|CLPS_ECOLC RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|226706563|sp|B7MHI7|CLPS_ECO45 RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|226706564|sp|B7NM96|CLPS_ECO7I RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|226706565|sp|B7M809|CLPS_ECO8A RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|226706566|sp|B7NAN2|CLPS_ECOLU RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|226706567|sp|B1LKM9|CLPS_ECOSM RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|229889820|sp|B1X822|CLPS_ECODH RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|238066650|sp|B5YSH7|CLPS_ECO5E RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|238066651|sp|B6I8V2|CLPS_ECOSE RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|238691691|sp|B2TUJ7|CLPS_SHIB3 RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|254763816|sp|B7LD74|CLPS_ECO55 RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|254763817|sp|B7MRT8|CLPS_ECO81 RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|259491246|sp|C4ZY53|CLPS_ECOBW RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|27573865|pdb|1MBU|C Chain C, Crystal Structure Analysis Of Clpsn Heterodimer gi|27573866|pdb|1MBU|D Chain D, Crystal Structure Analysis Of Clpsn Heterodimer gi|27573868|pdb|1MBV|B Chain B, Crystal Structure Analysis Of Clpsn Heterodimer Tetragonal Form gi|27573871|pdb|1MBX|C Chain C, Crystal Structure Analysis Of Clpsn With Transition Metal Ion Bound gi|27573872|pdb|1MBX|D Chain D, Crystal Structure Analysis Of Clpsn With Transition Metal Ion Bound gi|61679804|pdb|1R6O|C Chain C, Atp-Dependent Clp Protease Atp-Binding Subunit ClpaATP- Dependent Clp Protease Adaptor Protein Clps gi|61679805|pdb|1R6O|D Chain D, Atp-Dependent Clp Protease Atp-Binding Subunit ClpaATP- Dependent Clp Protease Adaptor Protein Clps gi|61679808|pdb|1R6Q|C Chain C, Clpns With Fragments gi|61679809|pdb|1R6Q|D Chain D, Clpns With Fragments gi|12513911|gb|AAG55263.1|AE005269_7 orf, hypothetical protein [Escherichia coli O157:H7 str. EDL933] gi|26107307|gb|AAN79490.1|AE016758_94 Protein yljA [Escherichia coli CFT073] gi|1787108|gb|AAC73968.1| regulatory protein for ClpA substrate specificity [Escherichia coli str. K-12 substr. MG1655] gi|4062464|dbj|BAA35600.1| regulatory protein for ClpA substrate specificity [Escherichia coli str. K12 substr. W3110] gi|13360426|dbj|BAB34390.1| hypothetical protein [Escherichia coli O157:H7 str. Sakai] gi|24051108|gb|AAN42474.1| orf, conserved hypothetical protein [Shigella flexneri 2a str. 301] gi|30040614|gb|AAP16346.1| hypothetical protein S0881 [Shigella flexneri 2a str. 2457T] gi|73854917|gb|AAZ87624.1| conserved hypothetical protein [Shigella sonnei Ss046] gi|81241744|gb|ABB62454.1| conserved hypothetical protein [Shigella dysenteriae Sd197] gi|81244779|gb|ABB65487.1| conserved hypothetical protein [Shigella boydii Sb227] gi|91071492|gb|ABE06373.1| ATP-dependent Clp protease adaptor protein [Escherichia coli UTI89] gi|110342674|gb|ABG68911.1| hypothetical protein YljA [Escherichia coli 536] gi|110614431|gb|ABF03098.1| conserved hypothetical protein [Shigella flexneri 5 str. 8401] gi|115512183|gb|ABJ00258.1| conserved hypothetical protein [Escherichia coli APEC O1] gi|157066084|gb|ABV05339.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli HS] gi|157078502|gb|ABV18210.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli E24377A] gi|169755644|gb|ACA78343.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli ATCC 8739] gi|169888375|gb|ACB02082.1| regulatory protein for ClpA substrate specificity [Escherichia coli str. K-12 substr. DH10B] gi|170521621|gb|ACB19799.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli SMS-3-5] gi|187429046|gb|ACD08320.1| ATP-dependent Clp protease adaptor protein ClpS [Shigella boydii CDC 3083-94] gi|187766992|gb|EDU30836.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli O157:H7 str. EC4196] gi|188013696|gb|EDU51818.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli O157:H7 str. EC4113] gi|188488435|gb|EDU63538.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli 53638] gi|188998902|gb|EDU67888.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli O157:H7 str. EC4076] gi|189354287|gb|EDU72706.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli O157:H7 str. EC4401] gi|189361171|gb|EDU79590.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli O157:H7 str. EC4486] gi|189371156|gb|EDU89572.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli O157:H7 str. EC869] gi|189375364|gb|EDU93780.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli O157:H7 str. EC508] gi|190902363|gb|EDV62101.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli B7A] gi|190907678|gb|EDV67273.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli F11] gi|192927707|gb|EDV82322.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli E22] gi|194413564|gb|EDX29845.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli B171] gi|194418585|gb|EDX34672.1| ATP-dependent Clp protease adaptor protein ClpS [Shigella dysenteriae 1012] gi|194422371|gb|EDX38371.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli 101-1] gi|208727783|gb|EDZ77384.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli O157:H7 str. EC4206] gi|208732623|gb|EDZ81311.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli O157:H7 str. EC4045] gi|208738112|gb|EDZ85795.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli O157:H7 str. EC4042] gi|209160903|gb|ACI38336.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli O157:H7 str. EC4115] gi|209775128|gb|ACI85876.1| hypothetical protein ECs0967 [Escherichia coli] gi|209775130|gb|ACI85877.1| hypothetical protein ECs0967 [Escherichia coli] gi|209775132|gb|ACI85878.1| hypothetical protein ECs0967 [Escherichia coli] gi|209775134|gb|ACI85879.1| hypothetical protein ECs0967 [Escherichia coli] gi|209775136|gb|ACI85880.1| hypothetical protein ECs0967 [Escherichia coli] gi|209911389|dbj|BAG76463.1| conserved hypothetical protein [Escherichia coli SE11] gi|217322649|gb|EEC31073.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli O157:H7 str. TW14588] gi|218351087|emb|CAU96791.1| regulatory protein for ClpA substrate specificity [Escherichia coli 55989] gi|218360235|emb|CAQ97785.1| regulatory protein for ClpA substrate specificity [Escherichia coli IAI1] gi|218364554|emb|CAR02238.1| regulatory protein for ClpA substrate specificity [Escherichia coli S88] gi|218370589|emb|CAR18396.1| regulatory protein for ClpA substrate specificity [Escherichia coli IAI39] gi|218426227|emb|CAR07052.1| regulatory protein for ClpA substrate specificity [Escherichia coli ED1a] gi|218431407|emb|CAR12285.1| regulatory protein for ClpA substrate specificity [Escherichia coli UMN026] gi|222032610|emb|CAP75349.1| ATP-dependent Clp protease adaptor protein clpS [Escherichia coli LF82] gi|227838905|gb|EEJ49371.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli 83972] gi|238863441|gb|ACR65439.1| regulatory protein for ClpA substrate specificity [Escherichia coli BW2952] gi|242376696|emb|CAQ31409.1| specificity factor for ClpA-ClpP chaperone-protease complex [Escherichia coli BL21(DE3)] gi|253325133|gb|ACT29735.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253972897|gb|ACT38568.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli B str. REL606] gi|253977111|gb|ACT42781.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli BL21(DE3)] gi|254591482|gb|ACT70843.1| regulatory protein for ClpA substrate specificity [Escherichia coli O157:H7 str. TW14359] gi|257752822|dbj|BAI24324.1| regulatory protein ClpS for ClpA substrate specificity [Escherichia coli O26:H11 str. 11368] gi|257758279|dbj|BAI29776.1| regulatory protein ClpS for ClpA substrate specificity [Escherichia coli O103:H2 str. 12009] gi|257763410|dbj|BAI34905.1| regulatory protein ClpS for ClpA substrate specificity [Escherichia coli O111:H- str. 11128] gi|260449972|gb|ACX40394.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli DH1] gi|281600210|gb|ADA73194.1| ATP-dependent Clp protease adapter protein clpS [Shigella flexneri 2002017] gi|284920735|emb|CBG33798.1| ATP-dependent Clp protease adaptor protein [Escherichia coli 042] gi|290761758|gb|ADD55719.1| ATP-dependent Clp protease adapter protein clpS [Escherichia coli O55:H7 str. CB9615] gi|291323998|gb|EFE63420.1| ATP-dependent Clp protease adapter protein ClpS [Escherichia coli B088] gi|291428775|gb|EFF01800.1| ClpS [Escherichia coli FVEC1412] gi|291434222|gb|EFF07195.1| ATP-dependent Clp protease adapter protein ClpS [Escherichia coli B185] gi|291469728|gb|EFF12212.1| conserved hypothetical protein [Escherichia coli B354] gi|294493941|gb|ADE92697.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli IHE3034] gi|298279668|gb|EFI21176.1| ATP-dependent Clp protease adapter protein ClpS [Escherichia coli FVEC1302] gi|299880401|gb|EFI88612.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli MS 196-1] gi|300297210|gb|EFJ53595.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli MS 185-1] gi|300305516|gb|EFJ60036.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli MS 200-1] gi|300318586|gb|EFJ68370.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli MS 175-1] gi|300360365|gb|EFJ76235.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli MS 198-1] gi|300398656|gb|EFJ82194.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli MS 69-1] gi|300405449|gb|EFJ88987.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli MS 84-1] gi|300409634|gb|EFJ93172.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli MS 45-1] gi|300411938|gb|EFJ95248.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli MS 115-1] gi|300421096|gb|EFK04407.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli MS 182-1] gi|300450524|gb|EFK14144.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli MS 116-1] gi|300459088|gb|EFK22581.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli MS 21-1] gi|300463585|gb|EFK27078.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli MS 187-1] gi|300523819|gb|EFK44888.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli MS 119-7] gi|300530369|gb|EFK51431.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli MS 107-1] gi|300839363|gb|EFK67123.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli MS 124-1] gi|300844997|gb|EFK72757.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli MS 78-1] gi|301075428|gb|EFK90234.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli MS 146-1] gi|305853432|gb|EFM53871.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli NC101] gi|306908286|gb|EFN38785.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli W] gi|307552724|gb|ADN45499.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli ABU 83972] gi|307627693|gb|ADN71997.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli UM146] gi|308120972|gb|EFO58234.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli MS 145-7] gi|308928142|gb|EFP73605.1| ATP-dependent Clp protease adaptor ClpS family protein [Shigella dysenteriae 1617] gi|309701158|emb|CBJ00458.1| ATP-dependent Clp protease adaptor protein [Escherichia coli ETEC H10407] gi|310336769|gb|EFQ01936.1| ATP-dependent Clp protease adaptor ClpS family protein [Escherichia coli 1827-70] gi|312286452|gb|EFR14365.1| ATP-dependent Clp protease adaptor ClpS family protein [Escherichia coli 2362-75] gi|312945399|gb|ADR26226.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli O83:H1 str. NRG 857C] gi|313650206|gb|EFS14618.1| ATP-dependent Clp protease adaptor ClpS family protein [Shigella flexneri 2a str. 2457T] gi|315060167|gb|ADT74494.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli W] gi|315135530|dbj|BAJ42689.1| ATP-dependent Clp protease adapter protein clpS [Escherichia coli DH1] gi|315257919|gb|EFU37887.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli MS 85-1] gi|315287285|gb|EFU46696.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli MS 110-3] gi|315291075|gb|EFU50438.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli MS 153-1] gi|315296657|gb|EFU55952.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli MS 16-3] gi|315619193|gb|EFU99772.1| ATP-dependent Clp protease adaptor ClpS family protein [Escherichia coli 3431] gi|320175322|gb|EFW50428.1| ATP-dependent Clp protease adaptor protein ClpS [Shigella dysenteriae CDC 74-1112] gi|320180599|gb|EFW55528.1| ATP-dependent Clp protease adaptor protein ClpS [Shigella boydii ATCC 9905] gi|320183180|gb|EFW58038.1| ATP-dependent Clp protease adaptor protein ClpS [Shigella flexneri CDC 796-83] gi|320192633|gb|EFW67274.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli O157:H7 str. EC1212] gi|320196624|gb|EFW71247.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli WV_060327] gi|320202276|gb|EFW76847.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli EC4100B] gi|320637752|gb|EFX07544.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli O157:H7 str. G5101] gi|320642875|gb|EFX12076.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli O157:H- str. 493-89] gi|320648332|gb|EFX16987.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli O157:H- str. H 2687] gi|320654170|gb|EFX22238.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320659794|gb|EFX27350.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli O55:H7 str. USDA 5905] gi|320664264|gb|EFX31415.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli O157:H7 str. LSU-61] gi|323155745|gb|EFZ41914.1| ATP-dependent Clp protease adaptor ClpS family protein [Escherichia coli EPECa14] gi|323159506|gb|EFZ45486.1| ATP-dependent Clp protease adaptor protein ClpS family protein [Escherichia coli E128010] gi|323165818|gb|EFZ51604.1| ATP-dependent Clp protease adaptor ClpS family protein [Shigella sonnei 53G] gi|323172148|gb|EFZ57786.1| ATP-dependent Clp protease adaptor protein ClpS family protein [Escherichia coli LT-68] gi|323175497|gb|EFZ61092.1| ATP-dependent Clp protease adaptor protein ClpS family protein [Escherichia coli 1180] gi|323185154|gb|EFZ70519.1| ATP-dependent Clp protease adaptor protein ClpS family protein [Escherichia coli 1357] gi|323379276|gb|ADX51544.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli KO11] gi|323937988|gb|EGB34250.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli E1520] gi|323942798|gb|EGB38963.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli E482] gi|323947161|gb|EGB43171.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli H120] gi|323953415|gb|EGB49281.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli H252] gi|323958183|gb|EGB53892.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli H263] gi|323962994|gb|EGB58566.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli H489] gi|323967317|gb|EGB62740.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli M863] gi|323969619|gb|EGB64906.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli TA007] gi|323976732|gb|EGB71820.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli TW10509] gi|324009833|gb|EGB79052.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli MS 57-2] gi|324013007|gb|EGB82226.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli MS 60-1] gi|324019029|gb|EGB88248.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli MS 117-3] gi|324116095|gb|EGC10019.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli E1167] gi|326338224|gb|EGD62053.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli O157:H7 str. 1125] gi|326346201|gb|EGD69939.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli O157:H7 str. 1044] gi|327253669|gb|EGE65298.1| ATP-dependent Clp protease adaptor protein ClpS family protein [Escherichia coli STEC_7v] gi|330910663|gb|EGH39173.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli AA86] gi|331038200|gb|EGI10420.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli H736] gi|331044901|gb|EGI17028.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli M605] gi|331050178|gb|EGI22236.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli M718] gi|331055201|gb|EGI27210.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli TA206] gi|331060717|gb|EGI32681.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli TA143] gi|331065611|gb|EGI37504.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli TA271] gi|331075358|gb|EGI46656.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli H591] gi|331080021|gb|EGI51200.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli H299] gi|332091077|gb|EGI96167.1| ATP-dependent Clp protease adaptor protein ClpS family protein [Shigella dysenteriae 155-74] gi|332097186|gb|EGJ02169.1| ATP-dependent Clp protease adaptor protein ClpS family protein [Shigella boydii 3594-74] gi|332104576|gb|EGJ07922.1| regulatory protein for ClpA substrate specificity [Shigella sp. D9] Length = 106 Score = 158 bits (400), Expect = 2e-37, Method: Composition-based stats. Identities = 48/105 (45%), Positives = 69/105 (65%), Gaps = 2/105 (1%) Query: 33 NKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKC 92 +FD + +VR + ++ P +Y+V+LVND+YTPMEFVI VLQ FF D E A Sbjct: 3 KTNDWLDFDQLAEEKVRDA--LKPPSMYKVILVNDDYTPMEFVIDVLQKFFSYDVERATQ 60 Query: 93 IMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +ML VH+QG CGV+ E+AE KV V Y+R++++PL C +E+ Sbjct: 61 LMLAVHYQGKAICGVFTAEVAETKVAMVNKYARENEHPLLCTLEK 105 >gi|166712083|ref|ZP_02243290.1| ATP-dependent Clp protease adaptor protein ClpS [Xanthomonas oryzae pv. oryzicola BLS256] Length = 112 Score = 158 bits (400), Expect = 2e-37, Method: Composition-based stats. Identities = 48/87 (55%), Positives = 61/87 (70%) Query: 51 SSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAY 110 +V P Y+VLL+ND+YTPM+FV+ VLQ FF + E A IML VH +G G CGVY+ Sbjct: 25 KPEVAPPPRYQVLLLNDDYTPMDFVVTVLQQFFNLNLEQATQIMLHVHTRGRGVCGVYSR 84 Query: 111 EIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 E+AE KV QV +SR +Q+PL C MEQ Sbjct: 85 EVAESKVAQVNEFSRMNQHPLLCTMEQ 111 >gi|329894886|ref|ZP_08270685.1| ATP-dependent Clp protease adaptor protein ClpS [gamma proteobacterium IMCC3088] gi|328922615|gb|EGG29950.1| ATP-dependent Clp protease adaptor protein ClpS [gamma proteobacterium IMCC3088] Length = 113 Score = 158 bits (400), Expect = 2e-37, Method: Composition-based stats. Identities = 45/107 (42%), Positives = 68/107 (63%), Gaps = 1/107 (0%) Query: 32 MNKKGIAEFDNCLDSEVR-FSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETA 90 M+++ + D+ V ++ P LY+V+L+ND+YTPMEFV+ VL+ FF + E A Sbjct: 1 MSEQHPDQHDDGTGLAVAPAKPALKKPPLYKVVLMNDDYTPMEFVVLVLERFFRMNREKA 60 Query: 91 KCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 IML VH QG G CG+Y ++AE K +V +SR++Q+PL C +E Sbjct: 61 TQIMLAVHTQGKGVCGIYPRDVAETKAYEVNEFSRENQHPLLCEVEP 107 >gi|251789967|ref|YP_003004688.1| ATP-dependent Clp protease adaptor protein ClpS [Dickeya zeae Ech1591] gi|247538588|gb|ACT07209.1| ATP-dependent Clp protease adaptor protein ClpS [Dickeya zeae Ech1591] Length = 106 Score = 158 bits (400), Expect = 2e-37, Method: Composition-based stats. Identities = 45/98 (45%), Positives = 66/98 (67%) Query: 40 FDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHH 99 ++ ++ ++ P +Y+V+L ND+YTPMEFVI VLQ FF D E A +ML VH+ Sbjct: 8 PQTDDLTKEHYTEALQPPSMYKVILNNDDYTPMEFVIDVLQKFFSYDIERATQLMLTVHY 67 Query: 100 QGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 QG CGVY+ E+AE KV QV Y+R++++PL C +E+ Sbjct: 68 QGKAICGVYSAEVAETKVEQVNRYARENEHPLLCTLEK 105 >gi|119384493|ref|YP_915549.1| ATP-dependent Clp protease adaptor protein ClpS [Paracoccus denitrificans PD1222] gi|119374260|gb|ABL69853.1| ATP-dependent Clp protease adaptor protein ClpS [Paracoccus denitrificans PD1222] Length = 105 Score = 158 bits (400), Expect = 2e-37, Method: Composition-based stats. Identities = 49/106 (46%), Positives = 72/106 (67%), Gaps = 3/106 (2%) Query: 33 NKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKC 92 N+ G E ++ V+ + + P +Y+VLL+ND++TPMEFV+HVL+ F +H A Sbjct: 3 NRPGDRE---EVELGVKTRPRTQRPPMYKVLLLNDDFTPMEFVVHVLERLFNMNHAQAIE 59 Query: 93 IMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 IML VH +GI GV+++EIAE KV QVM +R+ Q+PLQC ME++ Sbjct: 60 IMLTVHRKGIAVVGVFSHEIAETKVAQVMELARRQQHPLQCTMEKE 105 >gi|319408390|emb|CBI82045.1| Clp protease adaptor protein [Bartonella schoenbuchensis R1] Length = 119 Score = 158 bits (400), Expect = 2e-37, Method: Composition-based stats. Identities = 55/114 (48%), Positives = 78/114 (68%), Gaps = 2/114 (1%) Query: 23 SFIFMADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNF 82 + M + + ++D + +V+ K + PKLYRVLL+ND+YTPM+FV+ +L++F Sbjct: 8 ALHTMQNEKGKGWSEDKYDTIVIPQVK--PKFQKPKLYRVLLLNDDYTPMDFVVFILESF 65 Query: 83 FYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIME 136 F K E IML VH G+GECGVY YE+AEMKV QVM +RQ+++PLQC+ME Sbjct: 66 FKKSFEETTRIMLNVHQNGVGECGVYTYEVAEMKVVQVMECARQNEHPLQCVME 119 >gi|91788801|ref|YP_549753.1| ATP-dependent Clp protease adaptor protein ClpS [Polaromonas sp. JS666] gi|91698026|gb|ABE44855.1| ATP-dependent Clp protease adaptor protein ClpS [Polaromonas sp. JS666] Length = 125 Score = 158 bits (400), Expect = 2e-37, Method: Composition-based stats. Identities = 46/90 (51%), Positives = 66/90 (73%) Query: 48 VRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGV 107 R K + P++Y+V+L+ND+YTPMEFV+ +LQ FF KDHETA IMLK+H G G CGV Sbjct: 34 ERRPQKTKPPQMYQVVLLNDDYTPMEFVVVILQEFFNKDHETATQIMLKIHLDGKGVCGV 93 Query: 108 YAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 ++ ++A KV+QV +R++ +PLQC+ E Sbjct: 94 FSKDVAATKVDQVTEAARKNGHPLQCVSEP 123 >gi|296135869|ref|YP_003643111.1| ATP-dependent Clp protease adaptor protein ClpS [Thiomonas intermedia K12] gi|294340063|emb|CAZ88431.1| ATP-dependent Clp protease adaptor protein clpS [Thiomonas sp. 3As] gi|295795991|gb|ADG30781.1| ATP-dependent Clp protease adaptor protein ClpS [Thiomonas intermedia K12] Length = 108 Score = 158 bits (400), Expect = 3e-37, Method: Composition-based stats. Identities = 49/96 (51%), Positives = 67/96 (69%) Query: 41 DNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQ 100 D R + +++ P +Y+V+L+NDN+TPMEFV+ V+Q++F KD ETA IMLKVH Sbjct: 11 DGGAVVVERQTLRLKPPAMYQVILLNDNFTPMEFVVVVIQHYFNKDRETATQIMLKVHRD 70 Query: 101 GIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIME 136 G G CGVY +IA KV QV+ +RQ +PLQC+ME Sbjct: 71 GRGVCGVYTRDIAATKVEQVIGAARQAGHPLQCVME 106 >gi|319787138|ref|YP_004146613.1| ATP-dependent Clp protease adaptor protein ClpS [Pseudoxanthomonas suwonensis 11-1] gi|317465650|gb|ADV27382.1| ATP-dependent Clp protease adaptor protein ClpS [Pseudoxanthomonas suwonensis 11-1] Length = 108 Score = 158 bits (400), Expect = 3e-37, Method: Composition-based stats. Identities = 48/107 (44%), Positives = 68/107 (63%), Gaps = 1/107 (0%) Query: 32 MNKKGIAEFDNCLDSEVRF-SSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETA 90 M+ E D+ + V ++ P +Y+V+L+ND+YTPM+FV+ VLQ FF D E A Sbjct: 1 MSSTPRHEHDHEHGTLVDPGRPEIAPPPMYQVILLNDDYTPMDFVVAVLQQFFGLDLERA 60 Query: 91 KCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +ML VH +G G CGV+ E+AE KV QV +SR +Q+PL C ME+ Sbjct: 61 TQVMLHVHTRGRGVCGVFTREVAESKVAQVNEFSRMNQHPLLCTMEK 107 >gi|237732131|ref|ZP_04562612.1| ATP-dependent Clp protease adapter protein clpS [Citrobacter sp. 30_2] gi|226907670|gb|EEH93588.1| ATP-dependent Clp protease adapter protein clpS [Citrobacter sp. 30_2] Length = 106 Score = 158 bits (400), Expect = 3e-37, Method: Composition-based stats. Identities = 48/105 (45%), Positives = 68/105 (64%), Gaps = 2/105 (1%) Query: 33 NKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKC 92 +FD L +E + ++ P +Y+V+LVND+YTPMEFVI VLQ FF D E A Sbjct: 3 KTNDWLDFD--LLAEDKLRDALKPPSMYKVILVNDDYTPMEFVIDVLQKFFSYDVERATQ 60 Query: 93 IMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +ML VH+QG CGV+ E+AE KV V Y+R++++PL C +E+ Sbjct: 61 LMLAVHYQGKAICGVFTAEVAETKVAMVNKYARENEHPLLCTLEK 105 >gi|188534289|ref|YP_001908086.1| ATP-dependent Clp protease adaptor protein ClpS [Erwinia tasmaniensis Et1/99] gi|238689683|sp|B2VC66|CLPS_ERWT9 RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|188029331|emb|CAO97208.1| ATP-dependent Clp protease adaptor protein [Erwinia tasmaniensis Et1/99] Length = 106 Score = 158 bits (400), Expect = 3e-37, Method: Composition-based stats. Identities = 46/105 (43%), Positives = 66/105 (62%), Gaps = 2/105 (1%) Query: 33 NKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKC 92 F+ D +VR +++ P +Y+V+L ND++TPMEFVI VLQ FF D E A Sbjct: 3 KTNDWLNFEQLADDKVR--EELKPPSMYKVILNNDDFTPMEFVIDVLQKFFSYDIERATQ 60 Query: 93 IMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +ML VH+QG CGV+ E+AE KV V Y+R +++PL C +E+ Sbjct: 61 LMLTVHYQGKAICGVFTAEVAETKVAHVNKYARDNEHPLLCTLEK 105 >gi|257095587|ref|YP_003169228.1| ATP-dependent Clp protease adaptor protein ClpS [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257048111|gb|ACV37299.1| ATP-dependent Clp protease adaptor protein ClpS [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 102 Score = 158 bits (400), Expect = 3e-37, Method: Composition-based stats. Identities = 45/86 (52%), Positives = 64/86 (74%) Query: 52 SKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYE 111 ++++ P LY+VLL+ND++TPM+FVI VLQ FF D E A IMLKVH +G G CGV+ + Sbjct: 16 TQLKPPPLYKVLLLNDDFTPMDFVIVVLQRFFGMDREHATRIMLKVHTEGRGVCGVFPRD 75 Query: 112 IAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +A KV QV ++R +Q+PL C+ME+ Sbjct: 76 VAATKVEQVTTFARSNQHPLACVMEE 101 >gi|304397051|ref|ZP_07378930.1| ATP-dependent Clp protease adaptor protein ClpS [Pantoea sp. aB] gi|304355200|gb|EFM19568.1| ATP-dependent Clp protease adaptor protein ClpS [Pantoea sp. aB] Length = 106 Score = 158 bits (400), Expect = 3e-37, Method: Composition-based stats. Identities = 47/107 (43%), Positives = 68/107 (63%), Gaps = 2/107 (1%) Query: 31 RMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETA 90 N F++ + +VR ++ P +Y+V+L ND+YTPMEFVI V+Q FF D E A Sbjct: 1 MANTNDWLNFEHLAEDKVREG--LKPPSMYKVILNNDDYTPMEFVIDVVQKFFSYDVERA 58 Query: 91 KCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +MLKVH+ G CGV+ E+AE K QV NY+R++ +PL C +E+ Sbjct: 59 TQLMLKVHYHGKAICGVFTAEVAETKAAQVNNYARENHHPLLCTLEK 105 >gi|119944513|ref|YP_942193.1| ATP-dependent Clp protease adaptor protein ClpS [Psychromonas ingrahamii 37] gi|119863117|gb|ABM02594.1| ATP-dependent Clp protease adaptor protein ClpS [Psychromonas ingrahamii 37] Length = 108 Score = 158 bits (400), Expect = 3e-37, Method: Composition-based stats. Identities = 52/107 (48%), Positives = 76/107 (71%) Query: 32 MNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAK 91 M+ K + N D+ + +K+R P +Y VLL ND+YTPM+FVI VLQ FF D++ A Sbjct: 1 MSDKKAPKTVNKSDTIEKVETKLRPPSMYNVLLHNDDYTPMDFVIDVLQQFFRLDNQKAT 60 Query: 92 CIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 +ML VH++ +G CG ++ EIAE KV QVMNY+RQ+++PL+C ME++ Sbjct: 61 EVMLNVHYKEVGICGTFSAEIAETKVMQVMNYARQNEHPLRCSMEKE 107 >gi|332162228|ref|YP_004298805.1| ATP-dependent Clp protease adaptor protein ClpS [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|318606291|emb|CBY27789.1| ATP-dependent Clp protease adaptor protein ClpS [Yersinia enterocolitica subsp. palearctica Y11] gi|325666458|gb|ADZ43102.1| ATP-dependent Clp protease adaptor protein ClpS [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330860566|emb|CBX70865.1| ATP-dependent Clp protease adapter protein clpS [Yersinia enterocolitica W22703] Length = 115 Score = 158 bits (400), Expect = 3e-37, Method: Composition-based stats. Identities = 44/105 (41%), Positives = 65/105 (61%), Gaps = 2/105 (1%) Query: 33 NKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKC 92 F++ + + ++ P +Y+V+L ND+YTPMEFVI VLQ FF D E A Sbjct: 12 KNNDWLNFEHLVKD--KQIEALKPPSMYKVILNNDDYTPMEFVIDVLQKFFSYDIERATQ 69 Query: 93 IMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +ML VH+QG CGV+ E+AE KV V Y+R++++PL C +E+ Sbjct: 70 LMLNVHYQGKAICGVFTAEVAETKVAHVNQYARENEHPLLCTLEK 114 >gi|193071768|ref|ZP_03052664.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli E110019] gi|192954925|gb|EDV85432.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli E110019] Length = 106 Score = 158 bits (399), Expect = 3e-37, Method: Composition-based stats. Identities = 48/105 (45%), Positives = 69/105 (65%), Gaps = 2/105 (1%) Query: 33 NKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKC 92 +FD + +VR + ++ P +Y+V+LVND+YTPMEFVI VLQ FF D E A Sbjct: 3 KTNDWLDFDQVAEEKVRDA--LKPPSMYKVILVNDDYTPMEFVIDVLQKFFSYDVERATQ 60 Query: 93 IMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +ML VH+QG CGV+ E+AE KV V Y+R++++PL C +E+ Sbjct: 61 LMLAVHYQGKAICGVFTAEVAETKVAMVNKYARENEHPLLCTLEK 105 >gi|91229058|ref|ZP_01262884.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio alginolyticus 12G01] gi|269967653|ref|ZP_06181703.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio alginolyticus 40B] gi|91187451|gb|EAS73791.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio alginolyticus 12G01] gi|269827740|gb|EEZ82024.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio alginolyticus 40B] Length = 106 Score = 158 bits (399), Expect = 3e-37, Method: Composition-based stats. Identities = 51/93 (54%), Positives = 67/93 (72%) Query: 45 DSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGE 104 D R S+KV+ PKLY V+L ND+YTPM+FVI VL+ FF D + A IML+VH++G Sbjct: 13 DLLERESTKVQPPKLYNVVLNNDDYTPMDFVIEVLERFFSHDIDKATQIMLQVHYEGKAI 72 Query: 105 CGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 CG Y+ EIAE KV QV Y+R++++PL C MEQ Sbjct: 73 CGTYSAEIAETKVAQVTMYARENEHPLLCTMEQ 105 >gi|291613434|ref|YP_003523591.1| ATP-dependent Clp protease adaptor protein ClpS [Sideroxydans lithotrophicus ES-1] gi|291583546|gb|ADE11204.1| ATP-dependent Clp protease adaptor protein ClpS [Sideroxydans lithotrophicus ES-1] Length = 100 Score = 158 bits (399), Expect = 3e-37, Method: Composition-based stats. Identities = 43/93 (46%), Positives = 65/93 (69%) Query: 45 DSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGE 104 + + SK + PKLY+V+L+ND++T MEFVI VL+ FF E A +ML++H++G Sbjct: 7 NVNLLERSKTKPPKLYKVILLNDDFTTMEFVIEVLRIFFSMGQERATQVMLQIHNEGSAV 66 Query: 105 CGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 CGVY +IAE KV+QV +++QH +PL+C E+ Sbjct: 67 CGVYPKDIAETKVSQVSEFAKQHGHPLRCQTEE 99 >gi|117619917|ref|YP_856387.1| ATP-dependent Clp protease adaptor protein ClpS [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|158512298|sp|A0KJD6|CLPS_AERHH RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|117561324|gb|ABK38272.1| ATP-dependent Clp protease adaptor protein ClpS [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 105 Score = 158 bits (399), Expect = 3e-37, Method: Composition-based stats. Identities = 44/93 (47%), Positives = 62/93 (66%) Query: 45 DSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGE 104 + +K++ P +Y+V+L ND+YTPMEFV+ VLQ FF D + A +ML VH+ G G Sbjct: 12 EIAEAEKTKLQPPPMYKVVLNNDDYTPMEFVVEVLQKFFGMDLDKATQVMLSVHYSGKGV 71 Query: 105 CGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 CG + EIAE KV QV Y+R +++PL C ME+ Sbjct: 72 CGTFTAEIAETKVVQVNTYARNNEHPLLCTMEK 104 >gi|323190703|gb|EFZ75972.1| ATP-dependent Clp protease adaptor protein ClpS family protein [Escherichia coli RN587/1] Length = 106 Score = 158 bits (399), Expect = 3e-37, Method: Composition-based stats. Identities = 48/105 (45%), Positives = 69/105 (65%), Gaps = 2/105 (1%) Query: 33 NKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKC 92 +FD + +VR + ++ P +Y+V+LVND+YTPMEFVI VLQ FF D E A Sbjct: 3 KTNDWLDFDQLAEEKVRDA--LKPPSMYKVILVNDDYTPMEFVIDVLQKFFSYDVERATQ 60 Query: 93 IMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +ML VH+QG CGV+ E+AE KV V Y+R++++PL C +E+ Sbjct: 61 LMLAVHYQGKAICGVFTAEVAETKVTMVNKYARENEHPLLCTLEK 105 >gi|28897787|ref|NP_797392.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio parahaemolyticus RIMD 2210633] gi|153837344|ref|ZP_01990011.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio parahaemolyticus AQ3810] gi|260365333|ref|ZP_05777884.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio parahaemolyticus K5030] gi|260876951|ref|ZP_05889306.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio parahaemolyticus AN-5034] gi|260897908|ref|ZP_05906404.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio parahaemolyticus Peru-466] gi|260901417|ref|ZP_05909812.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio parahaemolyticus AQ4037] gi|33301900|sp|Q87QY5|CLPS_VIBPA RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|28806000|dbj|BAC59276.1| conserved hypothetical protein [Vibrio parahaemolyticus RIMD 2210633] gi|149749375|gb|EDM60148.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio parahaemolyticus AQ3810] gi|308085449|gb|EFO35144.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio parahaemolyticus Peru-466] gi|308093908|gb|EFO43603.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio parahaemolyticus AN-5034] gi|308107509|gb|EFO45049.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio parahaemolyticus AQ4037] gi|308112689|gb|EFO50229.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio parahaemolyticus K5030] gi|328473237|gb|EGF44085.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio parahaemolyticus 10329] Length = 106 Score = 158 bits (399), Expect = 3e-37, Method: Composition-based stats. Identities = 52/93 (55%), Positives = 67/93 (72%) Query: 45 DSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGE 104 D R S+KV+ PKLY V+L ND+YTPM+FVI VL+ FF D + A IMLKVH++G Sbjct: 13 DLLERESTKVQPPKLYNVVLNNDDYTPMDFVIEVLERFFSHDIDKATQIMLKVHYEGKAV 72 Query: 105 CGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 CG Y+ EIAE KV QV Y+R++++PL C MEQ Sbjct: 73 CGTYSAEIAETKVAQVTMYARENEHPLLCTMEQ 105 >gi|22126687|ref|NP_670110.1| ATP-dependent Clp protease adaptor protein ClpS [Yersinia pestis KIM 10] gi|45441053|ref|NP_992592.1| ATP-dependent Clp protease adaptor protein ClpS [Yersinia pestis biovar Microtus str. 91001] gi|51595733|ref|YP_069924.1| ATP-dependent Clp protease adaptor protein ClpS [Yersinia pseudotuberculosis IP 32953] gi|108806654|ref|YP_650570.1| ATP-dependent Clp protease adaptor protein ClpS [Yersinia pestis Antiqua] gi|108812774|ref|YP_648541.1| ATP-dependent Clp protease adaptor protein ClpS [Yersinia pestis Nepal516] gi|145599600|ref|YP_001163676.1| ATP-dependent Clp protease adaptor protein ClpS [Yersinia pestis Pestoides F] gi|149366624|ref|ZP_01888658.1| hypothetical protein YPE_1859 [Yersinia pestis CA88-4125] gi|153948682|ref|YP_001401572.1| ATP-dependent Clp protease adaptor protein ClpS [Yersinia pseudotuberculosis IP 31758] gi|162418231|ref|YP_001606105.1| ATP-dependent Clp protease adaptor protein ClpS [Yersinia pestis Angola] gi|165924312|ref|ZP_02220144.1| ATP-dependent Clp protease adaptor protein ClpS [Yersinia pestis biovar Orientalis str. F1991016] gi|165938973|ref|ZP_02227526.1| ATP-dependent Clp protease adaptor protein ClpS [Yersinia pestis biovar Orientalis str. IP275] gi|166009809|ref|ZP_02230707.1| ATP-dependent Clp protease adaptor protein ClpS [Yersinia pestis biovar Antiqua str. E1979001] gi|166211395|ref|ZP_02237430.1| ATP-dependent Clp protease adaptor protein ClpS [Yersinia pestis biovar Antiqua str. B42003004] gi|167399829|ref|ZP_02305347.1| ATP-dependent Clp protease adaptor protein ClpS [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167419808|ref|ZP_02311561.1| ATP-dependent Clp protease adaptor protein ClpS [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167424070|ref|ZP_02315823.1| ATP-dependent Clp protease adaptor protein ClpS [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167469762|ref|ZP_02334466.1| ATP-dependent Clp protease adaptor protein ClpS [Yersinia pestis FV-1] gi|170024918|ref|YP_001721423.1| ATP-dependent Clp protease adaptor protein ClpS [Yersinia pseudotuberculosis YPIII] gi|186894810|ref|YP_001871922.1| ATP-dependent Clp protease adaptor protein ClpS [Yersinia pseudotuberculosis PB1/+] gi|218928515|ref|YP_002346390.1| ATP-dependent Clp protease adaptor protein ClpS [Yersinia pestis CO92] gi|229841334|ref|ZP_04461493.1| regulatory protein for ClpA substrate specificity [Yersinia pestis biovar Orientalis str. PEXU2] gi|229843438|ref|ZP_04463584.1| regulatory protein for ClpA substrate specificity [Yersinia pestis biovar Orientalis str. India 195] gi|229895811|ref|ZP_04510981.1| regulatory protein for ClpA substrate specificity [Yersinia pestis Pestoides A] gi|229903187|ref|ZP_04518300.1| regulatory protein for ClpA substrate specificity [Yersinia pestis Nepal516] gi|270486980|ref|ZP_06204054.1| ATP-dependent Clp protease adaptor protein ClpS [Yersinia pestis KIM D27] gi|294503358|ref|YP_003567420.1| ATP-dependent Clp protease adaptor protein ClpS [Yersinia pestis Z176003] gi|21542306|sp|Q8ZGD5|CLPS_YERPE RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|67460254|sp|Q66CL0|CLPS_YERPS RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|122383658|sp|Q1CA97|CLPS_YERPA RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|122384459|sp|Q1CGD9|CLPS_YERPN RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|158514101|sp|A4TN41|CLPS_YERPP RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|167008657|sp|A7FJZ4|CLPS_YERP3 RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|238687306|sp|A9R4Y5|CLPS_YERPG RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|238688568|sp|B1JRG2|CLPS_YERPY RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|238691444|sp|B2KA00|CLPS_YERPB RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|21959704|gb|AAM86361.1|AE013884_8 hypothetical protein y2810 [Yersinia pestis KIM 10] gi|45435912|gb|AAS61469.1| conserved hypothetical protein [Yersinia pestis biovar Microtus str. 91001] gi|51589015|emb|CAH20633.1| conserved hypothetical protein [Yersinia pseudotuberculosis IP 32953] gi|108776422|gb|ABG18941.1| hypothetical protein YPN_2613 [Yersinia pestis Nepal516] gi|108778567|gb|ABG12625.1| hypothetical protein YPA_0657 [Yersinia pestis Antiqua] gi|115347126|emb|CAL20019.1| conserved hypothetical protein [Yersinia pestis CO92] gi|145211296|gb|ABP40703.1| hypothetical protein YPDSF_2328 [Yersinia pestis Pestoides F] gi|149290998|gb|EDM41073.1| hypothetical protein YPE_1859 [Yersinia pestis CA88-4125] gi|152960177|gb|ABS47638.1| ATP-dependent Clp protease adaptor protein ClpS [Yersinia pseudotuberculosis IP 31758] gi|162351046|gb|ABX84994.1| ATP-dependent Clp protease adaptor protein ClpS [Yersinia pestis Angola] gi|165913120|gb|EDR31744.1| ATP-dependent Clp protease adaptor protein ClpS [Yersinia pestis biovar Orientalis str. IP275] gi|165923372|gb|EDR40504.1| ATP-dependent Clp protease adaptor protein ClpS [Yersinia pestis biovar Orientalis str. F1991016] gi|165991205|gb|EDR43506.1| ATP-dependent Clp protease adaptor protein ClpS [Yersinia pestis biovar Antiqua str. E1979001] gi|166207166|gb|EDR51646.1| ATP-dependent Clp protease adaptor protein ClpS [Yersinia pestis biovar Antiqua str. B42003004] gi|166962549|gb|EDR58570.1| ATP-dependent Clp protease adaptor protein ClpS [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167050537|gb|EDR61945.1| ATP-dependent Clp protease adaptor protein ClpS [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167056919|gb|EDR66682.1| ATP-dependent Clp protease adaptor protein ClpS [Yersinia pestis biovar Mediaevalis str. K1973002] gi|169751452|gb|ACA68970.1| ATP-dependent Clp protease adaptor protein ClpS [Yersinia pseudotuberculosis YPIII] gi|186697836|gb|ACC88465.1| ATP-dependent Clp protease adaptor protein ClpS [Yersinia pseudotuberculosis PB1/+] gi|229678957|gb|EEO75060.1| regulatory protein for ClpA substrate specificity [Yersinia pestis Nepal516] gi|229689785|gb|EEO81846.1| regulatory protein for ClpA substrate specificity [Yersinia pestis biovar Orientalis str. India 195] gi|229697700|gb|EEO87747.1| regulatory protein for ClpA substrate specificity [Yersinia pestis biovar Orientalis str. PEXU2] gi|229700734|gb|EEO88763.1| regulatory protein for ClpA substrate specificity [Yersinia pestis Pestoides A] gi|262361398|gb|ACY58119.1| ATP-dependent Clp protease adaptor protein ClpS [Yersinia pestis D106004] gi|262365065|gb|ACY61622.1| ATP-dependent Clp protease adaptor protein ClpS [Yersinia pestis D182038] gi|270335484|gb|EFA46261.1| ATP-dependent Clp protease adaptor protein ClpS [Yersinia pestis KIM D27] gi|294353817|gb|ADE64158.1| ATP-dependent Clp protease adaptor protein ClpS [Yersinia pestis Z176003] gi|320015777|gb|ADV99348.1| regulatory protein for ClpA substrate specificity [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 106 Score = 158 bits (399), Expect = 3e-37, Method: Composition-based stats. Identities = 44/105 (41%), Positives = 65/105 (61%), Gaps = 2/105 (1%) Query: 33 NKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKC 92 F++ + + ++ P +Y+V+L ND+YTPMEFVI VLQ FF D E A Sbjct: 3 KNNDWLNFEHLVKD--KQIEALQPPSMYKVILNNDDYTPMEFVIDVLQKFFSYDIERATQ 60 Query: 93 IMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +ML VH+QG CGV+ E+AE KV V Y+R++++PL C +E+ Sbjct: 61 LMLNVHYQGKAICGVFTAEVAETKVAHVNQYARENEHPLLCTLEK 105 >gi|26990714|ref|NP_746139.1| ATP-dependent Clp protease adaptor protein ClpS [Pseudomonas putida KT2440] gi|148547059|ref|YP_001267161.1| ATP-dependent Clp protease adaptor protein ClpS [Pseudomonas putida F1] gi|167034610|ref|YP_001669841.1| ATP-dependent Clp protease adaptor protein ClpS [Pseudomonas putida GB-1] gi|37077092|sp|Q88FS4|CLPS_PSEPK RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|166214740|sp|A5W1G7|CLPS_PSEP1 RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|189082475|sp|B0KLX7|CLPS_PSEPG RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|24985707|gb|AAN69603.1|AE016593_11 conserved hypothetical protein [Pseudomonas putida KT2440] gi|148511117|gb|ABQ77977.1| ATP-dependent Clp protease adaptor protein ClpS [Pseudomonas putida F1] gi|166861098|gb|ABY99505.1| ATP-dependent Clp protease adaptor protein ClpS [Pseudomonas putida GB-1] Length = 120 Score = 158 bits (399), Expect = 3e-37, Method: Composition-based stats. Identities = 41/106 (38%), Positives = 63/106 (59%) Query: 32 MNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAK 91 ++ E D + ++ P +Y+V+L ND+YTPM+FV+ VL+ FF + E A Sbjct: 13 QDRPQSNEDDGSGLAVQEAKPILQAPPMYKVVLFNDDYTPMDFVVEVLETFFSLNRELAT 72 Query: 92 CIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 IML VH +G CG++ +IAE K QV Y+R+ Q+PL C +E+ Sbjct: 73 KIMLTVHTEGRAVCGLFTRDIAETKAMQVNQYARESQHPLLCEIEK 118 >gi|322832165|ref|YP_004212192.1| ATP-dependent Clp protease adaptor protein ClpS [Rahnella sp. Y9602] gi|321167366|gb|ADW73065.1| ATP-dependent Clp protease adaptor protein ClpS [Rahnella sp. Y9602] Length = 106 Score = 158 bits (399), Expect = 3e-37, Method: Composition-based stats. Identities = 45/105 (42%), Positives = 68/105 (64%), Gaps = 2/105 (1%) Query: 33 NKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKC 92 N + F++ + +V+ P +Y+V+L ND+YTPMEFVI VLQ FF D E A Sbjct: 3 NNQDWLNFEHLAAD--KQKDEVKPPSMYKVILNNDDYTPMEFVIDVLQKFFSYDIERATQ 60 Query: 93 IMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +ML+VH++G CGVY E+AE KV V Y++++++PL C +E+ Sbjct: 61 LMLQVHYRGKAICGVYTAEVAETKVAHVNEYAKENEHPLLCTLEK 105 >gi|283784648|ref|YP_003364513.1| ATP-dependent Clp protease adaptor protein [Citrobacter rodentium ICC168] gi|282948102|emb|CBG87667.1| ATP-dependent Clp protease adaptor protein [Citrobacter rodentium ICC168] Length = 106 Score = 158 bits (399), Expect = 3e-37, Method: Composition-based stats. Identities = 47/105 (44%), Positives = 68/105 (64%), Gaps = 2/105 (1%) Query: 33 NKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKC 92 +FD +VR + ++ P +Y+V+LVND+YTPMEFVI VLQ FF D E A Sbjct: 3 KTNDWLDFDQLAADKVRDA--LKPPSMYKVILVNDDYTPMEFVIDVLQKFFSYDVERATQ 60 Query: 93 IMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +ML VH+QG CG++ E+AE KV V Y+R++++PL C +E+ Sbjct: 61 LMLAVHYQGKAICGIFTAEVAETKVAMVNKYARENEHPLLCTLEK 105 >gi|300310730|ref|YP_003774822.1| ATP-dependent Clp protease adaptor protein [Herbaspirillum seropedicae SmR1] gi|300073515|gb|ADJ62914.1| ATP-dependent Clp protease adaptor protein [Herbaspirillum seropedicae SmR1] Length = 104 Score = 158 bits (399), Expect = 3e-37, Method: Composition-based stats. Identities = 53/111 (47%), Positives = 70/111 (63%), Gaps = 8/111 (7%) Query: 27 MADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKD 86 MA N G R SK++ P +Y+VLL+ND+YTPMEFV+ V+Q +F KD Sbjct: 1 MATKHENDGGT--------VLERQESKLKPPPMYQVLLLNDDYTPMEFVVAVIQQYFNKD 52 Query: 87 HETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 ETA IMLKVH G G CGVY +IA KV V+ ++R+ +PLQC+ME+ Sbjct: 53 RETATQIMLKVHRDGKGMCGVYPKDIASTKVELVLTHARKAGHPLQCVMEE 103 >gi|126641956|ref|YP_001084940.1| ATP-dependent Clp protease adaptor protein ClpS [Acinetobacter baumannii ATCC 17978] gi|169633633|ref|YP_001707369.1| ATP-dependent Clp protease adaptor protein ClpS [Acinetobacter baumannii SDF] gi|169795754|ref|YP_001713547.1| ATP-dependent Clp protease adaptor protein ClpS [Acinetobacter baumannii AYE] gi|213157554|ref|YP_002319599.1| ATP-dependent Clp protease adaptor protein [Acinetobacter baumannii AB0057] gi|215483239|ref|YP_002325446.1| ATP-dependent Clp protease adaptor protein ClpS family protein [Acinetobacter baumannii AB307-0294] gi|239503974|ref|ZP_04663284.1| ATP-dependent Clp protease adaptor protein ClpS [Acinetobacter baumannii AB900] gi|260554817|ref|ZP_05827038.1| substrate modulator for ClpAP [Acinetobacter baumannii ATCC 19606] gi|294837620|ref|ZP_06782303.1| ATP-dependent Clp protease adaptor protein ClpS [Acinetobacter sp. 6013113] gi|294840916|ref|ZP_06785599.1| ATP-dependent Clp protease adaptor protein ClpS [Acinetobacter sp. 6014059] gi|294856990|ref|ZP_06794759.1| ATP-dependent Clp protease adaptor protein ClpS [Acinetobacter sp. 6013150] gi|301344683|ref|ZP_07225424.1| ATP-dependent Clp protease adaptor protein ClpS [Acinetobacter baumannii AB056] gi|301511220|ref|ZP_07236457.1| ATP-dependent Clp protease adaptor protein ClpS [Acinetobacter baumannii AB058] gi|301595568|ref|ZP_07240576.1| ATP-dependent Clp protease adaptor protein ClpS [Acinetobacter baumannii AB059] gi|126387840|gb|ABO12338.1| putative protease [Acinetobacter baumannii ATCC 17978] gi|169148681|emb|CAM86547.1| substrate modulator for ClpAP, directs protease activity towards aggregated proteins [Acinetobacter baumannii AYE] gi|169152425|emb|CAP01380.1| substrate modulator for ClpAP, directs protease activity towards aggregated proteins [Acinetobacter baumannii] gi|213056714|gb|ACJ41616.1| ATP-dependent Clp protease adaptor protein [Acinetobacter baumannii AB0057] gi|213988872|gb|ACJ59171.1| ATP-dependent Clp protease adaptor protein ClpS family protein [Acinetobacter baumannii AB307-0294] gi|260411359|gb|EEX04656.1| substrate modulator for ClpAP [Acinetobacter baumannii ATCC 19606] gi|322508668|gb|ADX04122.1| clpS [Acinetobacter baumannii 1656-2] gi|323518276|gb|ADX92657.1| ATP-dependent Clp protease adaptor protein ClpS [Acinetobacter baumannii TCDC-AB0715] Length = 137 Score = 158 bits (399), Expect = 3e-37, Method: Composition-based stats. Identities = 48/124 (38%), Positives = 68/124 (54%), Gaps = 3/124 (2%) Query: 18 ILALMSFIFMADSRMNKKGIAEFDNCLDSEVRFS---SKVRVPKLYRVLLVNDNYTPMEF 74 I A D N + + D EV +++ P LY V+L+ND+YTPM+F Sbjct: 13 IKASFQQSGYVDWHFNPRLSDSQNEDHDGEVVVQTAPPELKRPPLYAVVLLNDDYTPMDF 72 Query: 75 VIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCI 134 VI +LQ +F + + A +ML VH++G G GVY +IAE K N V NY+R +PL C Sbjct: 73 VIEILQQYFAMNLDQATQVMLTVHYEGKGTAGVYPRDIAETKANLVNNYARSQGHPLLCQ 132 Query: 135 MEQK 138 +E K Sbjct: 133 IEPK 136 >gi|17547184|ref|NP_520586.1| ATP-dependent Clp protease adaptor protein ClpS [Ralstonia solanacearum GMI1000] gi|21542317|sp|Q8XWK9|CLPS_RALSO RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|17429486|emb|CAD16172.1| hypothetical atp-dependent clp protease adaptor protein clps [Ralstonia solanacearum GMI1000] gi|299065938|emb|CBJ37119.1| ATP-dependent Clp protease adapter protein clpS [Ralstonia solanacearum CMR15] Length = 108 Score = 158 bits (399), Expect = 3e-37, Method: Composition-based stats. Identities = 46/104 (44%), Positives = 66/104 (63%) Query: 34 KKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCI 93 ++ + R ++ P +Y+VLL+ND+YTPMEFV+ +LQ +F KD ETA I Sbjct: 4 RQATTPQHDAGTVLERKEQALKPPAMYKVLLLNDDYTPMEFVVMILQQYFSKDRETATQI 63 Query: 94 MLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 ML VH +G G CG+Y +IA KV V ++RQ +PLQC+ME+ Sbjct: 64 MLTVHREGRGVCGIYTRDIAATKVELVSTHARQAGHPLQCVMEE 107 >gi|83746257|ref|ZP_00943310.1| ATP-dependent Clp protease adaptor protein ClpS [Ralstonia solanacearum UW551] gi|207723598|ref|YP_002253997.1| atp-dependent clp protease adaptor protein clps [Ralstonia solanacearum MolK2] gi|207742558|ref|YP_002258950.1| atp-dependent clp protease adaptor protein clps [Ralstonia solanacearum IPO1609] gi|300690670|ref|YP_003751665.1| ATP-dependent Clp protease adapter protein clpS [Ralstonia solanacearum PSI07] gi|300703254|ref|YP_003744856.1| ATP-dependent clp protease adapter protein clps [Ralstonia solanacearum CFBP2957] gi|83727007|gb|EAP74132.1| ATP-dependent Clp protease adaptor protein ClpS [Ralstonia solanacearum UW551] gi|206588800|emb|CAQ35763.1| atp-dependent clp protease adaptor protein clps [Ralstonia solanacearum MolK2] gi|206593951|emb|CAQ60878.1| atp-dependent clp protease adaptor protein clps [Ralstonia solanacearum IPO1609] gi|299070917|emb|CBJ42221.1| ATP-dependent Clp protease adapter protein clpS [Ralstonia solanacearum CFBP2957] gi|299077730|emb|CBJ50368.1| ATP-dependent Clp protease adapter protein clpS [Ralstonia solanacearum PSI07] Length = 108 Score = 158 bits (399), Expect = 3e-37, Method: Composition-based stats. Identities = 46/104 (44%), Positives = 66/104 (63%) Query: 34 KKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCI 93 ++ + R ++ P +Y+VLL+ND+YTPMEFV+ +LQ +F KD ETA I Sbjct: 4 RQATTPQHDAGTVLERKEQALKPPAMYKVLLLNDDYTPMEFVVMILQQYFSKDRETATQI 63 Query: 94 MLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 ML VH +G G CG+Y +IA KV V ++RQ +PLQC+ME+ Sbjct: 64 MLTVHREGKGVCGIYTRDIAATKVELVSTHARQAGHPLQCVMEE 107 >gi|238749793|ref|ZP_04611298.1| ATP-dependent Clp protease adapter protein clpS [Yersinia rohdei ATCC 43380] gi|238712448|gb|EEQ04661.1| ATP-dependent Clp protease adapter protein clpS [Yersinia rohdei ATCC 43380] Length = 106 Score = 157 bits (398), Expect = 4e-37, Method: Composition-based stats. Identities = 44/105 (41%), Positives = 65/105 (61%), Gaps = 2/105 (1%) Query: 33 NKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKC 92 F++ + + ++ P +Y+V+L ND+YTPMEFVI VLQ FF D E A Sbjct: 3 KNNDWLNFEHLVKD--KHIEALKPPSMYKVILNNDDYTPMEFVIDVLQKFFSYDIERATQ 60 Query: 93 IMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +ML VH+QG CGV+ E+AE KV V Y+R++++PL C +E+ Sbjct: 61 LMLNVHYQGKAICGVFTAEVAETKVAHVNQYARENEHPLLCTLEK 105 >gi|310767160|gb|ADP12110.1| ATP-dependent Clp protease adaptor protein ClpS [Erwinia sp. Ejp617] Length = 106 Score = 157 bits (398), Expect = 4e-37, Method: Composition-based stats. Identities = 46/105 (43%), Positives = 66/105 (62%), Gaps = 2/105 (1%) Query: 33 NKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKC 92 F+ D +VR + ++ P +Y+V+L ND++TPMEFVI VLQ FF D E A Sbjct: 3 KTNDWLNFEQLADDKVREA--LKPPSMYKVILNNDDFTPMEFVIDVLQKFFSYDIERATQ 60 Query: 93 IMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +ML VH+QG CGV+ E+AE KV V Y+R +++PL C +E+ Sbjct: 61 LMLTVHYQGKAICGVFTAEVAETKVAHVNKYARDNEHPLLCTLEK 105 >gi|320354854|ref|YP_004196193.1| ATP-dependent Clp protease adaptor protein ClpS [Desulfobulbus propionicus DSM 2032] gi|320123356|gb|ADW18902.1| ATP-dependent Clp protease adaptor protein ClpS [Desulfobulbus propionicus DSM 2032] Length = 105 Score = 157 bits (398), Expect = 4e-37, Method: Composition-based stats. Identities = 42/93 (45%), Positives = 63/93 (67%) Query: 45 DSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGE 104 + R +++ P LY+VLL ND+YT M+FV+ +LQ F+K+ + A IML VHHQG+G Sbjct: 11 KIQTRDKEQLQEPPLYKVLLHNDDYTTMDFVVMILQTVFHKNTDEATRIMLNVHHQGVGI 70 Query: 105 CGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 GVY EI E KV V ++++Q+PL+C +E+ Sbjct: 71 AGVYTREIGETKVAIVHRLAKRNQFPLRCSLEK 103 >gi|325273424|ref|ZP_08139676.1| ATP-dependent Clp protease adaptor protein ClpS [Pseudomonas sp. TJI-51] gi|324101437|gb|EGB99031.1| ATP-dependent Clp protease adaptor protein ClpS [Pseudomonas sp. TJI-51] Length = 120 Score = 157 bits (398), Expect = 4e-37, Method: Composition-based stats. Identities = 41/106 (38%), Positives = 63/106 (59%) Query: 32 MNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAK 91 ++ E D + ++ P +Y+V+L ND+YTPM+FV+ VL+ FF + E A Sbjct: 13 QDRPQSNEDDGSGLAVQEAKPILQAPPMYKVVLFNDDYTPMDFVVEVLETFFSLNRELAT 72 Query: 92 CIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 IML VH +G CG++ +IAE K QV Y+R+ Q+PL C +E+ Sbjct: 73 KIMLTVHTEGRAVCGLFTRDIAETKAMQVNQYARESQHPLLCEIEK 118 >gi|292492310|ref|YP_003527749.1| ATP-dependent Clp protease adaptor protein ClpS [Nitrosococcus halophilus Nc4] gi|291580905|gb|ADE15362.1| ATP-dependent Clp protease adaptor protein ClpS [Nitrosococcus halophilus Nc4] Length = 107 Score = 157 bits (398), Expect = 4e-37, Method: Composition-based stats. Identities = 50/106 (47%), Positives = 69/106 (65%) Query: 32 MNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAK 91 M K E + + K++ P +Y+V+++ND+YTPMEFV+ VLQ FF D E A Sbjct: 1 MGKIDPDEENEGGFAVDTAKPKLKRPPMYKVVMLNDDYTPMEFVVEVLQTFFAMDREKAT 60 Query: 92 CIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 IM +VH +G G CGV+ YEIAE KV QV YS HQ+PL+C++E+ Sbjct: 61 RIMWQVHTEGKGICGVFTYEIAETKVAQVNEYSLNHQHPLKCVLEK 106 >gi|170722578|ref|YP_001750266.1| ATP-dependent Clp protease adaptor protein ClpS [Pseudomonas putida W619] gi|229889823|sp|B1JBE9|CLPS_PSEPW RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|169760581|gb|ACA73897.1| ATP-dependent Clp protease adaptor protein ClpS [Pseudomonas putida W619] Length = 120 Score = 157 bits (398), Expect = 4e-37, Method: Composition-based stats. Identities = 41/106 (38%), Positives = 63/106 (59%) Query: 32 MNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAK 91 ++ E D + ++ P +Y+V+L ND+YTPM+FV+ VL+ FF + E A Sbjct: 13 QDRPQSNEDDGSGLAVQEAKPILQAPPMYKVVLFNDDYTPMDFVVEVLETFFSLNRELAT 72 Query: 92 CIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 IML VH +G CG++ +IAE K QV Y+R+ Q+PL C +E+ Sbjct: 73 KIMLTVHTEGRAVCGLFTRDIAETKAMQVNQYARESQHPLLCEIEK 118 >gi|200390037|ref|ZP_03216648.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|199602482|gb|EDZ01028.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Virchow str. SL491] Length = 106 Score = 157 bits (398), Expect = 4e-37, Method: Composition-based stats. Identities = 47/105 (44%), Positives = 67/105 (63%), Gaps = 2/105 (1%) Query: 33 NKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKC 92 +FD ++ V ++ P +Y+V+LVND+YTPMEFVI VLQ FF D E A Sbjct: 3 KTNDWLDFDQLVEDSV--CDALKPPSMYKVILVNDDYTPMEFVIDVLQKFFSYDVERATQ 60 Query: 93 IMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +ML VH+QG CGV+ E+AE KV V Y+R++++PL C +E+ Sbjct: 61 LMLAVHYQGKAICGVFTAEVAETKVAMVNKYARENEHPLLCTLEK 105 >gi|259908937|ref|YP_002649293.1| ATP-dependent Clp protease adaptor protein ClpS [Erwinia pyrifoliae Ep1/96] gi|224964559|emb|CAX56072.1| ATP-dependent Clp protease adaptor protein [Erwinia pyrifoliae Ep1/96] gi|283478941|emb|CAY74857.1| ATP-dependent Clp protease adaptor protein ClpS [Erwinia pyrifoliae DSM 12163] Length = 106 Score = 157 bits (398), Expect = 4e-37, Method: Composition-based stats. Identities = 45/105 (42%), Positives = 66/105 (62%), Gaps = 2/105 (1%) Query: 33 NKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKC 92 F+ + +VR + ++ P +Y+V+L ND++TPMEFVI VLQ FF D E A Sbjct: 3 KTNDWLNFEQLANDKVREA--LKPPSMYKVILNNDDFTPMEFVIDVLQKFFSYDIERATQ 60 Query: 93 IMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +ML VH+QG CGV+ E+AE KV V Y+R +++PL C +E+ Sbjct: 61 LMLTVHYQGKAVCGVFTAEVAETKVAHVNKYARDNEHPLLCTLEK 105 >gi|254475794|ref|ZP_05089180.1| ATP-dependent Clp protease adaptor protein ClpS [Ruegeria sp. R11] gi|214030037|gb|EEB70872.1| ATP-dependent Clp protease adaptor protein ClpS [Ruegeria sp. R11] Length = 107 Score = 157 bits (398), Expect = 5e-37, Method: Composition-based stats. Identities = 46/101 (45%), Positives = 68/101 (67%) Query: 38 AEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKV 97 ++ D + K + P Y+VLL+ND+YTPMEFV+ VL+ FF H A +ML V Sbjct: 6 SDDDTEFGVLTKTRPKTQRPPRYKVLLLNDDYTPMEFVVMVLERFFNMTHAEAFEVMLTV 65 Query: 98 HHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 H +G+ GV+++EIAE KV QVM+++ +HQ+PLQC ME++ Sbjct: 66 HKKGVAVVGVFSHEIAETKVGQVMDFAHRHQHPLQCTMEKE 106 >gi|154253238|ref|YP_001414062.1| ATP-dependent Clp protease adaptor protein ClpS [Parvibaculum lavamentivorans DS-1] gi|171769648|sp|A7HWX2|CLPS_PARL1 RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|154157188|gb|ABS64405.1| ATP-dependent Clp protease adaptor protein ClpS [Parvibaculum lavamentivorans DS-1] Length = 110 Score = 157 bits (398), Expect = 5e-37, Method: Composition-based stats. Identities = 55/112 (49%), Positives = 77/112 (68%), Gaps = 2/112 (1%) Query: 27 MADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKD 86 M+D R ++G + + K + P LY+VLL+ND+YTPMEFV+HVL+ FF K Sbjct: 1 MSDDR--RRGDEDGGAGTGVITKTKPKTKKPSLYKVLLLNDDYTPMEFVVHVLERFFNKG 58 Query: 87 HETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 + A IML VH G+G CG+Y YE+AE KV QVM++++QHQ+PLQC ME++ Sbjct: 59 RDEATVIMLHVHQHGVGICGLYTYEVAETKVTQVMDFAQQHQHPLQCTMERE 110 >gi|237707137|ref|ZP_04537618.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia sp. 3_2_53FAA] gi|226898347|gb|EEH84606.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia sp. 3_2_53FAA] Length = 106 Score = 157 bits (397), Expect = 5e-37, Method: Composition-based stats. Identities = 48/105 (45%), Positives = 68/105 (64%), Gaps = 2/105 (1%) Query: 33 NKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKC 92 +FD + +VR ++ P +Y+V+LVND+YTPMEFVI VLQ FF D E A Sbjct: 3 KMNDWLDFDQLAEEKVR--DALKPPSMYKVILVNDDYTPMEFVIDVLQKFFSYDVERATQ 60 Query: 93 IMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +ML VH+QG CGV+ E+AE KV V Y+R++++PL C +E+ Sbjct: 61 LMLAVHYQGKAICGVFTAEVAETKVAMVNKYARENEHPLLCTLEK 105 >gi|294676717|ref|YP_003577332.1| ATP-dependent Clp protease adaptor protein ClpS [Rhodobacter capsulatus SB 1003] gi|294475537|gb|ADE84925.1| ATP-dependent Clp protease adaptor protein ClpS [Rhodobacter capsulatus SB 1003] Length = 117 Score = 157 bits (397), Expect = 5e-37, Method: Composition-based stats. Identities = 47/91 (51%), Positives = 70/91 (76%) Query: 48 VRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGV 107 V+ + + P +Y+V+L+ND+YTPMEFV+H+L+ FF H A IML VH +G+ GV Sbjct: 27 VKTAPRTARPPMYKVMLLNDDYTPMEFVVHILERFFGMTHAQAFEIMLTVHKKGLAVVGV 86 Query: 108 YAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 Y++E+AE KV+QVM++SR+HQ+PLQC ME++ Sbjct: 87 YSFEVAETKVSQVMDFSRRHQHPLQCTMEKE 117 >gi|261339214|ref|ZP_05967072.1| hypothetical protein ENTCAN_05442 [Enterobacter cancerogenus ATCC 35316] gi|296103112|ref|YP_003613258.1| ATP-dependent Clp protease adaptor protein ClpS [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|288319063|gb|EFC58001.1| ATP-dependent Clp protease adaptor protein ClpS [Enterobacter cancerogenus ATCC 35316] gi|295057571|gb|ADF62309.1| ATP-dependent Clp protease adaptor protein ClpS [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295096412|emb|CBK85502.1| Uncharacterized conserved protein [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 106 Score = 157 bits (397), Expect = 5e-37, Method: Composition-based stats. Identities = 45/105 (42%), Positives = 69/105 (65%), Gaps = 2/105 (1%) Query: 33 NKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKC 92 +FD + +VR ++ P +Y+V+L+ND+YTPMEFVI VLQ FF D E A Sbjct: 3 KTNDWLDFDQLAEDKVR--DALKPPSMYKVMLMNDDYTPMEFVIDVLQKFFSYDVERATQ 60 Query: 93 IMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +ML VH++G CG++ E+AE KV V +Y+R++++PL C +E+ Sbjct: 61 LMLTVHYRGKAICGIFTAEVAETKVAMVNDYARENEHPLLCTLEK 105 >gi|146311056|ref|YP_001176130.1| ATP-dependent Clp protease adaptor protein ClpS [Enterobacter sp. 638] gi|167008655|sp|A4W8P9|CLPS_ENT38 RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|145317932|gb|ABP60079.1| ATP-dependent Clp protease adaptor protein ClpS [Enterobacter sp. 638] Length = 106 Score = 157 bits (397), Expect = 5e-37, Method: Composition-based stats. Identities = 46/107 (42%), Positives = 69/107 (64%), Gaps = 2/107 (1%) Query: 31 RMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETA 90 K +FD + +VR ++ P +Y+V+L+ND+YTPMEFVI VLQ FF D E A Sbjct: 1 MSKKNDWLDFDQLAEDKVR--DALKPPSMYKVMLMNDDYTPMEFVIDVLQKFFSYDVERA 58 Query: 91 KCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +ML VH++G CG++ E+AE KV V Y+R++++PL C +E+ Sbjct: 59 TQLMLTVHYRGKAICGIFTAEVAETKVAMVNEYARENEHPLLCTLEK 105 >gi|209517459|ref|ZP_03266300.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia sp. H160] gi|295677449|ref|YP_003605973.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia sp. CCGE1002] gi|209502113|gb|EEA02128.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia sp. H160] gi|295437292|gb|ADG16462.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia sp. CCGE1002] Length = 104 Score = 157 bits (397), Expect = 5e-37, Method: Composition-based stats. Identities = 46/90 (51%), Positives = 67/90 (74%) Query: 48 VRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGV 107 R K++ P +Y+V+L+ND++TPMEFV+ ++Q +F KD ETA +MLKVH +G G CGV Sbjct: 14 ERQEQKLKPPSMYKVVLLNDDFTPMEFVVMIVQEYFNKDRETATQVMLKVHREGRGVCGV 73 Query: 108 YAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 Y +IA KV QV+ ++RQ +PLQC+ME+ Sbjct: 74 YTRDIASTKVEQVVTHARQAGHPLQCVMEE 103 >gi|152983115|ref|YP_001354205.1| ATP-dependent Clp protease adaptor protein ClpS [Janthinobacterium sp. Marseille] gi|254763819|sp|A6T108|CLPS_JANMA RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|151283192|gb|ABR91602.1| ATP-dependent Clp protease adaptor protein ClpS [Janthinobacterium sp. Marseille] Length = 102 Score = 157 bits (397), Expect = 6e-37, Method: Composition-based stats. Identities = 48/89 (53%), Positives = 65/89 (73%) Query: 49 RFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVY 108 R K++ P +Y+VLL+ND+YTPMEFV+ +LQ +F KD ETA IML VH G G CGVY Sbjct: 13 RQEQKLKPPSMYQVLLLNDDYTPMEFVVLILQEYFSKDRETATQIMLMVHRDGKGICGVY 72 Query: 109 AYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +IA KV V+N++R+ +PLQC+ME+ Sbjct: 73 PKDIASTKVELVLNHARKAGHPLQCVMEE 101 >gi|319944074|ref|ZP_08018353.1| ATP-dependent Clp protease [Lautropia mirabilis ATCC 51599] gi|319742651|gb|EFV95059.1| ATP-dependent Clp protease [Lautropia mirabilis ATCC 51599] Length = 102 Score = 157 bits (397), Expect = 6e-37, Method: Composition-based stats. Identities = 46/90 (51%), Positives = 65/90 (72%) Query: 48 VRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGV 107 R ++ P LY+VLL+ND++TPM+FV+ VLQ FF E A +ML+VHH+G G CG+ Sbjct: 12 EREQLALKPPPLYKVLLLNDDFTPMDFVVQVLQKFFSMSLEKATDVMLQVHHEGRGVCGM 71 Query: 108 YAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 + +IA KV QV ++RQHQ+PLQC+ME+ Sbjct: 72 FPRDIALTKVEQVSGFARQHQHPLQCVMEE 101 >gi|330719866|gb|EGG98352.1| ATP-dependent Clp protease adaptor protein ClpS [gamma proteobacterium IMCC2047] Length = 131 Score = 157 bits (397), Expect = 6e-37, Method: Composition-based stats. Identities = 42/100 (42%), Positives = 65/100 (65%) Query: 38 AEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKV 97 + D+ + + K++ P +Y+V++ ND+YTPM+FV+ +L++FF + E A IML V Sbjct: 30 HQGDDGNLAVEQAKPKLKPPPMYKVVMYNDDYTPMDFVVEILESFFNLNREKATQIMLTV 89 Query: 98 HHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 H QG CGV+ +IAE KV QV YS +++PL C M+Q Sbjct: 90 HTQGKAVCGVFTRDIAETKVTQVNQYSSDNEHPLLCGMDQ 129 >gi|330810450|ref|YP_004354912.1| ATP-dependent Clp protease adapter protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327378558|gb|AEA69908.1| ATP-dependent Clp protease adapter protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 120 Score = 157 bits (397), Expect = 6e-37, Method: Composition-based stats. Identities = 40/106 (37%), Positives = 65/106 (61%) Query: 32 MNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAK 91 ++ + + D+ + ++ P +Y+V+L ND+YTPM+FV+ VL+ FF + E A Sbjct: 13 QDRPDLHDDDSAGIAVQEAKPALQAPPMYKVVLFNDDYTPMDFVVEVLEVFFNLNRELAT 72 Query: 92 CIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +ML VH +G CGV+ +IAE K QV Y+R+ Q+PL C +E+ Sbjct: 73 KVMLAVHTEGRAVCGVFTRDIAETKAMQVNQYARESQHPLLCEIEK 118 >gi|109898690|ref|YP_661945.1| ATP-dependent Clp protease adaptor protein ClpS [Pseudoalteromonas atlantica T6c] gi|123064521|sp|Q15T97|CLPS_PSEA6 RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|109700971|gb|ABG40891.1| ATP-dependent Clp protease adaptor protein ClpS [Pseudoalteromonas atlantica T6c] gi|332173682|gb|AEE22936.1| ATP-dependent Clp protease adaptor protein ClpS [Glaciecola agarilytica 4H-3-7+YE-5] Length = 106 Score = 157 bits (397), Expect = 6e-37, Method: Composition-based stats. Identities = 51/106 (48%), Positives = 65/106 (61%), Gaps = 1/106 (0%) Query: 32 MNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAK 91 M+K + + K+ P +Y+VLL ND+YTPM+FVI VL FF D E A Sbjct: 1 MSKDNTINIEREKQLDT-VKQKLAPPPMYKVLLNNDDYTPMDFVIEVLVRFFNLDSEKAH 59 Query: 92 CIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 IML VH++G CGVY EIAE KV QV Y+++HQ+PL C MEQ Sbjct: 60 QIMLTVHYRGRAVCGVYTAEIAETKVMQVTQYAKKHQHPLMCTMEQ 105 >gi|212709755|ref|ZP_03317883.1| hypothetical protein PROVALCAL_00803 [Providencia alcalifaciens DSM 30120] gi|212687566|gb|EEB47094.1| hypothetical protein PROVALCAL_00803 [Providencia alcalifaciens DSM 30120] Length = 106 Score = 156 bits (396), Expect = 6e-37, Method: Composition-based stats. Identities = 50/102 (49%), Positives = 65/102 (63%), Gaps = 2/102 (1%) Query: 36 GIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIML 95 G + D EV ++ P +Y+VLL ND+YTPM+FV+ VLQ +F D E A IML Sbjct: 6 GTFKTDTIFKDEV--EKALQPPSMYKVLLNNDDYTPMDFVVEVLQKYFSFDEERATQIML 63 Query: 96 KVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 VH QG G CGVY EIAE K QV ++R+H+YPL C +E+ Sbjct: 64 DVHFQGKGVCGVYTAEIAETKAAQVNAFAREHEYPLLCTIEK 105 >gi|292487808|ref|YP_003530683.1| ATP-dependent Clp protease adaptor protein ClpS [Erwinia amylovora CFBP1430] gi|292899037|ref|YP_003538406.1| ATP-dependent Clp protease adaptor protein [Erwinia amylovora ATCC 49946] gi|291198885|emb|CBJ45995.1| ATP-dependent Clp protease adaptor protein [Erwinia amylovora ATCC 49946] gi|291553230|emb|CBA20275.1| ATP-dependent Clp protease adaptor protein ClpS [Erwinia amylovora CFBP1430] gi|312171926|emb|CBX80183.1| ATP-dependent Clp protease adaptor protein ClpS [Erwinia amylovora ATCC BAA-2158] Length = 106 Score = 156 bits (396), Expect = 6e-37, Method: Composition-based stats. Identities = 46/105 (43%), Positives = 66/105 (62%), Gaps = 2/105 (1%) Query: 33 NKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKC 92 F+ + +VR +++ P +Y+VLL ND++TPMEFVI VLQ FF D E A Sbjct: 3 KTNDWLNFEQLAEDKVR--EELKPPSMYKVLLNNDDFTPMEFVIDVLQKFFSYDIERATQ 60 Query: 93 IMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +ML VH+QG CGV+ E+AE KV V Y+R +++PL C +E+ Sbjct: 61 LMLTVHYQGKAICGVFTAEVAETKVAHVNKYARDNEHPLLCTLEK 105 >gi|167835724|ref|ZP_02462607.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia thailandensis MSMB43] Length = 104 Score = 156 bits (396), Expect = 6e-37, Method: Composition-based stats. Identities = 47/90 (52%), Positives = 67/90 (74%) Query: 48 VRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGV 107 R K++ P +Y+V+L+ND++TPMEFV+ ++Q +F KD ETA IMLKVH +G G CGV Sbjct: 14 ERKEQKLKPPSMYKVVLLNDDFTPMEFVVMIVQEYFRKDRETATQIMLKVHREGRGVCGV 73 Query: 108 YAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 Y +IA KV QV+ ++RQ +PLQC+ME+ Sbjct: 74 YTRDIASTKVEQVVTHARQAGHPLQCVMEE 103 >gi|330875785|gb|EGH09934.1| ATP-dependent Clp protease adaptor protein ClpS [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 120 Score = 156 bits (396), Expect = 6e-37, Method: Composition-based stats. Identities = 40/106 (37%), Positives = 63/106 (59%) Query: 32 MNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAK 91 + E D+ + ++ P +Y+V+L ND+YTPM+FV+ VL+ FF + E A Sbjct: 13 QDGPQSHEDDSAGIAVQDAKPTLQAPPMYKVVLFNDDYTPMDFVVEVLEAFFNLNRELAT 72 Query: 92 CIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +ML VH +G CG++ +IAE K QV Y+R+ Q+PL C +E+ Sbjct: 73 KVMLAVHTEGRAVCGLFTRDIAETKAAQVNQYARESQHPLLCEIEK 118 >gi|327480905|gb|AEA84215.1| ATP-dependent Clp protease adaptor protein ClpS [Pseudomonas stutzeri DSM 4166] Length = 122 Score = 156 bits (396), Expect = 7e-37, Method: Composition-based stats. Identities = 39/106 (36%), Positives = 61/106 (57%) Query: 32 MNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAK 91 ++ D + +++ P +Y+V++ ND+YTPM+FV+ VL+ F E A Sbjct: 15 QDRPLEDGDDASGLAVEEAKPQLKAPPMYKVVMFNDDYTPMDFVVEVLEGIFNHSREQAT 74 Query: 92 CIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 IML VH +G CGVY ++AE K QV Y+R+ Q+PL C +E+ Sbjct: 75 KIMLAVHTEGQAVCGVYTRDVAETKAMQVNQYARECQHPLLCEIEK 120 >gi|253997306|ref|YP_003049370.1| ATP-dependent Clp protease adaptor protein ClpS [Methylotenera mobilis JLW8] gi|253983985|gb|ACT48843.1| ATP-dependent Clp protease adaptor protein ClpS [Methylotenera mobilis JLW8] Length = 103 Score = 156 bits (396), Expect = 7e-37, Method: Composition-based stats. Identities = 54/102 (52%), Positives = 73/102 (71%), Gaps = 3/102 (2%) Query: 35 KGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIM 94 E D L EV +K ++P +++VLL+ND+YTPMEFVI V++ FF K E A IM Sbjct: 3 NKPHENDIALKPEV---AKPKLPPMFKVLLLNDDYTPMEFVIEVIERFFNKSREQATQIM 59 Query: 95 LKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIME 136 LKVH +G G CG+Y +IAE K+NQV++Y+RQ Q+PLQCI+E Sbjct: 60 LKVHTEGAGICGIYPQDIAETKMNQVVSYARQSQHPLQCIVE 101 >gi|262274511|ref|ZP_06052322.1| ATP-dependent Clp protease adaptor protein ClpS [Grimontia hollisae CIP 101886] gi|262221074|gb|EEY72388.1| ATP-dependent Clp protease adaptor protein ClpS [Grimontia hollisae CIP 101886] Length = 106 Score = 156 bits (396), Expect = 7e-37, Method: Composition-based stats. Identities = 48/93 (51%), Positives = 67/93 (72%) Query: 45 DSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGE 104 D + +K++ P LY+V+L ND+YTPMEFV+ VLQ FF D + A +ML VH++G Sbjct: 13 DVKEAEETKLKPPSLYKVVLNNDDYTPMEFVVEVLQRFFSMDIDKATQLMLTVHYEGRAV 72 Query: 105 CGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 CG+Y E+AEMKV QVM Y+++HQ+PL C ME+ Sbjct: 73 CGIYTAEVAEMKVAQVMMYAKEHQHPLLCTMEK 105 >gi|82703365|ref|YP_412931.1| ATP-dependent Clp protease adaptor protein ClpS [Nitrosospira multiformis ATCC 25196] gi|123544045|sp|Q2Y6T2|CLPS_NITMU RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|82411430|gb|ABB75539.1| ATP-dependent Clp protease adaptor protein ClpS [Nitrosospira multiformis ATCC 25196] Length = 102 Score = 156 bits (396), Expect = 7e-37, Method: Composition-based stats. Identities = 46/87 (52%), Positives = 66/87 (75%) Query: 51 SSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAY 110 SK++ P +++V+L+ND++TPM+FV+ VLQ FF + E A IMLKVH G G CGVY Sbjct: 15 KSKLKPPPMFKVILLNDDFTPMDFVVTVLQTFFSMNREQATQIMLKVHMDGAGVCGVYPN 74 Query: 111 EIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 ++A KV QV+ ++RQHQ+PLQC+ME+ Sbjct: 75 DVASTKVEQVVAFARQHQHPLQCVMEE 101 >gi|84516587|ref|ZP_01003946.1| ATP-dependent Clp protease, adaptor protein ClpS [Loktanella vestfoldensis SKA53] gi|84509623|gb|EAQ06081.1| ATP-dependent Clp protease, adaptor protein ClpS [Loktanella vestfoldensis SKA53] Length = 118 Score = 156 bits (396), Expect = 7e-37, Method: Composition-based stats. Identities = 50/116 (43%), Positives = 74/116 (63%), Gaps = 6/116 (5%) Query: 23 SFIFMADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNF 82 F MAD G L + K + P +Y+VL++ND++TPMEFV+HVL+ F Sbjct: 9 QFHMMADKEDRDGG------NLGVALETKPKTKRPPMYKVLILNDDFTPMEFVVHVLERF 62 Query: 83 FYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 F H A +ML VH +G+ GV+++EIAE KV QVM+++++HQ+PLQC ME++ Sbjct: 63 FGLSHAQAFELMLTVHKKGVAVVGVFSHEIAETKVAQVMDFAQRHQHPLQCTMEKE 118 >gi|330818077|ref|YP_004361782.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia gladioli BSR3] gi|327370470|gb|AEA61826.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia gladioli BSR3] Length = 104 Score = 156 bits (396), Expect = 7e-37, Method: Composition-based stats. Identities = 48/90 (53%), Positives = 67/90 (74%) Query: 48 VRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGV 107 R K++ P +Y+V+L+ND++TPMEFV+ V+Q +F KD ETA IMLKVH +G G CGV Sbjct: 14 ERSEQKLKPPSMYKVVLLNDDFTPMEFVVMVVQEYFKKDRETATQIMLKVHREGRGVCGV 73 Query: 108 YAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 Y +IA KV QV+ ++RQ +PLQC+ME+ Sbjct: 74 YTRDIASTKVEQVVTHARQAGHPLQCVMEE 103 >gi|170769198|ref|ZP_02903651.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia albertii TW07627] gi|170121850|gb|EDS90781.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia albertii TW07627] Length = 106 Score = 156 bits (396), Expect = 7e-37, Method: Composition-based stats. Identities = 47/105 (44%), Positives = 67/105 (63%), Gaps = 2/105 (1%) Query: 33 NKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKC 92 +F+ +E R ++ P +Y+V+LVND+YTPMEFVI VLQ FF D E A Sbjct: 3 KTNDWLDFEQL--AEERVRDALKPPSMYKVILVNDDYTPMEFVIDVLQKFFSYDVERATQ 60 Query: 93 IMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +ML VH+QG CGV+ E+AE KV V Y+R++++PL C +E+ Sbjct: 61 LMLAVHYQGKAICGVFTAEVAETKVAMVNKYARENEHPLLCTLEK 105 >gi|94311825|ref|YP_585035.1| ATP-dependent Clp protease adaptor protein ClpS [Cupriavidus metallidurans CH34] gi|158564205|sp|Q1LJB0|CLPS_RALME RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|93355677|gb|ABF09766.1| regulatory protein for ClpA substrate specificity [Cupriavidus metallidurans CH34] Length = 108 Score = 156 bits (396), Expect = 7e-37, Method: Composition-based stats. Identities = 48/111 (43%), Positives = 70/111 (63%), Gaps = 4/111 (3%) Query: 27 MADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKD 86 MA N E ++ R +++ P +Y+V+L+ND+YTPMEFV+ +LQ +F +D Sbjct: 1 MATRLANTP-QRETGTVIE---RKEQQLKPPAMYKVVLLNDDYTPMEFVVMILQQYFSRD 56 Query: 87 HETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 ETA IML VH +G G CG+Y +IA KV V ++RQ +PLQC+ME+ Sbjct: 57 RETATQIMLTVHREGKGVCGIYTRDIAATKVELVSTHARQAGHPLQCVMEE 107 >gi|205352155|ref|YP_002225956.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|238690486|sp|B5R8G5|CLPS_SALG2 RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|205271936|emb|CAR36780.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|326627199|gb|EGE33542.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 106 Score = 156 bits (396), Expect = 7e-37, Method: Composition-based stats. Identities = 47/105 (44%), Positives = 68/105 (64%), Gaps = 2/105 (1%) Query: 33 NKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKC 92 +FD ++ VR + ++ P +Y+V+LVND+YTPMEFVI VLQ FF D E A Sbjct: 3 KTNDWLDFDQLVEDSVRDA--LKPPSMYKVILVNDDYTPMEFVIDVLQKFFSYDVERATQ 60 Query: 93 IMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +M VH+QG CGV+ E+AE KV V Y+R++++PL C +E+ Sbjct: 61 LMFAVHYQGKAICGVFTAEVAETKVAMVNKYARENEHPLLCTLEK 105 >gi|73542438|ref|YP_296958.1| ATP-dependent Clp protease adaptor protein ClpS [Ralstonia eutropha JMP134] gi|123624188|sp|Q46XL9|CLPS_RALEJ RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|72119851|gb|AAZ62114.1| ATP-dependent Clp protease adaptor protein ClpS [Ralstonia eutropha JMP134] Length = 108 Score = 156 bits (396), Expect = 8e-37, Method: Composition-based stats. Identities = 44/90 (48%), Positives = 64/90 (71%) Query: 48 VRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGV 107 R +++ P +Y+V+L+ND+YTPMEFV+ +LQ +F +D ETA IML VH +G G CG+ Sbjct: 18 ERKEQQLKPPAMYKVVLLNDDYTPMEFVVMILQQYFSRDRETATQIMLTVHREGKGVCGI 77 Query: 108 YAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 Y +IA KV V ++RQ +PLQC+ME+ Sbjct: 78 YTRDIAATKVELVSTHARQAGHPLQCVMEE 107 >gi|255020026|ref|ZP_05292099.1| ATP-dependent Clp protease adaptor protein ClpS [Acidithiobacillus caldus ATCC 51756] gi|254970555|gb|EET28044.1| ATP-dependent Clp protease adaptor protein ClpS [Acidithiobacillus caldus ATCC 51756] Length = 102 Score = 156 bits (396), Expect = 8e-37, Method: Composition-based stats. Identities = 47/102 (46%), Positives = 68/102 (66%) Query: 37 IAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLK 96 + + +++ P YRVLL+ND++TPM++V+ VLQ +F+K HE A IML+ Sbjct: 1 MPSRKEHRQPLLEREPRLKEPSRYRVLLLNDDFTPMDYVVQVLQQYFHKTHEEAVQIMLE 60 Query: 97 VHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 VHH G G CGVY Y++AE KV V +RQHQ+PL+C ME++ Sbjct: 61 VHHSGRGICGVYPYDMAETKVALVTADARQHQHPLRCTMEKE 102 >gi|261344322|ref|ZP_05971966.1| ATP-dependent Clp protease adaptor protein ClpS [Providencia rustigianii DSM 4541] gi|282567927|gb|EFB73462.1| ATP-dependent Clp protease adaptor protein ClpS [Providencia rustigianii DSM 4541] Length = 106 Score = 156 bits (395), Expect = 8e-37, Method: Composition-based stats. Identities = 50/102 (49%), Positives = 66/102 (64%), Gaps = 2/102 (1%) Query: 36 GIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIML 95 G + D +EV ++ P +Y+VLL ND+YTPM+FV+ VLQ FF D E A IML Sbjct: 6 GTFKTDTIFKNEV--EQTLQPPSMYKVLLNNDDYTPMDFVVEVLQKFFSFDEERATQIML 63 Query: 96 KVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 VH QG G CGVY E+AE K QV ++R+H+YPL C +E+ Sbjct: 64 DVHFQGKGSCGVYTAEVAETKAAQVNAFAREHEYPLLCTIEK 105 >gi|53718539|ref|YP_107525.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia pseudomallei K96243] gi|53725847|ref|YP_103843.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia mallei ATCC 23344] gi|67642115|ref|ZP_00440876.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia mallei GB8 horse 4] gi|76810861|ref|YP_332526.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia pseudomallei 1710b] gi|121600243|ref|YP_991923.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia mallei SAVP1] gi|124384404|ref|YP_001027038.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia mallei NCTC 10229] gi|126440545|ref|YP_001058010.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia pseudomallei 668] gi|126448935|ref|YP_001081687.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia mallei NCTC 10247] gi|126455350|ref|YP_001065244.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia pseudomallei 1106a] gi|134281101|ref|ZP_01767810.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia pseudomallei 305] gi|167003875|ref|ZP_02269654.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia mallei PRL-20] gi|167718445|ref|ZP_02401681.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia pseudomallei DM98] gi|167737495|ref|ZP_02410269.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia pseudomallei 14] gi|167814613|ref|ZP_02446293.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia pseudomallei 91] gi|167823083|ref|ZP_02454554.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia pseudomallei 9] gi|167844644|ref|ZP_02470152.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia pseudomallei B7210] gi|167893175|ref|ZP_02480577.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia pseudomallei 7894] gi|167901629|ref|ZP_02488834.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia pseudomallei NCTC 13177] gi|167909878|ref|ZP_02496969.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia pseudomallei 112] gi|167917901|ref|ZP_02504992.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia pseudomallei BCC215] gi|217420084|ref|ZP_03451590.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia pseudomallei 576] gi|226194397|ref|ZP_03789995.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia pseudomallei Pakistan 9] gi|237811161|ref|YP_002895612.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia pseudomallei MSHR346] gi|242318006|ref|ZP_04817022.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia pseudomallei 1106b] gi|254178824|ref|ZP_04885478.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia mallei ATCC 10399] gi|254181505|ref|ZP_04888102.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia pseudomallei 1655] gi|254196779|ref|ZP_04903203.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia pseudomallei S13] gi|254202547|ref|ZP_04908910.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia mallei FMH] gi|254207884|ref|ZP_04914234.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia mallei JHU] gi|254261197|ref|ZP_04952251.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia pseudomallei 1710a] gi|254296418|ref|ZP_04963875.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia pseudomallei 406e] gi|254298242|ref|ZP_04965694.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia pseudomallei 406e] gi|67460237|sp|Q62HH7|CLPS_BURMA RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|67460244|sp|Q63WJ1|CLPS_BURPS RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|123600017|sp|Q3JV77|CLPS_BURP1 RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|158513522|sp|A3NSC3|CLPS_BURP0 RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|166214726|sp|A3MN51|CLPS_BURM7 RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|166214727|sp|A2S519|CLPS_BURM9 RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|166214728|sp|A1V120|CLPS_BURMS RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|166214729|sp|A3N6N9|CLPS_BURP6 RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|52208953|emb|CAH34892.1| conserved hypothetical protein [Burkholderia pseudomallei K96243] gi|52429270|gb|AAU49863.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia mallei ATCC 23344] gi|76580314|gb|ABA49789.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia pseudomallei 1710b] gi|121229053|gb|ABM51571.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia mallei SAVP1] gi|124292424|gb|ABN01693.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia mallei NCTC 10229] gi|126220038|gb|ABN83544.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia pseudomallei 668] gi|126228992|gb|ABN92532.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia pseudomallei 1106a] gi|126241805|gb|ABO04898.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia mallei NCTC 10247] gi|134247407|gb|EBA47492.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia pseudomallei 305] gi|147746794|gb|EDK53871.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia mallei FMH] gi|147751778|gb|EDK58845.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia mallei JHU] gi|157806177|gb|EDO83347.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia pseudomallei 406e] gi|157808080|gb|EDO85250.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia pseudomallei 406e] gi|160694738|gb|EDP84746.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia mallei ATCC 10399] gi|169653522|gb|EDS86215.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia pseudomallei S13] gi|184212043|gb|EDU09086.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia pseudomallei 1655] gi|217397388|gb|EEC37404.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia pseudomallei 576] gi|225933482|gb|EEH29471.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia pseudomallei Pakistan 9] gi|237503292|gb|ACQ95610.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia pseudomallei MSHR346] gi|238523195|gb|EEP86635.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia mallei GB8 horse 4] gi|242141245|gb|EES27647.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia pseudomallei 1106b] gi|243060669|gb|EES42855.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia mallei PRL-20] gi|254219886|gb|EET09270.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia pseudomallei 1710a] Length = 104 Score = 156 bits (395), Expect = 8e-37, Method: Composition-based stats. Identities = 48/90 (53%), Positives = 67/90 (74%) Query: 48 VRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGV 107 R K++ P +Y+V+L+ND++TPMEFV+ V+Q +F KD ETA IMLKVH +G G CGV Sbjct: 14 ERKEQKLKPPSMYKVVLLNDDFTPMEFVVMVVQEYFKKDRETATQIMLKVHREGRGVCGV 73 Query: 108 YAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 Y +IA KV QV+ ++RQ +PLQC+ME+ Sbjct: 74 YTRDIASTKVEQVVTHARQAGHPLQCVMEE 103 >gi|187929804|ref|YP_001900291.1| ATP-dependent Clp protease adaptor protein ClpS [Ralstonia pickettii 12J] gi|241663930|ref|YP_002982290.1| ATP-dependent Clp protease adaptor protein ClpS [Ralstonia pickettii 12D] gi|309781481|ref|ZP_07676217.1| ATP-dependent Clp protease adaptor protein ClpS [Ralstonia sp. 5_7_47FAA] gi|238691811|sp|B2UAR2|CLPS_RALPJ RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|187726694|gb|ACD27859.1| ATP-dependent Clp protease adaptor protein ClpS [Ralstonia pickettii 12J] gi|240865957|gb|ACS63618.1| ATP-dependent Clp protease adaptor protein ClpS [Ralstonia pickettii 12D] gi|308919894|gb|EFP65555.1| ATP-dependent Clp protease adaptor protein ClpS [Ralstonia sp. 5_7_47FAA] Length = 108 Score = 156 bits (395), Expect = 8e-37, Method: Composition-based stats. Identities = 46/104 (44%), Positives = 66/104 (63%) Query: 34 KKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCI 93 ++ + R ++ P +Y+VLL+ND+YTPMEFV+ +LQ +F KD ETA I Sbjct: 4 RQATTPQHDAGTVLERKEQALKPPAMYKVLLLNDDYTPMEFVVMILQQYFSKDRETATQI 63 Query: 94 MLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 ML VH +G G CG+Y +IA KV V ++RQ +PLQC+ME+ Sbjct: 64 MLTVHREGKGVCGLYTRDIAATKVELVSTHARQAGHPLQCVMEE 107 >gi|145299397|ref|YP_001142238.1| ATP-dependent Clp protease adaptor protein ClpS [Aeromonas salmonicida subsp. salmonicida A449] gi|158514051|sp|A4SNL8|CLPS_AERS4 RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|142852169|gb|ABO90490.1| ATP-dependent Clp protease adaptor protein ClpS [Aeromonas salmonicida subsp. salmonicida A449] Length = 105 Score = 156 bits (395), Expect = 8e-37, Method: Composition-based stats. Identities = 45/88 (51%), Positives = 61/88 (69%) Query: 50 FSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYA 109 +K++ P +Y+V+L ND+YTPMEFV+ VLQ FF D + A +ML VH+ G G CG + Sbjct: 17 EKTKLQPPPMYKVVLNNDDYTPMEFVVEVLQKFFGMDLDKATQVMLSVHYSGKGVCGTFT 76 Query: 110 YEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 EIAE KV QV YSR +++PL C ME+ Sbjct: 77 AEIAETKVVQVNTYSRNNEHPLLCTMEK 104 >gi|220904698|ref|YP_002480010.1| ATP-dependent Clp protease adaptor protein ClpS [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219868997|gb|ACL49332.1| ATP-dependent Clp protease adaptor protein ClpS [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 106 Score = 156 bits (395), Expect = 9e-37, Method: Composition-based stats. Identities = 46/103 (44%), Positives = 65/103 (63%) Query: 35 KGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIM 94 + N +S+V K++ P YRVLL ND+YT M+FV+ VL + F K + A IM Sbjct: 2 SSFKQGRNDGESQVIVEKKLKEPDRYRVLLHNDDYTSMDFVVAVLCSIFNKTTQEATAIM 61 Query: 95 LKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 L VH QG+G+CGVY +E+AE KV +V +R +PL+C ME+ Sbjct: 62 LNVHQQGVGQCGVYTHEVAETKVKRVHQAARAAGFPLKCTMEK 104 >gi|215486012|ref|YP_002328443.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli O127:H6 str. E2348/69] gi|254763815|sp|B7UMX3|CLPS_ECO27 RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|215264084|emb|CAS08426.1| regulatory protein for ClpA substrate specificity [Escherichia coli O127:H6 str. E2348/69] Length = 106 Score = 156 bits (395), Expect = 9e-37, Method: Composition-based stats. Identities = 47/105 (44%), Positives = 69/105 (65%), Gaps = 2/105 (1%) Query: 33 NKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKC 92 +F+ + +VR + ++ P +Y+V+LVND+YTPMEFVI VLQ FF D E A Sbjct: 3 KTNDWLDFEQLAEEKVRDA--LKPPSMYKVILVNDDYTPMEFVIDVLQKFFSYDVERATQ 60 Query: 93 IMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +ML VH+QG CGV+ E+AE KV V Y+R++++PL C +E+ Sbjct: 61 LMLAVHYQGKAICGVFTAEVAETKVAMVNKYARENEHPLLCTLEK 105 >gi|91784980|ref|YP_560186.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia xenovorans LB400] gi|170693565|ref|ZP_02884723.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia graminis C4D1M] gi|296157172|ref|ZP_06840008.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia sp. Ch1-1] gi|307730769|ref|YP_003907993.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia sp. CCGE1003] gi|323527132|ref|YP_004229285.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia sp. CCGE1001] gi|122970195|sp|Q13UV5|CLPS_BURXL RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|91688934|gb|ABE32134.1| Putative ATP-dependent Clp protease adaptor protein ClpS [Burkholderia xenovorans LB400] gi|170141347|gb|EDT09517.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia graminis C4D1M] gi|295892508|gb|EFG72290.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia sp. Ch1-1] gi|307585304|gb|ADN58702.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia sp. CCGE1003] gi|323384134|gb|ADX56225.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia sp. CCGE1001] Length = 104 Score = 156 bits (395), Expect = 9e-37, Method: Composition-based stats. Identities = 46/90 (51%), Positives = 67/90 (74%) Query: 48 VRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGV 107 R K++ P +Y+V+L+ND++TPMEFV+ ++Q +F KD ETA +MLKVH +G G CGV Sbjct: 14 ERQEKKLKPPSMYKVVLLNDDFTPMEFVVMIVQEYFNKDRETATQVMLKVHREGRGVCGV 73 Query: 108 YAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 Y +IA KV QV+ ++RQ +PLQC+ME+ Sbjct: 74 YTRDIASTKVEQVVTHARQAGHPLQCVMEE 103 >gi|50121581|ref|YP_050748.1| ATP-dependent Clp protease adaptor protein ClpS [Pectobacterium atrosepticum SCRI1043] gi|67460269|sp|Q6D3T7|CLPS_ERWCT RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|49612107|emb|CAG75557.1| conserved hypothetical protein [Pectobacterium atrosepticum SCRI1043] Length = 106 Score = 156 bits (395), Expect = 9e-37, Method: Composition-based stats. Identities = 45/89 (50%), Positives = 62/89 (69%) Query: 49 RFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVY 108 + K++ P +Y V+L ND+YTPMEFVI VLQ FF D E A +ML VH+QG CGV+ Sbjct: 17 QQKEKLQPPSMYNVVLNNDDYTPMEFVIDVLQKFFSYDIERATQLMLTVHYQGKAICGVF 76 Query: 109 AYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 + E+AE KV QV Y+R+++ PL C +E+ Sbjct: 77 SAEVAETKVVQVNRYARENEQPLLCTLEK 105 >gi|226954273|ref|ZP_03824737.1| protease [Acinetobacter sp. ATCC 27244] gi|294650477|ref|ZP_06727836.1| protease [Acinetobacter haemolyticus ATCC 19194] gi|226835001|gb|EEH67384.1| protease [Acinetobacter sp. ATCC 27244] gi|292823620|gb|EFF82464.1| protease [Acinetobacter haemolyticus ATCC 19194] Length = 130 Score = 156 bits (395), Expect = 9e-37, Method: Composition-based stats. Identities = 45/112 (40%), Positives = 72/112 (64%), Gaps = 2/112 (1%) Query: 29 DSRMNKK-GIAEFDNCLDSEVRFSS-KVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKD 86 D +N + + ++ + V+ + +++ P LY V+L+ND+YTPM+FVI VLQ++F D Sbjct: 17 DWHLNPRLSDSHEEHEGEVVVQTAPPELKRPPLYAVVLMNDDYTPMDFVIEVLQSYFGMD 76 Query: 87 HETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 + A +ML VH++G G G+Y +IAE K NQV NY+R +PL C +E + Sbjct: 77 FDQASQVMLTVHYEGKGTAGIYPRDIAETKANQVNNYARSQGHPLLCQIEPE 128 >gi|187925140|ref|YP_001896782.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia phytofirmans PsJN] gi|238689617|sp|B2T6J4|CLPS_BURPP RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|187716334|gb|ACD17558.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia phytofirmans PsJN] Length = 104 Score = 156 bits (395), Expect = 9e-37, Method: Composition-based stats. Identities = 47/90 (52%), Positives = 67/90 (74%) Query: 48 VRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGV 107 R K++ P +Y+V+L+ND++TPMEFV+ V+Q +F KD ETA +MLKVH +G G CGV Sbjct: 14 ERQEKKLKPPSMYKVVLLNDDFTPMEFVVMVVQEYFNKDRETATQVMLKVHREGRGVCGV 73 Query: 108 YAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 Y +IA KV QV+ ++RQ +PLQC+ME+ Sbjct: 74 YTRDIASTKVEQVVTHARQAGHPLQCVMEE 103 >gi|331672424|ref|ZP_08373214.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli TA280] gi|331070330|gb|EGI41695.1| ATP-dependent Clp protease adaptor protein ClpS [Escherichia coli TA280] Length = 106 Score = 156 bits (395), Expect = 9e-37, Method: Composition-based stats. Identities = 48/105 (45%), Positives = 69/105 (65%), Gaps = 2/105 (1%) Query: 33 NKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKC 92 +FD + +VR + ++ P +Y+V+LVND+YTPMEFVI VLQ FF D E A Sbjct: 3 KTNDWLDFDQLAEEKVRDA--LKPPSMYKVILVNDDYTPMEFVIDVLQKFFSYDVERATQ 60 Query: 93 IMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +ML VH+QG CGV+ E+AE KV V Y+R++++PL C +E+ Sbjct: 61 LMLAVHYQGKAICGVFIAEVAETKVAMVNKYARENEHPLLCTLEK 105 >gi|33597157|ref|NP_884800.1| ATP-dependent Clp protease adaptor protein ClpS [Bordetella parapertussis 12822] gi|33601001|ref|NP_888561.1| ATP-dependent Clp protease adaptor protein ClpS [Bordetella bronchiseptica RB50] gi|39931037|sp|Q7W7E8|CLPS_BORPA RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|39931045|sp|Q7WKT7|CLPS_BORBR RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|33566608|emb|CAE37866.1| hypothetical protein BPP2572 [Bordetella parapertussis] gi|33575436|emb|CAE32514.1| hypothetical protein BB2017 [Bordetella bronchiseptica RB50] Length = 104 Score = 156 bits (395), Expect = 9e-37, Method: Composition-based stats. Identities = 48/101 (47%), Positives = 65/101 (64%), Gaps = 1/101 (0%) Query: 38 AEFDNCLDSEVRFSS-KVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLK 96 + D D V + P +Y+V+L+ND+YTPMEFV+ VLQ FF K+ E A IML+ Sbjct: 3 STLDTQHDVVVEKQPARTAPPPMYQVVLLNDDYTPMEFVVKVLQKFFGKNSEDATRIMLQ 62 Query: 97 VHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 VHH+G CGVY ++A ++ QV Y+R Q+PLQCIME Sbjct: 63 VHHEGRAVCGVYPRDLAATRIAQVSQYARARQHPLQCIMEP 103 >gi|330829987|ref|YP_004392939.1| ATP-dependent Clp protease adapter protein clpS [Aeromonas veronii B565] gi|328805123|gb|AEB50322.1| ATP-dependent Clp protease adapter protein clpS [Aeromonas veronii B565] Length = 105 Score = 156 bits (395), Expect = 1e-36, Method: Composition-based stats. Identities = 44/93 (47%), Positives = 63/93 (67%) Query: 45 DSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGE 104 + +K++ P +Y+V+L ND+YTPMEFV+ VLQ FF D + A +ML VH+ G G Sbjct: 12 EIAEAEKTKLQPPPMYKVVLNNDDYTPMEFVVEVLQKFFGMDLDKATQVMLSVHYSGKGV 71 Query: 105 CGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 CG++ EIAE KV QV Y+R +++PL C ME+ Sbjct: 72 CGMFTAEIAETKVVQVNTYARNNEHPLLCTMEK 104 >gi|188576738|ref|YP_001913667.1| ATP-dependent Clp protease adaptor protein ClpS [Xanthomonas oryzae pv. oryzae PXO99A] gi|188576929|ref|YP_001913858.1| ATP-dependent Clp protease adaptor protein ClpS [Xanthomonas oryzae pv. oryzae PXO99A] gi|325927856|ref|ZP_08189080.1| hypothetical protein XPE_3120 [Xanthomonas perforans 91-118] gi|188521190|gb|ACD59135.1| ATP-dependent Clp protease adaptor protein ClpS [Xanthomonas oryzae pv. oryzae PXO99A] gi|188521381|gb|ACD59326.1| ATP-dependent Clp protease adaptor protein ClpS [Xanthomonas oryzae pv. oryzae PXO99A] gi|325541696|gb|EGD13214.1| hypothetical protein XPE_3120 [Xanthomonas perforans 91-118] Length = 93 Score = 156 bits (395), Expect = 1e-36, Method: Composition-based stats. Identities = 47/87 (54%), Positives = 61/87 (70%) Query: 51 SSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAY 110 +V P Y+VLL+ND+YTPM+FV+ VL+ FF + E A IML VH +G G CGVY+ Sbjct: 6 KPEVAPPPRYQVLLLNDDYTPMDFVVTVLEQFFNLNLEQATQIMLHVHTRGRGVCGVYSR 65 Query: 111 EIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 E+AE KV QV +SR +Q+PL C MEQ Sbjct: 66 EVAESKVAQVNEFSRMNQHPLLCTMEQ 92 >gi|116050608|ref|YP_790573.1| ATP-dependent Clp protease adaptor protein ClpS [Pseudomonas aeruginosa UCBPP-PA14] gi|152987145|ref|YP_001347950.1| ATP-dependent Clp protease adaptor protein ClpS [Pseudomonas aeruginosa PA7] gi|296388919|ref|ZP_06878394.1| ATP-dependent Clp protease adaptor protein ClpS [Pseudomonas aeruginosa PAb1] gi|12230856|sp|Q9I0L7|CLPS_PSEAE RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|122259731|sp|Q02NB3|CLPS_PSEAB RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|166214738|sp|A6V4G5|CLPS_PSEA7 RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|115585829|gb|ABJ11844.1| ATP-dependent Clp protease adaptor protein clpS [Pseudomonas aeruginosa UCBPP-PA14] gi|150962303|gb|ABR84328.1| conserved hypothetical protein [Pseudomonas aeruginosa PA7] Length = 122 Score = 156 bits (395), Expect = 1e-36, Method: Composition-based stats. Identities = 42/109 (38%), Positives = 63/109 (57%) Query: 29 DSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHE 88 + + E + + ++ P LY+V+L ND+YTPM+FV+ VL+ FF D E Sbjct: 12 NQDHPEPHEHEDEGAGLAVQESKPVLQPPPLYKVVLFNDDYTPMDFVVEVLEVFFNMDRE 71 Query: 89 TAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 A IML VH QG CG++ ++AE K QV Y+R+ Q+PL C +E+ Sbjct: 72 KATKIMLTVHTQGKAVCGLFTRDVAETKAMQVNQYARESQHPLLCEIEK 120 >gi|33593716|ref|NP_881360.1| ATP-dependent Clp protease adaptor protein ClpS [Bordetella pertussis Tohama I] gi|39931026|sp|Q7VVC1|CLPS_BORPE RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|33563789|emb|CAE43031.1| hypothetical protein BP2756 [Bordetella pertussis Tohama I] Length = 104 Score = 156 bits (394), Expect = 1e-36, Method: Composition-based stats. Identities = 48/101 (47%), Positives = 65/101 (64%), Gaps = 1/101 (0%) Query: 38 AEFDNCLDSEVRFSS-KVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLK 96 + D D V + P +Y+V+L+ND+YTPMEFV+ VLQ FF K+ E A IML+ Sbjct: 3 STLDTQHDVVVEKQPARTAPPPMYQVVLLNDDYTPMEFVVKVLQKFFGKNSEDATRIMLQ 62 Query: 97 VHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 VHH+G CGVY ++A ++ QV Y+R Q+PLQCIME Sbjct: 63 VHHEGRAVCGVYPRDLAATRIAQVSQYARARQHPLQCIMEP 103 >gi|325981356|ref|YP_004293758.1| ATP-dependent Clp protease adaptor protein ClpS [Nitrosomonas sp. AL212] gi|325530875|gb|ADZ25596.1| ATP-dependent Clp protease adaptor protein ClpS [Nitrosomonas sp. AL212] Length = 102 Score = 156 bits (394), Expect = 1e-36, Method: Composition-based stats. Identities = 46/101 (45%), Positives = 71/101 (70%) Query: 37 IAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLK 96 + E + + K + P LY++LL+ND++TPMEFV+ VL++FF + E A IMLK Sbjct: 1 MTESKSETVKLSQEKVKYKPPPLYKILLLNDDFTPMEFVVEVLKSFFSMNQEQATLIMLK 60 Query: 97 VHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 VH +G+G CG+Y +IA KV QV+ +SR++Q+PL+C+ME+ Sbjct: 61 VHTEGVGVCGIYPGDIASTKVKQVIEFSRRNQHPLRCVMEE 101 >gi|28870518|ref|NP_793137.1| hypothetical protein PSPTO_3354 [Pseudomonas syringae pv. tomato str. DC3000] gi|213970047|ref|ZP_03398179.1| hypothetical protein PSPTOT1_5283 [Pseudomonas syringae pv. tomato T1] gi|301381402|ref|ZP_07229820.1| ATP-dependent Clp protease adaptor protein ClpS [Pseudomonas syringae pv. tomato Max13] gi|302058400|ref|ZP_07249941.1| ATP-dependent Clp protease adaptor protein ClpS [Pseudomonas syringae pv. tomato K40] gi|302130351|ref|ZP_07256341.1| ATP-dependent Clp protease adaptor protein ClpS [Pseudomonas syringae pv. tomato NCPPB 1108] gi|37077076|sp|Q87ZS0|CLPS_PSESM RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|28853766|gb|AAO56832.1| conserved protein of unknown function [Pseudomonas syringae pv. tomato str. DC3000] gi|213925151|gb|EEB58714.1| hypothetical protein PSPTOT1_5283 [Pseudomonas syringae pv. tomato T1] gi|330965608|gb|EGH65868.1| ATP-dependent Clp protease adaptor protein ClpS [Pseudomonas syringae pv. actinidiae str. M302091] gi|331017259|gb|EGH97315.1| ATP-dependent Clp protease adaptor protein ClpS [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 120 Score = 156 bits (394), Expect = 1e-36, Method: Composition-based stats. Identities = 40/106 (37%), Positives = 63/106 (59%) Query: 32 MNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAK 91 + E D+ + ++ P +Y+V+L ND+YTPM+FV+ VL+ FF + E A Sbjct: 13 QDGPQSHEDDSAGIAVQDAKPTLQAPPMYKVVLFNDDYTPMDFVVEVLEVFFNLNRELAT 72 Query: 92 CIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +ML VH +G CG++ +IAE K QV Y+R+ Q+PL C +E+ Sbjct: 73 KVMLAVHTEGRAVCGLFTRDIAETKAAQVNQYARESQHPLLCEIEK 118 >gi|238028418|ref|YP_002912649.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia glumae BGR1] gi|237877612|gb|ACR29945.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia glumae BGR1] Length = 104 Score = 156 bits (394), Expect = 1e-36, Method: Composition-based stats. Identities = 47/90 (52%), Positives = 67/90 (74%) Query: 48 VRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGV 107 R K++ P +Y+V+L+ND++TPMEFV+ V+Q +F KD ETA IML+VH +G G CGV Sbjct: 14 ERSEQKLKPPSMYKVVLLNDDFTPMEFVVMVVQEYFKKDRETATQIMLRVHREGRGVCGV 73 Query: 108 YAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 Y +IA KV QV+ ++RQ +PLQC+ME+ Sbjct: 74 YTRDIASTKVEQVVTHARQAGHPLQCVMEE 103 >gi|153835790|ref|ZP_01988457.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio harveyi HY01] gi|156973856|ref|YP_001444763.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio harveyi ATCC BAA-1116] gi|269960956|ref|ZP_06175325.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio harveyi 1DA3] gi|166214749|sp|A7N1L5|CLPS_VIBHB RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|148867478|gb|EDL66853.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio harveyi HY01] gi|156525450|gb|ABU70536.1| hypothetical protein VIBHAR_01566 [Vibrio harveyi ATCC BAA-1116] gi|269834175|gb|EEZ88265.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio harveyi 1DA3] Length = 106 Score = 156 bits (394), Expect = 1e-36, Method: Composition-based stats. Identities = 52/93 (55%), Positives = 67/93 (72%) Query: 45 DSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGE 104 D R S+KV+ PKLY V+L ND+YTPM+FVI VL+ FF D + A IMLK+H++G Sbjct: 13 DLLERESTKVQPPKLYNVVLNNDDYTPMDFVIEVLERFFSHDIDKATQIMLKIHYEGKAI 72 Query: 105 CGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 CG Y+ EIAE KV QV YSR++++PL C MEQ Sbjct: 73 CGTYSAEIAETKVAQVTMYSRENEHPLLCTMEQ 105 >gi|134095622|ref|YP_001100697.1| ATP-dependent Clp protease adaptor protein ClpS [Herminiimonas arsenicoxydans] gi|254763818|sp|A4G7T9|CLPS_HERAR RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|133739525|emb|CAL62576.1| ATP-dependent Clp protease adaptor protein ClpS [Herminiimonas arsenicoxydans] Length = 102 Score = 156 bits (394), Expect = 1e-36, Method: Composition-based stats. Identities = 48/89 (53%), Positives = 65/89 (73%) Query: 49 RFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVY 108 R K++ P +Y+VLL+ND+YTPMEFV+ +LQ +F KD ETA IML VH G G CGVY Sbjct: 13 RQEQKLKPPSMYQVLLLNDDYTPMEFVVMILQEYFSKDRETATQIMLMVHRDGKGICGVY 72 Query: 109 AYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +IA KV V+N++R+ +PLQC+ME+ Sbjct: 73 PKDIASTKVELVLNHARKAGHPLQCVMEE 101 >gi|88860127|ref|ZP_01134766.1| modulator of ClpA substrate specificity [Pseudoalteromonas tunicata D2] gi|88818121|gb|EAR27937.1| modulator of ClpA substrate specificity [Pseudoalteromonas tunicata D2] Length = 105 Score = 156 bits (394), Expect = 1e-36, Method: Composition-based stats. Identities = 51/103 (49%), Positives = 64/103 (62%) Query: 35 KGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIM 94 G+ E D K+R PK Y V+L ND+YTPM+FVI V+ FF K E A IM Sbjct: 2 SGLKESDLIDTVRENEKQKLRPPKQYHVILNNDDYTPMDFVIEVIMKFFNKTSEQAAEIM 61 Query: 95 LKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 LKVH++G CGVY+ EIAE KV QV Y+R +++PL C EQ Sbjct: 62 LKVHYEGKAVCGVYSAEIAETKVAQVNQYARDNEHPLLCSYEQ 104 >gi|258405491|ref|YP_003198233.1| ATP-dependent Clp protease adaptor protein ClpS [Desulfohalobium retbaense DSM 5692] gi|257797718|gb|ACV68655.1| ATP-dependent Clp protease adaptor protein ClpS [Desulfohalobium retbaense DSM 5692] Length = 103 Score = 156 bits (394), Expect = 1e-36, Method: Composition-based stats. Identities = 46/99 (46%), Positives = 60/99 (60%) Query: 39 EFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVH 98 E D + E + V+ P Y+VLL ND+YT MEFV+ VL + F K A IML VH Sbjct: 4 ENDPRIVPEKGEETAVKEPSRYKVLLHNDDYTTMEFVVQVLMDIFNKSEAEATQIMLNVH 63 Query: 99 HQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 G+G CG+Y E+AE KV V +R+H YPL+C ME+ Sbjct: 64 KNGVGVCGIYTAEVAETKVAMVSQMARKHGYPLKCTMEE 102 >gi|312795291|ref|YP_004028213.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia rhizoxinica HKI 454] gi|312167066|emb|CBW74069.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia rhizoxinica HKI 454] Length = 104 Score = 156 bits (394), Expect = 1e-36, Method: Composition-based stats. Identities = 48/90 (53%), Positives = 67/90 (74%) Query: 48 VRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGV 107 R K + P +YRV+L+ND++TPMEFV+ V+Q +F KD +TA IMLKVH++G G CGV Sbjct: 14 ERQEHKAKPPSMYRVVLLNDDFTPMEFVVMVIQQYFNKDRDTATQIMLKVHYEGRGICGV 73 Query: 108 YAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 Y +IA KV QV+ ++RQ +PLQC+ME+ Sbjct: 74 YTRDIASTKVEQVVTHARQAGHPLQCVMEE 103 >gi|187478584|ref|YP_786608.1| ATP-dependent Clp protease adaptor protein ClpS [Bordetella avium 197N] gi|123514730|sp|Q2KZI1|CLPS_BORA1 RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|115423170|emb|CAJ49701.1| ATP-dependent clp protease adaptor protein [Bordetella avium 197N] Length = 104 Score = 156 bits (394), Expect = 1e-36, Method: Composition-based stats. Identities = 47/90 (52%), Positives = 65/90 (72%) Query: 48 VRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGV 107 + S++ P +Y+V+L+ND+YTPMEFV+ VLQ FF K+ E A IML+VHH+G G CGV Sbjct: 14 EKQSARTAPPPMYQVVLLNDDYTPMEFVVKVLQKFFGKNQEEATRIMLQVHHEGRGICGV 73 Query: 108 YAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 Y ++A ++ QV Y+R Q+PLQCIME Sbjct: 74 YVRDVAATRIAQVAQYARARQHPLQCIMEP 103 >gi|262279297|ref|ZP_06057082.1| substrate modulator for ClpAP [Acinetobacter calcoaceticus RUH2202] gi|293607903|ref|ZP_06690206.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|299769891|ref|YP_003731917.1| ATP-dependent Clp protease adaptor protein ClpS [Acinetobacter sp. DR1] gi|262259648|gb|EEY78381.1| substrate modulator for ClpAP [Acinetobacter calcoaceticus RUH2202] gi|292828476|gb|EFF86838.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|298699979|gb|ADI90544.1| ATP-dependent Clp protease adaptor protein ClpS [Acinetobacter sp. DR1] gi|325122454|gb|ADY81977.1| ATP-dependent Clp protease adaptor protein ClpS [Acinetobacter calcoaceticus PHEA-2] Length = 137 Score = 156 bits (394), Expect = 1e-36, Method: Composition-based stats. Identities = 43/108 (39%), Positives = 66/108 (61%), Gaps = 1/108 (0%) Query: 31 RMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETA 90 R++ + D + + +++ P LY V+L+ND+YTPM+FVI +LQ +F + + A Sbjct: 30 RLSDSQNEDHDGEVVVQT-APPELKRPPLYAVVLMNDDYTPMDFVIEILQQYFAMNLDQA 88 Query: 91 KCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 +ML VH++G G GVY +IAE K N V NY+R +PL C +E K Sbjct: 89 TQVMLTVHYEGKGIAGVYPRDIAETKANLVNNYARSQGHPLLCQIEPK 136 >gi|325526418|gb|EGD04006.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia sp. TJI49] Length = 104 Score = 156 bits (394), Expect = 1e-36, Method: Composition-based stats. Identities = 48/90 (53%), Positives = 67/90 (74%) Query: 48 VRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGV 107 R K++ P +Y+V+L+ND++TPMEFV+ V+Q +F KD ETA IMLKVH +G G CGV Sbjct: 14 ERKEQKLKPPSMYKVVLLNDDFTPMEFVVMVVQEYFKKDRETATQIMLKVHREGRGVCGV 73 Query: 108 YAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 Y +IA KV QV+ ++RQ +PLQC+ME+ Sbjct: 74 YTRDIASTKVEQVVTHARQAGHPLQCVMEE 103 >gi|297539530|ref|YP_003675299.1| ATP-dependent Clp protease adaptor protein ClpS [Methylotenera sp. 301] gi|297258877|gb|ADI30722.1| ATP-dependent Clp protease adaptor protein ClpS [Methylotenera sp. 301] Length = 108 Score = 156 bits (394), Expect = 1e-36, Method: Composition-based stats. Identities = 50/99 (50%), Positives = 69/99 (69%), Gaps = 3/99 (3%) Query: 39 EFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVH 98 E D L EV +K ++P ++ VLL+ND+YTPMEFV+ ++ FF K E A IMLKVH Sbjct: 12 ENDVALKPEV---AKPKLPPMFNVLLLNDDYTPMEFVVECIERFFNKSREQATQIMLKVH 68 Query: 99 HQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +G+ CGVY +IAE K+NQV++Y+R Q+PLQC+ E Sbjct: 69 TEGLAVCGVYPQDIAETKMNQVLSYARDQQHPLQCVTEP 107 >gi|83721401|ref|YP_441318.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia thailandensis E264] gi|167561846|ref|ZP_02354762.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia oklahomensis EO147] gi|167569069|ref|ZP_02361943.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia oklahomensis C6786] gi|167580102|ref|ZP_02372976.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia thailandensis TXDOH] gi|167618167|ref|ZP_02386798.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia thailandensis Bt4] gi|257140007|ref|ZP_05588269.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia thailandensis E264] gi|123537862|sp|Q2T0I1|CLPS_BURTA RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|83655226|gb|ABC39289.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia thailandensis E264] Length = 104 Score = 156 bits (394), Expect = 1e-36, Method: Composition-based stats. Identities = 47/90 (52%), Positives = 67/90 (74%) Query: 48 VRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGV 107 R K++ P +Y+V+L+ND++TPMEFV+ ++Q +F KD ETA IMLKVH +G G CGV Sbjct: 14 ERKEQKLKPPSMYKVVLLNDDFTPMEFVVMIVQEYFKKDRETATQIMLKVHREGRGVCGV 73 Query: 108 YAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 Y +IA KV QV+ ++RQ +PLQC+ME+ Sbjct: 74 YTRDIASTKVEQVVTHARQAGHPLQCVMEE 103 >gi|118591081|ref|ZP_01548480.1| ATP-dependent Clp protease adaptor protein ClpS [Stappia aggregata IAM 12614] gi|118436157|gb|EAV42799.1| ATP-dependent Clp protease adaptor protein ClpS [Stappia aggregata IAM 12614] Length = 121 Score = 156 bits (394), Expect = 1e-36, Method: Composition-based stats. Identities = 62/122 (50%), Positives = 84/122 (68%), Gaps = 3/122 (2%) Query: 17 GILALMSFIFMADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVI 76 G++ A S + G D + R + + P LYRVLL+ND+YTPMEFVI Sbjct: 3 GVIEAKETAMSAGSDYDNDG---GDAGTVTVTRTKTVTKRPNLYRVLLLNDDYTPMEFVI 59 Query: 77 HVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIME 136 HV++NFF K+ E A IML VHH G+GECG+Y+YE+AE KV QVM+++R+HQ+PLQC+ME Sbjct: 60 HVVENFFQKNREEATRIMLHVHHHGVGECGIYSYEVAETKVTQVMDFARKHQHPLQCVME 119 Query: 137 QK 138 +K Sbjct: 120 KK 121 >gi|254503825|ref|ZP_05115976.1| ATP-dependent Clp protease adaptor protein ClpS [Labrenzia alexandrii DFL-11] gi|222439896|gb|EEE46575.1| ATP-dependent Clp protease adaptor protein ClpS [Labrenzia alexandrii DFL-11] Length = 110 Score = 156 bits (394), Expect = 1e-36, Method: Composition-based stats. Identities = 55/82 (67%), Positives = 71/82 (86%) Query: 57 PKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMK 116 P LYRVLL+ND+YTPMEFVIHV+++FF K+ E A IML VHH G+GECG+Y YE+AE K Sbjct: 29 PNLYRVLLLNDDYTPMEFVIHVVESFFQKNREEATRIMLHVHHHGVGECGIYTYEVAETK 88 Query: 117 VNQVMNYSRQHQYPLQCIMEQK 138 V QVM+++R+HQ+PLQC+ME+K Sbjct: 89 VTQVMDFARRHQHPLQCVMEKK 110 >gi|78067320|ref|YP_370089.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia sp. 383] gi|107023457|ref|YP_621784.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia cenocepacia AU 1054] gi|115352618|ref|YP_774457.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia ambifaria AMMD] gi|116690539|ref|YP_836162.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia cenocepacia HI2424] gi|134296692|ref|YP_001120427.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia vietnamiensis G4] gi|161523956|ref|YP_001578968.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia multivorans ATCC 17616] gi|167585699|ref|ZP_02378087.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia ubonensis Bu] gi|170697705|ref|ZP_02888793.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia ambifaria IOP40-10] gi|170733880|ref|YP_001765827.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia cenocepacia MC0-3] gi|171319748|ref|ZP_02908836.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia ambifaria MEX-5] gi|172061479|ref|YP_001809131.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia ambifaria MC40-6] gi|189351283|ref|YP_001946911.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia multivorans ATCC 17616] gi|206561069|ref|YP_002231834.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia cenocepacia J2315] gi|221199250|ref|ZP_03572294.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia multivorans CGD2M] gi|221205848|ref|ZP_03578863.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia multivorans CGD2] gi|221211472|ref|ZP_03584451.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia multivorans CGD1] gi|254247420|ref|ZP_04940741.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia cenocepacia PC184] gi|254251618|ref|ZP_04944936.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia dolosa AUO158] gi|122322413|sp|Q0BCK0|CLPS_BURCM RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|123371357|sp|Q1BU94|CLPS_BURCA RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|123567808|sp|Q39DM1|CLPS_BURS3 RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|166214725|sp|A0K9U2|CLPS_BURCH RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|166214730|sp|A4JH39|CLPS_BURVG RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|238687030|sp|A9AGM9|CLPS_BURM1 RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|238688602|sp|B1JXD0|CLPS_BURCC RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|238692854|sp|B1YVB1|CLPS_BURA4 RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|238693085|sp|B4E904|CLPS_BURCJ RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|77968065|gb|ABB09445.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia sp. 383] gi|105893646|gb|ABF76811.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia cenocepacia AU 1054] gi|115282606|gb|ABI88123.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia ambifaria AMMD] gi|116648628|gb|ABK09269.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia cenocepacia HI2424] gi|124872196|gb|EAY63912.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia cenocepacia PC184] gi|124894227|gb|EAY68107.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia dolosa AUO158] gi|134139849|gb|ABO55592.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia vietnamiensis G4] gi|160341385|gb|ABX14471.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia multivorans ATCC 17616] gi|169817122|gb|ACA91705.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia cenocepacia MC0-3] gi|170137453|gb|EDT05693.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia ambifaria IOP40-10] gi|171095020|gb|EDT40043.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia ambifaria MEX-5] gi|171993996|gb|ACB64915.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia ambifaria MC40-6] gi|189335305|dbj|BAG44375.1| ATP-dependent Clp protease adaptor protein [Burkholderia multivorans ATCC 17616] gi|198037111|emb|CAR53032.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia cenocepacia J2315] gi|221168833|gb|EEE01301.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia multivorans CGD1] gi|221174686|gb|EEE07118.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia multivorans CGD2] gi|221180535|gb|EEE12938.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia multivorans CGD2M] Length = 104 Score = 155 bits (393), Expect = 1e-36, Method: Composition-based stats. Identities = 48/90 (53%), Positives = 67/90 (74%) Query: 48 VRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGV 107 R K++ P +Y+V+L+ND++TPMEFV+ V+Q +F KD ETA IMLKVH +G G CGV Sbjct: 14 ERKQQKLKPPSMYKVVLLNDDFTPMEFVVMVVQEYFKKDRETATQIMLKVHREGRGVCGV 73 Query: 108 YAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 Y +IA KV QV+ ++RQ +PLQC+ME+ Sbjct: 74 YTRDIASTKVEQVVTHARQAGHPLQCVMEE 103 >gi|307545652|ref|YP_003898131.1| ATP-dependent Clp protease adaptor protein ClpS [Halomonas elongata DSM 2581] gi|307217676|emb|CBV42946.1| ATP-dependent Clp protease adaptor protein ClpS [Halomonas elongata DSM 2581] Length = 121 Score = 155 bits (393), Expect = 1e-36, Method: Composition-based stats. Identities = 49/114 (42%), Positives = 68/114 (59%), Gaps = 3/114 (2%) Query: 26 FMADSRMNKKGIAEFDNCLDSEVRF---SSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNF 82 +A R E D D +V ++ P +Y+V+L ND++TPMEFV+ VLQ F Sbjct: 4 RLAPYRAGMTRPPEPDEEGDGDVAVQSSEPELAHPPMYKVVLHNDDFTPMEFVVEVLQTF 63 Query: 83 FYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIME 136 F+ D ETA IML VH QG CG++ +IAE K +QV Y+R+ Q+PL C +E Sbjct: 64 FHMDSETAVQIMLAVHTQGKATCGIFTRDIAETKSHQVNQYARECQHPLLCDIE 117 >gi|121604835|ref|YP_982164.1| ATP-dependent Clp protease adaptor protein ClpS [Polaromonas naphthalenivorans CJ2] gi|120593804|gb|ABM37243.1| ATP-dependent Clp protease adaptor protein ClpS [Polaromonas naphthalenivorans CJ2] Length = 145 Score = 155 bits (393), Expect = 2e-36, Method: Composition-based stats. Identities = 45/90 (50%), Positives = 65/90 (72%) Query: 48 VRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGV 107 R K + P++Y+V+L+ND+YTPMEFV+ V+Q FF KD ETA IMLK+H G G CGV Sbjct: 54 ERRPQKTKPPQMYQVVLLNDDYTPMEFVVVVIQEFFNKDRETATQIMLKIHLDGKGICGV 113 Query: 108 YAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 ++ ++A KV+QV +R++ +PLQC+ E Sbjct: 114 FSRDVAATKVDQVTEAARKNGHPLQCVSEP 143 >gi|114320604|ref|YP_742287.1| ATP-dependent Clp protease adaptor protein ClpS [Alkalilimnicola ehrlichii MLHE-1] gi|122311718|sp|Q0A8P0|CLPS_ALHEH RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|114226998|gb|ABI56797.1| ATP-dependent Clp protease adaptor protein ClpS [Alkalilimnicola ehrlichii MLHE-1] Length = 106 Score = 155 bits (393), Expect = 2e-36, Method: Composition-based stats. Identities = 45/106 (42%), Positives = 71/106 (66%), Gaps = 1/106 (0%) Query: 32 MNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAK 91 M K ++ E +V+ P L++V+++ND+YTPM+FV+ VLQ FF+ D A Sbjct: 1 MTDKAGDWQEHGPQVE-EAPPQVKRPPLFKVIILNDDYTPMDFVVEVLQKFFHMDRARAT 59 Query: 92 CIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +ML VH +G G CGV++ ++AE KVNQV ++SRQH++PL C +++ Sbjct: 60 QVMLHVHTRGEGVCGVFSRDVAETKVNQVNDWSRQHEHPLMCTLKE 105 >gi|294636953|ref|ZP_06715277.1| ATP-dependent Clp protease adaptor protein ClpS [Edwardsiella tarda ATCC 23685] gi|291089846|gb|EFE22407.1| ATP-dependent Clp protease adaptor protein ClpS [Edwardsiella tarda ATCC 23685] Length = 106 Score = 155 bits (393), Expect = 2e-36, Method: Composition-based stats. Identities = 44/92 (47%), Positives = 61/92 (66%) Query: 46 SEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGEC 105 ++ R V+ P LY V+L ND+YTPMEFVI VLQ FF D E A +ML VH++G C Sbjct: 14 ADERTREAVKPPSLYSVILNNDDYTPMEFVIEVLQKFFTYDIERATQLMLTVHYKGKAVC 73 Query: 106 GVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 GV+ E+AE KV + Y+R++ +PL C +E+ Sbjct: 74 GVFTAEVAETKVALINRYARENDHPLLCTLEK 105 >gi|163802085|ref|ZP_02195981.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio sp. AND4] gi|159174226|gb|EDP59034.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio sp. AND4] Length = 106 Score = 155 bits (393), Expect = 2e-36, Method: Composition-based stats. Identities = 52/93 (55%), Positives = 66/93 (70%) Query: 45 DSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGE 104 D R S+KV+ PKLY V+L ND+YTPM+FVI VL+ FF D + A IMLK+H+ G Sbjct: 13 DLLERESTKVQPPKLYNVVLNNDDYTPMDFVIEVLERFFSHDIDKATQIMLKIHYDGKAI 72 Query: 105 CGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 CG Y+ EIAE KV QV YSR++++PL C MEQ Sbjct: 73 CGTYSAEIAETKVAQVTMYSRENEHPLLCTMEQ 105 >gi|289805673|ref|ZP_06536302.1| ATP-dependent Clp protease adaptor protein ClpS [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 107 Score = 155 bits (393), Expect = 2e-36, Method: Composition-based stats. Identities = 47/103 (45%), Positives = 66/103 (64%), Gaps = 2/103 (1%) Query: 33 NKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKC 92 +FD ++ VR + ++ P +Y+V+LVND+YTPMEFVI VLQ FF D E A Sbjct: 3 KTNDWLDFDQLVEDSVRDA--LKPPSMYKVILVNDDYTPMEFVIDVLQKFFSYDVERATQ 60 Query: 93 IMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIM 135 +ML VH+QG CGV+ E+AE KV V Y+R++++PL C Sbjct: 61 LMLAVHYQGKAICGVFTAEVAETKVAMVNKYARENEHPLLCTT 103 >gi|332088859|gb|EGI93971.1| ATP-dependent Clp protease adaptor protein ClpS family protein [Shigella boydii 5216-82] Length = 106 Score = 155 bits (393), Expect = 2e-36, Method: Composition-based stats. Identities = 47/105 (44%), Positives = 68/105 (64%), Gaps = 2/105 (1%) Query: 33 NKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKC 92 +FD + +VR ++ P +Y+V+LVND+YTPMEFVI VLQ FF D E A Sbjct: 3 KTNDWLDFDQLAEEKVR--DALKPPSMYKVILVNDDYTPMEFVIDVLQKFFSYDVERATQ 60 Query: 93 IMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +ML VH+QG CGV+ E+AE K+ V Y+R++++PL C +E+ Sbjct: 61 LMLAVHYQGKAICGVFTAEVAETKMAMVNKYARENEHPLLCTLEK 105 >gi|239994276|ref|ZP_04714800.1| ATP-dependent Clp protease adaptor protein ClpS [Alteromonas macleodii ATCC 27126] gi|238693285|sp|B4S1R5|CLPS_ALTMD RecName: Full=ATP-dependent Clp protease adapter protein ClpS Length = 106 Score = 155 bits (393), Expect = 2e-36, Method: Composition-based stats. Identities = 48/88 (54%), Positives = 60/88 (68%) Query: 50 FSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYA 109 K + P +Y+VLL ND+YTPM+FVI VL FF D E A +ML VH+QG CG++ Sbjct: 18 QRQKPQPPPMYKVLLNNDDYTPMDFVIEVLMQFFNMDAEKANQLMLTVHYQGKAVCGIFT 77 Query: 110 YEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 EIAE KV QV Y+R+HQ+PL C MEQ Sbjct: 78 AEIAETKVMQVNQYARKHQHPLMCTMEQ 105 >gi|70731245|ref|YP_260986.1| ATP-dependent Clp protease adaptor protein ClpS [Pseudomonas fluorescens Pf-5] gi|123654447|sp|Q4K9U7|CLPS_PSEF5 RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|68345544|gb|AAY93150.1| ATP-dependent Clp protease adaptor protein ClpS [Pseudomonas fluorescens Pf-5] Length = 120 Score = 155 bits (393), Expect = 2e-36, Method: Composition-based stats. Identities = 39/106 (36%), Positives = 65/106 (61%) Query: 32 MNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAK 91 ++ + + D+ + ++ P +Y+V+L ND+YTPM+FV+ VL+ FF + E A Sbjct: 13 QDRPDLHDDDSAGLAVQEAKPALQAPPMYKVVLFNDDYTPMDFVVEVLEMFFNLNRELAT 72 Query: 92 CIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +ML VH +G CG++ +IAE K QV Y+R+ Q+PL C +E+ Sbjct: 73 KVMLAVHTEGRAVCGLFTRDIAETKAMQVNQYARESQHPLLCEIEK 118 >gi|238920382|ref|YP_002933897.1| hypothetical protein NT01EI_2492 [Edwardsiella ictaluri 93-146] gi|259491247|sp|C5BEA1|CLPS_EDWI9 RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|238869951|gb|ACR69662.1| conserved hypothetical protein [Edwardsiella ictaluri 93-146] Length = 106 Score = 155 bits (392), Expect = 2e-36, Method: Composition-based stats. Identities = 45/107 (42%), Positives = 64/107 (59%), Gaps = 2/107 (1%) Query: 31 RMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETA 90 N + + + R + V+ P LY V+L ND+YTPMEFVI VLQ FF D E A Sbjct: 1 MANLNDWLNLEPLAEDQTRRA--VKPPSLYSVILNNDDYTPMEFVIEVLQTFFAYDIERA 58 Query: 91 KCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +ML VH++G CGV+ E+AE KV + Y+R +++PL C +E+ Sbjct: 59 TQLMLTVHYKGKAVCGVFTAEVAETKVALINRYARDNEHPLLCTLEK 105 >gi|312961674|ref|ZP_07776172.1| ATP-dependent Clp protease adapter protein [Pseudomonas fluorescens WH6] gi|311283933|gb|EFQ62516.1| ATP-dependent Clp protease adapter protein [Pseudomonas fluorescens WH6] Length = 122 Score = 155 bits (392), Expect = 2e-36, Method: Composition-based stats. Identities = 43/120 (35%), Positives = 68/120 (56%), Gaps = 1/120 (0%) Query: 19 LALMSFIFMADSRMNKKGIAEFDNCLDSEVRF-SSKVRVPKLYRVLLVNDNYTPMEFVIH 77 + S I + ++ + D V+ ++ P +Y+V+L ND+YTPM+FV+ Sbjct: 1 MHAFSQIRLTFNQDRPDHEHDDDGSAGIAVKEAKPALQAPPMYKVVLFNDDYTPMDFVVE 60 Query: 78 VLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 VL+ FF + E A +ML VH +G CGV+ +IAE K QV Y+R+ Q+PL C +E+ Sbjct: 61 VLEVFFNLNRELATKVMLAVHTEGRAVCGVFTRDIAETKAMQVNQYARESQHPLLCEIEK 120 >gi|209695650|ref|YP_002263579.1| ATP-dependent Clp protease adaptor protein ClpS [Aliivibrio salmonicida LFI1238] gi|238066649|sp|B6EIX3|CLPS_ALISL RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|208009602|emb|CAQ79898.1| ATP-dependent Clp protease adaptor protein ClpS [Aliivibrio salmonicida LFI1238] Length = 106 Score = 155 bits (392), Expect = 2e-36, Method: Composition-based stats. Identities = 45/93 (48%), Positives = 61/93 (65%) Query: 45 DSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGE 104 D + ++ P +Y+V+L ND+YTPMEFV+ VL FF D E A +ML VH++G Sbjct: 13 DVLELEKTGLKPPPMYKVVLNNDDYTPMEFVVEVLDKFFSMDLEKATQLMLTVHYEGKAV 72 Query: 105 CGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 CGV+ E+AE KV QV YSR +++PL C MEQ Sbjct: 73 CGVFTAEVAETKVAQVNIYSRDNEHPLLCTMEQ 105 >gi|269139553|ref|YP_003296254.1| ATP-dependent Clp protease adaptor protein [Edwardsiella tarda EIB202] gi|267985214|gb|ACY85043.1| ATP-dependent Clp protease adaptor protein [Edwardsiella tarda EIB202] gi|304559441|gb|ADM42105.1| ATP-dependent Clp protease adaptor protein ClpS [Edwardsiella tarda FL6-60] Length = 106 Score = 155 bits (392), Expect = 2e-36, Method: Composition-based stats. Identities = 45/92 (48%), Positives = 60/92 (65%) Query: 46 SEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGEC 105 E R V+ P LY V+L ND+YTPMEFVI VLQ FF D E A +ML VH++G C Sbjct: 14 VEDRTRRAVKPPSLYSVILNNDDYTPMEFVIEVLQKFFAYDIERATQLMLTVHYKGKAVC 73 Query: 106 GVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 GV+ E+AE KV + Y+R +++PL C +E+ Sbjct: 74 GVFTAEVAETKVALINRYARDNEHPLLCTLEK 105 >gi|254428859|ref|ZP_05042566.1| ATP-dependent Clp protease adaptor protein ClpS [Alcanivorax sp. DG881] gi|196195028|gb|EDX89987.1| ATP-dependent Clp protease adaptor protein ClpS [Alcanivorax sp. DG881] Length = 94 Score = 155 bits (392), Expect = 2e-36, Method: Composition-based stats. Identities = 41/90 (45%), Positives = 62/90 (68%) Query: 48 VRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGV 107 K++ P +Y+VL++ND+YTPM+FV+ +L++FF E A +ML VH +G CGV Sbjct: 4 EEAKPKLKPPSMYKVLMLNDDYTPMDFVVEILEDFFNLGREQATRVMLTVHTEGKAVCGV 63 Query: 108 YAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 Y +IAE K QV+ Y+R++Q+PL C +EQ Sbjct: 64 YPQDIAETKATQVVEYARENQHPLMCQVEQ 93 >gi|308272838|emb|CBX29442.1| ATP-dependent Clp protease adapter protein clpS [uncultured Desulfobacterium sp.] Length = 105 Score = 155 bits (392), Expect = 2e-36, Method: Composition-based stats. Identities = 47/106 (44%), Positives = 66/106 (62%), Gaps = 2/106 (1%) Query: 32 MNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAK 91 M E + + SE R ++ P +++VLL ND+YT M+FV+ +L FYK E A Sbjct: 1 MGNNISPEIEESITSETRKE--IKEPSMFKVLLHNDDYTTMDFVVEILMRVFYKSIEEAI 58 Query: 92 CIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 IML VH QG+G CG+Y YEIAE K+N V + SR +PL+C +E+ Sbjct: 59 QIMLNVHRQGMGVCGLYTYEIAETKMNSVHSLSRDRGFPLRCSIEK 104 >gi|54293794|ref|YP_126209.1| hypothetical protein lpl0850 [Legionella pneumophila str. Lens] gi|148360536|ref|YP_001251743.1| ATP-dependent Clp protease adaptor protein [Legionella pneumophila str. Corby] gi|296106398|ref|YP_003618098.1| ATP-dependent Clp protease adaptor protein ClpS [Legionella pneumophila 2300/99 Alcoy] gi|67460217|sp|Q5WY89|CLPS_LEGPL RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|166214737|sp|A5IG97|CLPS_LEGPC RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|53753626|emb|CAH15084.1| hypothetical protein lpl0850 [Legionella pneumophila str. Lens] gi|148282309|gb|ABQ56397.1| ATP-dependent Clp protease adaptor protein [Legionella pneumophila str. Corby] gi|295648299|gb|ADG24146.1| ATP-dependent Clp protease adaptor protein ClpS [Legionella pneumophila 2300/99 Alcoy] gi|307609611|emb|CBW99113.1| hypothetical protein LPW_08981 [Legionella pneumophila 130b] Length = 111 Score = 155 bits (392), Expect = 2e-36, Method: Composition-based stats. Identities = 43/96 (44%), Positives = 65/96 (67%) Query: 43 CLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGI 102 + S+ ++ P+ Y+VLL+ND+YTPM+FV+ VL++FF+ + E A +ML+VH QG Sbjct: 16 DTELSTEISTAIKRPRKYKVLLLNDDYTPMDFVVEVLKHFFHLNEEVAIQVMLQVHFQGK 75 Query: 103 GECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 G CGV+ +IAE KV V Y+R +Q+PL ME + Sbjct: 76 GVCGVFTRDIAETKVALVNEYARMNQHPLLSSMEPE 111 >gi|254480629|ref|ZP_05093876.1| ATP-dependent Clp protease adaptor protein ClpS [marine gamma proteobacterium HTCC2148] gi|214039212|gb|EEB79872.1| ATP-dependent Clp protease adaptor protein ClpS [marine gamma proteobacterium HTCC2148] Length = 107 Score = 155 bits (392), Expect = 2e-36, Method: Composition-based stats. Identities = 40/88 (45%), Positives = 61/88 (69%) Query: 49 RFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVY 108 +++ P L++V+L+ND+YTPMEFV+ VL++FF + E A +ML VH QG G CG++ Sbjct: 16 ESKPELKKPPLFKVVLMNDDYTPMEFVVEVLESFFRMNREQATHVMLTVHTQGKGVCGIF 75 Query: 109 AYEIAEMKVNQVMNYSRQHQYPLQCIME 136 +IAE K QV Y+R+ ++PL C +E Sbjct: 76 TRDIAETKAAQVNQYARESEHPLLCEVE 103 >gi|319783684|ref|YP_004143160.1| ATP-dependent Clp protease adaptor protein ClpS [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317169572|gb|ADV13110.1| ATP-dependent Clp protease adaptor protein ClpS [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 122 Score = 155 bits (392), Expect = 2e-36, Method: Composition-based stats. Identities = 54/82 (65%), Positives = 71/82 (86%) Query: 57 PKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMK 116 P LYRVL++ND+YTPMEFV+HVL+ FF KD E A IML VH+ G+GECGVY +E+AE K Sbjct: 41 PSLYRVLILNDDYTPMEFVVHVLERFFQKDREAATRIMLHVHNHGVGECGVYTFEVAETK 100 Query: 117 VNQVMNYSRQHQYPLQCIMEQK 138 V+QVM+++RQ+Q+PLQC+ME+K Sbjct: 101 VSQVMDFARQNQHPLQCVMEKK 122 >gi|52841053|ref|YP_094852.1| ATP-dependent Clp protease adaptor protein ClpS [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|54296838|ref|YP_123207.1| ATP-dependent Clp protease adaptor protein ClpS [Legionella pneumophila str. Paris] gi|67460221|sp|Q5X6T6|CLPS_LEGPA RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|67460231|sp|Q5ZXB5|CLPS_LEGPH RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|52628164|gb|AAU26905.1| hypothetical protein lpg0817 [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|53750623|emb|CAH12030.1| hypothetical protein lpp0879 [Legionella pneumophila str. Paris] Length = 111 Score = 155 bits (392), Expect = 2e-36, Method: Composition-based stats. Identities = 43/96 (44%), Positives = 65/96 (67%) Query: 43 CLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGI 102 + S+ ++ P+ Y+VLL+ND+YTPM+FV+ VL++FF+ + E A +ML+VH QG Sbjct: 16 DTELSTEISTAIKRPRKYKVLLLNDDYTPMDFVVEVLKHFFHLNEEVAIQVMLQVHFQGK 75 Query: 103 GECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 G CGV+ +IAE KV V Y+R +Q+PL ME + Sbjct: 76 GVCGVFTRDIAETKVALVNEYARMNQHPLLSSMEPE 111 >gi|221134865|ref|ZP_03561168.1| ATP-dependent Clp protease adaptor protein ClpS [Glaciecola sp. HTCC2999] Length = 106 Score = 155 bits (392), Expect = 2e-36, Method: Composition-based stats. Identities = 51/106 (48%), Positives = 66/106 (62%), Gaps = 1/106 (0%) Query: 32 MNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAK 91 M+K+ + D KV+ P +Y+V+L ND+YTPMEFV+ VL FF D E A Sbjct: 1 MSKENTSTIDEH-KINESVEKKVQPPSMYKVILNNDDYTPMEFVVEVLCRFFNMDGEKAN 59 Query: 92 CIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +ML VH+QG CGVY EIAE KV QV Y+++HQ+PL C EQ Sbjct: 60 QVMLTVHYQGKAVCGVYTAEIAETKVMQVNQYAQKHQHPLLCSYEQ 105 >gi|67460273|sp|Q6FZM5|CLPS_BARQU RecName: Full=ATP-dependent Clp protease adapter protein ClpS Length = 110 Score = 155 bits (392), Expect = 2e-36, Method: Composition-based stats. Identities = 55/107 (51%), Positives = 72/107 (67%) Query: 32 MNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAK 91 K E + + SK++ PKLYRV L ND+YTPM+FV+ VL+NFF K E A Sbjct: 4 EKGKNWDESRHDAVIIPKMRSKLQKPKLYRVFLFNDDYTPMDFVVFVLKNFFKKSFEEAT 63 Query: 92 CIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 IML VH G+GECG+Y+YE+AEMKV QV + Q+++PLQC+ME K Sbjct: 64 HIMLNVHQNGVGECGIYSYEVAEMKVIQVRECAHQNEHPLQCVMEWK 110 >gi|325282898|ref|YP_004255439.1| ATP-dependent Clp protease adapter protein clpS [Deinococcus proteolyticus MRP] gi|324314707|gb|ADY25822.1| ATP-dependent Clp protease adapter protein clpS [Deinococcus proteolyticus MRP] Length = 109 Score = 155 bits (392), Expect = 2e-36, Method: Composition-based stats. Identities = 45/101 (44%), Positives = 66/101 (65%) Query: 38 AEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKV 97 + D ++ ++ R P+L+RVLL+ND+YTPM+FV+ VL+ +F K + A+ IML V Sbjct: 4 PDTDRAGHTQTLERTETRKPRLWRVLLLNDDYTPMDFVVLVLERYFRKTEQDAELIMLAV 63 Query: 98 HHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 HH+G G GVY +IAE KV QV +RQ YPL+ + E + Sbjct: 64 HHKGQGVAGVYTRDIAETKVAQVTQLARQEGYPLRVLAEPE 104 >gi|49474301|ref|YP_032343.1| hypothetical protein BQ07060 [Bartonella quintana str. Toulouse] gi|49239805|emb|CAF26195.1| hypothetical protein BQ07060 [Bartonella quintana str. Toulouse] Length = 123 Score = 154 bits (391), Expect = 2e-36, Method: Composition-based stats. Identities = 55/107 (51%), Positives = 72/107 (67%) Query: 32 MNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAK 91 K E + + SK++ PKLYRV L ND+YTPM+FV+ VL+NFF K E A Sbjct: 17 EKGKNWDESRHDAVIIPKMRSKLQKPKLYRVFLFNDDYTPMDFVVFVLKNFFKKSFEEAT 76 Query: 92 CIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 IML VH G+GECG+Y+YE+AEMKV QV + Q+++PLQC+ME K Sbjct: 77 HIMLNVHQNGVGECGIYSYEVAEMKVIQVRECAHQNEHPLQCVMEWK 123 >gi|186475335|ref|YP_001856805.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia phymatum STM815] gi|238691266|sp|B2JDY3|CLPS_BURP8 RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|184191794|gb|ACC69759.1| ATP-dependent Clp protease adaptor protein ClpS [Burkholderia phymatum STM815] Length = 104 Score = 154 bits (391), Expect = 2e-36, Method: Composition-based stats. Identities = 46/90 (51%), Positives = 67/90 (74%) Query: 48 VRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGV 107 R K++ P +++V+L+ND++TPMEFV+ ++Q +F KD ETA IMLKVH +G G CGV Sbjct: 14 ERQEQKLKPPAMFKVVLLNDDFTPMEFVVMIVQEYFNKDRETATQIMLKVHREGRGVCGV 73 Query: 108 YAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 Y +IA KV QV+ ++RQ +PLQC+ME+ Sbjct: 74 YTRDIASTKVEQVVTHARQAGHPLQCVMEE 103 >gi|229591241|ref|YP_002873360.1| ATP-dependent Clp protease adaptor protein ClpS [Pseudomonas fluorescens SBW25] gi|259491249|sp|C3JY63|CLPS_PSEFS RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|229363107|emb|CAY50115.1| ATP-dependent clp protease adaptor protein [Pseudomonas fluorescens SBW25] Length = 122 Score = 154 bits (391), Expect = 2e-36, Method: Composition-based stats. Identities = 43/120 (35%), Positives = 69/120 (57%), Gaps = 1/120 (0%) Query: 19 LALMSFIFMADSRMNKKGIAEFDNCLDSEVRF-SSKVRVPKLYRVLLVNDNYTPMEFVIH 77 + +S I + ++ + D V+ ++ P +Y+V+L ND+YTPM+FV+ Sbjct: 1 MHAISQIRLTFNQDRPDHEHDDDGSAGIAVQEAKPALQAPPMYKVVLFNDDYTPMDFVVE 60 Query: 78 VLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 VL+ FF + E A +ML VH +G CGV+ +IAE K QV Y+R+ Q+PL C +E+ Sbjct: 61 VLEVFFNLNRELATKVMLAVHTEGRAVCGVFTRDIAETKAMQVNQYARESQHPLLCEIEK 120 >gi|59712373|ref|YP_205149.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio fischeri ES114] gi|197335290|ref|YP_002156588.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio fischeri MJ11] gi|67460142|sp|Q5E3Y5|CLPS_VIBF1 RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|238690298|sp|B5FG65|CLPS_VIBFM RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|59480474|gb|AAW86261.1| specificity factor for ClpA-ClpP chaperone-protease complex [Vibrio fischeri ES114] gi|197316780|gb|ACH66227.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio fischeri MJ11] Length = 106 Score = 154 bits (391), Expect = 2e-36, Method: Composition-based stats. Identities = 45/93 (48%), Positives = 62/93 (66%) Query: 45 DSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGE 104 D + +++R P +Y+V+L ND+YTPMEFV+ VL FF D E A +ML VH++G Sbjct: 13 DVLEQEKTELRPPSMYKVVLNNDDYTPMEFVVEVLDKFFSMDLEKATQLMLTVHYEGKAV 72 Query: 105 CGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 CG + E+AE KV QV YSR +++PL C MEQ Sbjct: 73 CGTFTAEVAETKVAQVNTYSRDNEHPLLCTMEQ 105 >gi|260550322|ref|ZP_05824534.1| substrate modulator for ClpAP [Acinetobacter sp. RUH2624] gi|260406634|gb|EEX00115.1| substrate modulator for ClpAP [Acinetobacter sp. RUH2624] Length = 137 Score = 154 bits (391), Expect = 2e-36, Method: Composition-based stats. Identities = 42/110 (38%), Positives = 67/110 (60%), Gaps = 1/110 (0%) Query: 29 DSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHE 88 + R++ + D + + +++ P LY V+L+ND+YTPM+FVI +LQ +F + + Sbjct: 28 NPRLSDSQNEDHDGEIVVQT-APPELKRPPLYAVVLLNDDYTPMDFVIEILQQYFAMNLD 86 Query: 89 TAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 A +ML VH++G G GVY +IAE K N V NY+R +PL C ++ K Sbjct: 87 QATQVMLTVHYEGKGTAGVYPRDIAETKANLVNNYARSQGHPLLCQIKPK 136 >gi|163856974|ref|YP_001631272.1| ATP-dependent Clp protease adaptor protein ClpS [Bordetella petrii DSM 12804] gi|229889825|sp|A9IQ03|CLPS_BORPD RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|163260702|emb|CAP43004.1| hypothetical protein Bpet2662 [Bordetella petrii] Length = 104 Score = 154 bits (391), Expect = 3e-36, Method: Composition-based stats. Identities = 48/101 (47%), Positives = 67/101 (66%), Gaps = 1/101 (0%) Query: 38 AEFDNCLDSEVRFSS-KVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLK 96 + D D V + + P +Y+V+L+ND+YTPMEFV+ VLQ FF K+ E A IML+ Sbjct: 3 STLDTQHDVAVEKAPARTAPPPMYQVVLLNDDYTPMEFVVKVLQKFFGKNQEDATRIMLQ 62 Query: 97 VHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 VHH+G G CGVY ++A ++ QV Y+R Q+PLQC+ME Sbjct: 63 VHHEGRGTCGVYPRDVAATRIAQVAQYARARQHPLQCVMEP 103 >gi|291295834|ref|YP_003507232.1| ATP-dependent Clp protease adaptor protein ClpS [Meiothermus ruber DSM 1279] gi|290470793|gb|ADD28212.1| ATP-dependent Clp protease adaptor protein ClpS [Meiothermus ruber DSM 1279] Length = 98 Score = 154 bits (391), Expect = 3e-36, Method: Composition-based stats. Identities = 47/93 (50%), Positives = 62/93 (66%) Query: 46 SEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGEC 105 ++ R + R P Y+VLL+ND+YTPM+FV+ VL +F K A IML+VHH G+G Sbjct: 6 TKTRSQTATRTPPRYKVLLLNDDYTPMDFVVEVLMRYFKKSKLEATRIMLQVHHAGVGVA 65 Query: 106 GVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 GVY +EIAE KVNQVM + +PLQC ME + Sbjct: 66 GVYPFEIAETKVNQVMAAASAEGHPLQCTMEPE 98 >gi|88812888|ref|ZP_01128132.1| ATP-dependent Clp protease adaptor protein ClpS [Nitrococcus mobilis Nb-231] gi|88789810|gb|EAR20933.1| ATP-dependent Clp protease adaptor protein ClpS [Nitrococcus mobilis Nb-231] Length = 106 Score = 154 bits (391), Expect = 3e-36, Method: Composition-based stats. Identities = 47/106 (44%), Positives = 68/106 (64%), Gaps = 1/106 (0%) Query: 32 MNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAK 91 M++ + L + + +V+ P LYRV+L+ND+YTPMEFV+ VLQ FF+ D A Sbjct: 1 MSRDKAPRREGDLSVK-QAEPQVKRPPLYRVVLLNDDYTPMEFVVEVLQIFFHMDRGKAT 59 Query: 92 CIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 IML VH +G G CGVY ++AE KV+ V ++R++ +PL C ME Sbjct: 60 QIMLHVHTRGKGVCGVYNRDVAETKVDLVNEHARKNDHPLMCTMEP 105 >gi|253990327|ref|YP_003041683.1| ATP-dependent Clp protease adaptor protein ClpS [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253781777|emb|CAQ84940.1| atp-dependent clp protease adaptor protein clps [Photorhabdus asymbiotica] Length = 106 Score = 154 bits (391), Expect = 3e-36, Method: Composition-based stats. Identities = 47/105 (44%), Positives = 68/105 (64%), Gaps = 4/105 (3%) Query: 37 IAEFDNCLDSEVRFSS----KVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKC 92 ++E+ N L ++ K++ P +Y+V+L ND+YTPMEFV+ VL+ FF D E A Sbjct: 1 MSEYHNSLKNKESVKDERQHKLQPPSMYQVILNNDDYTPMEFVVDVLRKFFSYDVERATQ 60 Query: 93 IMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +ML VH+QG CGVY E+AE K QV Y+R+ Q+PL C +E+ Sbjct: 61 LMLDVHYQGKAVCGVYTAEVAETKAAQVNMYAREQQHPLLCTLEK 105 >gi|28198572|ref|NP_778886.1| ATP-dependent Clp protease adaptor protein ClpS [Xylella fastidiosa Temecula1] gi|71274782|ref|ZP_00651070.1| ATP-dependent Clp protease adaptor protein ClpS [Xylella fastidiosa Dixon] gi|71897611|ref|ZP_00679856.1| ATP-dependent Clp protease adaptor protein ClpS [Xylella fastidiosa Ann-1] gi|71901078|ref|ZP_00683187.1| ATP-dependent Clp protease adaptor protein ClpS [Xylella fastidiosa Ann-1] gi|170729972|ref|YP_001775405.1| ATP-dependent Clp protease adaptor protein ClpS [Xylella fastidiosa M12] gi|182681253|ref|YP_001829413.1| ATP-dependent Clp protease adaptor protein ClpS [Xylella fastidiosa M23] gi|32130316|sp|Q87DL8|CLPS_XYLFT RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|238687979|sp|B0U6Q9|CLPS_XYLFM RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|238691117|sp|B2I9Y0|CLPS_XYLF2 RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|28056656|gb|AAO28535.1| conserved hypothetical protein [Xylella fastidiosa Temecula1] gi|71164514|gb|EAO14228.1| ATP-dependent Clp protease adaptor protein ClpS [Xylella fastidiosa Dixon] gi|71729160|gb|EAO31282.1| ATP-dependent Clp protease adaptor protein ClpS [Xylella fastidiosa Ann-1] gi|71732514|gb|EAO34567.1| ATP-dependent Clp protease adaptor protein ClpS [Xylella fastidiosa Ann-1] gi|167964765|gb|ACA11775.1| conserved hypothetical protein [Xylella fastidiosa M12] gi|182631363|gb|ACB92139.1| ATP-dependent Clp protease adaptor protein ClpS [Xylella fastidiosa M23] gi|307579703|gb|ADN63672.1| ATP-dependent Clp protease adaptor protein ClpS [Xylella fastidiosa subsp. fastidiosa GB514] Length = 106 Score = 154 bits (390), Expect = 3e-36, Method: Composition-based stats. Identities = 54/106 (50%), Positives = 71/106 (66%), Gaps = 1/106 (0%) Query: 32 MNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAK 91 M++K + + DN L E ++KV P Y+VLL+ND+YTPM+FVI VLQ FF D + A Sbjct: 1 MSQKTVHDQDNALLLETG-NTKVAPPPRYQVLLLNDDYTPMDFVIVVLQQFFAMDLKKAT 59 Query: 92 CIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +ML VH +G G CG Y E+AE KV QV +SR HQ+PL C M+Q Sbjct: 60 QVMLHVHTRGRGVCGFYTREVAESKVAQVNEFSRIHQHPLLCTMKQ 105 >gi|237800558|ref|ZP_04589019.1| ATP-dependent Clp protease adaptor protein ClpS [Pseudomonas syringae pv. oryzae str. 1_6] gi|330958173|gb|EGH58433.1| ATP-dependent Clp protease adaptor protein ClpS [Pseudomonas syringae pv. maculicola str. ES4326] gi|331023418|gb|EGI03475.1| ATP-dependent Clp protease adaptor protein ClpS [Pseudomonas syringae pv. oryzae str. 1_6] Length = 120 Score = 154 bits (390), Expect = 3e-36, Method: Composition-based stats. Identities = 40/106 (37%), Positives = 63/106 (59%) Query: 32 MNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAK 91 + E D+ + ++ P +Y+V+L ND+YTPM+FV+ VL+ FF + E A Sbjct: 13 QDGPQSHEDDSAGIAVQDAKPTLQAPPMYKVVLFNDDYTPMDFVVEVLEVFFNLNRELAT 72 Query: 92 CIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +ML VH +G CG++ +IAE K QV Y+R+ Q+PL C +E+ Sbjct: 73 KVMLAVHTEGRAVCGLFTRDIAETKAMQVNQYARESQHPLLCEIEK 118 >gi|240850299|ref|YP_002971692.1| ATP-dependent Clp protease adaptor protein ClpS [Bartonella grahamii as4aup] gi|240267422|gb|ACS51010.1| ATP-dependent Clp protease adaptor protein ClpS [Bartonella grahamii as4aup] Length = 110 Score = 154 bits (390), Expect = 3e-36, Method: Composition-based stats. Identities = 55/107 (51%), Positives = 71/107 (66%) Query: 32 MNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAK 91 K E + + +K+ PKL RV L+ND+YTPM+FV+ VL+NFF K E A Sbjct: 4 EKGKNWDEVRHGAVIMPKARAKLEKPKLCRVFLLNDDYTPMDFVVFVLKNFFKKSFEEAT 63 Query: 92 CIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 IML VHH GIGECG Y YE+AEMK+ QV +RQ+++PLQC+ME K Sbjct: 64 RIMLNVHHSGIGECGTYTYEVAEMKILQVRECARQNEHPLQCVMEWK 110 >gi|114332013|ref|YP_748235.1| ATP-dependent Clp protease adaptor protein ClpS [Nitrosomonas eutropha C91] gi|122313284|sp|Q0AEG2|CLPS_NITEC RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|114309027|gb|ABI60270.1| ATP-dependent Clp protease adaptor protein ClpS [Nitrosomonas eutropha C91] Length = 103 Score = 154 bits (390), Expect = 3e-36, Method: Composition-based stats. Identities = 45/101 (44%), Positives = 69/101 (68%) Query: 38 AEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKV 97 A N + +++ P LY+V+L+ND++TPM+FV+ VL++FF+ D E A IMLK+ Sbjct: 3 ANNRNPESVIEKGKTRLTPPPLYKVILINDDFTPMDFVVKVLRHFFFMDEEMATRIMLKI 62 Query: 98 HHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 H +G G CG Y +IA KV QV +S+Q+Q+PL C+ME++ Sbjct: 63 HTEGAGICGTYPGDIAATKVQQVNEFSKQNQHPLMCVMEKE 103 >gi|330900612|gb|EGH32031.1| ATP-dependent Clp protease adaptor protein ClpS [Pseudomonas syringae pv. japonica str. M301072PT] gi|330940301|gb|EGH43421.1| ATP-dependent Clp protease adaptor protein ClpS [Pseudomonas syringae pv. pisi str. 1704B] gi|330981384|gb|EGH79487.1| ATP-dependent Clp protease adaptor protein ClpS [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 120 Score = 154 bits (390), Expect = 3e-36, Method: Composition-based stats. Identities = 40/106 (37%), Positives = 63/106 (59%) Query: 32 MNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAK 91 + E D+ + ++ P +Y+V+L ND+YTPM+FV+ VL+ FF + E A Sbjct: 13 QDDPQSHEDDSAGIAVQDAKPALQAPPMYKVVLFNDDYTPMDFVVEVLEVFFNLNRELAT 72 Query: 92 CIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +ML VH +G CG++ +IAE K QV Y+R+ Q+PL C +E+ Sbjct: 73 KVMLAVHTEGRAVCGLFTRDIAETKAMQVNQYARESQHPLLCEIEK 118 >gi|37680507|ref|NP_935116.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio vulnificus YJ016] gi|320155836|ref|YP_004188215.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio vulnificus MO6-24/O] gi|326423943|ref|NP_760980.2| ATP-dependent Clp protease adaptor protein ClpS [Vibrio vulnificus CMCP6] gi|39930932|sp|Q7MJ40|CLPS_VIBVY RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|37199255|dbj|BAC95087.1| conserved hypothetical protein [Vibrio vulnificus YJ016] gi|319931148|gb|ADV86012.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio vulnificus MO6-24/O] gi|319999322|gb|AAO10507.2| ATP-dependent Clp protease adaptor protein clpS [Vibrio vulnificus CMCP6] Length = 106 Score = 154 bits (390), Expect = 3e-36, Method: Composition-based stats. Identities = 48/93 (51%), Positives = 65/93 (69%) Query: 45 DSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGE 104 D + ++++ PK Y V+L ND+YTPM+FVI VL+ FF D + A IMLKVH++G Sbjct: 13 DLLEKEITQIQPPKKYNVVLNNDDYTPMDFVIDVLERFFSHDLDKATQIMLKVHYEGKAI 72 Query: 105 CGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 CG Y+ EIAE KV QV YSR++++PL C MEQ Sbjct: 73 CGTYSAEIAETKVAQVTMYSRENEHPLLCTMEQ 105 >gi|66046413|ref|YP_236254.1| ATP-dependent Clp protease adaptor protein ClpS [Pseudomonas syringae pv. syringae B728a] gi|302185010|ref|ZP_07261683.1| ATP-dependent Clp protease adaptor protein ClpS [Pseudomonas syringae pv. syringae 642] gi|75501532|sp|Q4ZRK6|CLPS_PSEU2 RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|63257120|gb|AAY38216.1| ATP-dependent Clp protease adaptor protein ClpS [Pseudomonas syringae pv. syringae B728a] gi|330972894|gb|EGH72960.1| ATP-dependent Clp protease adaptor protein ClpS [Pseudomonas syringae pv. aceris str. M302273PT] Length = 120 Score = 154 bits (390), Expect = 4e-36, Method: Composition-based stats. Identities = 40/106 (37%), Positives = 63/106 (59%) Query: 32 MNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAK 91 + E D+ + ++ P +Y+V+L ND+YTPM+FV+ VL+ FF + E A Sbjct: 13 QDDPQSHEDDSAGIAVQDAKPTLQAPPMYKVVLFNDDYTPMDFVVEVLEVFFNLNRELAT 72 Query: 92 CIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +ML VH +G CG++ +IAE K QV Y+R+ Q+PL C +E+ Sbjct: 73 KVMLAVHTEGRAVCGLFTRDIAETKAMQVNQYARESQHPLLCEIEK 118 >gi|229525754|ref|ZP_04415159.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio cholerae bv. albensis VL426] gi|229339335|gb|EEO04352.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio cholerae bv. albensis VL426] Length = 106 Score = 154 bits (390), Expect = 4e-36, Method: Composition-based stats. Identities = 45/95 (47%), Positives = 63/95 (66%) Query: 43 CLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGI 102 D + + V+ P +Y V+L ND+YTPM+FVI +L+ FF D E A +MLKVH++G Sbjct: 11 DFDLLEKEKTAVKPPSMYHVVLNNDDYTPMDFVIEILERFFSMDIERATQVMLKVHYEGK 70 Query: 103 GECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 CG + E+AE KV QV YSR++++PL C MEQ Sbjct: 71 AICGTFTAEVAETKVAQVTRYSRENEHPLLCTMEQ 105 >gi|15838043|ref|NP_298731.1| ATP-dependent Clp protease adaptor protein ClpS [Xylella fastidiosa 9a5c] gi|12230825|sp|Q9PDD7|CLPS_XYLFA RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|9106460|gb|AAF84251.1|AE003974_6 conserved hypothetical protein [Xylella fastidiosa 9a5c] Length = 106 Score = 154 bits (390), Expect = 4e-36, Method: Composition-based stats. Identities = 54/106 (50%), Positives = 71/106 (66%), Gaps = 1/106 (0%) Query: 32 MNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAK 91 M++K + + DN L E ++KV P Y+VLL+ND+YTPM+FVI VLQ FF D + A Sbjct: 1 MSQKTVHDQDNALLLETG-NTKVAPPPRYQVLLLNDDYTPMDFVIVVLQQFFAMDLKKAT 59 Query: 92 CIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +ML VH +G G CG Y E+AE KV QV +SR HQ+PL C M+Q Sbjct: 60 QVMLHVHTRGCGVCGFYTREVAESKVAQVNEFSRIHQHPLLCTMKQ 105 >gi|37525540|ref|NP_928884.1| ATP-dependent Clp protease adaptor protein ClpS [Photorhabdus luminescens subsp. laumondii TTO1] gi|39930943|sp|Q7N6F7|CLPS_PHOLL RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|36784968|emb|CAE13886.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii TTO1] Length = 106 Score = 154 bits (389), Expect = 4e-36, Method: Composition-based stats. Identities = 46/105 (43%), Positives = 67/105 (63%), Gaps = 4/105 (3%) Query: 37 IAEFDNCLDSEVRFS----SKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKC 92 + E+ N L S+ K++ P +Y+V+L ND+YTPMEFV+ VL+ FF D E A Sbjct: 1 MNEYHNSLKSKESVKDERQQKLQPPSMYQVILNNDDYTPMEFVVDVLRKFFSYDIERATQ 60 Query: 93 IMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +ML VH+QG CGVY E+AE K QV Y++++ +PL C +E+ Sbjct: 61 LMLDVHYQGKAVCGVYTAEVAETKAAQVNMYAKEYGHPLLCTLEK 105 >gi|121594198|ref|YP_986094.1| ATP-dependent Clp protease adaptor protein ClpS [Acidovorax sp. JS42] gi|120606278|gb|ABM42018.1| ATP-dependent Clp protease adaptor protein ClpS [Acidovorax sp. JS42] Length = 135 Score = 154 bits (389), Expect = 4e-36, Method: Composition-based stats. Identities = 44/90 (48%), Positives = 63/90 (70%) Query: 48 VRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGV 107 R + K + P++Y+V+++ND+YTPMEFV+ VLQ FF KD E A IMLK+H G G CGV Sbjct: 44 ERRTQKTQPPQMYQVVMLNDDYTPMEFVVVVLQEFFNKDREAATQIMLKIHLDGKGVCGV 103 Query: 108 YAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 Y ++A KV+QV+ + + +PLQC+ E Sbjct: 104 YTRDVAATKVDQVLEAAHKAGHPLQCLSEP 133 >gi|161897896|ref|YP_433586.2| ATP-dependent Clp protease adaptor protein ClpS [Hahella chejuensis KCTC 2396] Length = 126 Score = 154 bits (389), Expect = 4e-36, Method: Composition-based stats. Identities = 39/110 (35%), Positives = 63/110 (57%), Gaps = 1/110 (0%) Query: 29 DSRMNKKGIAEFDNCLDSEVR-FSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDH 87 + + +G + D+ + ++ P +Y+V+++ND+YTPM+FV+ VL FF Sbjct: 15 NDGLEDEGNQDGDHPGSLALAPEKPALKRPSMYQVVMLNDDYTPMDFVVEVLIRFFNMSE 74 Query: 88 ETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 A +ML VH QG CGV+ +IAE K QV YS + ++PL C +E+ Sbjct: 75 PKATQVMLAVHTQGRAVCGVFTRDIAESKAAQVNQYSSECEHPLLCEIER 124 >gi|190574283|ref|YP_001972128.1| putative ATP-dependent Clp protease adaptor protein ClpS [Stenotrophomonas maltophilia K279a] gi|229889824|sp|B2FQX5|CLPS_STRMK RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|190012205|emb|CAQ45828.1| putative ATP-dependent Clp protease adaptor protein ClpS [Stenotrophomonas maltophilia K279a] Length = 108 Score = 154 bits (389), Expect = 4e-36, Method: Composition-based stats. Identities = 47/107 (43%), Positives = 65/107 (60%), Gaps = 1/107 (0%) Query: 32 MNKKGIAEFDNCLDSEVRF-SSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETA 90 M + + + V +V P Y+V+L+ND+YTPM+FV+ VLQ FF D + A Sbjct: 1 MPHESSPDSQHEHGVAVEAARPEVAPPPFYQVMLLNDDYTPMDFVVDVLQQFFSMDLDKA 60 Query: 91 KCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +ML VH +G G CGV+ E+AE KV QV YSR +Q+PL C ME+ Sbjct: 61 TQVMLHVHTRGRGVCGVFTREVAETKVAQVNEYSRMNQHPLLCTMEK 107 >gi|183598326|ref|ZP_02959819.1| hypothetical protein PROSTU_01717 [Providencia stuartii ATCC 25827] gi|188020501|gb|EDU58541.1| hypothetical protein PROSTU_01717 [Providencia stuartii ATCC 25827] Length = 106 Score = 154 bits (389), Expect = 4e-36, Method: Composition-based stats. Identities = 47/102 (46%), Positives = 66/102 (64%), Gaps = 2/102 (1%) Query: 36 GIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIML 95 G + D EV ++ P +Y+V+L ND+YTPM+FV+ VLQ +F D E A IML Sbjct: 6 GTFKTDVVFKDEV--EQVLQPPSMYKVILNNDDYTPMDFVVEVLQKYFSFDEERATQIML 63 Query: 96 KVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 VH QG G CG++ E+AE K QV +Y+R+H+YPL C +E+ Sbjct: 64 DVHFQGKGVCGIFTAEVAETKAAQVNSYAREHEYPLLCTIEK 105 >gi|33301910|sp|Q8DAS0|CLPS_VIBVU RecName: Full=ATP-dependent Clp protease adapter protein ClpS Length = 106 Score = 154 bits (389), Expect = 4e-36, Method: Composition-based stats. Identities = 48/93 (51%), Positives = 64/93 (68%) Query: 45 DSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGE 104 D + ++++ PK Y V+L ND+YTPM+FVI VL+ FF D A IMLKVH++G Sbjct: 13 DLLEKEITQIQPPKKYNVVLNNDDYTPMDFVIDVLERFFSHDLNKATQIMLKVHYEGKAI 72 Query: 105 CGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 CG Y+ EIAE KV QV YSR++++PL C MEQ Sbjct: 73 CGTYSAEIAETKVAQVTMYSRENEHPLLCTMEQ 105 >gi|30249694|ref|NP_841764.1| hypothetical protein NE1732 [Nitrosomonas europaea ATCC 19718] gi|37076996|sp|Q82TY3|CLPS_NITEU RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|30180731|emb|CAD85643.1| DUF174 [Nitrosomonas europaea ATCC 19718] Length = 103 Score = 154 bits (389), Expect = 4e-36, Method: Composition-based stats. Identities = 44/101 (43%), Positives = 72/101 (71%) Query: 38 AEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKV 97 A++ N + +++ P LY+V+L+ND++TPM+FV+ VL++FF + E A +MLK+ Sbjct: 3 ADYRNPESIIEKGRARLNPPPLYKVILINDDFTPMDFVVKVLRHFFLMNEEMATKVMLKI 62 Query: 98 HHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 H +G G CG+Y +IA KV QV ++SRQ+Q+PL C+ME++ Sbjct: 63 HIEGAGICGIYPSDIAVTKVQQVNDFSRQNQHPLMCVMEKE 103 >gi|77459813|ref|YP_349320.1| ATP-dependent Clp protease adaptor protein ClpS [Pseudomonas fluorescens Pf0-1] gi|77383816|gb|ABA75329.1| ATP-dependent clp protease adaptor protein [Pseudomonas fluorescens Pf0-1] Length = 127 Score = 154 bits (389), Expect = 5e-36, Method: Composition-based stats. Identities = 40/107 (37%), Positives = 64/107 (59%) Query: 31 RMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETA 90 + + + D+ + ++ P +Y+V+L ND+YTPM+FV+ VL+ FF + E A Sbjct: 19 QKDLPQEHDDDSAGVAVQEAKPALQAPPMYKVVLFNDDYTPMDFVVEVLEVFFNLNRELA 78 Query: 91 KCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +ML VH +G CGV+ +IAE K QV Y+R+ Q+PL C +E+ Sbjct: 79 TKVMLAVHTEGRAVCGVFTRDIAETKAMQVNQYARESQHPLLCEIEK 125 >gi|268590195|ref|ZP_06124416.1| ATP-dependent Clp protease adaptor protein ClpS [Providencia rettgeri DSM 1131] gi|291314476|gb|EFE54929.1| ATP-dependent Clp protease adaptor protein ClpS [Providencia rettgeri DSM 1131] Length = 106 Score = 154 bits (389), Expect = 5e-36, Method: Composition-based stats. Identities = 46/105 (43%), Positives = 68/105 (64%), Gaps = 4/105 (3%) Query: 37 IAEFDNCLDSEVRFSSKVR----VPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKC 92 +++F ++V F ++ P +Y+VLL ND+YTPM+FV+ VLQ +F D E A Sbjct: 1 MSDFLGTFKTDVIFKDEIEQTLQPPSMYKVLLNNDDYTPMDFVVEVLQKYFSFDEERATQ 60 Query: 93 IMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 IML VH QG G CG++ E+AE K QV ++R+H+YPL C +E+ Sbjct: 61 IMLDVHIQGKGVCGIFTAEVAETKAAQVNTFAREHEYPLLCTIEK 105 >gi|119897424|ref|YP_932637.1| ATP-dependent Clp protease adaptor protein ClpS [Azoarcus sp. BH72] gi|166214724|sp|A1K4J5|CLPS_AZOSB RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|119669837|emb|CAL93750.1| ClpS protein [Azoarcus sp. BH72] Length = 102 Score = 154 bits (389), Expect = 5e-36, Method: Composition-based stats. Identities = 46/87 (52%), Positives = 67/87 (77%) Query: 51 SSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAY 110 ++ R P LY+VLL+ND++TPM+FVI VLQ +F D E A +ML+VH +G+G CGV+ Sbjct: 15 RTRTRPPPLYKVLLLNDDFTPMDFVIVVLQKYFSMDRERATRVMLQVHREGMGVCGVFPR 74 Query: 111 EIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +IA KV QV++++RQHQ+PL C+ME+ Sbjct: 75 DIASTKVEQVVSFARQHQHPLACVMEE 101 >gi|90408367|ref|ZP_01216530.1| ATP-dependent Clp protease adaptor protein ClpS [Psychromonas sp. CNPT3] gi|90310530|gb|EAS38652.1| ATP-dependent Clp protease adaptor protein ClpS [Psychromonas sp. CNPT3] Length = 108 Score = 154 bits (389), Expect = 5e-36, Method: Composition-based stats. Identities = 48/106 (45%), Positives = 70/106 (66%) Query: 32 MNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAK 91 M+ K + N + +K++ P +Y VLL ND+YTPM+FVI VLQ FF + A Sbjct: 1 MSDKNSVQTGNSPAVLDKLETKLQPPAMYNVLLHNDDYTPMDFVIDVLQRFFQLSTDKAT 60 Query: 92 CIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 IML VH+ IG CG ++ EIAE KV QVMNY++++++PL+C M++ Sbjct: 61 QIMLDVHYHDIGICGTFSAEIAETKVMQVMNYAQENEHPLRCSMQK 106 >gi|113869007|ref|YP_727496.1| ATP-dependent Clp protease adaptor protein ClpS [Ralstonia eutropha H16] gi|194290613|ref|YP_002006520.1| ATP-dependent clp protease adaptor protein clps [Cupriavidus taiwanensis LMG 19424] gi|123133653|sp|Q0K793|CLPS_RALEH RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|238692769|sp|B3R6C0|CLPS_CUPTR RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|113527783|emb|CAJ94128.1| ATP-dependent Clp protease adaptor protein [Ralstonia eutropha H16] gi|193224448|emb|CAQ70459.1| ATP-dependent Clp protease substrate specificity regulator [Cupriavidus taiwanensis LMG 19424] Length = 108 Score = 153 bits (388), Expect = 5e-36, Method: Composition-based stats. Identities = 43/90 (47%), Positives = 63/90 (70%) Query: 48 VRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGV 107 R ++ P +++V+L+ND+YTPMEFV+ +LQ +F +D ETA IML VH +G G CG+ Sbjct: 18 ERKEQALKPPAMFKVVLLNDDYTPMEFVVMILQQYFSRDRETATQIMLTVHREGKGVCGI 77 Query: 108 YAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 Y +IA KV V ++RQ +PLQC+ME+ Sbjct: 78 YTRDIAATKVELVSTHARQAGHPLQCVMEE 107 >gi|90579120|ref|ZP_01234930.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio angustum S14] gi|90439953|gb|EAS65134.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio angustum S14] Length = 106 Score = 153 bits (388), Expect = 5e-36, Method: Composition-based stats. Identities = 46/93 (49%), Positives = 64/93 (68%) Query: 45 DSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGE 104 D + +V+ P +Y+V+L ND+YTPM+FVI VLQ FF D E A +ML VH++G Sbjct: 13 DILEKEEIQVKPPSMYKVILNNDDYTPMDFVIEVLQTFFSMDLEKAAQLMLAVHYEGKAI 72 Query: 105 CGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 CG + E+AE KV QVM Y+R+H++PL C ME+ Sbjct: 73 CGTFTAEVAETKVAQVMMYAREHEHPLLCTMEK 105 >gi|118594453|ref|ZP_01551800.1| ATP-dependent Clp protease adaptor protein ClpS [Methylophilales bacterium HTCC2181] gi|118440231|gb|EAV46858.1| ATP-dependent Clp protease adaptor protein ClpS [Methylophilales bacterium HTCC2181] Length = 103 Score = 153 bits (388), Expect = 5e-36, Method: Composition-based stats. Identities = 47/102 (46%), Positives = 75/102 (73%), Gaps = 1/102 (0%) Query: 37 IAEFDNCLDSEVRF-SSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIML 95 ++E ++ D + +K ++P LY+V+++ND+YTPMEFV+ +Q F K H+ A IML Sbjct: 1 MSEINHSDDVKTSPNRTKPKLPSLYKVIILNDDYTPMEFVVFSIQKVFQKSHDEATRIML 60 Query: 96 KVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 K+H +GIG CG++ EIAE K+ QV+N +++HQ+PLQCI+E+ Sbjct: 61 KIHTEGIGVCGMFPLEIAETKMKQVLNLAKEHQHPLQCIIEK 102 >gi|77165887|ref|YP_344412.1| ATP-dependent Clp protease adaptor protein ClpS [Nitrosococcus oceani ATCC 19707] gi|254433959|ref|ZP_05047467.1| ATP-dependent Clp protease adaptor protein ClpS [Nitrosococcus oceani AFC27] gi|76884201|gb|ABA58882.1| ATP-dependent Clp protease adaptor protein ClpS [Nitrosococcus oceani ATCC 19707] gi|207090292|gb|EDZ67563.1| ATP-dependent Clp protease adaptor protein ClpS [Nitrosococcus oceani AFC27] Length = 107 Score = 153 bits (388), Expect = 5e-36, Method: Composition-based stats. Identities = 49/106 (46%), Positives = 70/106 (66%) Query: 32 MNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAK 91 M K + E + + K++ P LY+V+++ND+YTPMEFV+ VLQ FF D E A Sbjct: 1 MGKINLDEDNEGGFAVDTAKPKLKRPPLYKVVMLNDDYTPMEFVVKVLQAFFAMDREKAT 60 Query: 92 CIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +M +VH +G G CGV+ YEIAE K +QV YS HQ+PL+C++E+ Sbjct: 61 RVMWQVHTEGKGICGVFTYEIAETKASQVNEYSMNHQHPLKCVLER 106 >gi|194365699|ref|YP_002028309.1| ATP-dependent Clp protease adaptor protein ClpS [Stenotrophomonas maltophilia R551-3] gi|238693433|sp|B4SIN7|CLPS_STRM5 RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|194348503|gb|ACF51626.1| ATP-dependent Clp protease adaptor protein ClpS [Stenotrophomonas maltophilia R551-3] Length = 108 Score = 153 bits (388), Expect = 6e-36, Method: Composition-based stats. Identities = 47/107 (43%), Positives = 66/107 (61%), Gaps = 1/107 (0%) Query: 32 MNKKGIAEFDNCLDSEVR-FSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETA 90 M ++ + + V +V P Y+V+L+ND+YTPM+FV+ VLQ FF D + A Sbjct: 1 MPRESSPDSHHEHGVAVEPARPEVAPPPFYQVMLLNDDYTPMDFVVDVLQQFFTMDLDKA 60 Query: 91 KCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +ML VH +G G CGV+ E+AE KV QV YSR +Q+PL C ME+ Sbjct: 61 TQVMLHVHTRGRGVCGVFTREVAETKVAQVNEYSRMNQHPLLCTMEK 107 >gi|260222810|emb|CBA32750.1| ATP-dependent Clp protease adapter protein clpS [Curvibacter putative symbiont of Hydra magnipapillata] Length = 108 Score = 153 bits (388), Expect = 6e-36, Method: Composition-based stats. Identities = 47/104 (45%), Positives = 67/104 (64%) Query: 34 KKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCI 93 K A D+ R S +V+ P +Y+V+++ND+YTPMEFV+ V+Q FF KD E A I Sbjct: 2 KPPPAGGDDGTVVLERLSQRVQPPSMYQVVMLNDDYTPMEFVVVVIQEFFGKDLEAATQI 61 Query: 94 MLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 MLK+H G G CGVY +IA KV+QV+ + + +PL+C+ E Sbjct: 62 MLKIHLDGRGVCGVYPKDIAATKVDQVLEAAHKAGHPLKCVSEP 105 >gi|290473958|ref|YP_003466832.1| modulator of ClpA substrate specificity [Xenorhabdus bovienii SS-2004] gi|289173265|emb|CBJ80040.1| modulator of ClpA substrate specificity [Xenorhabdus bovienii SS-2004] Length = 106 Score = 153 bits (388), Expect = 6e-36, Method: Composition-based stats. Identities = 45/105 (42%), Positives = 68/105 (64%), Gaps = 4/105 (3%) Query: 37 IAEFDNCLDSEV----RFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKC 92 ++EF N L E + ++ P +Y+V+L ND+YTPMEFV+ VL+ FF D E A Sbjct: 1 MSEFYNSLKIEELIEDKTEQTLQPPSMYKVILNNDDYTPMEFVVDVLRKFFSYDVERATQ 60 Query: 93 IMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +ML +H+QG CG+Y E+AE K QV Y+++H++PL C +E+ Sbjct: 61 LMLDIHYQGKAICGIYTAEVAETKAAQVNMYAKEHEHPLLCSLEK 105 >gi|270159871|ref|ZP_06188527.1| ATP-dependent Clp protease adaptor protein ClpS [Legionella longbeachae D-4968] gi|289165375|ref|YP_003455513.1| regulatory protein for ClpA substrate specificity [Legionella longbeachae NSW150] gi|269988210|gb|EEZ94465.1| ATP-dependent Clp protease adaptor protein ClpS [Legionella longbeachae D-4968] gi|288858548|emb|CBJ12429.1| regulatory protein for ClpA substrate specificity [Legionella longbeachae NSW150] Length = 107 Score = 153 bits (388), Expect = 6e-36, Method: Composition-based stats. Identities = 48/107 (44%), Positives = 73/107 (68%) Query: 32 MNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAK 91 M+ + + E +E SS+++VP+ Y+V+L+ND+YTPM+FV+ VL++FF+ E A Sbjct: 1 MSGQNLEEIVRHRIAEPEMSSEIKVPRKYKVVLLNDDYTPMDFVVDVLKHFFHLSEEMAV 60 Query: 92 CIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 IML+VH QG G CGV+ +IAE KV V Y+R++Q+PL ME + Sbjct: 61 QIMLQVHFQGKGVCGVFTRDIAETKVALVNEYARRNQHPLLSSMEPE 107 >gi|86146449|ref|ZP_01064772.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio sp. MED222] gi|218709067|ref|YP_002416688.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio splendidus LGP32] gi|254763826|sp|B7VM32|CLPS_VIBSL RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|85835712|gb|EAQ53847.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio sp. MED222] gi|218322086|emb|CAV18173.1| ATP-dependent Clp protease adaptor protein clpS [Vibrio splendidus LGP32] Length = 106 Score = 153 bits (388), Expect = 6e-36, Method: Composition-based stats. Identities = 47/95 (49%), Positives = 65/95 (68%) Query: 43 CLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGI 102 D + +KV+ P +Y V+L ND+YTPM+FVI +L+ FF D E A +MLKVH++G Sbjct: 11 GSDLLEKERTKVKPPAMYNVVLHNDDYTPMDFVIEILERFFSLDIEKATEVMLKVHYEGK 70 Query: 103 GECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 CG Y+ EIAE KV QV YS+++++PL C MEQ Sbjct: 71 AICGTYSAEIAETKVAQVTMYSKENEHPLLCTMEQ 105 >gi|85059079|ref|YP_454781.1| ATP-dependent Clp protease adaptor protein ClpS [Sodalis glossinidius str. 'morsitans'] gi|123519578|sp|Q2NTZ9|CLPS_SODGM RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|84779599|dbj|BAE74376.1| conserved hypothetical protein [Sodalis glossinidius str. 'morsitans'] Length = 106 Score = 153 bits (387), Expect = 7e-36, Method: Composition-based stats. Identities = 47/104 (45%), Positives = 66/104 (63%) Query: 34 KKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCI 93 K D +E + VR P +Y+V+L+ND+YTPMEFVI VLQ FF D E A + Sbjct: 2 GKTSDRLDEQHLAEEQVKDAVRPPSMYKVILINDDYTPMEFVIDVLQKFFSYDVERATQL 61 Query: 94 MLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 ML+VH+QG CG+Y E+AE K V Y+R++++PL C +E+ Sbjct: 62 MLRVHYQGKAVCGIYTAEVAETKAVHVNRYARENEHPLLCTLEK 105 >gi|330954576|gb|EGH54836.1| ATP-dependent Clp protease adaptor protein ClpS [Pseudomonas syringae Cit 7] Length = 120 Score = 153 bits (387), Expect = 7e-36, Method: Composition-based stats. Identities = 40/106 (37%), Positives = 63/106 (59%) Query: 32 MNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAK 91 + E D+ + ++ P +Y+V+L ND+YTPM+FV+ VL+ FF + E A Sbjct: 13 QDDPQSHEDDSAGIAVQDAKPTLQAPPMYKVVLFNDDYTPMDFVVEVLEVFFNLNRELAT 72 Query: 92 CIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +ML VH +G CG++ +IAE K QV Y+R+ Q+PL C +E+ Sbjct: 73 KVMLAVHTEGRAVCGLFTRDIAETKAMQVNQYAREGQHPLLCEIEK 118 >gi|308049699|ref|YP_003913265.1| ATP-dependent Clp protease adaptor protein ClpS [Ferrimonas balearica DSM 9799] gi|307631889|gb|ADN76191.1| ATP-dependent Clp protease adaptor protein ClpS [Ferrimonas balearica DSM 9799] Length = 104 Score = 153 bits (387), Expect = 7e-36, Method: Composition-based stats. Identities = 48/100 (48%), Positives = 66/100 (66%), Gaps = 1/100 (1%) Query: 38 AEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKV 97 E D+ ++ E + S V P LY+V+L ND+YTPMEFV+ VL FF E A +ML V Sbjct: 5 TELDHVVEHE-KQSQAVEPPPLYKVVLNNDDYTPMEFVVEVLTKFFALTQEQATEVMLTV 63 Query: 98 HHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 H++G G CGV+ Y++AE K QV YSR+H++PL C E+ Sbjct: 64 HYKGKGVCGVFTYDVAETKAAQVNRYSREHEHPLLCSTEK 103 >gi|119470167|ref|ZP_01612933.1| modulator of ClpA substrate specificity [Alteromonadales bacterium TW-7] gi|119446588|gb|EAW27862.1| modulator of ClpA substrate specificity [Alteromonadales bacterium TW-7] Length = 105 Score = 153 bits (387), Expect = 7e-36, Method: Composition-based stats. Identities = 44/104 (42%), Positives = 64/104 (61%) Query: 35 KGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIM 94 G+ + K++ P+ Y+V+L ND+YTPM+FVI VL FF D + A +M Sbjct: 2 SGMKDSGVIDTVRDSEKQKLQPPRKYKVVLNNDDYTPMDFVIEVLTTFFNMDSDRATDVM 61 Query: 95 LKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 L+VH +G G CGVY+ ++A KV QV YSR +++PL C EQ+ Sbjct: 62 LQVHEKGKGICGVYSADVAYTKVEQVNRYSRDNEHPLLCSCEQE 105 >gi|315126397|ref|YP_004068400.1| modulator of ClpA substrate specificity [Pseudoalteromonas sp. SM9913] gi|315014911|gb|ADT68249.1| modulator of ClpA substrate specificity [Pseudoalteromonas sp. SM9913] Length = 102 Score = 153 bits (387), Expect = 8e-36, Method: Composition-based stats. Identities = 47/107 (43%), Positives = 67/107 (62%), Gaps = 5/107 (4%) Query: 32 MNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAK 91 M G+ D DSE K++ P+ Y+V+L ND+YTPM+FVI +L FF D + A Sbjct: 1 MKDSGV--IDTVRDSE---KQKLQPPRKYKVVLNNDDYTPMDFVIEILMTFFNMDSDRAT 55 Query: 92 CIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 +ML++H QG G CGVY+ ++A K QV YSR +++PL C EQ+ Sbjct: 56 DVMLQIHQQGKGICGVYSADVAHTKAEQVNRYSRDNEHPLLCSCEQE 102 >gi|27065491|pdb|1LZW|A Chain A, Structural Basis Of Clps-Mediated Switch In Clpa Substrate Recognition gi|27065646|pdb|1MG9|A Chain A, The Structural Basis Of Clps-Mediated Switch In Clpa Substrate Recognition Length = 106 Score = 153 bits (387), Expect = 8e-36, Method: Composition-based stats. Identities = 47/105 (44%), Positives = 68/105 (64%), Gaps = 2/105 (1%) Query: 33 NKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKC 92 +FD + +VR + ++ P +Y+V+LVND+YTPMEFVI VLQ FF D E A Sbjct: 3 KTNDWLDFDQLAEEKVRDA--LKPPSMYKVILVNDDYTPMEFVIDVLQKFFSYDVERATQ 60 Query: 93 IMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +ML V +QG CGV+ E+AE KV V Y+R++++PL C +E+ Sbjct: 61 LMLAVAYQGKAICGVFTAEVAETKVAMVNKYARENEHPLLCTLEK 105 >gi|145589929|ref|YP_001156526.1| ATP-dependent Clp protease adaptor protein ClpS [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|145048335|gb|ABP34962.1| ATP-dependent Clp protease adaptor protein ClpS [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 118 Score = 153 bits (387), Expect = 8e-36, Method: Composition-based stats. Identities = 46/90 (51%), Positives = 66/90 (73%) Query: 48 VRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGV 107 + +++ P +Y+VLL+ND+YTPMEFV+ V+Q +F KDHETA IML+VH G G CGV Sbjct: 28 EKQVEQIKAPSMYKVLLLNDDYTPMEFVVMVIQEYFNKDHETATRIMLQVHLVGKGICGV 87 Query: 108 YAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 + ++A KV+QV+ SR+ +PLQC ME+ Sbjct: 88 FTRDVAATKVHQVIELSREAGHPLQCTMEE 117 >gi|320539589|ref|ZP_08039254.1| putative regulatory protein for ClpA substrate specificity [Serratia symbiotica str. Tucson] gi|320030348|gb|EFW12362.1| putative regulatory protein for ClpA substrate specificity [Serratia symbiotica str. Tucson] Length = 106 Score = 153 bits (387), Expect = 8e-36, Method: Composition-based stats. Identities = 46/105 (43%), Positives = 68/105 (64%), Gaps = 2/105 (1%) Query: 33 NKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKC 92 N F++ +E + ++ P +Y+V+L D+YTPMEFVI VLQ FF+ D E A Sbjct: 3 NNNDWLNFEHL--TEEKQIDALKPPSMYKVILNKDDYTPMEFVIDVLQKFFFYDIERATQ 60 Query: 93 IMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +ML+VH+QG CGV+ E+AE KV V Y+R+++YPL C +E+ Sbjct: 61 LMLRVHYQGKAICGVFTAEVAETKVIHVNCYARENEYPLLCTLEK 105 >gi|119476169|ref|ZP_01616521.1| ATP-dependent Clp protease adaptor protein ClpS [marine gamma proteobacterium HTCC2143] gi|119450796|gb|EAW32030.1| ATP-dependent Clp protease adaptor protein ClpS [marine gamma proteobacterium HTCC2143] Length = 124 Score = 153 bits (387), Expect = 8e-36, Method: Composition-based stats. Identities = 41/114 (35%), Positives = 64/114 (56%), Gaps = 3/114 (2%) Query: 26 FMADSRMNKKGIAEFDNCLDSEV---RFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNF 82 F+ SR+ N D ++ ++ P +Y+V+L+ND+YTPMEFV+ +L+ F Sbjct: 7 FLLKSRLQGDDNLPPGNEGDGDLAVAELKPALKRPPMYKVVLLNDDYTPMEFVVEILETF 66 Query: 83 FYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIME 136 F E A +ML VH G G CG++ ++AE K QV Y+R+ +PL +E Sbjct: 67 FSMGREQATQVMLAVHTHGKGVCGLFTRDVAETKAAQVNQYARESHHPLLAEVE 120 >gi|71735262|ref|YP_275268.1| ATP-dependent Clp protease adaptor protein ClpS [Pseudomonas syringae pv. phaseolicola 1448A] gi|257485425|ref|ZP_05639466.1| ATP-dependent Clp protease adaptor protein ClpS [Pseudomonas syringae pv. tabaci ATCC 11528] gi|289625413|ref|ZP_06458367.1| ATP-dependent Clp protease adaptor protein ClpS [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289649304|ref|ZP_06480647.1| ATP-dependent Clp protease adaptor protein ClpS [Pseudomonas syringae pv. aesculi str. 2250] gi|298487537|ref|ZP_07005579.1| ATP-dependent Clp protease adaptor protein clpS [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|123635959|sp|Q48H65|CLPS_PSE14 RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|71555815|gb|AAZ35026.1| ATP-dependent Clp protease adaptor protein clpS [Pseudomonas syringae pv. phaseolicola 1448A] gi|298157921|gb|EFH98999.1| ATP-dependent Clp protease adaptor protein clpS [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|330866850|gb|EGH01559.1| ATP-dependent Clp protease adaptor protein ClpS [Pseudomonas syringae pv. aesculi str. 0893_23] gi|330889671|gb|EGH22332.1| ATP-dependent Clp protease adaptor protein ClpS [Pseudomonas syringae pv. mori str. 301020] gi|331010739|gb|EGH90795.1| ATP-dependent Clp protease adaptor protein ClpS [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 120 Score = 153 bits (387), Expect = 8e-36, Method: Composition-based stats. Identities = 40/106 (37%), Positives = 62/106 (58%) Query: 32 MNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAK 91 + E D + ++ P +Y+V+L ND+YTPM+FV+ VL+ FF + E A Sbjct: 13 QDSPQSHEDDAAGIAVQDAKPTLQAPPMYKVVLFNDDYTPMDFVVEVLEVFFNLNRELAT 72 Query: 92 CIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +ML VH +G CG++ +IAE K QV Y+R+ Q+PL C +E+ Sbjct: 73 KVMLAVHTEGRAVCGLFTRDIAETKAMQVNQYARESQHPLLCEIEK 118 >gi|258621690|ref|ZP_05716721.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio mimicus VM573] gi|258626363|ref|ZP_05721210.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio mimicus VM603] gi|262165415|ref|ZP_06033152.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio mimicus VM223] gi|262171823|ref|ZP_06039501.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio mimicus MB-451] gi|258581415|gb|EEW06317.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio mimicus VM603] gi|258585921|gb|EEW10639.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio mimicus VM573] gi|261892899|gb|EEY38885.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio mimicus MB-451] gi|262025131|gb|EEY43799.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio mimicus VM223] Length = 106 Score = 153 bits (387), Expect = 9e-36, Method: Composition-based stats. Identities = 46/95 (48%), Positives = 64/95 (67%) Query: 43 CLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGI 102 LD + + V+ P +Y V+L ND+YTPM+FVI +L+ FF D E A +MLKVH++G Sbjct: 11 DLDLLEKEKTAVKPPSMYHVVLNNDDYTPMDFVIEILERFFSMDIERATQVMLKVHYEGK 70 Query: 103 GECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 CG + E+AE KV QV YSR++++PL C MEQ Sbjct: 71 AICGTFTAEVAETKVAQVTMYSRENEHPLLCTMEQ 105 >gi|320323776|gb|EFW79860.1| ATP-dependent Clp protease adaptor protein ClpS [Pseudomonas syringae pv. glycinea str. B076] gi|320327916|gb|EFW83921.1| ATP-dependent Clp protease adaptor protein ClpS [Pseudomonas syringae pv. glycinea str. race 4] gi|330881201|gb|EGH15350.1| ATP-dependent Clp protease adaptor protein ClpS [Pseudomonas syringae pv. glycinea str. race 4] Length = 120 Score = 153 bits (387), Expect = 9e-36, Method: Composition-based stats. Identities = 41/106 (38%), Positives = 62/106 (58%) Query: 32 MNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAK 91 + E D + +R P +Y+V+L ND+YTPM+FV+ VL+ FF + E A Sbjct: 13 QDSPQSHEDDAAGIAVQDAKPTLRAPPMYKVVLFNDDYTPMDFVVEVLEVFFNLNRELAT 72 Query: 92 CIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +ML VH +G CG++ +IAE K QV Y+R+ Q+PL C +E+ Sbjct: 73 KVMLAVHTEGRAVCGLFTRDIAETKAMQVNQYARESQHPLLCEIEK 118 >gi|307822307|ref|ZP_07652539.1| ATP-dependent Clp protease adaptor protein ClpS [Methylobacter tundripaludum SV96] gi|307736873|gb|EFO07718.1| ATP-dependent Clp protease adaptor protein ClpS [Methylobacter tundripaludum SV96] Length = 107 Score = 153 bits (387), Expect = 9e-36, Method: Composition-based stats. Identities = 45/100 (45%), Positives = 68/100 (68%), Gaps = 1/100 (1%) Query: 38 AEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKV 97 + D L + K++ P LY+V+L+ND++TPM+FVI +L +FF E A +ML+V Sbjct: 8 KDKDGGLAVQ-EAKPKLKRPPLYKVILLNDDFTPMDFVIEILMDFFAMSEEKATQVMLQV 66 Query: 98 HHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 H QG+G CG+Y+ ++AE KV V +YSR+H +PL C ME+ Sbjct: 67 HTQGVGVCGMYSKDVAETKVYIVNDYSREHHHPLMCSMEE 106 >gi|34499123|ref|NP_903338.1| hypothetical protein CV_3668 [Chromobacterium violaceum ATCC 12472] gi|39930967|sp|Q7NRW1|CLPS_CHRVO RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|34104974|gb|AAQ61330.1| conserved hypothetical protein [Chromobacterium violaceum ATCC 12472] Length = 106 Score = 153 bits (387), Expect = 9e-36, Method: Composition-based stats. Identities = 45/87 (51%), Positives = 64/87 (73%) Query: 51 SSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAY 110 + P +Y+VLL+ND++TPM+FV+ VLQ FF+ + E A IML+VH QG G CGVY Sbjct: 19 RVRENPPPMYKVLLLNDDFTPMDFVVQVLQQFFHMNREKATHIMLQVHTQGHGVCGVYTK 78 Query: 111 EIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 ++A KV QV+ Y++ HQ+PLQC+ME+ Sbjct: 79 DVAATKVEQVLQYAKAHQHPLQCVMEE 105 >gi|84393767|ref|ZP_00992515.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio splendidus 12B01] gi|84375629|gb|EAP92528.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio splendidus 12B01] Length = 106 Score = 153 bits (387), Expect = 9e-36, Method: Composition-based stats. Identities = 47/95 (49%), Positives = 65/95 (68%) Query: 43 CLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGI 102 D + +KV+ P +Y V+L ND+YTPM+FVI +L+ FF D E A +MLKVH++G Sbjct: 11 GSDLLEKEETKVKPPAMYNVVLNNDDYTPMDFVIEILERFFSLDIEQATEVMLKVHYEGK 70 Query: 103 GECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 CG Y+ EIAE KV QV YS+++++PL C MEQ Sbjct: 71 AICGTYSAEIAETKVAQVKMYSKENEHPLLCTMEQ 105 >gi|226944902|ref|YP_002799975.1| ATP-dependent Clp protease adaptor protein ClpS [Azotobacter vinelandii DJ] gi|259491243|sp|C1DKZ8|CLPS_AZOVD RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|226719829|gb|ACO79000.1| ATP-dependent clp protease adaptor protein, ClpS [Azotobacter vinelandii DJ] Length = 120 Score = 153 bits (386), Expect = 9e-36, Method: Composition-based stats. Identities = 39/106 (36%), Positives = 64/106 (60%) Query: 32 MNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAK 91 ++ E D+ ++VP +Y+V++ ND+YTPM+FV+ VL+ FF + E A Sbjct: 13 QDRPEPREDDSYGVVVQESKPALKVPPMYKVVMFNDDYTPMDFVVEVLEKFFNLNRELAT 72 Query: 92 CIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +ML VH +G CG++ ++AE K QV Y+R+ Q+PL C +E+ Sbjct: 73 KVMLTVHTEGRAVCGMFTRDVAETKAMQVNQYARECQHPLLCEIEK 118 >gi|330427907|gb|AEC19241.1| ATP-dependent Clp protease adaptor protein ClpS [Pusillimonas sp. T7-7] Length = 107 Score = 153 bits (386), Expect = 9e-36, Method: Composition-based stats. Identities = 45/89 (50%), Positives = 61/89 (68%) Query: 49 RFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVY 108 R +K+ P +Y+V+L+ND+YTPMEFV+ VLQ F K+ + A IMLKVHH+G G CGVY Sbjct: 15 RQPAKLAPPPMYQVVLLNDDYTPMEFVVAVLQRIFGKNEDEAARIMLKVHHEGRGVCGVY 74 Query: 109 AYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +IA +V V + Q+PLQC+ME Sbjct: 75 PRDIAATRVEMVRQMAHARQHPLQCVMEP 103 >gi|239815631|ref|YP_002944541.1| ATP-dependent Clp protease adaptor protein ClpS [Variovorax paradoxus S110] gi|259491251|sp|C5CLL8|CLPS_VARPS RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|239802208|gb|ACS19275.1| ATP-dependent Clp protease adaptor protein ClpS [Variovorax paradoxus S110] Length = 119 Score = 153 bits (386), Expect = 9e-36, Method: Composition-based stats. Identities = 50/110 (45%), Positives = 69/110 (62%), Gaps = 2/110 (1%) Query: 28 ADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDH 87 + K + D+ + R K P++Y+V+++ND+YTPMEFVI VLQ +F KD Sbjct: 10 STPPAQKPAGDDGDSVVL--ERRPQKTAPPQMYQVVMLNDDYTPMEFVIVVLQEYFNKDR 67 Query: 88 ETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 ETA IMLK+H G G CGVY+ ++A KVNQVM + Q +PLQC+ E Sbjct: 68 ETATQIMLKIHLDGRGVCGVYSRDLAATKVNQVMEAAHQAGHPLQCVSEP 117 >gi|124267648|ref|YP_001021652.1| hypothetical protein Mpe_A2462 [Methylibium petroleiphilum PM1] gi|124260423|gb|ABM95417.1| conserved hypothetical protein [Methylibium petroleiphilum PM1] Length = 118 Score = 153 bits (386), Expect = 9e-36, Method: Composition-based stats. Identities = 47/99 (47%), Positives = 67/99 (67%) Query: 38 AEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKV 97 + R S++V P++Y+V+L+ND+YTPMEFV+ VLQ FF +D ETA IMLK+ Sbjct: 18 PDDGQGAVVAERQSARVEPPRMYQVVLLNDDYTPMEFVVMVLQEFFQRDIETATQIMLKI 77 Query: 98 HHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIME 136 HH+G G CGVY ++A KV V+ +++ +PLQC ME Sbjct: 78 HHEGRGVCGVYTKDVASTKVESVLAAAKRSGHPLQCTME 116 >gi|149909598|ref|ZP_01898251.1| ATP-dependent Clp protease adaptor protein ClpS [Moritella sp. PE36] gi|149807302|gb|EDM67255.1| ATP-dependent Clp protease adaptor protein ClpS [Moritella sp. PE36] Length = 104 Score = 153 bits (386), Expect = 1e-35, Method: Composition-based stats. Identities = 48/103 (46%), Positives = 68/103 (66%), Gaps = 2/103 (1%) Query: 37 IAEFDNCLDSEVRFSSKV--RVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIM 94 +++ D +D + S++ + P Y+V L ND+YTPM+FV+ VLQ FF D + A IM Sbjct: 1 MSKLDELIDFKTSIESELELKPPSFYKVFLNNDDYTPMDFVVDVLQRFFSMDIDKANQIM 60 Query: 95 LKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 L VHH+G G CGV+ EIAE KV+QVM Y++ ++ L C MEQ Sbjct: 61 LTVHHRGRGVCGVFTAEIAETKVSQVMQYAKDNEQSLLCTMEQ 103 >gi|78776659|ref|YP_392974.1| ATP-dependent Clp protease adaptor protein ClpS [Sulfurimonas denitrificans DSM 1251] gi|78497199|gb|ABB43739.1| ATP-dependent Clp protease adaptor protein ClpS [Sulfurimonas denitrificans DSM 1251] Length = 99 Score = 153 bits (386), Expect = 1e-35, Method: Composition-based stats. Identities = 44/97 (45%), Positives = 65/97 (67%) Query: 42 NCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQG 101 +D E + K++ PK Y+VLL+ND+YT MEFVI +L F+K++E A IML++H + Sbjct: 3 TNIDLETKEKVKIKYPKKYKVLLLNDDYTSMEFVIDILITIFHKNYEQAHQIMLEIHKKT 62 Query: 102 IGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 G CG+Y YEIAE KV QV +R + + L+ ME++ Sbjct: 63 KGICGIYTYEIAETKVMQVHKKARDNGFALRATMEEE 99 >gi|319763343|ref|YP_004127280.1| ATP-dependent clp protease adaptor protein clps [Alicycliphilus denitrificans BC] gi|317117904|gb|ADV00393.1| ATP-dependent Clp protease adaptor protein ClpS [Alicycliphilus denitrificans BC] Length = 120 Score = 153 bits (386), Expect = 1e-35, Method: Composition-based stats. Identities = 44/100 (44%), Positives = 65/100 (65%) Query: 38 AEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKV 97 + + R + K + P++Y+V+++ND+YTPMEFV+ VLQ FF KD E A IMLK+ Sbjct: 19 SRDEGGSAVLERRTQKTKPPQMYQVVMLNDDYTPMEFVVVVLQEFFNKDREAATQIMLKI 78 Query: 98 HHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 H G G CGVY ++A KV QV++ + + +PLQC+ E Sbjct: 79 HLDGKGVCGVYTRDVAATKVEQVLDAAHRAGHPLQCVSEP 118 >gi|171058346|ref|YP_001790695.1| ATP-dependent Clp protease adaptor protein ClpS [Leptothrix cholodnii SP-6] gi|238689087|sp|B1XY29|CLPS_LEPCP RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|170775791|gb|ACB33930.1| ATP-dependent Clp protease adaptor protein ClpS [Leptothrix cholodnii SP-6] Length = 115 Score = 153 bits (386), Expect = 1e-35, Method: Composition-based stats. Identities = 45/113 (39%), Positives = 67/113 (59%), Gaps = 3/113 (2%) Query: 27 MADSRMNKKGIA---EFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFF 83 M+D + N + + + +V P++Y+V+++ND++TPMEFV+ VLQ FF Sbjct: 1 MSDQKPNTPNVPAPPDDGQGAVIAEKQLQRVEPPRVYQVVMLNDDFTPMEFVVMVLQQFF 60 Query: 84 YKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIME 136 D E A IMLK+HH+G CGVY ++A KV V +R+ +PLQC ME Sbjct: 61 RHDLEAATQIMLKIHHEGRAVCGVYTQDVAATKVEMVQAAARRAGHPLQCTME 113 >gi|148977557|ref|ZP_01814136.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrionales bacterium SWAT-3] gi|145963208|gb|EDK28475.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrionales bacterium SWAT-3] Length = 106 Score = 153 bits (386), Expect = 1e-35, Method: Composition-based stats. Identities = 47/93 (50%), Positives = 66/93 (70%) Query: 45 DSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGE 104 D + ++KV+ P +Y V+L ND+YTPM+FVI +L+ FF D E A +MLKVH++G Sbjct: 13 DLLEKEATKVKPPAMYNVVLNNDDYTPMDFVIEILERFFSLDIEKATEVMLKVHYEGKAI 72 Query: 105 CGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 CG Y+ EIAE KV QV YS+++++PL C MEQ Sbjct: 73 CGTYSAEIAETKVAQVTMYSKENEHPLLCTMEQ 105 >gi|126725142|ref|ZP_01740985.1| ATP-dependent Clp protease adaptor protein ClpS [Rhodobacterales bacterium HTCC2150] gi|126706306|gb|EBA05396.1| ATP-dependent Clp protease adaptor protein ClpS [Rhodobacterales bacterium HTCC2150] Length = 115 Score = 153 bits (386), Expect = 1e-35, Method: Composition-based stats. Identities = 48/111 (43%), Positives = 74/111 (66%), Gaps = 1/111 (0%) Query: 29 DSRMNKKGIAEFDNCL-DSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDH 87 D ++ + DN D + ++ + P +Y+VLL+ND+YTPMEFV+HVL+ FF ++ Sbjct: 4 DYQIKMSSDDDGDNSEGDVATKTRARTKRPPMYKVLLLNDDYTPMEFVVHVLERFFGINN 63 Query: 88 ETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 A IML VH +G+ GV+++EIAEMKV QVM+ + Q ++PLQC E++ Sbjct: 64 AQAVEIMLTVHKKGMAVVGVFSHEIAEMKVTQVMDLAHQQEHPLQCTFEKE 114 >gi|330825577|ref|YP_004388880.1| ATP-dependent Clp protease adapter protein clpS [Alicycliphilus denitrificans K601] gi|329310949|gb|AEB85364.1| ATP-dependent Clp protease adapter protein clpS [Alicycliphilus denitrificans K601] Length = 120 Score = 153 bits (386), Expect = 1e-35, Method: Composition-based stats. Identities = 44/90 (48%), Positives = 63/90 (70%) Query: 48 VRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGV 107 R + K + P++Y+V+++ND+YTPMEFV+ VLQ FF KD E A IMLK+H G G CGV Sbjct: 29 ERRTQKTKPPQMYQVVMLNDDYTPMEFVVVVLQEFFNKDREAATQIMLKIHLDGKGVCGV 88 Query: 108 YAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 Y ++A KV QV++ + + +PLQC+ E Sbjct: 89 YTRDVAATKVEQVLDAAHRAGHPLQCVSEP 118 >gi|330446454|ref|ZP_08310106.1| specificity factor for ClpA-ClpP chaperone-protease complex [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328490645|dbj|GAA04603.1| specificity factor for ClpA-ClpP chaperone-protease complex [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 106 Score = 152 bits (385), Expect = 1e-35, Method: Composition-based stats. Identities = 46/93 (49%), Positives = 63/93 (67%) Query: 45 DSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGE 104 D +V+ P +Y+V+L ND+YTPM+FVI VLQ FF D E A +ML VH++G Sbjct: 13 DILEEEEIQVKPPSMYKVILNNDDYTPMDFVIDVLQTFFSMDLEKAAQLMLAVHYEGKAV 72 Query: 105 CGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 CG + E+AE KV QVM Y+R+H++PL C ME+ Sbjct: 73 CGTFTAEVAETKVAQVMMYAREHEHPLLCTMEK 105 >gi|184158341|ref|YP_001846680.1| ATP-dependent Clp protease adaptor protein ClpS [Acinetobacter baumannii ACICU] gi|183209935|gb|ACC57333.1| uncharacterized conserved protein [Acinetobacter baumannii ACICU] Length = 93 Score = 152 bits (385), Expect = 1e-35, Method: Composition-based stats. Identities = 41/87 (47%), Positives = 59/87 (67%) Query: 52 SKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYE 111 +++ P LY V+L+ND+YTPM+FVI +LQ +F + + A +ML VH++G G GVY + Sbjct: 6 PELKRPPLYAVVLLNDDYTPMDFVIEILQQYFAMNLDQATQVMLTVHYEGKGTAGVYPRD 65 Query: 112 IAEMKVNQVMNYSRQHQYPLQCIMEQK 138 IAE K N V NY+R +PL C +E K Sbjct: 66 IAETKANLVNNYARSQGHPLLCQIEPK 92 >gi|89073385|ref|ZP_01159909.1| ATP-dependent Clp protease adaptor protein ClpS [Photobacterium sp. SKA34] gi|89050872|gb|EAR56346.1| ATP-dependent Clp protease adaptor protein ClpS [Photobacterium sp. SKA34] Length = 106 Score = 152 bits (385), Expect = 1e-35, Method: Composition-based stats. Identities = 46/93 (49%), Positives = 63/93 (67%) Query: 45 DSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGE 104 D +V+ P +Y+V+L ND+YTPM+FVI VLQ FF D E A +ML VH++G Sbjct: 13 DILEEEEIQVKPPSMYKVILNNDDYTPMDFVIEVLQTFFSMDLEKAAQLMLAVHYEGKAI 72 Query: 105 CGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 CG + E+AE KV QVM Y+R+H++PL C ME+ Sbjct: 73 CGTFTAEVAETKVAQVMMYAREHEHPLLCTMEK 105 >gi|15641156|ref|NP_230788.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121587408|ref|ZP_01677177.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio cholerae 2740-80] gi|121726248|ref|ZP_01679538.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio cholerae V52] gi|147674267|ref|YP_001216663.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio cholerae O395] gi|153214234|ref|ZP_01949269.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio cholerae 1587] gi|153802564|ref|ZP_01957150.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio cholerae MZO-3] gi|153816957|ref|ZP_01969624.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio cholerae NCTC 8457] gi|153821999|ref|ZP_01974666.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio cholerae B33] gi|153826033|ref|ZP_01978700.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio cholerae MZO-2] gi|153828695|ref|ZP_01981362.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio cholerae 623-39] gi|227081316|ref|YP_002809867.1| ATP-dependent Clp protease adaptor protein [Vibrio cholerae M66-2] gi|229505262|ref|ZP_04394772.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio cholerae BX 330286] gi|229511068|ref|ZP_04400547.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio cholerae B33] gi|229515526|ref|ZP_04404985.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio cholerae TMA 21] gi|229518188|ref|ZP_04407632.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio cholerae RC9] gi|229520427|ref|ZP_04409852.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio cholerae TM 11079-80] gi|229529768|ref|ZP_04419158.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio cholerae 12129(1)] gi|229608281|ref|YP_002878929.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio cholerae MJ-1236] gi|254225532|ref|ZP_04919142.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio cholerae V51] gi|254291568|ref|ZP_04962358.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio cholerae AM-19226] gi|254848271|ref|ZP_05237621.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio cholerae MO10] gi|255745555|ref|ZP_05419503.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio cholera CIRS 101] gi|262158371|ref|ZP_06029487.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio cholerae INDRE 91/1] gi|262170183|ref|ZP_06037871.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio cholerae RC27] gi|297578745|ref|ZP_06940673.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio cholerae RC385] gi|298498752|ref|ZP_07008559.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio cholerae MAK 757] gi|12230810|sp|Q9KSW3|CLPS_VIBCH RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|172047399|sp|A5F294|CLPS_VIBC3 RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|254763825|sp|C3LLJ0|CLPS_VIBCM RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|9655616|gb|AAF94302.1| conserved hypothetical protein [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121548328|gb|EAX58392.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio cholerae 2740-80] gi|121631194|gb|EAX63567.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio cholerae V52] gi|124115483|gb|EAY34303.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio cholerae 1587] gi|124121878|gb|EAY40621.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio cholerae MZO-3] gi|125622002|gb|EAZ50326.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio cholerae V51] gi|126512544|gb|EAZ75138.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio cholerae NCTC 8457] gi|126520464|gb|EAZ77687.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio cholerae B33] gi|146316150|gb|ABQ20689.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio cholerae O395] gi|148875848|gb|EDL73983.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio cholerae 623-39] gi|149740253|gb|EDM54400.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio cholerae MZO-2] gi|150422520|gb|EDN14477.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio cholerae AM-19226] gi|227009204|gb|ACP05416.1| ATP-dependent Clp protease adaptor protein [Vibrio cholerae M66-2] gi|227013010|gb|ACP09220.1| ATP-dependent Clp protease adaptor protein [Vibrio cholerae O395] gi|229333542|gb|EEN99028.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio cholerae 12129(1)] gi|229342525|gb|EEO07518.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio cholerae TM 11079-80] gi|229344903|gb|EEO09877.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio cholerae RC9] gi|229347295|gb|EEO12255.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio cholerae TMA 21] gi|229351033|gb|EEO15974.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio cholerae B33] gi|229357485|gb|EEO22402.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio cholerae BX 330286] gi|229370936|gb|ACQ61359.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio cholerae MJ-1236] gi|254843976|gb|EET22390.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio cholerae MO10] gi|255736630|gb|EET92027.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio cholera CIRS 101] gi|262021352|gb|EEY40065.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio cholerae RC27] gi|262029812|gb|EEY48460.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio cholerae INDRE 91/1] gi|297536339|gb|EFH75172.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio cholerae RC385] gi|297543085|gb|EFH79135.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio cholerae MAK 757] gi|327483847|gb|AEA78254.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio cholerae LMA3894-4] Length = 106 Score = 152 bits (385), Expect = 1e-35, Method: Composition-based stats. Identities = 45/95 (47%), Positives = 63/95 (66%) Query: 43 CLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGI 102 D + + V+ P +Y V+L ND+YTPM+FVI +L+ FF D E A +MLKVH++G Sbjct: 11 DFDLLEKEKTAVKPPSMYHVVLNNDDYTPMDFVIEILERFFSMDIERATQVMLKVHYEGK 70 Query: 103 GECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 CG + E+AE KV QV YSR++++PL C MEQ Sbjct: 71 AICGTFTAEVAETKVAQVTMYSRENEHPLLCTMEQ 105 >gi|149376383|ref|ZP_01894146.1| ATP-dependent Clp protease adaptor protein ClpS [Marinobacter algicola DG893] gi|149359397|gb|EDM47858.1| ATP-dependent Clp protease adaptor protein ClpS [Marinobacter algicola DG893] Length = 119 Score = 152 bits (385), Expect = 1e-35, Method: Composition-based stats. Identities = 43/109 (39%), Positives = 63/109 (57%), Gaps = 3/109 (2%) Query: 29 DSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHE 88 + + + + D + E ++ P +RVLL+ND+YTPM+FV+ VL FF + E Sbjct: 12 NQGEDDQPGHQDDVSVAPE---KPALKRPARFRVLLLNDDYTPMDFVVDVLMKFFGMNEE 68 Query: 89 TAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 A +ML VH QG CGVY +IAE K QV YS + ++PL C +E+ Sbjct: 69 KATQVMLLVHTQGKAVCGVYTRDIAETKAAQVNQYSSECEHPLLCEIER 117 >gi|226939299|ref|YP_002794370.1| ATP-dependent Clp protease adaptor protein ClpS [Laribacter hongkongensis HLHK9] gi|226714223|gb|ACO73361.1| ATP-dependent Clp protease adaptor protein ClpS [Laribacter hongkongensis HLHK9] Length = 103 Score = 152 bits (385), Expect = 1e-35, Method: Composition-based stats. Identities = 40/87 (45%), Positives = 63/87 (72%) Query: 51 SSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAY 110 + P +Y+V+L+ND++TPM+FV+ VL+ FFY E A +MLK+H +G G CG + Sbjct: 15 KIRTAPPPMYKVVLLNDDFTPMDFVVIVLERFFYMGREQATQVMLKIHTEGRGICGTFTR 74 Query: 111 EIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 ++A KV+QV +Y+R H++PLQC+ME+ Sbjct: 75 DVAATKVSQVRDYARTHEHPLQCVMEE 101 >gi|77919855|ref|YP_357670.1| ATP-dependent Clp protease adaptor protein ClpS [Pelobacter carbinolicus DSM 2380] gi|77545938|gb|ABA89500.1| ATP-dependent Clp protease adaptor protein ClpS [Pelobacter carbinolicus DSM 2380] Length = 104 Score = 152 bits (385), Expect = 1e-35, Method: Composition-based stats. Identities = 42/100 (42%), Positives = 65/100 (65%) Query: 38 AEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKV 97 + + + E R +++ P L+RVL+ ND+YT MEFV+ VLQ F+K A IML + Sbjct: 4 KKTSSDVHIEERKATRTAPPPLFRVLMHNDDYTTMEFVVEVLQGVFHKSAAEAHRIMLNI 63 Query: 98 HHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 H++G G+CG + +EIAE KV +V +RQ +PL+C +E+ Sbjct: 64 HNEGTGQCGTFPHEIAETKVARVHQVARQAGFPLRCSLEE 103 >gi|332035126|gb|EGI71639.1| ATP-dependent Clp protease adaptor protein ClpS [Pseudoalteromonas haloplanktis ANT/505] Length = 102 Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats. Identities = 49/107 (45%), Positives = 68/107 (63%), Gaps = 5/107 (4%) Query: 32 MNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAK 91 M G+ D DSE K++ P+ Y+V+L ND+YTPM+FVI VL FF D + A Sbjct: 1 MKDSGV--IDTVRDSE---KQKLQPPRKYKVVLNNDDYTPMDFVIEVLTTFFNMDSDRAT 55 Query: 92 CIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 +ML+VH +G G CGVY+ ++A KV QV YSR +++PL C EQ+ Sbjct: 56 DVMLQVHEKGKGICGVYSADVAHTKVEQVNRYSRDNEHPLLCSCEQE 102 >gi|15805613|ref|NP_294309.1| ATP-dependent Clp protease adaptor protein ClpS [Deinococcus radiodurans R1] gi|6458284|gb|AAF10166.1|AE001917_3 conserved hypothetical protein [Deinococcus radiodurans R1] Length = 139 Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats. Identities = 44/134 (32%), Positives = 75/134 (55%), Gaps = 8/134 (5%) Query: 13 VKRDGILALMSFIFMADSR------MNKKGIAEFDNCLD--SEVRFSSKVRVPKLYRVLL 64 +R + L S + M + I + ++ ++ + P+L+RVLL Sbjct: 2 ARRGALPVLKSAAPLGGGARPILGAMTRPTIPPGPPGAEGRTQTLERTETKKPRLWRVLL 61 Query: 65 VNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYS 124 +ND+YTPM++V+ VL+ FF K + A+ IML VHH+G G GVY ++AE KV QV ++ Sbjct: 62 LNDDYTPMDYVVQVLEQFFRKTEQEAELIMLAVHHKGQGVAGVYTRDVAETKVAQVTAHA 121 Query: 125 RQHQYPLQCIMEQK 138 ++ +PL+ + E + Sbjct: 122 QREGHPLRVVAEPE 135 >gi|126733462|ref|ZP_01749209.1| ATP-dependent Clp protease, putative [Roseobacter sp. CCS2] gi|126716328|gb|EBA13192.1| ATP-dependent Clp protease, putative [Roseobacter sp. CCS2] Length = 113 Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats. Identities = 44/91 (48%), Positives = 68/91 (74%) Query: 48 VRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGV 107 + K + P +Y+VL++ND++TPMEFV+HVL+ FF H A +ML VH +G+ GV Sbjct: 23 LETKPKTKRPPMYKVLILNDDFTPMEFVVHVLERFFGLSHAQAFELMLTVHKKGVAVVGV 82 Query: 108 YAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 +++EIAE KV QVM+++++HQ+PLQC ME++ Sbjct: 83 FSHEIAETKVAQVMDFAQRHQHPLQCTMEKE 113 >gi|323496571|ref|ZP_08101624.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio sinaloensis DSM 21326] gi|323318317|gb|EGA71275.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio sinaloensis DSM 21326] Length = 106 Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats. Identities = 43/93 (46%), Positives = 63/93 (67%) Query: 45 DSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGE 104 D +K++ P +Y V+L ND+YTPM+FVI +L+ FF D + A +MLKVH++G Sbjct: 13 DLLELEKTKIKPPSMYNVVLNNDDYTPMDFVIEILERFFSMDEDKATQVMLKVHYEGKAI 72 Query: 105 CGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 CG + E+AE KV QV YS+++++PL C MEQ Sbjct: 73 CGTFTAEVAETKVAQVTMYSKENEHPLLCTMEQ 105 >gi|285018228|ref|YP_003375939.1| ATP-dependent clp protease adaptor protein clps [Xanthomonas albilineans GPE PC73] gi|283473446|emb|CBA15951.1| putative atp-dependent clp protease adaptor protein clps [Xanthomonas albilineans] Length = 94 Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats. Identities = 47/87 (54%), Positives = 60/87 (68%) Query: 51 SSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAY 110 + P +Y+VLL+ND+YTPMEFV+ VLQ FF D E A +ML VH +G G CGVY Sbjct: 7 KPETARPPMYQVLLLNDDYTPMEFVVTVLQQFFALDLERATQVMLHVHTRGRGVCGVYTR 66 Query: 111 EIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 E+AE KV QV +SR +Q+PL C ME+ Sbjct: 67 EVAESKVAQVNEFSRMNQHPLLCTMEK 93 >gi|217969671|ref|YP_002354905.1| ATP-dependent Clp protease adaptor protein ClpS [Thauera sp. MZ1T] gi|217506998|gb|ACK54009.1| ATP-dependent Clp protease adaptor protein ClpS [Thauera sp. MZ1T] Length = 102 Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats. Identities = 45/87 (51%), Positives = 66/87 (75%) Query: 51 SSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAY 110 ++ R P L++V+L+ND+YTPM+FVI VLQ +F D E A +ML+VH +G+G CGV+ Sbjct: 15 RTRTRPPPLFKVMLLNDDYTPMDFVIVVLQKYFGMDRERATRVMLQVHREGMGVCGVFPR 74 Query: 111 EIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +IA KV QV +++RQHQ+PL C+ME+ Sbjct: 75 DIATTKVEQVTSFARQHQHPLACVMEE 101 >gi|86139108|ref|ZP_01057679.1| ATP-dependent Clp protease, adaptor protein ClpS [Roseobacter sp. MED193] gi|85824339|gb|EAQ44543.1| ATP-dependent Clp protease, adaptor protein ClpS [Roseobacter sp. MED193] Length = 114 Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats. Identities = 45/90 (50%), Positives = 64/90 (71%) Query: 49 RFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVY 108 + K + P Y+VLL+ND+YTPMEFV+ VL+ FF H + IML VH +G+ GV+ Sbjct: 24 KTRPKTQRPPRYKVLLLNDDYTPMEFVVMVLERFFGMTHAQSFEIMLTVHKKGVAVVGVF 83 Query: 109 AYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 +EIAE KV QVM+++ +HQ+PLQC ME++ Sbjct: 84 THEIAETKVAQVMDFANRHQHPLQCTMEKE 113 >gi|330987929|gb|EGH86032.1| ATP-dependent Clp protease adaptor protein ClpS [Pseudomonas syringae pv. lachrymans str. M301315] Length = 120 Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats. Identities = 40/106 (37%), Positives = 61/106 (57%) Query: 32 MNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAK 91 + E D + ++ P +Y+V+L ND+YTPM+FV+ VL+ FF + E A Sbjct: 13 QDSPQSHEDDAAGIAVQDAKPTLQAPPMYKVVLFNDDYTPMDFVVEVLEVFFNLNRELAT 72 Query: 92 CIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +ML VH +G CG++ +IAE K QV Y+R+ Q+PL C E+ Sbjct: 73 KVMLAVHTEGRAVCGLFTRDIAETKAMQVNQYARESQHPLLCETEK 118 >gi|300722512|ref|YP_003711802.1| modulator of ClpA substrate specificity [Xenorhabdus nematophila ATCC 19061] gi|297629019|emb|CBJ89604.1| modulator of ClpA substrate specificity [Xenorhabdus nematophila ATCC 19061] Length = 106 Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats. Identities = 46/105 (43%), Positives = 66/105 (62%), Gaps = 4/105 (3%) Query: 37 IAEFDNCLDSEV----RFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKC 92 + EF N L + +R P +Y+V+L ND+YTPMEFV+ VLQ FF + E A Sbjct: 1 MTEFYNDLKVKEFIKDDTKQTLRPPSMYQVVLNNDDYTPMEFVVDVLQKFFSYNVERATQ 60 Query: 93 IMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +ML VH++G CG+Y E+AE K QV Y+R+H++PL C +E+ Sbjct: 61 LMLDVHYKGKAVCGIYTAEVAETKAAQVNMYAREHEHPLLCTLEK 105 >gi|323493245|ref|ZP_08098374.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio brasiliensis LMG 20546] gi|323312511|gb|EGA65646.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio brasiliensis LMG 20546] Length = 106 Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats. Identities = 44/93 (47%), Positives = 63/93 (67%) Query: 45 DSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGE 104 D +KV+ P +Y V+L ND+YTPM+FVI +L+ FF D + A +ML+VH++G Sbjct: 13 DLLELEKTKVKPPSMYNVVLNNDDYTPMDFVIEILERFFSMDIDKATQVMLQVHYEGKAI 72 Query: 105 CGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 CG Y E+AE KV QV YS+++++PL C MEQ Sbjct: 73 CGTYTAEVAETKVAQVTMYSKENEHPLLCTMEQ 105 >gi|332110106|gb|EGJ10734.1| hypothetical protein RBXJA2T_10429 [Rubrivivax benzoatilyticus JA2] Length = 110 Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats. Identities = 50/108 (46%), Positives = 71/108 (65%), Gaps = 3/108 (2%) Query: 32 MNKKGIAEFDNCLDSEV---RFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHE 88 M + D V R + +V+ P LY+V+L+ND+YTPMEFV+ VLQ++F +D + Sbjct: 1 MKPPPLPGQDGGAGGAVVAERKAQRVKPPSLYQVVLLNDDYTPMEFVVMVLQHYFQRDLD 60 Query: 89 TAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIME 136 TA IMLK+HH+G G CGVY ++A KV V+ +R+ +PLQCIME Sbjct: 61 TATHIMLKIHHEGRGVCGVYPKDVAATKVELVLAAARRDGHPLQCIME 108 >gi|226355736|ref|YP_002785476.1| ATP-dependent Clp protease adaptor protein clpS [Deinococcus deserti VCD115] gi|226317726|gb|ACO45722.1| putative ATP-dependent Clp protease adaptor protein clpS [Deinococcus deserti VCD115] Length = 105 Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats. Identities = 45/102 (44%), Positives = 66/102 (64%) Query: 37 IAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLK 96 + D ++ S + P+LYRVLL+ND+YTPMEFV+ VL+ +F K + A+ IML Sbjct: 1 MTRRDGESHTQTLERSATQRPRLYRVLLLNDDYTPMEFVVRVLELYFRKTEQEAELIMLA 60 Query: 97 VHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 VHH+G G G+Y ++AE KV QV + +RQ YPL+ + E + Sbjct: 61 VHHKGQGVAGIYTRDVAETKVAQVTDRARQEGYPLRLVSEPE 102 >gi|94499670|ref|ZP_01306207.1| ATP-dependent Clp protease adaptor protein ClpS [Oceanobacter sp. RED65] gi|94428424|gb|EAT13397.1| ATP-dependent Clp protease adaptor protein ClpS [Oceanobacter sp. RED65] Length = 116 Score = 151 bits (383), Expect = 2e-35, Method: Composition-based stats. Identities = 47/106 (44%), Positives = 65/106 (61%) Query: 32 MNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAK 91 +N D + +++ P LY+V+++ND+YTPM+FVI VL FF D E A Sbjct: 8 LNMGDKESEDEHGIAVAPSKPELKRPSLYQVIMLNDDYTPMDFVIDVLTRFFAMDMEKAT 67 Query: 92 CIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 IML VH QG CGVY +IAE K QVM Y+ +HQ+PL+C ++Q Sbjct: 68 QIMLAVHTQGSAVCGVYTKDIAETKAAQVMAYAEEHQHPLKCNIQQ 113 >gi|77360665|ref|YP_340240.1| modulator of ClpA substrate specificity [Pseudoalteromonas haloplanktis TAC125] gi|76875576|emb|CAI86797.1| modulator of ClpA substrate specificity [Pseudoalteromonas haloplanktis TAC125] Length = 102 Score = 151 bits (383), Expect = 2e-35, Method: Composition-based stats. Identities = 41/102 (40%), Positives = 63/102 (61%) Query: 37 IAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLK 96 + + + K++ P+ Y+V+L ND+YTPM+FVI VL FF D + A +ML+ Sbjct: 1 MKDSGVIDIVRDKEKQKLQPPRKYKVVLNNDDYTPMDFVIEVLMTFFNMDSDRATDVMLQ 60 Query: 97 VHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 +H QG G CGV++ ++A K QV YSR +++PL C EQ+ Sbjct: 61 IHQQGKGICGVFSSDVAHTKAEQVNRYSRDNEHPLLCSCEQE 102 >gi|326316818|ref|YP_004234490.1| ATP-dependent Clp protease adaptor protein ClpS [Acidovorax avenae subsp. avenae ATCC 19860] gi|323373654|gb|ADX45923.1| ATP-dependent Clp protease adaptor protein ClpS [Acidovorax avenae subsp. avenae ATCC 19860] Length = 112 Score = 151 bits (383), Expect = 2e-35, Method: Composition-based stats. Identities = 45/100 (45%), Positives = 64/100 (64%) Query: 38 AEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKV 97 + D R + + + P++Y+V+++ND+YTPMEFVI VLQ FF KD E A IMLK+ Sbjct: 11 SRDDGGSVVLERRTQRTQPPQMYQVVMLNDDYTPMEFVIVVLQEFFGKDREAATQIMLKI 70 Query: 98 HHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 H G G CGVY+ ++A KV QV + + +PLQC+ E Sbjct: 71 HLDGKGVCGVYSRDVAATKVEQVREAAHKAGHPLQCLSEP 110 >gi|254506183|ref|ZP_05118327.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio parahaemolyticus 16] gi|219551001|gb|EED27982.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio parahaemolyticus 16] Length = 106 Score = 151 bits (383), Expect = 2e-35, Method: Composition-based stats. Identities = 44/93 (47%), Positives = 63/93 (67%) Query: 45 DSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGE 104 D +KV+ P +Y V+L ND+YTPM+FVI +L+ FF D + A +ML+VH++G Sbjct: 13 DLLELEKTKVKPPSMYNVVLNNDDYTPMDFVIEILERFFSMDADKATQVMLQVHYEGKAI 72 Query: 105 CGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 CG Y E+AE KV QV YS+++++PL C MEQ Sbjct: 73 CGTYTAEVAETKVAQVTMYSKENEHPLLCTMEQ 105 >gi|300113413|ref|YP_003759988.1| ATP-dependent Clp protease adaptor protein ClpS [Nitrosococcus watsonii C-113] gi|299539350|gb|ADJ27667.1| ATP-dependent Clp protease adaptor protein ClpS [Nitrosococcus watsonii C-113] Length = 107 Score = 151 bits (383), Expect = 2e-35, Method: Composition-based stats. Identities = 48/106 (45%), Positives = 67/106 (63%) Query: 32 MNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAK 91 M K E + K++ P LY+V+++ND+YTPMEFV+ VLQ FF D A Sbjct: 1 MGKINPDEENEGGFVVDTAKPKLKRPPLYKVVMLNDDYTPMEFVVKVLQTFFAMDRGKAT 60 Query: 92 CIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +M +VH +G G CGV+ YEIAE K +QV YS HQ+PL+C++E+ Sbjct: 61 RVMWQVHTEGRGICGVFTYEIAETKASQVNEYSMNHQHPLKCVLER 106 >gi|94985574|ref|YP_604938.1| ATP-dependent Clp protease adaptor protein ClpS [Deinococcus geothermalis DSM 11300] gi|94555855|gb|ABF45769.1| ATP-dependent Clp protease adaptor protein ClpS [Deinococcus geothermalis DSM 11300] Length = 113 Score = 151 bits (383), Expect = 2e-35, Method: Composition-based stats. Identities = 45/109 (41%), Positives = 65/109 (59%) Query: 30 SRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHET 89 + G + R + + P+LYRVLL+ND+YTPM+FV+ VLQ +F K Sbjct: 2 RMTRRDGEGRTGTLERAGTREQTTTQRPRLYRVLLLNDDYTPMDFVVEVLQTYFRKSETE 61 Query: 90 AKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 A+ IML VHH+G G GVY ++AE KV QV ++R+ YPL+ + E + Sbjct: 62 AQLIMLAVHHKGQGVAGVYTRDVAETKVAQVTAHARRAGYPLRLVAEPE 110 >gi|90413212|ref|ZP_01221207.1| ATP-dependent Clp protease adaptor protein ClpS [Photobacterium profundum 3TCK] gi|90325764|gb|EAS42222.1| ATP-dependent Clp protease adaptor protein ClpS [Photobacterium profundum 3TCK] Length = 106 Score = 151 bits (383), Expect = 2e-35, Method: Composition-based stats. Identities = 44/93 (47%), Positives = 65/93 (69%) Query: 45 DSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGE 104 D + ++V+ P +Y+V+L ND+YTPM+FVI VLQ FF D E A +ML VH++G Sbjct: 13 DVLDKEEAQVKPPAMYKVVLNNDDYTPMDFVIEVLQKFFSMDMEKATQLMLNVHYEGKAI 72 Query: 105 CGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 CG + E+AE KV QVM ++R++++PL C ME+ Sbjct: 73 CGTFTAEVAETKVAQVMMHARENEHPLLCTMEK 105 >gi|261856347|ref|YP_003263630.1| ATP-dependent Clp protease adaptor protein ClpS [Halothiobacillus neapolitanus c2] gi|261836816|gb|ACX96583.1| ATP-dependent Clp protease adaptor protein ClpS [Halothiobacillus neapolitanus c2] Length = 104 Score = 151 bits (383), Expect = 2e-35, Method: Composition-based stats. Identities = 43/101 (42%), Positives = 66/101 (65%) Query: 37 IAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLK 96 + + D+E + V P +Y+V+L+ND++TPM+FVI +L FY E A+ +ML+ Sbjct: 1 MVDQITTTDTESIPEAIVAEPPMYQVILLNDDFTPMDFVIRILVELFYLSTEQAERVMLE 60 Query: 97 VHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 VHH+G G CG++ EIAE +V QV +RQ+ +PL C+ME Sbjct: 61 VHHKGRGVCGIFTREIAETRVAQVNQVARQNDHPLLCVMEP 101 >gi|329905634|ref|ZP_08274165.1| ATP-dependent Clp protease adaptor protein ClpS [Oxalobacteraceae bacterium IMCC9480] gi|327547556|gb|EGF32362.1| ATP-dependent Clp protease adaptor protein ClpS [Oxalobacteraceae bacterium IMCC9480] Length = 102 Score = 151 bits (383), Expect = 3e-35, Method: Composition-based stats. Identities = 45/90 (50%), Positives = 64/90 (71%) Query: 48 VRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGV 107 VR + K++ P +Y+V L+ND+YTPMEFV+ ++Q +F KD E A IML VH G G CGV Sbjct: 12 VRQTQKLKPPSMYQVYLLNDDYTPMEFVVAIIQEYFNKDRENATQIMLMVHRDGKGMCGV 71 Query: 108 YAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 Y +IA KV V+ ++R+ +PLQC+ME+ Sbjct: 72 YPKDIASTKVELVLTHARKAGHPLQCVMEE 101 >gi|56477975|ref|YP_159564.1| ATP-dependent Clp protease adaptor protein ClpS [Aromatoleum aromaticum EbN1] gi|67460190|sp|Q5P201|CLPS_AZOSE RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|56314018|emb|CAI08663.1| ATP-dependent Clp protease adaptor protein ClpS [Aromatoleum aromaticum EbN1] Length = 102 Score = 151 bits (383), Expect = 3e-35, Method: Composition-based stats. Identities = 45/88 (51%), Positives = 66/88 (75%) Query: 50 FSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYA 109 ++ + P LY+VLL+ND++TPM+FVI VLQ FF D E A +ML+VH +G+G CGV+ Sbjct: 14 EQTRTKPPPLYKVLLLNDDFTPMDFVIVVLQKFFGMDRERATRVMLQVHREGMGVCGVFP 73 Query: 110 YEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 ++A KV QV+ ++RQHQ+PL C+ME+ Sbjct: 74 KDVAATKVEQVVAFARQHQHPLACVMEE 101 >gi|304413815|ref|ZP_07395232.1| regulatory protein for ClpA substrate specificity [Candidatus Regiella insecticola LSR1] gi|304283535|gb|EFL91930.1| regulatory protein for ClpA substrate specificity [Candidatus Regiella insecticola LSR1] Length = 106 Score = 151 bits (382), Expect = 3e-35, Method: Composition-based stats. Identities = 45/97 (46%), Positives = 63/97 (64%) Query: 41 DNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQ 100 D + K++ P LY+V+L ND+YTPMEFVI VLQ FF D E A IML +H+Q Sbjct: 9 DVEHLVNEQQIDKLQPPSLYKVILNNDDYTPMEFVIDVLQKFFSYDIELATQIMLDIHYQ 68 Query: 101 GIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 G CGV+ E+AE KV V Y+R++++PL C +++ Sbjct: 69 GRAICGVFTAEVAETKVVLVNQYARKNEHPLLCTLKK 105 >gi|71278979|ref|YP_269595.1| ATP-dependent Clp protease adaptor protein ClpS [Colwellia psychrerythraea 34H] gi|123632117|sp|Q480C4|CLPS_COLP3 RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|71144719|gb|AAZ25192.1| ATP-dependent Clp protease adaptor protein ClpS [Colwellia psychrerythraea 34H] Length = 106 Score = 151 bits (382), Expect = 3e-35, Method: Composition-based stats. Identities = 45/98 (45%), Positives = 62/98 (63%) Query: 40 FDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHH 99 FD E ++ P Y V L+ND+YTPM+FV+ VL NFF K E A IML +H+ Sbjct: 8 FDTEGIVEESVKEQIEEPAKYYVFLLNDDYTPMDFVVDVLCNFFNKSEEQATDIMLTIHY 67 Query: 100 QGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +G CG Y EIAE KV QV+ Y+ ++Q+PL+C+M + Sbjct: 68 KGKALCGTYTAEIAETKVEQVVQYAFENQHPLKCVMTK 105 >gi|323697696|ref|ZP_08109608.1| ATP-dependent Clp protease adaptor protein ClpS [Desulfovibrio sp. ND132] gi|323457628|gb|EGB13493.1| ATP-dependent Clp protease adaptor protein ClpS [Desulfovibrio desulfuricans ND132] Length = 104 Score = 151 bits (382), Expect = 3e-35, Method: Composition-based stats. Identities = 43/94 (45%), Positives = 61/94 (64%) Query: 45 DSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGE 104 DSE+ +V+ PK Y+VLL ND+YT M+FV+ +L F++ A IML VH+QG G Sbjct: 11 DSELLGQHEVKEPKKYKVLLHNDDYTTMDFVVEILVRVFHRTEAQATAIMLSVHNQGYGV 70 Query: 105 CGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 CGVY E+AE KV+ V ++ +PL+C ME + Sbjct: 71 CGVYTAEVAETKVDLVHRLAKSAGFPLKCSMEGE 104 >gi|222111090|ref|YP_002553354.1| ATP-dependent clp protease adaptor protein clps [Acidovorax ebreus TPSY] gi|221730534|gb|ACM33354.1| ATP-dependent Clp protease adaptor protein ClpS [Acidovorax ebreus TPSY] Length = 122 Score = 151 bits (382), Expect = 3e-35, Method: Composition-based stats. Identities = 44/90 (48%), Positives = 63/90 (70%) Query: 48 VRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGV 107 R + K + P++Y+V+++ND+YTPMEFV+ VLQ FF KD E A IMLK+H G G CGV Sbjct: 31 ERRTQKTQPPQMYQVVMLNDDYTPMEFVVVVLQEFFNKDREAATQIMLKIHLDGKGVCGV 90 Query: 108 YAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 Y ++A KV+QV+ + + +PLQC+ E Sbjct: 91 YTRDVAATKVDQVLEAAHKAGHPLQCLSEP 120 >gi|298368623|ref|ZP_06979941.1| ATP-dependent Clp protease adaptor protein ClpS [Neisseria sp. oral taxon 014 str. F0314] gi|298282626|gb|EFI24113.1| ATP-dependent Clp protease adaptor protein ClpS [Neisseria sp. oral taxon 014 str. F0314] Length = 123 Score = 151 bits (381), Expect = 3e-35, Method: Composition-based stats. Identities = 46/113 (40%), Positives = 63/113 (55%), Gaps = 4/113 (3%) Query: 26 FMADSRMNKKGIA-EFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFY 84 F +MN+ + E D L+ R K PK Y V L+ND+YT M+FV+ VL F Sbjct: 13 FRTTYKMNRPNTSHESDTLLNENDR---KTAPPKRYGVFLLNDDYTTMDFVVEVLSEVFM 69 Query: 85 KDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 E A +ML VHH+G G CG Y +IA+ K QVM ++ +PLQC +E+ Sbjct: 70 LGEEQAVAVMLLVHHEGKGLCGTYTRDIAQTKQLQVMQRAKAAGHPLQCTVEE 122 >gi|152990128|ref|YP_001355850.1| ATP-dependent Clp protease, adaptor protein ClpS [Nitratiruptor sp. SB155-2] gi|151421989|dbj|BAF69493.1| ATP-dependent Clp protease, adaptor protein ClpS [Nitratiruptor sp. SB155-2] Length = 97 Score = 151 bits (381), Expect = 3e-35, Method: Composition-based stats. Identities = 43/94 (45%), Positives = 64/94 (68%) Query: 45 DSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGE 104 E + K+ PK Y+V L+ND+YT M+FV+ +L + F K +E A IML +H QG G Sbjct: 4 KVETKEVVKLEEPKKYKVFLLNDDYTTMDFVVDILCDIFDKSYEEAVNIMLTIHRQGKGL 63 Query: 105 CGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 CG+Y YEIAE K++QV +R H++PL+ +ME++ Sbjct: 64 CGIYTYEIAETKIDQVHRLARAHEFPLKAVMEEE 97 >gi|54308344|ref|YP_129364.1| ATP-dependent Clp protease adaptor protein ClpS [Photobacterium profundum SS9] gi|67460286|sp|Q6LT14|CLPS_PHOPR RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|46912772|emb|CAG19562.1| conserved hypothetical protein [Photobacterium profundum SS9] Length = 106 Score = 151 bits (381), Expect = 3e-35, Method: Composition-based stats. Identities = 44/93 (47%), Positives = 64/93 (68%) Query: 45 DSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGE 104 D + +V+ P +Y+V+L ND+YTPM+FVI VLQ FF D E A +ML VH++G Sbjct: 13 DVLDKEEVQVKPPAMYKVVLNNDDYTPMDFVIEVLQKFFSMDMEKATQLMLNVHYEGKAI 72 Query: 105 CGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 CG + E+AE KV QVM ++R++++PL C ME+ Sbjct: 73 CGTFTAEVAETKVAQVMMHARENEHPLLCTMEK 105 >gi|171464059|ref|YP_001798172.1| ATP-dependent Clp protease adaptor protein ClpS [Polynucleobacter necessarius subsp. necessarius STIR1] gi|171193597|gb|ACB44558.1| ATP-dependent Clp protease adaptor protein ClpS [Polynucleobacter necessarius subsp. necessarius STIR1] Length = 118 Score = 151 bits (381), Expect = 3e-35, Method: Composition-based stats. Identities = 47/90 (52%), Positives = 67/90 (74%) Query: 48 VRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGV 107 + +V+VP +Y+VLL+ND+YTPMEFV+ V+Q +F KD+ETA IML+VH G G CGV Sbjct: 28 EKQVEQVKVPSMYKVLLLNDDYTPMEFVVMVIQEYFNKDYETATRIMLQVHLVGKGACGV 87 Query: 108 YAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 + ++A KV+QV+ SR+ +PLQC ME+ Sbjct: 88 FTRDVAATKVHQVIELSREAGHPLQCTMEE 117 >gi|319793921|ref|YP_004155561.1| ATP-dependent clp protease adaptor protein clps [Variovorax paradoxus EPS] gi|315596384|gb|ADU37450.1| ATP-dependent Clp protease adaptor protein ClpS [Variovorax paradoxus EPS] Length = 119 Score = 151 bits (381), Expect = 4e-35, Method: Composition-based stats. Identities = 50/110 (45%), Positives = 69/110 (62%), Gaps = 2/110 (1%) Query: 28 ADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDH 87 K + D+ + R K P++Y+V+++ND+YTPMEFVI VLQ +F KD Sbjct: 10 PTPPAQKPAGDDGDSVVL--ERRPQKTAPPQMYQVVMLNDDYTPMEFVIVVLQEYFSKDR 67 Query: 88 ETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 ETA IMLK+H G G CGVY+ ++A KVNQVM ++Q +PLQC+ E Sbjct: 68 ETATQIMLKIHLDGRGVCGVYSRDMAATKVNQVMEAAQQAGHPLQCVSEP 117 >gi|289679172|ref|ZP_06500062.1| ATP-dependent Clp protease adaptor protein ClpS [Pseudomonas syringae pv. syringae FF5] Length = 94 Score = 151 bits (381), Expect = 4e-35, Method: Composition-based stats. Identities = 38/89 (42%), Positives = 58/89 (65%) Query: 49 RFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVY 108 ++ P +Y+V+L ND+YTPM+FV+ VL+ FF + E A +ML VH +G CG++ Sbjct: 4 DAKPALQAPPMYKVVLFNDDYTPMDFVVEVLEVFFNLNRELATKVMLAVHTEGRAVCGLF 63 Query: 109 AYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +IAE K QV Y+R+ Q+PL C +E+ Sbjct: 64 TRDIAETKAMQVNQYARESQHPLLCEIEK 92 >gi|241763390|ref|ZP_04761445.1| ATP-dependent Clp protease adaptor protein ClpS [Acidovorax delafieldii 2AN] gi|241367432|gb|EER61743.1| ATP-dependent Clp protease adaptor protein ClpS [Acidovorax delafieldii 2AN] Length = 122 Score = 151 bits (381), Expect = 4e-35, Method: Composition-based stats. Identities = 50/100 (50%), Positives = 69/100 (69%) Query: 38 AEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKV 97 A+ D R + KVR P++Y+V+++ND+YTPMEFVI VLQ FF KD ETA IMLK+ Sbjct: 21 AQDDGGSVVLERRAQKVRPPQMYQVVMLNDDYTPMEFVIVVLQEFFNKDRETATQIMLKI 80 Query: 98 HHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 H G G CGVY+ ++A KV+QV+ + + +PLQC+ E Sbjct: 81 HLDGKGICGVYSRDVAATKVDQVLEAALKAGHPLQCVSEP 120 >gi|115376673|ref|ZP_01463901.1| ATP-dependent Clp protease adaptor protein ClpS [Stigmatella aurantiaca DW4/3-1] gi|310823925|ref|YP_003956283.1| ATP-dependent CLP protease, adapter protein CLPs [Stigmatella aurantiaca DW4/3-1] gi|115366290|gb|EAU65297.1| ATP-dependent Clp protease adaptor protein ClpS [Stigmatella aurantiaca DW4/3-1] gi|309396997|gb|ADO74456.1| ATP-dependent Clp protease, adapter protein ClpS [Stigmatella aurantiaca DW4/3-1] Length = 107 Score = 151 bits (381), Expect = 4e-35, Method: Composition-based stats. Identities = 47/100 (47%), Positives = 62/100 (62%) Query: 39 EFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVH 98 E D + +E R K++ P LY+VLL NDNYT EFV+ VL+ F+K A IML VH Sbjct: 6 ENDENVVTETRPEKKLKKPTLYKVLLHNDNYTTREFVVAVLKEIFHKSEGDAVQIMLHVH 65 Query: 99 HQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 + GIG GVY YE+AE K+ V +R + YPL+ ME + Sbjct: 66 YNGIGVAGVYTYEVAETKIKTVEAAARDNGYPLRLSMEPE 105 >gi|94987059|ref|YP_594992.1| hypothetical protein LI0617 [Lawsonia intracellularis PHE/MN1-00] gi|229889821|sp|Q1MQQ6|CLPS_LAWIP RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|94731308|emb|CAJ54671.1| uncharacterized conserved protein [Lawsonia intracellularis PHE/MN1-00] Length = 109 Score = 151 bits (381), Expect = 4e-35, Method: Composition-based stats. Identities = 45/106 (42%), Positives = 62/106 (58%) Query: 32 MNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAK 91 M + + E+ K+R PK+Y+VLL NDNYT MEFV+ +L F K E A Sbjct: 1 MTQSSYNPIEQEGSPELLLQEKIRRPKMYQVLLHNDNYTTMEFVVSILMKIFRKTMEQAT 60 Query: 92 CIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 IML VH +GIG GVY E+AE KVN +R+ +PL+C +++ Sbjct: 61 SIMLSVHRKGIGVAGVYTRELAETKVNTTHMLAREAGFPLRCTLQE 106 >gi|121611395|ref|YP_999202.1| ATP-dependent Clp protease adaptor protein ClpS [Verminephrobacter eiseniae EF01-2] gi|158514006|sp|A1WRC7|CLPS_VEREI RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|121556035|gb|ABM60184.1| ATP-dependent Clp protease adaptor protein ClpS [Verminephrobacter eiseniae EF01-2] Length = 119 Score = 151 bits (381), Expect = 4e-35, Method: Composition-based stats. Identities = 47/97 (48%), Positives = 66/97 (68%) Query: 41 DNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQ 100 D R K P++Y+V+++ND+YTPMEFVI VLQ FF KD ETA IMLK+H Sbjct: 21 DGGAVVLERRPEKTPPPQMYQVVMLNDDYTPMEFVIVVLQEFFSKDRETATRIMLKIHLD 80 Query: 101 GIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 G G CGVY++++A KV+QV++ + + +PLQC+ E Sbjct: 81 GKGICGVYSHDVAATKVDQVLDAALKAGHPLQCVSEP 117 >gi|121601730|ref|YP_988887.1| ATP-dependent Clp protease adaptor protein ClpS [Bartonella bacilliformis KC583] gi|120613907|gb|ABM44508.1| ATP-dependent Clp protease adaptor protein ClpS [Bartonella bacilliformis KC583] Length = 92 Score = 150 bits (380), Expect = 4e-35, Method: Composition-based stats. Identities = 52/90 (57%), Positives = 72/90 (80%) Query: 49 RFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVY 108 + K++ PKLYRVLL++D+YTPM+FV+ +L+NFF K+ E A IML +HH GIGECG Y Sbjct: 3 QVRQKLQKPKLYRVLLLDDDYTPMDFVVFILKNFFKKNFEEATRIMLNIHHNGIGECGTY 62 Query: 109 AYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 YE+AEMK+ QVM +RQ+++PLQC++E K Sbjct: 63 TYEVAEMKIVQVMECARQNEHPLQCVIEAK 92 >gi|85858021|ref|YP_460223.1| ATP-dependent Clp protease adaptor protein [Syntrophus aciditrophicus SB] gi|123515753|sp|Q2LQK8|CLPS_SYNAS RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|85721112|gb|ABC76055.1| ATP-dependent Clp protease adaptor protein [Syntrophus aciditrophicus SB] Length = 107 Score = 150 bits (380), Expect = 5e-35, Method: Composition-based stats. Identities = 47/101 (46%), Positives = 66/101 (65%), Gaps = 2/101 (1%) Query: 37 IAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLK 96 I FD L+ E + KV P++YRV+L ND+YT M+FV+ +L F+K A IML Sbjct: 8 IKNFDQELNIE--WEDKVMEPRMYRVILHNDHYTTMDFVVQILMTIFHKPAAQATRIMLD 65 Query: 97 VHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 VH +G G CGVY Y+IA K+ QV +RQ++YPL+C M++ Sbjct: 66 VHRKGQGVCGVYTYDIASTKIAQVHFMARQNEYPLRCSMDE 106 >gi|114778159|ref|ZP_01453046.1| hypothetical protein SPV1_00837 [Mariprofundus ferrooxydans PV-1] gi|114551577|gb|EAU54131.1| hypothetical protein SPV1_00837 [Mariprofundus ferrooxydans PV-1] Length = 112 Score = 150 bits (380), Expect = 5e-35, Method: Composition-based stats. Identities = 41/104 (39%), Positives = 66/104 (63%), Gaps = 1/104 (0%) Query: 35 KGIAEFDNCLDSEVRF-SSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCI 93 I D+ + E +++ P ++R+L++ND++TPM+FV+ VL FF+K TA + Sbjct: 2 TEITTPDSVRNPETETAEPQLQPPPMFRILMLNDDFTPMDFVVDVLIRFFHKSEATANQL 61 Query: 94 MLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 ML++H +G CG+Y +IAE K+ QV SR +PL+CIME+ Sbjct: 62 MLQIHLEGRAMCGIYPRDIAETKLQQVEAASRTSGHPLRCIMEK 105 >gi|218885563|ref|YP_002434884.1| ATP-dependent Clp protease adaptor protein ClpS [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|226706562|sp|B8DJU4|CLPS_DESVM RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|218756517|gb|ACL07416.1| ATP-dependent Clp protease adaptor protein ClpS [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 100 Score = 150 bits (380), Expect = 5e-35, Method: Composition-based stats. Identities = 45/98 (45%), Positives = 64/98 (65%) Query: 40 FDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHH 99 D D+E+ +VR P+++RVLL ND+YT MEFV+ +L F + + A IML VH Sbjct: 2 PDGGRDTELLIEDEVREPRMFRVLLHNDDYTTMEFVVSILIEVFRRTPDEATRIMLAVHE 61 Query: 100 QGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +G+GECGVY E+AE KV V +R+ YPL+C +E+ Sbjct: 62 KGVGECGVYTAEVAETKVALVHARARREGYPLRCTLEE 99 >gi|302879452|ref|YP_003848016.1| ATP-dependent Clp protease adaptor protein ClpS [Gallionella capsiferriformans ES-2] gi|302582241|gb|ADL56252.1| ATP-dependent Clp protease adaptor protein ClpS [Gallionella capsiferriformans ES-2] Length = 102 Score = 150 bits (380), Expect = 5e-35, Method: Composition-based stats. Identities = 40/84 (47%), Positives = 60/84 (71%) Query: 54 VRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIA 113 + P +Y+V+L ND+YT MEFVI VLQ FF ++E A+ +ML++H+ G CGVY ++A Sbjct: 18 TKPPGMYKVVLYNDDYTTMEFVIDVLQRFFAINNERAQQLMLQIHNNGSATCGVYTRDVA 77 Query: 114 EMKVNQVMNYSRQHQYPLQCIMEQ 137 E KV QV Y++Q+ +PL+C E+ Sbjct: 78 ETKVAQVTEYAQQNGHPLRCGTEE 101 >gi|46580012|ref|YP_010820.1| ATP-dependent Clp protease adaptor protein ClpS [Desulfovibrio vulgaris str. Hildenborough] gi|120602577|ref|YP_966977.1| ATP-dependent Clp protease adaptor protein ClpS [Desulfovibrio vulgaris DP4] gi|67460332|sp|Q72BN4|CLPS_DESVH RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|166214734|sp|A1VDN4|CLPS_DESVV RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|46449428|gb|AAS96079.1| ATP-dependent Clp protease adaptor protein ClpS [Desulfovibrio vulgaris str. Hildenborough] gi|120562806|gb|ABM28550.1| ATP-dependent Clp protease adaptor protein ClpS [Desulfovibrio vulgaris DP4] gi|311233989|gb|ADP86843.1| ATP-dependent Clp protease adaptor protein ClpS [Desulfovibrio vulgaris RCH1] Length = 104 Score = 150 bits (380), Expect = 5e-35, Method: Composition-based stats. Identities = 46/95 (48%), Positives = 61/95 (64%) Query: 43 CLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGI 102 DS++ VR+P++YRVLL ND+YT MEFV+ +L F K E A IML VH G+ Sbjct: 9 GYDSDILVEDDVRLPRMYRVLLHNDDYTTMEFVVSILVEVFRKTAEQATAIMLAVHRDGV 68 Query: 103 GECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 GECGVY +E+AE K V +R+ YPL+C E+ Sbjct: 69 GECGVYTFEVAETKAAIVHARARREGYPLRCSTEE 103 >gi|149919976|ref|ZP_01908451.1| ATP-dependent Clp protease adaptor protein clpS [Plesiocystis pacifica SIR-1] gi|149819249|gb|EDM78683.1| ATP-dependent Clp protease adaptor protein clpS [Plesiocystis pacifica SIR-1] Length = 113 Score = 150 bits (379), Expect = 6e-35, Method: Composition-based stats. Identities = 44/107 (41%), Positives = 64/107 (59%) Query: 32 MNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAK 91 M+ K + + + R K + P++YRVLL ND+YTPM+FV+ +LQ F A Sbjct: 1 MSDKRKDDPQRGVALKTRDERKSKRPRMYRVLLHNDDYTPMDFVVRLLQTVFRHSEGRAT 60 Query: 92 CIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 IML VH++G+G GV+ +EIAE KV Q +RQ++ PL ME + Sbjct: 61 EIMLHVHNKGVGVAGVFTHEIAETKVAQTHMLARQNECPLMASMEPE 107 >gi|120554676|ref|YP_959027.1| ATP-dependent Clp protease adaptor protein ClpS [Marinobacter aquaeolei VT8] gi|158513045|sp|A1U1H1|CLPS_MARAV RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|120324525|gb|ABM18840.1| ATP-dependent Clp protease adaptor protein ClpS [Marinobacter aquaeolei VT8] Length = 119 Score = 150 bits (379), Expect = 6e-35, Method: Composition-based stats. Identities = 41/88 (46%), Positives = 56/88 (63%) Query: 50 FSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYA 109 ++ P YRV+L+ND+YTPM+FV+ VL FF + E A +ML VH QG CGVY Sbjct: 30 EKPALKRPARYRVVLLNDDYTPMDFVVDVLMKFFAMNEEKATQVMLLVHTQGKAVCGVYT 89 Query: 110 YEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +IAE K QV YS + ++PL C +E+ Sbjct: 90 RDIAETKAAQVNQYSSECEHPLLCEIER 117 >gi|297570438|ref|YP_003691782.1| ATP-dependent Clp protease adaptor protein ClpS [Desulfurivibrio alkaliphilus AHT2] gi|296926353|gb|ADH87163.1| ATP-dependent Clp protease adaptor protein ClpS [Desulfurivibrio alkaliphilus AHT2] Length = 105 Score = 150 bits (379), Expect = 6e-35, Method: Composition-based stats. Identities = 42/104 (40%), Positives = 67/104 (64%) Query: 35 KGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIM 94 +++ LD+ R ++R P Y+VLL ND+YT M+FV+ VL+ F D ++A IM Sbjct: 2 SNMSQDQTGLDAVTREEQELRQPPRYKVLLHNDDYTTMDFVVTVLETVFKHDTDSAHRIM 61 Query: 95 LKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 + VH +G+G GVY ++AE K V N +R+H+YPL+C +E++ Sbjct: 62 MSVHKEGVGVAGVYPRDVAETKSAMVHNLARKHEYPLKCSLERE 105 >gi|298530330|ref|ZP_07017732.1| ATP-dependent Clp protease adaptor protein ClpS [Desulfonatronospira thiodismutans ASO3-1] gi|298509704|gb|EFI33608.1| ATP-dependent Clp protease adaptor protein ClpS [Desulfonatronospira thiodismutans ASO3-1] Length = 104 Score = 150 bits (379), Expect = 7e-35, Method: Composition-based stats. Identities = 43/98 (43%), Positives = 58/98 (59%) Query: 40 FDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHH 99 +++ P+ Y+VLL ND+YT MEFV+HVLQ F+K A IML VH Sbjct: 6 TGTLPSPGTVSEEEIKEPQRYKVLLHNDDYTTMEFVVHVLQKVFHKTESEAMHIMLSVHK 65 Query: 100 QGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 G G CG+Y E+AE KV V + +R+ YPL+C ME+ Sbjct: 66 NGTGVCGIYTGEVAETKVAMVTSMARKKGYPLKCTMEE 103 >gi|126667265|ref|ZP_01738238.1| ATP-dependent Clp protease adaptor protein ClpS [Marinobacter sp. ELB17] gi|126628210|gb|EAZ98834.1| ATP-dependent Clp protease adaptor protein ClpS [Marinobacter sp. ELB17] Length = 117 Score = 150 bits (379), Expect = 7e-35, Method: Composition-based stats. Identities = 42/107 (39%), Positives = 62/107 (57%), Gaps = 1/107 (0%) Query: 32 MNKKGIAEFDNCLDSEVR-FSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETA 90 N+ +E + ++ P +RV+L+ND+YTPM+FV+ VL FF + E A Sbjct: 9 WNQGDESEPGRHDQLSLAPEKPALKRPAQFRVILLNDDYTPMDFVVEVLTTFFGMNEEKA 68 Query: 91 KCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +ML VH QG CGVY+ +IAE K QV +YS + +PL C +E+ Sbjct: 69 TQVMLLVHTQGKAVCGVYSRDIAETKAAQVNHYSSECDHPLLCEIER 115 >gi|262402498|ref|ZP_06079059.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio sp. RC586] gi|262351280|gb|EEZ00413.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio sp. RC586] Length = 106 Score = 150 bits (379), Expect = 7e-35, Method: Composition-based stats. Identities = 44/95 (46%), Positives = 62/95 (65%) Query: 43 CLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGI 102 D + + V+ P +Y V+L ND+YT M+FVI +L+ FF D E A +MLKVH++G Sbjct: 11 DFDLLEKEKTAVKPPSMYHVVLNNDDYTSMDFVIEILERFFSMDIERATQVMLKVHYEGK 70 Query: 103 GECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 CG + E+AE KV QV YSR++++PL C MEQ Sbjct: 71 AICGTFTAEVAETKVAQVTMYSRENEHPLLCTMEQ 105 >gi|260779177|ref|ZP_05888069.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio coralliilyticus ATCC BAA-450] gi|260605341|gb|EEX31636.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio coralliilyticus ATCC BAA-450] Length = 106 Score = 150 bits (379), Expect = 7e-35, Method: Composition-based stats. Identities = 44/93 (47%), Positives = 63/93 (67%) Query: 45 DSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGE 104 D +KV+ P +Y V+L ND+YTPM+FVI +L+ FF D + A +MLKVH++G Sbjct: 13 DLLELEKTKVKPPSMYNVVLNNDDYTPMDFVIEILERFFSMDIDKATQVMLKVHYEGKAI 72 Query: 105 CGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 CG + E+AE KV QV YS+++++PL C MEQ Sbjct: 73 CGTFTAEVAETKVAQVTMYSQENEHPLLCTMEQ 105 >gi|89092941|ref|ZP_01165893.1| ATP-dependent Clp protease adaptor protein ClpS [Oceanospirillum sp. MED92] gi|89082966|gb|EAR62186.1| ATP-dependent Clp protease adaptor protein ClpS [Oceanospirillum sp. MED92] Length = 120 Score = 150 bits (379), Expect = 7e-35, Method: Composition-based stats. Identities = 43/113 (38%), Positives = 71/113 (62%), Gaps = 3/113 (2%) Query: 25 IFMADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFY 84 I M++ +++ + D+ L +E +++ P +YRV+L+ND+YTPM+FV+ VL FF Sbjct: 10 IRMSNEDEHEE--FDHDHGLATE-EAKPELKKPSMYRVVLMNDDYTPMDFVVAVLMMFFS 66 Query: 85 KDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 D E A +ML VH QG G CG++ ++A+ K V Y+R + +PL C +E+ Sbjct: 67 MDQEKATQVMLAVHTQGKGVCGIFTRDVADTKAAIVNQYARDNSHPLLCEVEK 119 >gi|254496296|ref|ZP_05109183.1| conserved hypothetical protein [Legionella drancourtii LLAP12] gi|254354484|gb|EET13132.1| conserved hypothetical protein [Legionella drancourtii LLAP12] Length = 107 Score = 149 bits (378), Expect = 9e-35, Method: Composition-based stats. Identities = 46/107 (42%), Positives = 70/107 (65%) Query: 32 MNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAK 91 M+ + I E +E ++ ++P+ YRV+L+ND+YTPM+FV+ VL++FF+ E A Sbjct: 1 MSGQNIEEIVRHKVAEPEVRTENKLPRKYRVVLLNDDYTPMDFVVDVLKHFFHLSEEMAV 60 Query: 92 CIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 +ML+VH QG G CGV+ +IAE KV V Y+R +Q+PL ME + Sbjct: 61 QVMLQVHIQGKGVCGVFTRDIAETKVALVNEYARMNQHPLLSSMEPE 107 >gi|254524583|ref|ZP_05136638.1| ATP-dependent Clp protease adaptor protein ClpS [Stenotrophomonas sp. SKA14] gi|219722174|gb|EED40699.1| ATP-dependent Clp protease adaptor protein ClpS [Stenotrophomonas sp. SKA14] Length = 85 Score = 149 bits (378), Expect = 9e-35, Method: Composition-based stats. Identities = 44/82 (53%), Positives = 58/82 (70%) Query: 56 VPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEM 115 P Y+V+L+ND+YTPM+FV+ VLQ FF D + A +ML VH +G G CGV+ E+AE Sbjct: 3 PPPFYQVMLLNDDYTPMDFVVDVLQQFFSMDLDKATQVMLHVHTRGRGVCGVFTREVAET 62 Query: 116 KVNQVMNYSRQHQYPLQCIMEQ 137 KV QV YSR +Q+PL C ME+ Sbjct: 63 KVAQVNEYSRMNQHPLLCTMEK 84 >gi|317487405|ref|ZP_07946193.1| ATP-dependent Clp protease adaptor protein ClpS [Bilophila wadsworthia 3_1_6] gi|316921337|gb|EFV42635.1| ATP-dependent Clp protease adaptor protein ClpS [Bilophila wadsworthia 3_1_6] Length = 108 Score = 149 bits (378), Expect = 9e-35, Method: Composition-based stats. Identities = 42/93 (45%), Positives = 61/93 (65%) Query: 45 DSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGE 104 +V +V PK+Y+VLL ND+YT MEFV+++L F+K + A IML VH +G G Sbjct: 13 QPDVIMDVEVAEPKMYQVLLHNDDYTTMEFVVNILMTVFHKTADQATNIMLAVHKRGKGI 72 Query: 105 CGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 GVY +EIAE KV++ +R+ YPL+C +E+ Sbjct: 73 AGVYPHEIAETKVDKTHFLAREAGYPLRCTLEE 105 >gi|261252480|ref|ZP_05945053.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio orientalis CIP 102891] gi|260935871|gb|EEX91860.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio orientalis CIP 102891] Length = 106 Score = 149 bits (377), Expect = 1e-34, Method: Composition-based stats. Identities = 44/93 (47%), Positives = 62/93 (66%) Query: 45 DSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGE 104 D +KV+ P +Y V+L ND+YTPM+FVI +L+ FF D + A +ML+VH++G Sbjct: 13 DLLELEKTKVKPPSMYNVVLNNDDYTPMDFVIEILERFFSMDIDKATQVMLQVHYEGKAI 72 Query: 105 CGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 CG Y E+AE KV QV YS ++++PL C MEQ Sbjct: 73 CGTYTAEVAETKVAQVTMYSTENEHPLLCTMEQ 105 >gi|320335153|ref|YP_004171864.1| ATP-dependent Clp protease adapter protein clpS [Deinococcus maricopensis DSM 21211] gi|319756442|gb|ADV68199.1| ATP-dependent Clp protease adapter protein clpS [Deinococcus maricopensis DSM 21211] Length = 114 Score = 149 bits (377), Expect = 1e-34, Method: Composition-based stats. Identities = 43/99 (43%), Positives = 63/99 (63%) Query: 40 FDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHH 99 D+ +++ ++ P+ Y VLL+ND+YTPM+FV++VL++ F +D A IML VHH Sbjct: 8 PDSGAGTQLAQRPRLARPRRYTVLLLNDDYTPMDFVVYVLEHHFGRDEPDATRIMLAVHH 67 Query: 100 QGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 QG G GVY E+AE KV QV +R YPL+ + E + Sbjct: 68 QGRGVAGVYTREVAETKVAQVTRLARAQGYPLELLAEPE 106 >gi|284007607|emb|CBA73211.1| ATP-dependent Clp protease adaptor protein [Arsenophonus nasoniae] Length = 89 Score = 149 bits (377), Expect = 1e-34, Method: Composition-based stats. Identities = 42/88 (47%), Positives = 59/88 (67%) Query: 50 FSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYA 109 ++ P +Y+V+L ND++TPM+FV+ VL+ +F D E A IML VH G G CGVY Sbjct: 1 MEHALQPPSMYKVILNNDDFTPMDFVVQVLKKYFSFDEEQATQIMLDVHFHGKGICGVYT 60 Query: 110 YEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 E+AE K QV Y+R+H+YPL C +E+ Sbjct: 61 AEVAETKAAQVNIYAREHEYPLLCTIEE 88 >gi|42522812|ref|NP_968192.1| hypothetical protein Bd1289 [Bdellovibrio bacteriovorus HD100] gi|67460291|sp|Q6MNG7|CLPS_BDEBA RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|39574008|emb|CAE79185.1| conserved hypothetical protein [Bdellovibrio bacteriovorus HD100] Length = 114 Score = 149 bits (376), Expect = 1e-34, Method: Composition-based stats. Identities = 45/94 (47%), Positives = 68/94 (72%) Query: 45 DSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGE 104 ++ V+ K+ PK+Y+V+L+ND+YTPM+FV+ VL+ FF K E A IML VH +G G Sbjct: 20 EAGVQLVPKLDTPKMYKVILLNDDYTPMDFVVLVLRRFFAKTEEQATEIMLDVHKKGAGV 79 Query: 105 CGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 GV++ EIAEMKV QV +++ +QYPL+ +E++ Sbjct: 80 AGVFSLEIAEMKVMQVNQFAQLNQYPLKSTLEEE 113 >gi|95930477|ref|ZP_01313213.1| ATP-dependent Clp protease adaptor protein ClpS [Desulfuromonas acetoxidans DSM 684] gi|95133517|gb|EAT15180.1| ATP-dependent Clp protease adaptor protein ClpS [Desulfuromonas acetoxidans DSM 684] Length = 103 Score = 149 bits (376), Expect = 1e-34, Method: Composition-based stats. Identities = 39/98 (39%), Positives = 56/98 (57%) Query: 40 FDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHH 99 + EV + P Y V++ ND+YT MEFV+ VL+N + K A IML +HH Sbjct: 5 TQTTPEGEVLSKEQTARPPRYNVIMHNDDYTTMEFVVEVLENIYRKQPAEATRIMLAIHH 64 Query: 100 QGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +G+ CG Y +EIAE KV Q +R +PL+C +E+ Sbjct: 65 EGLAVCGNYPFEIAETKVEQTHRRARSAGHPLRCSIEE 102 >gi|148261822|ref|YP_001235949.1| ATP-dependent Clp protease adaptor protein ClpS [Acidiphilium cryptum JF-5] gi|146403503|gb|ABQ32030.1| ATP-dependent Clp protease adaptor protein ClpS [Acidiphilium cryptum JF-5] Length = 147 Score = 149 bits (376), Expect = 1e-34, Method: Composition-based stats. Identities = 43/106 (40%), Positives = 69/106 (65%), Gaps = 4/106 (3%) Query: 36 GIAEFDNCLDSE----VRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAK 91 G+ +FD + + ++ + P LYRV++ ND+YTPMEFV+ L F K + A Sbjct: 41 GMDDFDGQDGMDPVFATQARARAKRPPLYRVMMFNDDYTPMEFVVATLVGLFGKTTDEAG 100 Query: 92 CIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 I L++H +G+G CG++ YEIAE K+ QV+ +R++Q+PLQC++E Sbjct: 101 RIALRIHRRGVGVCGIFTYEIAETKMIQVLELARENQHPLQCMIEP 146 >gi|49475405|ref|YP_033446.1| hypothetical protein BH06170 [Bartonella henselae str. Houston-1] gi|49238211|emb|CAF27421.1| hypothetical protein BH06170 [Bartonella henselae str. Houston-1] Length = 123 Score = 149 bits (376), Expect = 2e-34, Method: Composition-based stats. Identities = 57/113 (50%), Positives = 80/113 (70%), Gaps = 2/113 (1%) Query: 26 FMADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYK 85 FM + + K E+ + + SK++ PKLYRVLL++D+YTPM+FVI VL++FF K Sbjct: 13 FMHNEK--GKNGDEYRHDAFIMPKMRSKLQKPKLYRVLLLDDDYTPMDFVIFVLKSFFKK 70 Query: 86 DHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 + E A IML VH G+GECG+Y YE+AEMK+ QV +RQ+++PLQC+ME K Sbjct: 71 NFEEAMHIMLSVHQNGVGECGIYNYEVAEMKIIQVRECARQNEHPLQCVMEWK 123 >gi|332039758|gb|EGI76158.1| ATP-dependent Clp protease adaptor protein ClpS [Hylemonella gracilis ATCC 19624] Length = 126 Score = 149 bits (376), Expect = 2e-34, Method: Composition-based stats. Identities = 44/90 (48%), Positives = 65/90 (72%) Query: 48 VRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGV 107 R KV+ P++++V+++ND+YTPMEFV+ V+Q +F KD ETA IMLK+H G G CGV Sbjct: 35 ERRPQKVQPPQMFQVVMLNDDYTPMEFVVVVIQEYFNKDLETATQIMLKIHLDGRGICGV 94 Query: 108 YAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 Y ++A KV+QV+ +R+ +PLQC+ E Sbjct: 95 YTKDVAATKVDQVLEAARKAGHPLQCVAEP 124 >gi|237749126|ref|ZP_04579606.1| ATP-dependent Clp protease adaptor protein ClpS [Oxalobacter formigenes OXCC13] gi|229380488|gb|EEO30579.1| ATP-dependent Clp protease adaptor protein ClpS [Oxalobacter formigenes OXCC13] Length = 102 Score = 149 bits (376), Expect = 2e-34, Method: Composition-based stats. Identities = 44/90 (48%), Positives = 66/90 (73%) Query: 48 VRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGV 107 + ++ ++ P +Y+V+L+ND++TPMEFVI VLQ +F+KD E A IMLKVHH+G G CG+ Sbjct: 12 EKEAAILKAPPMYKVVLLNDDFTPMEFVISVLQEYFFKDREAATRIMLKVHHEGKGICGI 71 Query: 108 YAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 + +IA KV V+ ++R +PLQC ME+ Sbjct: 72 FPKDIANTKVELVLKHARGEGHPLQCTMEE 101 >gi|116328081|ref|YP_797801.1| hypothetical protein LBL_1378 [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116331466|ref|YP_801184.1| hypothetical protein LBJ_1906 [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|122280789|sp|Q04RP4|CLPS_LEPBJ RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|122284127|sp|Q051X7|CLPS_LEPBL RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|116120825|gb|ABJ78868.1| conserved hypothetical protein [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116125155|gb|ABJ76426.1| conserved hypothetical protein [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 108 Score = 149 bits (376), Expect = 2e-34, Method: Composition-based stats. Identities = 42/104 (40%), Positives = 63/104 (60%) Query: 35 KGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIM 94 I FD + + K++ P YRV+++ND++TPMEFV+ +LQ F++ ++ IM Sbjct: 2 SDIFRFDTEEQTLTKEKVKLKRPSKYRVIILNDDFTPMEFVVWILQFVFHRSRAQSQQIM 61 Query: 95 LKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 LK H G CGVY++++A KV QV + QH YPL C ME + Sbjct: 62 LKAHITGKALCGVYSHDVARTKVIQVQQLAEQHGYPLHCTMEVE 105 >gi|293606229|ref|ZP_06688592.1| ATP-dependent Clp protease adaptor protein ClpS [Achromobacter piechaudii ATCC 43553] gi|292815376|gb|EFF74494.1| ATP-dependent Clp protease adaptor protein ClpS [Achromobacter piechaudii ATCC 43553] Length = 104 Score = 148 bits (375), Expect = 2e-34, Method: Composition-based stats. Identities = 46/79 (58%), Positives = 61/79 (77%) Query: 59 LYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVN 118 +Y+VLL+ND+YTPMEFV+ VLQ FF K+HE A IML+VHH+G G CGVY ++A ++ Sbjct: 25 MYQVLLLNDDYTPMEFVVKVLQKFFNKNHEEATRIMLQVHHEGRGVCGVYPRDLAATRIA 84 Query: 119 QVMNYSRQHQYPLQCIMEQ 137 QV Y+R Q+PLQC+ME Sbjct: 85 QVGQYARARQHPLQCVMEP 103 >gi|304311206|ref|YP_003810804.1| ATP-dependent Clp protease adaptor protein [gamma proteobacterium HdN1] gi|301796939|emb|CBL45152.1| ATP-dependent Clp protease adaptor protein [gamma proteobacterium HdN1] Length = 120 Score = 148 bits (375), Expect = 2e-34, Method: Composition-based stats. Identities = 48/117 (41%), Positives = 73/117 (62%), Gaps = 5/117 (4%) Query: 21 LMSFIFMADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQ 80 L+ MA N+ + E + L S++V P +++VL++ND+YTPMEFV+ VLQ Sbjct: 8 LLPLQMMA----NRPSVTEAEGDLAVR-EASAEVAPPPMFQVLMLNDDYTPMEFVVEVLQ 62 Query: 81 NFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 FF + E A +ML VH +G CGV+ ++AE K QVM Y+R++Q+PL C +E+ Sbjct: 63 RFFGMNREAATQVMLIVHTKGQASCGVFTKDVAETKAMQVMKYARENQHPLMCRIER 119 >gi|311107314|ref|YP_003980167.1| ATP-dependent Clp protease adaptor protein ClpS [Achromobacter xylosoxidans A8] gi|310762003|gb|ADP17452.1| ATP-dependent Clp protease adaptor protein ClpS [Achromobacter xylosoxidans A8] gi|317407691|gb|EFV87624.1| ATP-dependent Clp protease adapter protein ClpS [Achromobacter xylosoxidans C54] Length = 104 Score = 148 bits (375), Expect = 2e-34, Method: Composition-based stats. Identities = 46/79 (58%), Positives = 61/79 (77%) Query: 59 LYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVN 118 +Y+VLL+ND+YTPMEFV+ VLQ FF K+HE A IML+VHH+G G CGVY ++A ++ Sbjct: 25 MYQVLLLNDDYTPMEFVVKVLQKFFNKNHEEATRIMLQVHHEGRGVCGVYPRDLAATRIA 84 Query: 119 QVMNYSRQHQYPLQCIMEQ 137 QV Y+R Q+PLQC+ME Sbjct: 85 QVAQYARARQHPLQCVMEP 103 >gi|254450586|ref|ZP_05064023.1| ATP-dependent Clp protease adaptor protein ClpS [Octadecabacter antarcticus 238] gi|198264992|gb|EDY89262.1| ATP-dependent Clp protease adaptor protein ClpS [Octadecabacter antarcticus 238] Length = 107 Score = 148 bits (375), Expect = 2e-34, Method: Composition-based stats. Identities = 44/95 (46%), Positives = 69/95 (72%) Query: 44 LDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIG 103 + ++ +K + P LY+V+++ND+YTPMEFV+HVL+ FF H+ + IML VH +G+ Sbjct: 13 IGIKLETRTKTKRPPLYKVMILNDDYTPMEFVVHVLERFFSLTHDQSVEIMLAVHKKGLA 72 Query: 104 ECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 GV+++EIAE KV VM+ + +HQ+PLQC ME++ Sbjct: 73 VVGVFSHEIAETKVALVMDLAARHQHPLQCTMEKE 107 >gi|224369760|ref|YP_002603924.1| ClpS [Desulfobacterium autotrophicum HRM2] gi|259491245|sp|C0QI24|CLPS_DESAH RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|223692477|gb|ACN15760.1| ClpS [Desulfobacterium autotrophicum HRM2] Length = 104 Score = 148 bits (374), Expect = 2e-34, Method: Composition-based stats. Identities = 42/100 (42%), Positives = 58/100 (58%) Query: 39 EFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVH 98 E + + K P +YRV+L ND+YT MEFV+ +L F K E A IML +H Sbjct: 5 EPSIKQRTSSKVEKKEGYPPMYRVVLHNDDYTTMEFVVQILITVFGKSLEKASIIMLNIH 64 Query: 99 HQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 QG G CG Y E+AE KVN V + +R+ +PL+ ME++ Sbjct: 65 KQGKGICGSYTREVAETKVNTVHHLAREQGFPLKSTMEKE 104 >gi|283850415|ref|ZP_06367704.1| ATP-dependent Clp protease adaptor protein ClpS [Desulfovibrio sp. FW1012B] gi|283574441|gb|EFC22412.1| ATP-dependent Clp protease adaptor protein ClpS [Desulfovibrio sp. FW1012B] Length = 100 Score = 148 bits (374), Expect = 2e-34, Method: Composition-based stats. Identities = 42/90 (46%), Positives = 60/90 (66%) Query: 48 VRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGV 107 V VR P+ Y+VLL ND+YT MEFV+ VL F+K+ A IML VH+ G+G CG Sbjct: 10 VDVEEDVREPRRYKVLLHNDDYTTMEFVVQVLVGVFHKNENEATQIMLNVHNNGVGVCGE 69 Query: 108 YAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 + E+AE+KV+ V ++++ YPL+C ME+ Sbjct: 70 FTAEVAELKVSLVHRLAKENGYPLKCSMEE 99 >gi|120611897|ref|YP_971575.1| ATP-dependent Clp protease adaptor protein ClpS [Acidovorax citrulli AAC00-1] gi|158513033|sp|A1TS63|CLPS_ACIAC RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|120590361|gb|ABM33801.1| ATP-dependent Clp protease adaptor protein ClpS [Acidovorax citrulli AAC00-1] Length = 122 Score = 148 bits (374), Expect = 3e-34, Method: Composition-based stats. Identities = 45/97 (46%), Positives = 63/97 (64%) Query: 41 DNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQ 100 D R + + + P++Y+V+++ND+YTPMEFVI VLQ FF KD E A IMLK+H Sbjct: 24 DGGSVVLERRTQRTQPPQMYQVVMLNDDYTPMEFVIVVLQEFFGKDREAATQIMLKIHLD 83 Query: 101 GIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 G G CGVY+ ++A KV QV + + +PLQC+ E Sbjct: 84 GKGVCGVYSRDVAATKVEQVREAAHKAGHPLQCLSEP 120 >gi|89901532|ref|YP_524003.1| ATP-dependent Clp protease adaptor protein ClpS [Rhodoferax ferrireducens T118] gi|122478825|sp|Q21UT1|CLPS_RHOFD RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|89346269|gb|ABD70472.1| ATP-dependent Clp protease adaptor protein ClpS [Rhodoferax ferrireducens T118] Length = 120 Score = 148 bits (373), Expect = 3e-34, Method: Composition-based stats. Identities = 43/90 (47%), Positives = 64/90 (71%) Query: 48 VRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGV 107 R + K + P +Y+V+++ND+YTPMEFV+ V+Q FF KD E A IMLK+H G G CGV Sbjct: 28 ERRTQKTKPPHMYQVVMLNDDYTPMEFVVVVIQEFFGKDLEAATRIMLKIHLDGKGVCGV 87 Query: 108 YAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 Y+ ++A KV+QV++ + + +PL+CI E Sbjct: 88 YSKDVAATKVDQVLDAANKAGHPLKCISEP 117 >gi|312881479|ref|ZP_07741271.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio caribbenthicus ATCC BAA-2122] gi|309370845|gb|EFP98305.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio caribbenthicus ATCC BAA-2122] Length = 106 Score = 148 bits (373), Expect = 3e-34, Method: Composition-based stats. Identities = 42/88 (47%), Positives = 61/88 (69%) Query: 50 FSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYA 109 +KV P +Y V+L ND+YTPMEFVI +L+ FF D + A +MLKVH++G CG + Sbjct: 18 EKTKVTPPSMYNVILNNDDYTPMEFVIEILERFFSMDIDKATQVMLKVHYEGKAICGTFT 77 Query: 110 YEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 E+AE KV QV +S+++++PL C ME+ Sbjct: 78 AEVAETKVAQVTLHSKENEHPLLCTMER 105 >gi|242279301|ref|YP_002991430.1| ATP-dependent Clp protease adaptor protein ClpS [Desulfovibrio salexigens DSM 2638] gi|242122195|gb|ACS79891.1| ATP-dependent Clp protease adaptor protein ClpS [Desulfovibrio salexigens DSM 2638] Length = 102 Score = 148 bits (373), Expect = 3e-34, Method: Composition-based stats. Identities = 44/101 (43%), Positives = 66/101 (65%) Query: 37 IAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLK 96 +AE+ +S+V +++ P+ +RVLL ND+YT MEFV+ VL F K E + IML+ Sbjct: 1 MAEYKENFESDVLLEDELKEPRKFRVLLHNDDYTSMEFVVAVLMQVFRKTEEESTKIMLQ 60 Query: 97 VHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 VH+ G+G CGVY E+AE +V V ++Q YPL+C +E+ Sbjct: 61 VHNDGVGVCGVYTAEVAETRVEMVKQLAQQAGYPLKCTIEE 101 >gi|67460279|sp|Q6G5D4|CLPS_BARHE RecName: Full=ATP-dependent Clp protease adapter protein ClpS Length = 110 Score = 148 bits (373), Expect = 3e-34, Method: Composition-based stats. Identities = 55/107 (51%), Positives = 76/107 (71%) Query: 32 MNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAK 91 K E+ + + SK++ PKLYRVLL++D+YTPM+FVI VL++FF K+ E A Sbjct: 4 EKGKNGDEYRHDAFIMPKMRSKLQKPKLYRVLLLDDDYTPMDFVIFVLKSFFKKNFEEAM 63 Query: 92 CIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 IML VH G+GECG+Y YE+AEMK+ QV +RQ+++PLQC+ME K Sbjct: 64 HIMLSVHQNGVGECGIYNYEVAEMKIIQVRECARQNEHPLQCVMEWK 110 >gi|78357143|ref|YP_388592.1| ATP-dependent Clp protease adaptor protein ClpS [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|123552230|sp|Q30ZJ9|CLPS_DESDG RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|78219548|gb|ABB38897.1| ATP-dependent clp protease adaptor protein ClpS [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 104 Score = 148 bits (373), Expect = 4e-34, Method: Composition-based stats. Identities = 44/93 (47%), Positives = 61/93 (65%) Query: 45 DSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGE 104 D++V +++ P+ +RVLL ND+YT M+FV+ VL + F K E A IML VH +GIG Sbjct: 11 DADVLLEEELKEPRRFRVLLHNDDYTSMDFVVAVLIDIFRKSREQAMSIMLSVHEKGIGV 70 Query: 105 CGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 CGVY E+AE KV V +R +PL+C ME+ Sbjct: 71 CGVYTAEVAETKVAMVHARARAEGFPLRCSMEE 103 >gi|78485455|ref|YP_391380.1| ATP-dependent Clp protease adaptor protein ClpS [Thiomicrospira crunogena XCL-2] gi|123555526|sp|Q31GL7|CLPS_THICR RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|78363741|gb|ABB41706.1| ATP-dependent Clp protease adaptor protein ClpS [Thiomicrospira crunogena XCL-2] Length = 104 Score = 148 bits (373), Expect = 4e-34, Method: Composition-based stats. Identities = 50/96 (52%), Positives = 67/96 (69%), Gaps = 1/96 (1%) Query: 41 DNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQ 100 D+ + E KV+ PK Y+V+L+ND++TPM+FV+ VL FF D A +ML VH + Sbjct: 8 DDGVVLET-ARPKVKPPKRYQVVLLNDDFTPMDFVVDVLTRFFGMDEAKANAVMLAVHTK 66 Query: 101 GIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIME 136 G G CGVY+ E+AEMKV QV Y+R+HQ+PLQC ME Sbjct: 67 GKGTCGVYSREVAEMKVMQVNQYAREHQHPLQCEME 102 >gi|331004964|ref|ZP_08328374.1| ATP-dependent Clp protease adaptor protein ClpS [gamma proteobacterium IMCC1989] gi|330421206|gb|EGG95462.1| ATP-dependent Clp protease adaptor protein ClpS [gamma proteobacterium IMCC1989] Length = 126 Score = 147 bits (372), Expect = 4e-34, Method: Composition-based stats. Identities = 37/101 (36%), Positives = 60/101 (59%) Query: 35 KGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIM 94 K ++ + V+ P +Y+V+++ND+YTPMEFV++ L++FF E A +M Sbjct: 20 KEDDDYHHDHLLVEEAKPVVKKPPMYKVIMLNDDYTPMEFVVYALESFFGMGTEQATKVM 79 Query: 95 LKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIM 135 L+VH +G CGVY +IAE K QV + +++PL C + Sbjct: 80 LQVHTEGKAICGVYTKDIAETKAAQVNQCAADNEHPLLCEI 120 >gi|254438854|ref|ZP_05052348.1| ATP-dependent Clp protease adaptor protein ClpS [Octadecabacter antarcticus 307] gi|198254300|gb|EDY78614.1| ATP-dependent Clp protease adaptor protein ClpS [Octadecabacter antarcticus 307] Length = 113 Score = 147 bits (372), Expect = 4e-34, Method: Composition-based stats. Identities = 48/113 (42%), Positives = 76/113 (67%) Query: 26 FMADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYK 85 + D M + DN + ++ +K + P LY+V+++ND+YTPMEFV+HVL+ FF Sbjct: 1 MLQDVYMMADRDDDDDNDVGVKLETRTKTKRPPLYKVMILNDDYTPMEFVVHVLERFFSL 60 Query: 86 DHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 H+ + IM+ VH +G+ GV+++EIAE KV QVM+ + +HQ+PLQC ME++ Sbjct: 61 THDQSVDIMMAVHKKGLAVVGVFSHEIAETKVAQVMDLAARHQHPLQCTMEKE 113 >gi|198282816|ref|YP_002219137.1| ATP-dependent Clp protease adaptor protein ClpS [Acidithiobacillus ferrooxidans ATCC 53993] gi|198247337|gb|ACH82930.1| ATP-dependent Clp protease adaptor protein ClpS [Acidithiobacillus ferrooxidans ATCC 53993] Length = 102 Score = 147 bits (372), Expect = 4e-34, Method: Composition-based stats. Identities = 43/102 (42%), Positives = 72/102 (70%) Query: 37 IAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLK 96 + + + + + + P++YRVLLVND++TPM++V+H+L+ +F+K H+ A +M+ Sbjct: 1 MGRTQHRRSTILEREPQAQEPRMYRVLLVNDDFTPMDYVVHILEAYFHKPHDEAVAVMMA 60 Query: 97 VHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 VH QG G CG++ Y++AE KV V +RQHQ+PL+CIME++ Sbjct: 61 VHQQGRGLCGIFPYDLAETKVALVTADARQHQHPLRCIMEKE 102 >gi|301167864|emb|CBW27449.1| ATP-dependent Clp protease adaptor protein clpS [Bacteriovorax marinus SJ] Length = 123 Score = 147 bits (372), Expect = 4e-34, Method: Composition-based stats. Identities = 42/79 (53%), Positives = 61/79 (77%) Query: 60 YRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQ 119 Y+VL+ ND+YT MEFVI++LQ F K+ E A+ IMLKVH++GIG CGVY+YEIAE K + Sbjct: 44 YKVLIHNDDYTTMEFVIYILQKVFAKNLEEAQAIMLKVHNEGIGVCGVYSYEIAETKSEK 103 Query: 120 VMNYSRQHQYPLQCIMEQK 138 V ++++ +PL+C +E + Sbjct: 104 VNQEAKENGHPLKCTIEPE 122 >gi|237752679|ref|ZP_04583159.1| ATP-dependent Clp protease adapter protein clpS [Helicobacter winghamensis ATCC BAA-430] gi|229376168|gb|EEO26259.1| ATP-dependent Clp protease adapter protein clpS [Helicobacter winghamensis ATCC BAA-430] Length = 101 Score = 147 bits (372), Expect = 4e-34, Method: Composition-based stats. Identities = 46/97 (47%), Positives = 65/97 (67%) Query: 41 DNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQ 100 D D K++ P YRV+L+ND+YT EFVI VLQ F+KD E + +ML++HH Sbjct: 4 DAQFDQITETLEKIQEPIRYRVILLNDDYTTQEFVIEVLQAIFHKDFEESLNLMLQIHHN 63 Query: 101 GIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 G G CG+Y Y+IAE+KV QV +++ QYPL+ I+E+ Sbjct: 64 GKGVCGIYPYDIAEIKVAQVRKMAKEKQYPLRAILEK 100 >gi|218668114|ref|YP_002425013.1| ATP-dependent Clp protease adaptor protein ClpS [Acidithiobacillus ferrooxidans ATCC 23270] gi|218520327|gb|ACK80913.1| ATP-dependent Clp protease adaptor protein ClpS [Acidithiobacillus ferrooxidans ATCC 23270] Length = 114 Score = 147 bits (372), Expect = 5e-34, Method: Composition-based stats. Identities = 43/102 (42%), Positives = 72/102 (70%) Query: 37 IAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLK 96 + + + + + + P++YRVLLVND++TPM++V+H+L+ +F+K H+ A +M+ Sbjct: 13 MGRTQHRRSTILEREPQAQEPRMYRVLLVNDDFTPMDYVVHILEAYFHKPHDEAVAVMMA 72 Query: 97 VHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 VH QG G CG++ Y++AE KV V +RQHQ+PL+CIME++ Sbjct: 73 VHQQGRGLCGIFPYDLAETKVALVTADARQHQHPLRCIMEKE 114 >gi|24214803|ref|NP_712284.1| ATP-dependent Clp protease adaptor protein ClpS [Leptospira interrogans serovar Lai str. 56601] gi|45657680|ref|YP_001766.1| hypothetical protein LIC11815 [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|37077224|sp|Q8F4D8|CLPS_LEPIN RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|67460336|sp|Q72RD1|CLPS_LEPIC RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|24195812|gb|AAN49302.1| ATP-dependent Clp protease adaptor protein ClpS [Leptospira interrogans serovar Lai str. 56601] gi|45600920|gb|AAS70403.1| conserved hypothetical protein [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 111 Score = 147 bits (372), Expect = 5e-34, Method: Composition-based stats. Identities = 41/101 (40%), Positives = 61/101 (60%) Query: 35 KGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIM 94 I FD + + K++ P YRV+++ND++TPMEFV+ +LQ F++ ++ IM Sbjct: 2 SDIFRFDTEEQTLTKEKIKLKKPSKYRVIILNDDFTPMEFVVWILQMVFHRSRAESQQIM 61 Query: 95 LKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIM 135 LK H G CGVY++++A KV QV + QH YPL C M Sbjct: 62 LKAHITGKALCGVYSHDVARTKVAQVQQLAEQHGYPLHCTM 102 >gi|114707424|ref|ZP_01440320.1| ATP-dependent Clp protease adaptor protein ClpS [Fulvimarina pelagi HTCC2506] gi|114536983|gb|EAU40111.1| ATP-dependent Clp protease adaptor protein ClpS [Fulvimarina pelagi HTCC2506] Length = 101 Score = 147 bits (371), Expect = 5e-34, Method: Composition-based stats. Identities = 36/98 (36%), Positives = 57/98 (58%) Query: 41 DNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQ 100 D ++ + R KV PKLY+VLL+ND+YTP EFV+ VL+ F A+ +M+ H + Sbjct: 3 DTTVERKTRVKPKVERPKLYKVLLLNDDYTPREFVVMVLRAVFRLSDSQAETVMMTAHQK 62 Query: 101 GIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 G VY ++AE K ++ + +++H YPL E + Sbjct: 63 GSCVVSVYPRDVAETKASEATDLAKEHGYPLLFSTEPE 100 >gi|218779933|ref|YP_002431251.1| ATP-dependent Clp protease adaptor protein ClpS [Desulfatibacillum alkenivorans AK-01] gi|259491244|sp|B8FGA3|CLPS_DESAA RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|218761317|gb|ACL03783.1| ATP-dependent Clp protease adaptor protein ClpS [Desulfatibacillum alkenivorans AK-01] Length = 104 Score = 147 bits (371), Expect = 6e-34, Method: Composition-based stats. Identities = 40/99 (40%), Positives = 60/99 (60%) Query: 40 FDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHH 99 ++ D + K P++++VLL ND+YT MEFV+ VLQ F K A IML VH+ Sbjct: 6 HEDLGDVLTEPTQKTERPRMFKVLLHNDDYTTMEFVVGVLQRVFNKSVPEATRIMLNVHN 65 Query: 100 QGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 +G+G GVY E+AE K+ V + ++ +PL+C ME + Sbjct: 66 RGVGVAGVYTAEVAETKIETVHSMAQADGFPLKCSMEPE 104 >gi|152997267|ref|YP_001342102.1| ATP-dependent Clp protease adaptor protein ClpS [Marinomonas sp. MWYL1] gi|150838191|gb|ABR72167.1| ATP-dependent Clp protease adaptor protein ClpS [Marinomonas sp. MWYL1] Length = 116 Score = 147 bits (371), Expect = 6e-34, Method: Composition-based stats. Identities = 39/88 (44%), Positives = 62/88 (70%) Query: 50 FSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYA 109 ++++ P +Y+V+L ND+YTPM+FV+ VLQ FF D E A +ML+VH +G G CG+Y Sbjct: 27 EETELKPPSMYQVVLFNDDYTPMDFVVFVLQRFFSMDGEKANQVMLEVHQKGKGVCGIYP 86 Query: 110 YEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 ++IAE KV V + Q+++PL C +++ Sbjct: 87 FDIAETKVAMVQQFVEQNEHPLMCDLQK 114 >gi|320537709|ref|ZP_08037635.1| ATP-dependent Clp protease adaptor protein ClpS [Treponema phagedenis F0421] gi|320145446|gb|EFW37136.1| ATP-dependent Clp protease adaptor protein ClpS [Treponema phagedenis F0421] Length = 120 Score = 146 bits (370), Expect = 7e-34, Method: Composition-based stats. Identities = 40/120 (33%), Positives = 73/120 (60%) Query: 19 LALMSFIFMADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHV 78 ++ F+ ++ ++ + ++S V K++ P YRVLL+ND+ T M+FVI + Sbjct: 1 MSFFLFLLVSWQKLEYFSSMNDEIKIESTVLIKEKIKEPGFYRVLLLNDDITTMDFVISI 60 Query: 79 LQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 L F+K+++ A+ IML +H QG G G Y Y+IA + +V ++++ +PL+CIME++ Sbjct: 61 LIEVFHKNYKEAEIIMLTIHTQGSGLVGTYTYDIAATRCKKVEMLAQENGFPLKCIMEKE 120 >gi|87122218|ref|ZP_01078101.1| hypothetical protein MED121_05518 [Marinomonas sp. MED121] gi|86162538|gb|EAQ63820.1| hypothetical protein MED121_05518 [Marinomonas sp. MED121] Length = 114 Score = 146 bits (370), Expect = 7e-34, Method: Composition-based stats. Identities = 40/88 (45%), Positives = 66/88 (75%) Query: 50 FSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYA 109 ++++ P +Y+V+L+ND++TPM+FV+ VLQ FFY D E A+ +ML+VH++G G CGVY Sbjct: 25 EETELKPPSMYQVVLLNDDFTPMDFVVFVLQKFFYMDGEKAQKVMLEVHNKGKGVCGVYP 84 Query: 110 YEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 ++IAE KV V + Q+++PL C +++ Sbjct: 85 FDIAETKVAMVQQFVEQNEHPLMCDLQK 112 >gi|317153522|ref|YP_004121570.1| ATP-dependent Clp protease adaptor protein ClpS [Desulfovibrio aespoeensis Aspo-2] gi|316943773|gb|ADU62824.1| ATP-dependent Clp protease adaptor protein ClpS [Desulfovibrio aespoeensis Aspo-2] Length = 104 Score = 146 bits (370), Expect = 8e-34, Method: Composition-based stats. Identities = 43/99 (43%), Positives = 58/99 (58%) Query: 40 FDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHH 99 + E+ +VR P+ Y+VLL ND+YT M+FVI VL F K A IML VH+ Sbjct: 6 TGDRTSPELFDEREVREPRKYKVLLHNDDYTTMDFVIEVLVRVFRKSEAQAMAIMLAVHN 65 Query: 100 QGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 +G G CG Y E+AE KV+ V +R +PL+C ME + Sbjct: 66 EGYGVCGTYTAEVAETKVDMVHRLARSAGFPLKCSMEGE 104 >gi|238020305|ref|ZP_04600731.1| hypothetical protein GCWU000324_00183 [Kingella oralis ATCC 51147] gi|237867285|gb|EEP68291.1| hypothetical protein GCWU000324_00183 [Kingella oralis ATCC 51147] Length = 101 Score = 146 bits (369), Expect = 9e-34, Method: Composition-based stats. Identities = 41/92 (44%), Positives = 57/92 (61%) Query: 46 SEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGEC 105 + +++ PK Y V L+ND+YTPM+FV+ VLQ+ F A IML+VHH G G C Sbjct: 7 TRQSQKTQLAPPKKYGVFLLNDHYTPMDFVVDVLQDVFRLPESKAVSIMLEVHHHGKGLC 66 Query: 106 GVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 GVY +IAE K QVM + + +PL C +E+ Sbjct: 67 GVYTRDIAETKQQQVMQLADEAGHPLMCTIEE 98 >gi|12230837|sp|Q9RWS9|CLPS_DEIRA RecName: Full=ATP-dependent Clp protease adapter protein ClpS Length = 113 Score = 146 bits (369), Expect = 9e-34, Method: Composition-based stats. Identities = 39/93 (41%), Positives = 65/93 (69%) Query: 46 SEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGEC 105 ++ ++ + P+L+RVLL+ND+YTPM++V+ VL+ FF K + A+ IML VHH+G G Sbjct: 17 TQTLERTETKKPRLWRVLLLNDDYTPMDYVVQVLEQFFRKTEQEAELIMLAVHHKGQGVA 76 Query: 106 GVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 GVY ++AE KV QV ++++ +PL+ + E + Sbjct: 77 GVYTRDVAETKVAQVTAHAQREGHPLRVVAEPE 109 >gi|149198609|ref|ZP_01875653.1| ATP-dependent Clp protease adaptor protein ClpS [Lentisphaera araneosa HTCC2155] gi|149138324|gb|EDM26733.1| ATP-dependent Clp protease adaptor protein ClpS [Lentisphaera araneosa HTCC2155] Length = 103 Score = 146 bits (369), Expect = 1e-33, Method: Composition-based stats. Identities = 37/94 (39%), Positives = 64/94 (68%) Query: 45 DSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGE 104 D+ + KV+ P ++V+L ND+YTPM+FV++++ + F+K + A +ML VH +G Sbjct: 10 DAALLEKRKVKRPSRFKVILHNDDYTPMDFVVYLIMSVFHKTEDEAAQLMLTVHVKGKAI 69 Query: 105 CGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 CG+Y EIAE KV++ M+ ++Q +PL C M+++ Sbjct: 70 CGIYPKEIAENKVDKAMSMAKQEGHPLLCTMQKE 103 >gi|116747493|ref|YP_844180.1| ATP-dependent Clp protease adaptor protein ClpS [Syntrophobacter fumaroxidans MPOB] gi|116696557|gb|ABK15745.1| ATP-dependent Clp protease adaptor protein ClpS [Syntrophobacter fumaroxidans MPOB] Length = 80 Score = 146 bits (368), Expect = 1e-33, Method: Composition-based stats. Identities = 41/79 (51%), Positives = 55/79 (69%) Query: 59 LYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVN 118 +YRVLL ND+YT MEFV+ +LQ+ F+K A IML VH G G CGV+ E+AE KV Sbjct: 1 MYRVLLHNDDYTTMEFVVEILQSVFHKSPSEATRIMLLVHKSGTGVCGVFTAEVAETKVE 60 Query: 119 QVMNYSRQHQYPLQCIMEQ 137 V + +R++ +PLQC ME+ Sbjct: 61 LVHHLARKNGFPLQCSMEE 79 >gi|209550349|ref|YP_002282266.1| ATP-dependent Clp protease adaptor [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209536105|gb|ACI56040.1| ATP-dependent Clp protease adaptor protein ClpS [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 103 Score = 146 bits (368), Expect = 1e-33, Method: Composition-based stats. Identities = 35/102 (34%), Positives = 57/102 (55%) Query: 37 IAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLK 96 +++ D L + + K+ PKLY+V+LVND+YTP EFVI +L+ F ET +M+ Sbjct: 1 MSDNDVALKPKTKVKPKLDKPKLYKVILVNDDYTPREFVIVILKAVFRMSEETGYRVMMT 60 Query: 97 VHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 H G V A +IAE K + ++ +++ +PL E + Sbjct: 61 AHKLGSCVVVVCARDIAETKAKEGIDLAKEMGFPLMFTTEPE 102 >gi|316984242|gb|EFV63218.1| ATP-dependent Clp protease adaptor ClpS family protein [Neisseria meningitidis H44/76] Length = 183 Score = 145 bits (367), Expect = 2e-33, Method: Composition-based stats. Identities = 42/111 (37%), Positives = 57/111 (51%) Query: 27 MADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKD 86 M R + G + PK Y V L+ND+YT MEFV+ +L F Sbjct: 72 MPSERGFQMGHTMTAQHQSDTLLHRLNTLPPKRYGVFLLNDDYTTMEFVVEILTEIFMLG 131 Query: 87 HETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 E A +ML VHH+G G CG Y +IA+ K QVM ++ +PLQCI+E+ Sbjct: 132 QEQAVAVMLLVHHEGKGLCGTYTRDIAQTKQQQVMQRAKAEGHPLQCIVEE 182 >gi|253828028|ref|ZP_04870913.1| ATP-dependent Clp protease adaptor protein ClpS [Helicobacter canadensis MIT 98-5491] gi|253511434|gb|EES90093.1| ATP-dependent Clp protease adaptor protein ClpS [Helicobacter canadensis MIT 98-5491] Length = 101 Score = 145 bits (367), Expect = 2e-33, Method: Composition-based stats. Identities = 39/97 (40%), Positives = 64/97 (65%) Query: 41 DNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQ 100 N +++ K++ P Y+V+L+ND+YT +FVI +LQ F+K E + +ML++HH Sbjct: 4 QNQIENATETLEKLQEPIRYKVILLNDDYTTQDFVIEILQKVFHKGFEESLNLMLQIHHN 63 Query: 101 GIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 G G CG+Y Y+IAE K QV +++ Q+PL+ I+E+ Sbjct: 64 GRGMCGIYPYDIAETKAMQVRKMAKEKQFPLRAILEK 100 >gi|268680246|ref|YP_003304677.1| ATP-dependent Clp protease adaptor protein ClpS [Sulfurospirillum deleyianum DSM 6946] gi|268618277|gb|ACZ12642.1| ATP-dependent Clp protease adaptor protein ClpS [Sulfurospirillum deleyianum DSM 6946] Length = 102 Score = 145 bits (367), Expect = 2e-33, Method: Composition-based stats. Identities = 46/102 (45%), Positives = 69/102 (67%) Query: 37 IAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLK 96 + + + ++E +++ P+LY+VLL+ND+Y+ MEFVI VL F+ E A IML Sbjct: 1 MHQSNPAFENETVELIEIKEPRLYKVLLLNDDYSSMEFVIKVLMQIFHHSFEKATEIMLS 60 Query: 97 VHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 VH +G G CGVYAYEIAE KV+QV +++ ++PL+ IME + Sbjct: 61 VHEKGKGLCGVYAYEIAETKVSQVRKMAKEEKFPLRAIMEAE 102 >gi|157738129|ref|YP_001490813.1| ATP-dependent Clp protease adaptor protein ClpS [Arcobacter butzleri RM4018] gi|315636272|ref|ZP_07891522.1| ATP-dependent Clp protease adaptor protein ClpS [Arcobacter butzleri JV22] gi|157699983|gb|ABV68143.1| ATP-dependent Clp protease adaptor protein ClpS [Arcobacter butzleri RM4018] gi|315479361|gb|EFU70044.1| ATP-dependent Clp protease adaptor protein ClpS [Arcobacter butzleri JV22] Length = 99 Score = 145 bits (367), Expect = 2e-33, Method: Composition-based stats. Identities = 40/97 (41%), Positives = 61/97 (62%) Query: 42 NCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQG 101 N ++ E+ ++ PK Y V L+ND+Y+ M+FVI VL F K + A IML +H+ G Sbjct: 3 NEIEVELNDELDLQEPKKYNVFLLNDDYSTMDFVIDVLVKIFRKSTQDATEIMLNIHNNG 62 Query: 102 IGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 G CG+Y +EIA KV QV +R+ +PL+ +ME++ Sbjct: 63 KGLCGIYTHEIALTKVMQVKTMAREKGFPLKAVMEEE 99 >gi|152993643|ref|YP_001359364.1| ATP-dependent Clp protease, adaptor protein ClpS [Sulfurovum sp. NBC37-1] gi|151425504|dbj|BAF73007.1| ATP-dependent Clp protease, adaptor protein ClpS [Sulfurovum sp. NBC37-1] Length = 99 Score = 145 bits (366), Expect = 2e-33, Method: Composition-based stats. Identities = 37/94 (39%), Positives = 62/94 (65%) Query: 44 LDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIG 103 + E ++ P++Y+VLL ND+YT M+FV+ VL + F+K E A IML++H +G Sbjct: 4 FEVESDVELELWEPQMYKVLLHNDDYTSMDFVVEVLTSIFHKTQEQAVQIMLQIHEKGKA 63 Query: 104 ECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 CGVY++EIA+ K QV ++++++PL +E+ Sbjct: 64 ICGVYSFEIAQTKAEQVKQLAKKNEFPLLATIEE 97 >gi|307721665|ref|YP_003892805.1| ATP-dependent Clp protease adaptor protein ClpS [Sulfurimonas autotrophica DSM 16294] gi|306979758|gb|ADN09793.1| ATP-dependent Clp protease adaptor protein ClpS [Sulfurimonas autotrophica DSM 16294] Length = 99 Score = 145 bits (366), Expect = 2e-33, Method: Composition-based stats. Identities = 40/97 (41%), Positives = 62/97 (63%) Query: 42 NCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQG 101 E+ + ++ PK Y+V L+ND+YT M+FV+ +L + F+K +E A+ IML+VH Sbjct: 3 TNTHLEIDEDTALKYPKKYKVFLLNDDYTSMDFVVDILMSIFHKSYEQAQDIMLEVHKND 62 Query: 102 IGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 G CGVY YEIAE K+ QV ++ +PL+ ME++ Sbjct: 63 RGLCGVYTYEIAETKIMQVRRKAKDSGFPLKATMEEE 99 >gi|291334349|gb|ADD94008.1| hypothetical protein ED21_23138 [uncultured marine bacterium MedDCM-OCT-S11-C310] Length = 112 Score = 145 bits (366), Expect = 2e-33, Method: Composition-based stats. Identities = 47/111 (42%), Positives = 67/111 (60%), Gaps = 1/111 (0%) Query: 27 MADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKD 86 M+D N + ++ KV+ PK Y+VLL NDNYT MEFV+ VL+ F+ + Sbjct: 1 MSDGNDNWEDEP-YEGEGQVATETEIKVKRPKRYKVLLHNDNYTTMEFVVLVLKTVFHLE 59 Query: 87 HETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +A +ML VH +G G GV++YE+AE KV++V +R H YPL+C ME Sbjct: 60 EPSAVQVMLHVHRKGAGVAGVFSYEVAETKVHKVTELARAHDYPLRCSMEP 110 >gi|218681500|ref|ZP_03529387.1| ATP-dependent Clp protease adaptor [Rhizobium etli CIAT 894] Length = 112 Score = 145 bits (366), Expect = 2e-33, Method: Composition-based stats. Identities = 35/101 (34%), Positives = 58/101 (57%) Query: 37 IAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLK 96 +++ D L +++ K+ PKLY+V+LVND+YTP EFVI +L++ F ET +M+ Sbjct: 1 MSDNDVALKPKIKVKPKLDKPKLYKVILVNDDYTPREFVIVILKSVFRMSEETGYKVMMT 60 Query: 97 VHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 H G V A +IAE K + ++ +++ +PL E Sbjct: 61 AHKLGSCVVVVCARDIAETKAKEGIDLAKEMGFPLMFTTEP 101 >gi|303327023|ref|ZP_07357465.1| ATP-dependent Clp protease adaptor protein ClpS [Desulfovibrio sp. 3_1_syn3] gi|302863011|gb|EFL85943.1| ATP-dependent Clp protease adaptor protein ClpS [Desulfovibrio sp. 3_1_syn3] Length = 106 Score = 144 bits (365), Expect = 2e-33, Method: Composition-based stats. Identities = 43/99 (43%), Positives = 63/99 (63%) Query: 39 EFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVH 98 + + +S K++ P YRVLL ND+YT M+FVI++L F+K E A IML VH Sbjct: 6 QGEADGESRTIVVKKLKEPDRYRVLLHNDDYTSMDFVINILCGVFHKPLEEATAIMLAVH 65 Query: 99 HQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 QG+G+CG+Y E+AE KV++V + +PL+C ME+ Sbjct: 66 QQGVGQCGIYTREVAEAKVSRVHREAHGAGFPLRCTMEK 104 >gi|224436508|ref|ZP_03657522.1| hypothetical protein HcinC1_01115 [Helicobacter cinaedi CCUG 18818] Length = 105 Score = 144 bits (365), Expect = 2e-33, Method: Composition-based stats. Identities = 43/102 (42%), Positives = 63/102 (61%) Query: 36 GIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIML 95 + FD +S + + PKLYRVLL+ND++T M FV H+L F K + A+ I L Sbjct: 2 AFSSFDTSFESWTHTGTMLEEPKLYRVLLLNDDWTAMNFVTHILMEVFDKTSQEARAITL 61 Query: 96 KVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 KVH++G G CG+Y Y+IAE+K V +++ YPL+ I E+ Sbjct: 62 KVHNEGKGVCGIYPYDIAELKTQLVSQKAKEQGYPLRVITEE 103 >gi|258546117|ref|ZP_05706351.1| ATP-dependent Clp protease adaptor protein ClpS [Cardiobacterium hominis ATCC 15826] gi|258518542|gb|EEV87401.1| ATP-dependent Clp protease adaptor protein ClpS [Cardiobacterium hominis ATCC 15826] Length = 104 Score = 144 bits (365), Expect = 3e-33, Method: Composition-based stats. Identities = 42/101 (41%), Positives = 65/101 (64%), Gaps = 1/101 (0%) Query: 38 AEFDNCLDSEVRF-SSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLK 96 + D D+E ++ P+ Y V+L+ND+YT M+FV+ VL +F K+ A+ IM + Sbjct: 3 PQHDFDPDTETLTADPELGEPRQYEVVLLNDDYTTMDFVVDVLMRYFNKNFAEAEDIMYQ 62 Query: 97 VHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 VH QG G CG+Y ++IAE KVNQV+ ++R + YPL C++ Sbjct: 63 VHEQGSGVCGIYPFDIAESKVNQVIEHARANNYPLLCVLRP 103 >gi|34556771|ref|NP_906586.1| hypothetical protein WS0336 [Wolinella succinogenes DSM 1740] gi|39930938|sp|Q7MSL3|CLPS_WOLSU RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|34482485|emb|CAE09486.1| conserved hypothetical protein [Wolinella succinogenes] Length = 102 Score = 144 bits (365), Expect = 3e-33, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 66/97 (68%) Query: 41 DNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQ 100 + ++E++ V P+ ++V+L+ND+Y+ M+FV+ VL F K+ + A +MLKVH++ Sbjct: 5 GSDFETEIKEEIIVAEPRRFKVILLNDDYSTMDFVVEVLMVIFNKNFDEALGVMLKVHNE 64 Query: 101 GIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 G G CG+Y Y++AE KV+QV + + +PL+ I+E+ Sbjct: 65 GRGVCGIYPYDVAETKVSQVKKKAEESGFPLRAILEE 101 >gi|254468722|ref|ZP_05082128.1| ATP-dependent Clp protease adaptor protein ClpS [beta proteobacterium KB13] gi|207087532|gb|EDZ64815.1| ATP-dependent Clp protease adaptor protein ClpS [beta proteobacterium KB13] Length = 102 Score = 144 bits (364), Expect = 3e-33, Method: Composition-based stats. Identities = 44/101 (43%), Positives = 72/101 (71%) Query: 37 IAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLK 96 +A+ D+ + E + K +PK+++VL++ND++TPMEFV+ V+ F K + A IMLK Sbjct: 1 MAQEDHKIIVEPKKKVKPNLPKMFKVLVLNDDFTPMEFVVDVIMKVFTKTEDEATRIMLK 60 Query: 97 VHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +H +G+ CG+Y YEIAE K+NQV+ +++ Q+PLQ I+E+ Sbjct: 61 IHTEGMAICGIYPYEIAETKMNQVLKLAKEAQHPLQSIIEK 101 >gi|190892773|ref|YP_001979315.1| putative ATP-dependent Clp protease adaptor protein [Rhizobium etli CIAT 652] gi|190698052|gb|ACE92137.1| putative ATP-dependent Clp protease adaptor protein [Rhizobium etli CIAT 652] Length = 103 Score = 144 bits (364), Expect = 3e-33, Method: Composition-based stats. Identities = 35/102 (34%), Positives = 57/102 (55%) Query: 37 IAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLK 96 +++ D L + + K+ PKLY+V+LVND+YTP EFVI +L+ F ET +M+ Sbjct: 1 MSDNDVALKPKTKVEPKLDKPKLYKVILVNDDYTPREFVIAILKIVFRMSEETGYRVMMT 60 Query: 97 VHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 H G V A +IAE K + ++ +++ +PL E + Sbjct: 61 AHKLGSCVVVVCAKDIAETKAKEGIDLAKEMGFPLMFTTEPE 102 >gi|160898941|ref|YP_001564523.1| ATP-dependent Clp protease adaptor protein ClpS [Delftia acidovorans SPH-1] gi|160364525|gb|ABX36138.1| ATP-dependent Clp protease adaptor protein ClpS [Delftia acidovorans SPH-1] Length = 125 Score = 144 bits (364), Expect = 4e-33, Method: Composition-based stats. Identities = 44/97 (45%), Positives = 65/97 (67%) Query: 41 DNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQ 100 D+ R +V+ P++Y+V+++ND++TPMEFVI VLQ F KD ETA IMLK+H Sbjct: 27 DDGAVVLERRRQRVQPPQMYQVVMLNDDFTPMEFVIIVLQELFGKDRETATQIMLKIHLD 86 Query: 101 GIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 G G CGVY+ ++A KV QV+ +++ +PLQ + E Sbjct: 87 GRGVCGVYSRDVAATKVEQVLQAAQKAGHPLQAMFEP 123 >gi|218674100|ref|ZP_03523769.1| ATP-dependent Clp protease adaptor [Rhizobium etli GR56] gi|327188355|gb|EGE55572.1| ATP-dependent Clp protease adaptor [Rhizobium etli CNPAF512] Length = 103 Score = 144 bits (364), Expect = 4e-33, Method: Composition-based stats. Identities = 35/102 (34%), Positives = 57/102 (55%) Query: 37 IAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLK 96 +++ D L + + K+ PKLY+V+LVND+YTP EFVI +L+ F ET +M+ Sbjct: 1 MSDNDVALKPKTKVKPKLDKPKLYKVILVNDDYTPREFVIVILKVVFRMSEETGYRVMMT 60 Query: 97 VHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 H G V A +IAE K + ++ +++ +PL E + Sbjct: 61 AHKLGSCVVVVCAKDIAETKAKEGIDLAKEMGFPLMFTTEPE 102 >gi|261364236|ref|ZP_05977119.1| ATP-dependent Clp protease adaptor protein ClpS [Neisseria mucosa ATCC 25996] gi|288567473|gb|EFC89033.1| ATP-dependent Clp protease adaptor protein ClpS [Neisseria mucosa ATCC 25996] Length = 103 Score = 144 bits (363), Expect = 4e-33, Method: Composition-based stats. Identities = 44/105 (41%), Positives = 57/105 (54%), Gaps = 5/105 (4%) Query: 33 NKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKC 92 N E D L K PK Y V L+ND+YT MEFV+ +L F E A Sbjct: 3 NPNTHHESDTLL-----SDQKTAPPKRYGVFLLNDDYTTMEFVVEILTEIFMLGEEQAVA 57 Query: 93 IMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +ML VHH+G G CG Y +IA+ K QVM ++ +PLQCI+E+ Sbjct: 58 VMLLVHHEGKGLCGTYTRDIAQTKQQQVMQRAKAEGHPLQCIVEE 102 >gi|86358632|ref|YP_470524.1| ATP-dependent Clp protease adaptor [Rhizobium etli CFN 42] gi|86282734|gb|ABC91797.1| hypothetical conserved protein [Rhizobium etli CFN 42] Length = 103 Score = 144 bits (363), Expect = 4e-33, Method: Composition-based stats. Identities = 35/102 (34%), Positives = 57/102 (55%) Query: 37 IAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLK 96 +++ D L + + K+ PKLY+V+LVND+YTP EFVI +L+ F ET +M+ Sbjct: 1 MSDNDVALKPKTKVRPKLDKPKLYKVILVNDDYTPREFVIVILKVVFRMSEETGYRVMMT 60 Query: 97 VHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 H G V A +IAE K + ++ +++ +PL E + Sbjct: 61 AHKLGSCVVVVCAKDIAETKAKEGIDLAKEMGFPLMFTTEPE 102 >gi|313201916|ref|YP_004040574.1| ATP-dependent clp protease adaptor protein clps [Methylovorus sp. MP688] gi|312441232|gb|ADQ85338.1| ATP-dependent Clp protease adaptor protein ClpS [Methylovorus sp. MP688] Length = 77 Score = 144 bits (363), Expect = 4e-33, Method: Composition-based stats. Identities = 46/76 (60%), Positives = 61/76 (80%) Query: 62 VLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVM 121 ++L+ND+YTPMEFV+ V+Q FF K E A IMLKVH +G G CGVY ++IAE KVNQV+ Sbjct: 1 MILLNDDYTPMEFVVEVIQRFFNKSREQATQIMLKVHTEGAGICGVYPHDIAETKVNQVL 60 Query: 122 NYSRQHQYPLQCIMEQ 137 Y+R++Q+PLQC ME+ Sbjct: 61 GYAREYQHPLQCAMEE 76 >gi|313498102|gb|ADR59468.1| ClpS [Pseudomonas putida BIRD-1] Length = 81 Score = 144 bits (363), Expect = 5e-33, Method: Composition-based stats. Identities = 38/79 (48%), Positives = 55/79 (69%) Query: 59 LYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVN 118 +Y+V+L ND+YTPM+FV+ VL+ FF + E A IML VH +G CG++ +IAE K Sbjct: 1 MYKVVLFNDDYTPMDFVVEVLETFFSLNRELATKIMLTVHTEGRAVCGLFTRDIAETKAM 60 Query: 119 QVMNYSRQHQYPLQCIMEQ 137 QV Y+R+ Q+PL C +E+ Sbjct: 61 QVNQYARESQHPLLCEIEK 79 >gi|307718944|ref|YP_003874476.1| ATP-dependent Clp protease adaptor protein clpS [Spirochaeta thermophila DSM 6192] gi|306532669|gb|ADN02203.1| ATP-dependent Clp protease adaptor protein clpS [Spirochaeta thermophila DSM 6192] Length = 134 Score = 144 bits (363), Expect = 5e-33, Method: Composition-based stats. Identities = 36/79 (45%), Positives = 53/79 (67%) Query: 59 LYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVN 118 +Y V+L+ND++TPMEFV+ +L + F+KD A IML VH G G+ Y Y+IA KV Sbjct: 55 MYWVVLLNDDFTPMEFVVDILVDIFHKDRVEATKIMLTVHRTGKGKVATYPYDIAVTKVA 114 Query: 119 QVMNYSRQHQYPLQCIMEQ 137 QV +R+ +PL+C +E+ Sbjct: 115 QVHRRAREAGHPLRCTVEK 133 >gi|255065179|ref|ZP_05317034.1| ATP-dependent Clp protease adaptor protein ClpS [Neisseria sicca ATCC 29256] gi|255050600|gb|EET46064.1| ATP-dependent Clp protease adaptor protein ClpS [Neisseria sicca ATCC 29256] Length = 103 Score = 144 bits (363), Expect = 5e-33, Method: Composition-based stats. Identities = 44/105 (41%), Positives = 57/105 (54%), Gaps = 5/105 (4%) Query: 33 NKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKC 92 N E D L K PK Y V L+ND+YT MEFV+ +L F E A Sbjct: 3 NPNTHHESDTLL-----SDQKTAPPKRYGVFLLNDDYTTMEFVVEILTEIFMLGQEQAVA 57 Query: 93 IMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +ML VHH+G G CG Y +IA+ K QVM ++ +PLQCI+E+ Sbjct: 58 VMLLVHHEGKGLCGTYTRDIAQTKQQQVMQRAKAEGHPLQCIVEE 102 >gi|218460642|ref|ZP_03500733.1| ATP-dependent Clp protease adaptor [Rhizobium etli Kim 5] gi|218506911|ref|ZP_03504789.1| ATP-dependent Clp protease adaptor [Rhizobium etli Brasil 5] Length = 107 Score = 143 bits (362), Expect = 6e-33, Method: Composition-based stats. Identities = 35/102 (34%), Positives = 57/102 (55%) Query: 37 IAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLK 96 +++ D L + + K+ PKLY+V+LVND+YTP EFVI +L+ F ET +M+ Sbjct: 5 MSDNDVALKPKTKVKPKLDKPKLYKVILVNDDYTPREFVIVILKVVFRMSEETGYRVMMT 64 Query: 97 VHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 H G V A +IAE K + ++ +++ +PL E + Sbjct: 65 AHKLGSCVVVVCAKDIAETKAKEGIDLAKEMGFPLMFTTEPE 106 >gi|218661878|ref|ZP_03517808.1| ATP-dependent Clp protease adaptor [Rhizobium etli IE4771] Length = 107 Score = 143 bits (362), Expect = 7e-33, Method: Composition-based stats. Identities = 34/102 (33%), Positives = 57/102 (55%) Query: 37 IAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLK 96 +++ D L + + K+ PKLY+V+LVND+YTP +FVI +L+ F ET +M+ Sbjct: 5 MSDNDVALKPKTKVKPKLDKPKLYKVILVNDDYTPRDFVIVILKVVFRMSEETGYRVMMT 64 Query: 97 VHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 H G V A +IAE K + ++ +++ +PL E + Sbjct: 65 AHKLGSCVVVVCAKDIAETKAKEGIDLAKEMGFPLMFTTEPE 106 >gi|161869772|ref|YP_001598940.1| ATP-dependent Clp protease adaptor protein ClpS [Neisseria meningitidis 053442] gi|161595325|gb|ABX72985.1| conserved hypothetical protein [Neisseria meningitidis 053442] Length = 153 Score = 143 bits (361), Expect = 7e-33, Method: Composition-based stats. Identities = 42/111 (37%), Positives = 57/111 (51%) Query: 27 MADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKD 86 M R + G + PK Y V L+ND+YT MEFV+ +L F Sbjct: 42 MPSERGFQMGHTMTAQHQSDTLLHRLNTLPPKRYGVFLLNDDYTTMEFVVEILTEIFMLG 101 Query: 87 HETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 E A +ML VHH+G G CG Y +IA+ K QVM ++ +PLQCI+E+ Sbjct: 102 QEQAVAVMLLVHHEGKGLCGTYTRDIAQTKQQQVMQRAKAEGHPLQCIVEE 152 >gi|257453454|ref|ZP_05618749.1| ATP-dependent Clp protease adaptor protein ClpS [Enhydrobacter aerosaccus SK60] gi|257449206|gb|EEV24154.1| ATP-dependent Clp protease adaptor protein ClpS [Enhydrobacter aerosaccus SK60] Length = 161 Score = 143 bits (361), Expect = 7e-33, Method: Composition-based stats. Identities = 43/120 (35%), Positives = 64/120 (53%), Gaps = 1/120 (0%) Query: 19 LALMSFIFMADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHV 78 L S + + +G D D + +++ P++Y V++ ND+YTPMEFV+ V Sbjct: 42 LPSQSPNSLPARLTDIEGEPNTDPVEDV-LLADPELKKPQMYAVVMYNDDYTPMEFVVDV 100 Query: 79 LQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 LQN F ++A IML +H QG G G+Y +IAE K V +RQ YPL +E + Sbjct: 101 LQNHFKHTLDSAISIMLAIHQQGKGIAGIYPKDIAETKAQAVNREARQAGYPLLSQIEPQ 160 >gi|254458761|ref|ZP_05072185.1| ATP-dependent Clp protease adaptor protein ClpS [Campylobacterales bacterium GD 1] gi|207084527|gb|EDZ61815.1| ATP-dependent Clp protease adaptor protein ClpS [Campylobacterales bacterium GD 1] Length = 99 Score = 143 bits (361), Expect = 8e-33, Method: Composition-based stats. Identities = 41/96 (42%), Positives = 63/96 (65%) Query: 43 CLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGI 102 D E+ K++ PK Y+V L+ND+YT M+FVI +L F+K + A+ IML +H + Sbjct: 4 NTDLELYNEVKLKHPKKYKVFLLNDDYTSMDFVIDILITIFHKSYSQAESIMLDIHKKER 63 Query: 103 GECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 G CGVY +EIAE KV QV ++ + +PL+ +ME++ Sbjct: 64 GLCGVYTHEIAETKVMQVRRKAKDNGFPLKAMMEEE 99 >gi|108758335|ref|YP_634160.1| ATP-dependent Clp protease adaptor protein ClpS [Myxococcus xanthus DK 1622] gi|122387659|sp|Q1CZL3|CLPS_MYXXD RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|108462215|gb|ABF87400.1| ATP-dependent Clp protease adaptor protein ClpS [Myxococcus xanthus DK 1622] Length = 107 Score = 143 bits (361), Expect = 8e-33, Method: Composition-based stats. Identities = 42/101 (41%), Positives = 61/101 (60%) Query: 38 AEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKV 97 E D + +E K++ P LY+VLL NDNYT EFV+ VL+ F+K A IML V Sbjct: 5 HEHDTSVITESAPKQKLKKPPLYKVLLHNDNYTTREFVVAVLKEVFHKSETDAVQIMLHV 64 Query: 98 HHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 H+ G+G GVY Y++AE K+ V ++++ PL+ ME + Sbjct: 65 HYNGVGVAGVYTYDVAETKIQTVEAAAQENDMPLRLSMEPE 105 >gi|262198176|ref|YP_003269385.1| ATP-dependent Clp protease adaptor protein ClpS [Haliangium ochraceum DSM 14365] gi|262081523|gb|ACY17492.1| ATP-dependent Clp protease adaptor protein ClpS [Haliangium ochraceum DSM 14365] Length = 116 Score = 143 bits (361), Expect = 8e-33, Method: Composition-based stats. Identities = 43/109 (39%), Positives = 64/109 (58%), Gaps = 3/109 (2%) Query: 29 DSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHE 88 DS + G E ++ ++ + P LY+VLL ND+YT EFV+ VLQ+ F + Sbjct: 9 DSGKKRPGTKE---ERGVAIKERTRTKKPPLYKVLLHNDDYTTKEFVVWVLQSIFQRSES 65 Query: 89 TAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 A IM+ VH+ G+G G+Y E+AE K+ + N ++ H+YPLQC ME Sbjct: 66 EAVRIMMHVHNTGVGIAGIYTLEVAETKMTKTTNLAQAHEYPLQCSMEP 114 >gi|269468372|gb|EEZ80037.1| hypothetical protein Sup05_1280 [uncultured SUP05 cluster bacterium] Length = 99 Score = 143 bits (360), Expect = 9e-33, Method: Composition-based stats. Identities = 42/88 (47%), Positives = 64/88 (72%) Query: 50 FSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYA 109 KV+ P ++VLL+ND+YT M+FV+ VL FF K E A+ IMLK+H +G G CGVY Sbjct: 9 TKPKVKKPNRFQVLLLNDDYTTMDFVVEVLTKFFSKSEEAAQAIMLKIHLEGEGICGVYP 68 Query: 110 YEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 ++IA+ KV+QV+++SR+ + PL C++ + Sbjct: 69 HDIAQTKVSQVIDFSRKKEQPLMCVIRE 96 >gi|161610776|ref|NP_946554.2| ATP-dependent Clp protease adaptor [Rhodopseudomonas palustris CGA009] gi|192289806|ref|YP_001990411.1| ATP-dependent Clp protease adaptor [Rhodopseudomonas palustris TIE-1] gi|67460483|sp|Q6NAI2|CLPS1_RHOPA RecName: Full=ATP-dependent Clp protease adapter protein ClpS 1 gi|192283555|gb|ACE99935.1| ATP-dependent Clp protease adaptor protein ClpS [Rhodopseudomonas palustris TIE-1] Length = 103 Score = 143 bits (360), Expect = 1e-32, Method: Composition-based stats. Identities = 35/102 (34%), Positives = 56/102 (54%) Query: 37 IAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLK 96 ++ D ++ + KV PKL++V+LVND+YTP EFV+ VL+ F + A +ML Sbjct: 1 MSNIDLKPKTKAKAKIKVERPKLHKVILVNDDYTPREFVVSVLKGEFRMTEDQATKVMLT 60 Query: 97 VHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 H +G+ GV+ ++AE K + + R YPL E + Sbjct: 61 AHQRGVCVVGVFTKDVAETKATRATDAGRAKGYPLLFTTEPE 102 >gi|194098152|ref|YP_002001200.1| ATP-dependent Clp protease adaptor protein ClpS [Neisseria gonorrhoeae NCCP11945] gi|291044246|ref|ZP_06569955.1| ATP-dependent Clp protease adapter protein clpS [Neisseria gonorrhoeae DGI2] gi|293399443|ref|ZP_06643596.1| ATP-dependent Clp protease adaptor protein ClpS [Neisseria gonorrhoeae F62] gi|193933442|gb|ACF29266.1| ATP-dependent Clp protease adapter protein clpS [Neisseria gonorrhoeae NCCP11945] gi|291011140|gb|EFE03136.1| ATP-dependent Clp protease adapter protein clpS [Neisseria gonorrhoeae DGI2] gi|291610012|gb|EFF39134.1| ATP-dependent Clp protease adaptor protein ClpS [Neisseria gonorrhoeae F62] gi|317163877|gb|ADV07418.1| ATP-dependent Clp protease adaptor protein ClpS [Neisseria gonorrhoeae TCDC-NG08107] Length = 137 Score = 143 bits (360), Expect = 1e-32, Method: Composition-based stats. Identities = 43/111 (38%), Positives = 58/111 (52%) Query: 27 MADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKD 86 M R + G A + PK Y V L+ND+YT MEFV+ +L F Sbjct: 26 MPSERGFQMGHAMTAQHQSDTLLHRLNTLPPKRYGVFLLNDDYTTMEFVVEILTEIFMLG 85 Query: 87 HETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 E A +ML VHH+G G CG Y +IA+ K QVM ++ +PLQCI+E+ Sbjct: 86 QEQAVAVMLSVHHEGKGLCGTYTRDIAQTKQQQVMQRAKAEGHPLQCIVEE 136 >gi|94263020|ref|ZP_01286839.1| ATP-dependent Clp protease adaptor protein ClpS [delta proteobacterium MLMS-1] gi|93456563|gb|EAT06671.1| ATP-dependent Clp protease adaptor protein ClpS [delta proteobacterium MLMS-1] Length = 103 Score = 143 bits (360), Expect = 1e-32, Method: Composition-based stats. Identities = 42/101 (41%), Positives = 61/101 (60%) Query: 38 AEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKV 97 + + +R P LY+VLL ND+YT M+FV+ VL+ F+ D A IM+ V Sbjct: 3 STEQHDHGVVTEKQQDLRRPPLYKVLLHNDDYTTMDFVVMVLEMVFHHDQAAAHRIMMNV 62 Query: 98 HHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 H +G+G GVY + AE KV V N +R+H+YPL+C +EQ+ Sbjct: 63 HREGVGVAGVYPRDSAETKVAMVHNLARKHEYPLKCSLEQE 103 >gi|206889423|ref|YP_002249321.1| ATP-dependent Clp protease adaptor protein ClpS [Thermodesulfovibrio yellowstonii DSM 11347] gi|206741361|gb|ACI20418.1| ATP-dependent Clp protease adaptor protein ClpS [Thermodesulfovibrio yellowstonii DSM 11347] Length = 101 Score = 142 bits (359), Expect = 1e-32, Method: Composition-based stats. Identities = 40/91 (43%), Positives = 56/91 (61%) Query: 47 EVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECG 106 + + + P+LYRV L+ND+YT M+FV++VL F K A IML VH G G G Sbjct: 8 DEKEEISIDRPELYRVYLLNDDYTTMDFVVYVLMTIFDKSKVEATAIMLHVHKHGKGLAG 67 Query: 107 VYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +Y EIAE KV QV + +R +PL+C +E+ Sbjct: 68 IYPKEIAETKVYQVESLARAKGFPLKCSIER 98 >gi|326405326|ref|YP_004285408.1| ATP-dependent Clp protease adaptor protein ClpS [Acidiphilium multivorum AIU301] gi|325052188|dbj|BAJ82526.1| ATP-dependent Clp protease adaptor protein ClpS [Acidiphilium multivorum AIU301] Length = 106 Score = 142 bits (359), Expect = 1e-32, Method: Composition-based stats. Identities = 40/90 (44%), Positives = 63/90 (70%) Query: 48 VRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGV 107 + ++ + P LYRV++ ND+YTPMEFV+ L F K + A I L++H +G+G CG+ Sbjct: 16 TQARARAKRPPLYRVMMFNDDYTPMEFVVATLVGLFGKTTDEAGRIALRIHRRGVGVCGI 75 Query: 108 YAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 + YEIAE K+ QV+ +R++Q+PLQC++E Sbjct: 76 FTYEIAETKMIQVLELARENQHPLQCMIEP 105 >gi|303249375|ref|ZP_07335601.1| ATP-dependent Clp protease adaptor protein ClpS [Desulfovibrio fructosovorans JJ] gi|302489213|gb|EFL49178.1| ATP-dependent Clp protease adaptor protein ClpS [Desulfovibrio fructosovorans JJ] Length = 104 Score = 142 bits (358), Expect = 2e-32, Method: Composition-based stats. Identities = 40/78 (51%), Positives = 55/78 (70%) Query: 60 YRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQ 119 Y+VLL ND+YT MEFVI VL F+K+ A IML VH+ G+G CG Y E+AE+KV+ Sbjct: 26 YKVLLHNDDYTTMEFVIQVLVGVFHKNENEATQIMLNVHNNGVGVCGEYTAEVAELKVSL 85 Query: 120 VMNYSRQHQYPLQCIMEQ 137 V ++++ YPL+C ME+ Sbjct: 86 VHRLAKENGYPLKCSMEE 103 >gi|325267632|ref|ZP_08134284.1| ATP-dependent Clp protease adaptor protein ClpS [Kingella denitrificans ATCC 33394] gi|324980982|gb|EGC16642.1| ATP-dependent Clp protease adaptor protein ClpS [Kingella denitrificans ATCC 33394] Length = 100 Score = 142 bits (358), Expect = 2e-32, Method: Composition-based stats. Identities = 40/91 (43%), Positives = 61/91 (67%) Query: 47 EVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECG 106 ++ K+ PK Y V+L+ND+YTPM+FV+ VL F +HE A +ML++HH+G G CG Sbjct: 7 KIIQRQKLTPPKRYAVVLLNDHYTPMDFVVAVLTEIFALNHEKAVAVMLQIHHEGSGVCG 66 Query: 107 VYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 VY +IAE K QV+ + + +PL CI+++ Sbjct: 67 VYTRDIAETKRQQVLQAADEAGHPLMCIVQE 97 >gi|222149341|ref|YP_002550298.1| ATP-dependent Clp protease adaptor [Agrobacterium vitis S4] gi|221736325|gb|ACM37288.1| conserved hypothetical protein [Agrobacterium vitis S4] Length = 103 Score = 142 bits (358), Expect = 2e-32, Method: Composition-based stats. Identities = 31/94 (32%), Positives = 50/94 (53%) Query: 45 DSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGE 104 +V+ K+ P+LY+V+L ND+YTP EFV VL+ F ET +M+ H G Sbjct: 9 QPKVKTRPKLEQPRLYKVILTNDDYTPREFVTIVLKAVFRMSEETGNRVMMTAHRFGSAV 68 Query: 105 CGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 V +IAE K + + +++ +PL +E + Sbjct: 69 VVVCTRDIAETKSTEANDLAKEAGFPLLFTIEPE 102 >gi|212703188|ref|ZP_03311316.1| hypothetical protein DESPIG_01230 [Desulfovibrio piger ATCC 29098] gi|212673454|gb|EEB33937.1| hypothetical protein DESPIG_01230 [Desulfovibrio piger ATCC 29098] Length = 106 Score = 142 bits (358), Expect = 2e-32, Method: Composition-based stats. Identities = 51/111 (45%), Positives = 66/111 (59%), Gaps = 7/111 (6%) Query: 27 MADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKD 86 MAD N+ G D+ K++ P Y VLL ND+YT M+FV+ VL + F+K Sbjct: 1 MADETWNEPGT-------DTATIVKKKIKEPDRYVVLLHNDDYTSMDFVVGVLCDIFHKT 53 Query: 87 HETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 E A IML VH QGIG+CGVY +EIAE KV V +R +PL+C ME+ Sbjct: 54 PEEATAIMLAVHQQGIGQCGVYTHEIAETKVALVRRRARAAGFPLRCTMEK 104 >gi|296273990|ref|YP_003656621.1| ATP-dependent Clp protease adaptor protein ClpS [Arcobacter nitrofigilis DSM 7299] gi|296098164|gb|ADG94114.1| ATP-dependent Clp protease adaptor protein ClpS [Arcobacter nitrofigilis DSM 7299] Length = 99 Score = 142 bits (358), Expect = 2e-32, Method: Composition-based stats. Identities = 44/97 (45%), Positives = 62/97 (63%) Query: 42 NCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQG 101 N + E+ +V+ PK Y+VLL+NDNY+ M+FVI +L F K + A IML +H+ G Sbjct: 3 NEFEIELNDDLEVQEPKKYKVLLLNDNYSTMDFVIDILVKIFKKTTDEATVIMLNIHNNG 62 Query: 102 IGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 CG Y +EIA KV QV N +RQ +PL+ IME++ Sbjct: 63 KEVCGTYTHEIASTKVMQVKNLARQKGFPLKAIMEEE 99 >gi|296315334|ref|ZP_06865275.1| ATP-dependent Clp protease adaptor protein ClpS [Neisseria polysaccharea ATCC 43768] gi|296837710|gb|EFH21648.1| ATP-dependent Clp protease adaptor protein ClpS [Neisseria polysaccharea ATCC 43768] Length = 100 Score = 141 bits (357), Expect = 2e-32, Method: Composition-based stats. Identities = 40/85 (47%), Positives = 53/85 (62%) Query: 53 KVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEI 112 K PK Y V L+ND+YT MEFV+ +L F E A +ML VHH+G G CG Y +I Sbjct: 15 KTLPPKRYGVFLLNDDYTTMEFVVEILTEIFMLGQEQAVAVMLLVHHEGKGLCGTYTRDI 74 Query: 113 AEMKVNQVMNYSRQHQYPLQCIMEQ 137 A+ K QVM ++ +PLQCI+E+ Sbjct: 75 AQTKQQQVMQRAKAEGHPLQCIVEE 99 >gi|313668693|ref|YP_004048977.1| atp-dependent Clp protease adaptor protein ClpS [Neisseria lactamica ST-640] gi|313006155|emb|CBN87616.1| atp-dependent Clp protease adaptor protein ClpS [Neisseria lactamica 020-06] Length = 128 Score = 141 bits (357), Expect = 2e-32, Method: Composition-based stats. Identities = 43/111 (38%), Positives = 60/111 (54%) Query: 27 MADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKD 86 M R + G A + + PK Y V L+ND+YT MEFV+ +L F Sbjct: 17 MPSERGFQMGHAMTAQHQSDTLLHRLDTQPPKRYGVFLLNDDYTTMEFVVEILTEIFMLG 76 Query: 87 HETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 E A +ML VHH+G G CG Y +IA+ K QVM+ ++ +PLQCI+E+ Sbjct: 77 QEQAVAVMLLVHHEGKGLCGTYTRDIAQTKQRQVMDRAKAEGHPLQCIIEE 127 >gi|294668967|ref|ZP_06734054.1| ATP-dependent Clp protease adaptor protein ClpS [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291309140|gb|EFE50383.1| ATP-dependent Clp protease adaptor protein ClpS [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 101 Score = 141 bits (357), Expect = 2e-32, Method: Composition-based stats. Identities = 37/85 (43%), Positives = 55/85 (64%) Query: 53 KVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEI 112 ++R P+ Y V L+ND+YT M+FV+ VL F + A +ML VHH+G G CGVY +I Sbjct: 15 QLRPPRKYGVFLLNDDYTTMDFVVEVLTEVFRLPEDRAVAVMLLVHHEGKGLCGVYTRDI 74 Query: 113 AEMKVNQVMNYSRQHQYPLQCIMEQ 137 A+ K QV + + +PL+CI+E+ Sbjct: 75 AQTKQMQVHHRAEDAGFPLKCILEE 99 >gi|51244739|ref|YP_064623.1| hypothetical protein DP0887 [Desulfotalea psychrophila LSv54] gi|67460264|sp|Q6APV7|CLPS_DESPS RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|50875776|emb|CAG35616.1| conserved hypothetical protein [Desulfotalea psychrophila LSv54] Length = 102 Score = 141 bits (357), Expect = 2e-32, Method: Composition-based stats. Identities = 40/102 (39%), Positives = 60/102 (58%) Query: 37 IAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLK 96 + E DS + R P +YRVL+ ND+YT M+FV+ +L F K A+ IML Sbjct: 1 MTEDKQQSDSATIDDIETREPPMYRVLIHNDDYTSMDFVVAILMQIFSKTEAVAEEIMLT 60 Query: 97 VHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 VH +G G+Y +EIAE KV V + Q+++PL+C +E++ Sbjct: 61 VHSSEVGVAGLYTHEIAETKVAIVHQLAEQNEFPLRCSLEKE 102 >gi|92114559|ref|YP_574487.1| ATP-dependent Clp protease adaptor protein ClpS [Chromohalobacter salexigens DSM 3043] gi|91797649|gb|ABE59788.1| ATP-dependent Clp protease adaptor protein ClpS [Chromohalobacter salexigens DSM 3043] Length = 131 Score = 141 bits (356), Expect = 3e-32, Method: Composition-based stats. Identities = 38/87 (43%), Positives = 59/87 (67%) Query: 51 SSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAY 110 ++ P +Y+V+L ND++TPMEFV+ VLQ+FF + E A +ML VH G CG++ Sbjct: 43 DPELAQPPMYKVVLHNDDFTPMEFVVEVLQSFFAMEREKAVQVMLVVHTHGKATCGIFTR 102 Query: 111 EIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +IAE K +QV Y+R+ Q+PL C +++ Sbjct: 103 DIAETKCHQVNEYARECQHPLLCDIDK 129 >gi|82523955|emb|CAI78766.1| ATP-dependent Clp protease adaptor protein ClpS [uncultured epsilon proteobacterium] Length = 99 Score = 141 bits (356), Expect = 3e-32, Method: Composition-based stats. Identities = 40/97 (41%), Positives = 62/97 (63%) Query: 42 NCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQG 101 + E + ++ PK Y+V ++ND+YT M+FV+ VL F+K +E ++ IML+VH + Sbjct: 3 TNTELEPVEKTLLQYPKKYKVFILNDDYTSMDFVVDVLMTIFHKSYEESEAIMLEVHKKD 62 Query: 102 IGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 G CGVY +EIAE KV QV +R +PL+ ME++ Sbjct: 63 RGLCGVYTHEIAETKVMQVHKKARDSGFPLKSTMEEE 99 >gi|227822866|ref|YP_002826838.1| ATP-dependent Clp protease adaptor [Sinorhizobium fredii NGR234] gi|227341867|gb|ACP26085.1| ATP-dependent Clp protease adaptor protein ClpS [Sinorhizobium fredii NGR234] Length = 103 Score = 141 bits (356), Expect = 3e-32, Method: Composition-based stats. Identities = 31/102 (30%), Positives = 53/102 (51%) Query: 37 IAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLK 96 +++ + + R K+ P+LY+V+LVND+YTP +FV+ VL+ F E +M+ Sbjct: 1 MSDNEVAPKRKTRVKPKLERPRLYKVILVNDDYTPRDFVVMVLKAIFRMSEEAGYRVMMT 60 Query: 97 VHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 H G V A +IAE K + + ++ +PL E + Sbjct: 61 AHKLGTSVVVVCARDIAETKAKEATDLGKEAGFPLMFTTEPE 102 >gi|261377437|ref|ZP_05982010.1| ATP-dependent Clp protease adaptor protein ClpS [Neisseria cinerea ATCC 14685] gi|269146155|gb|EEZ72573.1| ATP-dependent Clp protease adaptor protein ClpS [Neisseria cinerea ATCC 14685] Length = 100 Score = 141 bits (356), Expect = 3e-32, Method: Composition-based stats. Identities = 39/82 (47%), Positives = 52/82 (63%) Query: 56 VPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEM 115 PK Y V L+ND+YT MEFV+ +L F E A +ML VHH+G G CG Y +IA+ Sbjct: 18 PPKRYGVFLLNDDYTTMEFVVEILTEIFMLGQEQAVAVMLLVHHEGKGLCGTYTRDIAQT 77 Query: 116 KVNQVMNYSRQHQYPLQCIMEQ 137 K QVM ++ +PLQCI+E+ Sbjct: 78 KQQQVMQRAKAEGHPLQCIVEE 99 >gi|146339195|ref|YP_001204243.1| ATP-dependent Clp protease adaptor [Bradyrhizobium sp. ORS278] gi|146192001|emb|CAL76006.1| ATP-dependent Clp protease adaptor protein clpS 2 [Bradyrhizobium sp. ORS278] Length = 115 Score = 141 bits (356), Expect = 3e-32, Method: Composition-based stats. Identities = 30/111 (27%), Positives = 56/111 (50%) Query: 28 ADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDH 87 + + + D + + +KV P+LY+V+LVND++TP +FV+ +L+ F Sbjct: 4 PPQQEHTGAPSMNDAVTKPKTKVRTKVERPRLYKVILVNDDFTPRDFVVMILKAEFRMTE 63 Query: 88 ETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 + A +M+ H G+ V+ ++AE K + + R YPL +E + Sbjct: 64 DQAYKVMITAHKLGVCVVAVFTKDVAETKATRATDAGRAKGYPLLFTIEPE 114 >gi|239998603|ref|ZP_04718527.1| ATP-dependent Clp protease adaptor protein ClpS [Neisseria gonorrhoeae 35/02] gi|240013726|ref|ZP_04720639.1| ATP-dependent Clp protease adaptor protein ClpS [Neisseria gonorrhoeae DGI18] gi|240016164|ref|ZP_04722704.1| ATP-dependent Clp protease adaptor protein ClpS [Neisseria gonorrhoeae FA6140] gi|240080308|ref|ZP_04724851.1| ATP-dependent Clp protease adaptor protein ClpS [Neisseria gonorrhoeae FA19] gi|240112519|ref|ZP_04727009.1| ATP-dependent Clp protease adaptor protein ClpS [Neisseria gonorrhoeae MS11] gi|240115259|ref|ZP_04729321.1| ATP-dependent Clp protease adaptor protein ClpS [Neisseria gonorrhoeae PID18] gi|240117546|ref|ZP_04731608.1| ATP-dependent Clp protease adaptor protein ClpS [Neisseria gonorrhoeae PID1] gi|240120796|ref|ZP_04733758.1| ATP-dependent Clp protease adaptor protein ClpS [Neisseria gonorrhoeae PID24-1] gi|240123101|ref|ZP_04736057.1| ATP-dependent Clp protease adaptor protein ClpS [Neisseria gonorrhoeae PID332] gi|240125352|ref|ZP_04738238.1| ATP-dependent Clp protease adaptor protein ClpS [Neisseria gonorrhoeae SK-92-679] gi|240127805|ref|ZP_04740466.1| ATP-dependent Clp protease adaptor protein ClpS [Neisseria gonorrhoeae SK-93-1035] gi|254493323|ref|ZP_05106494.1| ATP-dependent Clp protease adapter protein clpS [Neisseria gonorrhoeae 1291] gi|260440923|ref|ZP_05794739.1| ATP-dependent Clp protease adaptor protein ClpS [Neisseria gonorrhoeae DGI2] gi|268594461|ref|ZP_06128628.1| ATP-dependent Clp protease adapter protein clpS [Neisseria gonorrhoeae 35/02] gi|268596457|ref|ZP_06130624.1| ATP-dependent Clp protease adapter protein clpS [Neisseria gonorrhoeae FA19] gi|268598589|ref|ZP_06132756.1| ATP-dependent Clp protease adapter protein clpS [Neisseria gonorrhoeae MS11] gi|268600942|ref|ZP_06135109.1| ATP-dependent Clp protease adapter protein clpS [Neisseria gonorrhoeae PID18] gi|268603249|ref|ZP_06137416.1| conserved hypothetical protein [Neisseria gonorrhoeae PID1] gi|268681729|ref|ZP_06148591.1| ATP-dependent Clp protease adapter protein clpS [Neisseria gonorrhoeae PID332] gi|268683956|ref|ZP_06150818.1| ATP-dependent Clp protease adapter protein clpS [Neisseria gonorrhoeae SK-92-679] gi|268686201|ref|ZP_06153063.1| ATP-dependent Clp protease adapter protein clpS [Neisseria gonorrhoeae SK-93-1035] gi|226512363|gb|EEH61708.1| ATP-dependent Clp protease adapter protein clpS [Neisseria gonorrhoeae 1291] gi|268547850|gb|EEZ43268.1| ATP-dependent Clp protease adapter protein clpS [Neisseria gonorrhoeae 35/02] gi|268550245|gb|EEZ45264.1| ATP-dependent Clp protease adapter protein clpS [Neisseria gonorrhoeae FA19] gi|268582720|gb|EEZ47396.1| ATP-dependent Clp protease adapter protein clpS [Neisseria gonorrhoeae MS11] gi|268585073|gb|EEZ49749.1| ATP-dependent Clp protease adapter protein clpS [Neisseria gonorrhoeae PID18] gi|268587380|gb|EEZ52056.1| conserved hypothetical protein [Neisseria gonorrhoeae PID1] gi|268622013|gb|EEZ54413.1| ATP-dependent Clp protease adapter protein clpS [Neisseria gonorrhoeae PID332] gi|268624240|gb|EEZ56640.1| ATP-dependent Clp protease adapter protein clpS [Neisseria gonorrhoeae SK-92-679] gi|268626485|gb|EEZ58885.1| ATP-dependent Clp protease adapter protein clpS [Neisseria gonorrhoeae SK-93-1035] Length = 112 Score = 141 bits (356), Expect = 3e-32, Method: Composition-based stats. Identities = 43/111 (38%), Positives = 58/111 (52%) Query: 27 MADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKD 86 M R + G A + PK Y V L+ND+YT MEFV+ +L F Sbjct: 1 MPSERGFQMGHAMTAQHQSDTLLHRLNTLPPKRYGVFLLNDDYTTMEFVVEILTEIFMLG 60 Query: 87 HETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 E A +ML VHH+G G CG Y +IA+ K QVM ++ +PLQCI+E+ Sbjct: 61 QEQAVAVMLSVHHEGKGLCGTYTRDIAQTKQQQVMQRAKAEGHPLQCIVEE 111 >gi|313683054|ref|YP_004060792.1| ATP-dependent clp protease adaptor protein clps [Sulfuricurvum kujiense DSM 16994] gi|313155914|gb|ADR34592.1| ATP-dependent Clp protease adaptor protein ClpS [Sulfuricurvum kujiense DSM 16994] Length = 99 Score = 141 bits (356), Expect = 3e-32, Method: Composition-based stats. Identities = 40/96 (41%), Positives = 60/96 (62%) Query: 42 NCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQG 101 + + + + PK Y V L+ND+YT M+FV+ +L F K+ A IM++VH G Sbjct: 3 TQHEHSTQLENILEHPKQYNVFLLNDDYTSMDFVVDILMKLFRKNFHDAHRIMIEVHQNG 62 Query: 102 IGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 G CGVY YE+AE KV+QV +R++ +PL+ IME+ Sbjct: 63 RGLCGVYPYEVAETKVHQVSILARENGFPLKAIMEE 98 >gi|254417766|ref|ZP_05031490.1| ATP-dependent Clp protease adaptor protein ClpS [Brevundimonas sp. BAL3] gi|196183943|gb|EDX78919.1| ATP-dependent Clp protease adaptor protein ClpS [Brevundimonas sp. BAL3] Length = 77 Score = 141 bits (355), Expect = 4e-32, Method: Composition-based stats. Identities = 43/76 (56%), Positives = 59/76 (77%) Query: 62 VLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVM 121 +L++ND+Y+PMEFV++VL+ FF K E A IML VH G+G CGV+ YE+AE KV QV+ Sbjct: 1 MLILNDDYSPMEFVVYVLERFFQKSREEATRIMLHVHQHGVGVCGVFTYEVAETKVAQVI 60 Query: 122 NYSRQHQYPLQCIMEQ 137 +R+HQ+PLQC ME+ Sbjct: 61 ETARRHQHPLQCTMEK 76 >gi|110634479|ref|YP_674687.1| ATP-dependent Clp protease adaptor [Mesorhizobium sp. BNC1] gi|110285463|gb|ABG63522.1| ATP-dependent Clp protease adaptor protein ClpS [Chelativorans sp. BNC1] Length = 101 Score = 140 bits (354), Expect = 5e-32, Method: Composition-based stats. Identities = 34/99 (34%), Positives = 53/99 (53%) Query: 40 FDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHH 99 D L + KV PKL++V+LVND++TP EFV+ VL+ F + + A +M+ H Sbjct: 2 SDIVLKPRTKTKPKVDKPKLHKVILVNDDFTPREFVVRVLKAEFRLNQDQAYRVMITAHR 61 Query: 100 QGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 +G V+ +IAE K + + R+ YPL E + Sbjct: 62 RGTCVVAVFPKDIAETKATRATDAGRKAGYPLLFTTEPE 100 >gi|59800852|ref|YP_207564.1| hypothetical protein NGO0409 [Neisseria gonorrhoeae FA 1090] gi|67460149|sp|Q5F9I5|CLPS_NEIG1 RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|59717747|gb|AAW89152.1| conserved hypothetical protein [Neisseria gonorrhoeae FA 1090] Length = 100 Score = 140 bits (354), Expect = 5e-32, Method: Composition-based stats. Identities = 39/82 (47%), Positives = 52/82 (63%) Query: 56 VPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEM 115 PK Y V L+ND+YT MEFV+ +L F E A +ML VHH+G G CG Y +IA+ Sbjct: 18 PPKRYGVFLLNDDYTTMEFVVEILTEIFMLGQEQAVAVMLSVHHEGKGLCGTYTRDIAQT 77 Query: 116 KVNQVMNYSRQHQYPLQCIMEQ 137 K QVM ++ +PLQCI+E+ Sbjct: 78 KQQQVMQRAKAEGHPLQCIVEE 99 >gi|118475182|ref|YP_891885.1| ATP-dependent Clp protease adaptor protein ClpS [Campylobacter fetus subsp. fetus 82-40] gi|118414408|gb|ABK82828.1| ATP-dependent Clp protease adaptor protein ClpS [Campylobacter fetus subsp. fetus 82-40] Length = 99 Score = 140 bits (354), Expect = 5e-32, Method: Composition-based stats. Identities = 33/91 (36%), Positives = 57/91 (62%) Query: 48 VRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGV 107 + K P L++V+L+ND T M+FV+ +L + F K A +MLK+H G CG+ Sbjct: 9 TKTKIKDFKPNLFKVMLLNDEVTTMDFVVMILIDIFNKSKNEAIELMLKIHQSGRAICGI 68 Query: 108 YAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 Y EIA+ K +V+N ++ + +PL+C++E++ Sbjct: 69 YTKEIAQTKQMEVLNLAKANGFPLKCVIEEE 99 >gi|86157217|ref|YP_464002.1| ATP-dependent Clp protease adaptor protein ClpS [Anaeromyxobacter dehalogenans 2CP-C] gi|85773728|gb|ABC80565.1| ATP-dependent Clp protease adaptor protein ClpS [Anaeromyxobacter dehalogenans 2CP-C] Length = 108 Score = 140 bits (354), Expect = 5e-32, Method: Composition-based stats. Identities = 42/108 (38%), Positives = 62/108 (57%), Gaps = 1/108 (0%) Query: 32 MNKKGIAEFDNCLD-SEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETA 90 M ++ D + + R + + P LY+VLL ND+YT EFV +VL F D E+A Sbjct: 1 MAERTRPGGDTDVVVPKTRAERETKRPPLYKVLLHNDHYTTQEFVDYVLMTVFNHDPESA 60 Query: 91 KCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 IML VH G+G G+Y YEIAE K + ++ +R+ +YPL +E + Sbjct: 61 HRIMLHVHMHGVGVAGIYPYEIAETKARKTLDLAREAEYPLLVTIEPE 108 >gi|256829859|ref|YP_003158587.1| ATP-dependent Clp protease adaptor protein ClpS [Desulfomicrobium baculatum DSM 4028] gi|256579035|gb|ACU90171.1| ATP-dependent Clp protease adaptor protein ClpS [Desulfomicrobium baculatum DSM 4028] Length = 104 Score = 140 bits (354), Expect = 5e-32, Method: Composition-based stats. Identities = 39/93 (41%), Positives = 59/93 (63%) Query: 45 DSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGE 104 D ++ +++ P+ ++VLL ND+YT M+FV+ VL N F K + IM+ VH +GIG Sbjct: 11 DPDIMVEDQLQEPRQFKVLLHNDDYTSMDFVVEVLMNVFGKSESESFAIMMSVHEKGIGL 70 Query: 105 CGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 CG+Y E+AE KV V +R +PL+C ME+ Sbjct: 71 CGIYTAEVAETKVQLVHQMARARSFPLRCSMEE 103 >gi|261381146|ref|ZP_05985719.1| ATP-dependent Clp protease adaptor protein ClpS [Neisseria subflava NJ9703] gi|284795952|gb|EFC51299.1| ATP-dependent Clp protease adaptor protein ClpS [Neisseria subflava NJ9703] Length = 103 Score = 140 bits (354), Expect = 5e-32, Method: Composition-based stats. Identities = 40/100 (40%), Positives = 59/100 (59%), Gaps = 1/100 (1%) Query: 38 AEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKV 97 D+ D+ + + PK Y V L+ND+YT MEFV+ +L F E A +ML V Sbjct: 4 PNTDHQSDT-LLSDINTQPPKRYGVFLLNDDYTTMEFVVEILTEVFMLTQEQAVAVMLLV 62 Query: 98 HHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 HH+G G CG Y +IA+ K +QVM ++ +PL+CI+E+ Sbjct: 63 HHEGKGLCGTYTRDIAQTKQHQVMERAKAEGHPLKCIVEE 102 >gi|255527633|ref|ZP_05394494.1| ATP-dependent Clp protease adaptor protein ClpS [Clostridium carboxidivorans P7] gi|296185311|ref|ZP_06853721.1| ATP-dependent Clp protease adaptor protein ClpS [Clostridium carboxidivorans P7] gi|255508675|gb|EET85054.1| ATP-dependent Clp protease adaptor protein ClpS [Clostridium carboxidivorans P7] gi|296050145|gb|EFG89569.1| ATP-dependent Clp protease adaptor protein ClpS [Clostridium carboxidivorans P7] Length = 99 Score = 140 bits (354), Expect = 5e-32, Method: Composition-based stats. Identities = 38/90 (42%), Positives = 57/90 (63%) Query: 49 RFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVY 108 K+R PK+Y+V++ ND+YT MEFV+ +L F K A IM VH GIG G+Y Sbjct: 10 DTKIKIRKPKMYKVIIYNDDYTTMEFVVKILIEIFKKSVVEATKIMYDVHRSGIGIAGIY 69 Query: 109 AYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 +Y+IA K+ Q M+ SR+ +PL+ +E++ Sbjct: 70 SYDIAATKITQAMSASRESGFPLKFSIEEE 99 >gi|241205734|ref|YP_002976830.1| ATP-dependent Clp protease adaptor [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240859624|gb|ACS57291.1| ATP-dependent Clp protease adaptor protein ClpS [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 103 Score = 140 bits (353), Expect = 6e-32, Method: Composition-based stats. Identities = 35/102 (34%), Positives = 55/102 (53%) Query: 37 IAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLK 96 +++ D L + + K+ PKLY+V+LVND+YTP E VI +L+ F ET +M+ Sbjct: 1 MSDNDIALKPKTKVKPKLDKPKLYKVILVNDDYTPRELVIMILKAVFRMSEETGYRVMMT 60 Query: 97 VHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 H G V A +IAE K + ++ ++ YPL E + Sbjct: 61 AHKLGSCVVVVCAKDIAETKAKEGIDLAKGMGYPLMFTAEPE 102 >gi|197121252|ref|YP_002133203.1| ATP-dependent Clp protease adaptor protein ClpS [Anaeromyxobacter sp. K] gi|220915956|ref|YP_002491260.1| ATP-dependent Clp protease adaptor protein ClpS [Anaeromyxobacter dehalogenans 2CP-1] gi|196171101|gb|ACG72074.1| ATP-dependent Clp protease adaptor protein ClpS [Anaeromyxobacter sp. K] gi|219953810|gb|ACL64194.1| ATP-dependent Clp protease adaptor protein ClpS [Anaeromyxobacter dehalogenans 2CP-1] Length = 108 Score = 140 bits (353), Expect = 7e-32, Method: Composition-based stats. Identities = 44/108 (40%), Positives = 61/108 (56%), Gaps = 1/108 (0%) Query: 32 MNKKGIAEFDNCLD-SEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETA 90 M ++ D + + R + + P LYRVLL ND+YT EFV VL F D E+A Sbjct: 1 MAERTRPGGDTEVVVPKTRAERETKRPPLYRVLLHNDHYTTQEFVDFVLMTVFNHDPESA 60 Query: 91 KCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 IML VH G+G G+Y YEIAE K + M+ +R+ +YPL +E + Sbjct: 61 HRIMLHVHMHGVGVAGIYPYEIAETKARKTMDLAREAEYPLLVTIEPE 108 >gi|304387855|ref|ZP_07370029.1| ATP-dependent Clp protease adaptor protein ClpS [Neisseria meningitidis ATCC 13091] gi|304338120|gb|EFM04256.1| ATP-dependent Clp protease adaptor protein ClpS [Neisseria meningitidis ATCC 13091] Length = 112 Score = 140 bits (353), Expect = 7e-32, Method: Composition-based stats. Identities = 42/111 (37%), Positives = 57/111 (51%) Query: 27 MADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKD 86 M R + G + PK Y V L+ND+YT MEFV+ +L F Sbjct: 1 MPSERGFQMGHTMTAQHQSDTLLRRLNTLPPKRYGVFLLNDDYTTMEFVVEILTEIFMLG 60 Query: 87 HETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 E A +ML VHH+G G CG Y +IA+ K QVM ++ +PLQCI+E+ Sbjct: 61 QEQAVAVMLLVHHEGKGLCGTYTRDIAQTKQQQVMQRAKAEGHPLQCIVEE 111 >gi|297183971|gb|ADI20091.1| uncharacterized conserved protein [uncultured alpha proteobacterium EB080_L06A09] Length = 111 Score = 140 bits (353), Expect = 7e-32, Method: Composition-based stats. Identities = 45/110 (40%), Positives = 73/110 (66%), Gaps = 2/110 (1%) Query: 31 RMNKKGIAEFDNCLDSEVRFSSKVRVPK--LYRVLLVNDNYTPMEFVIHVLQNFFYKDHE 88 ++N+K I D +D + + + K +Y+VLL+ND+YTPMEFV+H+L+ +F Sbjct: 2 QINEKAIMSEDENIDVGLATKATPKTKKPKMYKVLLLNDDYTPMEFVVHILERYFGTSGS 61 Query: 89 TAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 A +M+ VH +G+ GV++++IAE KV QV +R+HQ+PLQC ME++ Sbjct: 62 QAYELMMVVHQKGLAVVGVFSHDIAETKVMQVTELARKHQHPLQCTMEKE 111 >gi|319956042|ref|YP_004167305.1| ATP-dependent clp protease adaptor protein clps [Nitratifractor salsuginis DSM 16511] gi|319418446|gb|ADV45556.1| ATP-dependent Clp protease adaptor protein ClpS [Nitratifractor salsuginis DSM 16511] Length = 99 Score = 140 bits (353), Expect = 8e-32, Method: Composition-based stats. Identities = 43/80 (53%), Positives = 55/80 (68%) Query: 57 PKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMK 116 P+LYRV+L ND+YT MEFVI VL++ F+K A+ IM VH +G CGVY YEIAE K Sbjct: 17 PELYRVILHNDDYTTMEFVIDVLRSIFHKSTREAEEIMWTVHEKGQAVCGVYTYEIAETK 76 Query: 117 VNQVMNYSRQHQYPLQCIME 136 V QV +RQ+ +PL +E Sbjct: 77 VEQVKLKARQNGFPLLATLE 96 >gi|254804708|ref|YP_003082929.1| putative ATP-dependent Clp protease adaptor protein [Neisseria meningitidis alpha14] gi|254668250|emb|CBA05092.1| putative ATP-dependent Clp protease adaptor protein [Neisseria meningitidis alpha14] gi|308389011|gb|ADO31331.1| putative ATP-dependent Clp protease adaptor protein clpS [Neisseria meningitidis alpha710] gi|325127944|gb|EGC50846.1| ATP-dependent Clp protease adaptor protein ClpS [Neisseria meningitidis N1568] gi|325129979|gb|EGC52775.1| ATP-dependent Clp protease adaptor protein ClpS [Neisseria meningitidis OX99.30304] Length = 100 Score = 139 bits (352), Expect = 8e-32, Method: Composition-based stats. Identities = 39/82 (47%), Positives = 52/82 (63%) Query: 56 VPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEM 115 PK Y V L+ND+YT MEFV+ +L F E A +ML VHH+G G CG Y +IA+ Sbjct: 18 PPKRYGVFLLNDDYTTMEFVVEILTEIFMLGQEQAVAVMLLVHHEGKGLCGTYTRDIAQT 77 Query: 116 KVNQVMNYSRQHQYPLQCIMEQ 137 K QVM ++ +PLQCI+E+ Sbjct: 78 KQQQVMQRAKAEGHPLQCIVEE 99 >gi|309379405|emb|CBX21972.1| unnamed protein product [Neisseria lactamica Y92-1009] Length = 100 Score = 139 bits (352), Expect = 8e-32, Method: Composition-based stats. Identities = 39/90 (43%), Positives = 55/90 (61%) Query: 48 VRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGV 107 + + PK Y V L+ND+YT MEFV+ +L F E A +ML VHH+G G CG Sbjct: 10 LLHRLDTQPPKRYGVFLLNDDYTTMEFVVEILTEIFMLGQEQAVAVMLLVHHEGKGLCGT 69 Query: 108 YAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 Y +IA+ K QVM+ ++ +PLQCI+E+ Sbjct: 70 YTRDIAQTKQRQVMDRAKAEGHPLQCIVEE 99 >gi|15676733|ref|NP_273878.1| hypothetical protein NMB0837 [Neisseria meningitidis MC58] gi|121634615|ref|YP_974860.1| hypothetical protein NMC0775 [Neisseria meningitidis FAM18] gi|12230808|sp|Q9JZZ5|CLPS_NEIMB RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|7226071|gb|AAF41248.1| conserved hypothetical protein [Neisseria meningitidis MC58] gi|120866321|emb|CAM10062.1| putative ATP-dependent Clp protease adaptor protein clpS [Neisseria meningitidis FAM18] gi|254670466|emb|CBA06136.1| conserved hypothetical protein [Neisseria meningitidis alpha153] gi|254672383|emb|CBA05650.1| conserved hypothetical protein [Neisseria meningitidis alpha275] gi|261392811|emb|CAX50392.1| ATP-dependent Clp protease adaptor protein ClpS [Neisseria meningitidis 8013] gi|319410196|emb|CBY90534.1| ATP-dependent Clp protease adapter protein clpS [Neisseria meningitidis WUE 2594] gi|325132022|gb|EGC54720.1| ATP-dependent Clp protease adaptor protein ClpS [Neisseria meningitidis M6190] gi|325134027|gb|EGC56682.1| ATP-dependent Clp protease adaptor protein ClpS [Neisseria meningitidis M13399] gi|325135948|gb|EGC58558.1| ATP-dependent Clp protease adaptor protein ClpS [Neisseria meningitidis M0579] gi|325137776|gb|EGC60351.1| ATP-dependent Clp protease adaptor protein ClpS [Neisseria meningitidis ES14902] gi|325140015|gb|EGC62544.1| ATP-dependent Clp protease adaptor protein ClpS [Neisseria meningitidis CU385] gi|325144133|gb|EGC66440.1| ATP-dependent Clp protease adaptor protein ClpS [Neisseria meningitidis M01-240013] gi|325198040|gb|ADY93496.1| ATP-dependent Clp protease adaptor protein ClpS [Neisseria meningitidis G2136] gi|325200483|gb|ADY95938.1| ATP-dependent Clp protease adaptor protein ClpS [Neisseria meningitidis H44/76] gi|325202375|gb|ADY97829.1| ATP-dependent Clp protease adaptor protein ClpS [Neisseria meningitidis M01-240149] gi|325203908|gb|ADY99361.1| ATP-dependent Clp protease adaptor protein ClpS [Neisseria meningitidis M01-240355] gi|325206329|gb|ADZ01782.1| ATP-dependent Clp protease adaptor protein ClpS [Neisseria meningitidis M04-240196] gi|325207873|gb|ADZ03325.1| ATP-dependent Clp protease adaptor protein ClpS [Neisseria meningitidis NZ-05/33] Length = 100 Score = 139 bits (352), Expect = 1e-31, Method: Composition-based stats. Identities = 39/82 (47%), Positives = 52/82 (63%) Query: 56 VPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEM 115 PK Y V L+ND+YT MEFV+ +L F E A +ML VHH+G G CG Y +IA+ Sbjct: 18 PPKRYGVFLLNDDYTTMEFVVEILTEIFMLGQEQAVAVMLLVHHEGKGLCGTYTRDIAQT 77 Query: 116 KVNQVMNYSRQHQYPLQCIMEQ 137 K QVM ++ +PLQCI+E+ Sbjct: 78 KQQQVMQRAKAEGHPLQCIVEE 99 >gi|153952414|ref|YP_001397780.1| hypothetical protein JJD26997_0615 [Campylobacter jejuni subsp. doylei 269.97] gi|166214731|sp|A7H2Q0|CLPS_CAMJD RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|152939860|gb|ABS44601.1| conserved hypothetical protein [Campylobacter jejuni subsp. doylei 269.97] Length = 96 Score = 139 bits (351), Expect = 1e-31, Method: Composition-based stats. Identities = 37/95 (38%), Positives = 63/95 (66%) Query: 44 LDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIG 103 L ++ +K+ PK+Y+V+L+ND+ T M+FVI +L N F+++ E A ML++HH G G Sbjct: 2 LKTQTLEQTKLSEPKMYKVILLNDDVTTMDFVIEILMNIFHQNLEKASQTMLEIHHNGSG 61 Query: 104 ECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 CG+Y EIA K +V++ ++ +PLQ +E++ Sbjct: 62 ICGIYTQEIALSKQKKVIDAAKLANFPLQAKVEEE 96 >gi|329120145|ref|ZP_08248815.1| ATP-dependent Clp protease adaptor protein ClpS [Neisseria bacilliformis ATCC BAA-1200] gi|327463676|gb|EGF09994.1| ATP-dependent Clp protease adaptor protein ClpS [Neisseria bacilliformis ATCC BAA-1200] Length = 101 Score = 139 bits (351), Expect = 1e-31, Method: Composition-based stats. Identities = 34/85 (40%), Positives = 52/85 (61%) Query: 53 KVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEI 112 K+R P+ Y V L+ND+YT M+FV VL F+ + A +ML VHH+G G CG + ++ Sbjct: 15 KLRPPRKYGVFLLNDDYTTMDFVAQVLTEVFFLSEDRAFAVMLLVHHEGKGLCGTFTRDV 74 Query: 113 AEMKVNQVMNYSRQHQYPLQCIMEQ 137 A+ K QV + +PL+C +E+ Sbjct: 75 AQTKQAQVHRRAADAGFPLKCTIEE 99 >gi|261400156|ref|ZP_05986281.1| ATP-dependent Clp protease adaptor protein ClpS [Neisseria lactamica ATCC 23970] gi|269210155|gb|EEZ76610.1| ATP-dependent Clp protease adaptor protein ClpS [Neisseria lactamica ATCC 23970] Length = 112 Score = 139 bits (351), Expect = 1e-31, Method: Composition-based stats. Identities = 43/111 (38%), Positives = 60/111 (54%) Query: 27 MADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKD 86 M R + G A + + PK Y V L+ND+YT MEFV+ +L F Sbjct: 1 MPLERGFQMGHAMTAQHQSDTLLHRLDTQPPKRYGVFLLNDDYTTMEFVVEILTEIFMLG 60 Query: 87 HETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 E A +ML VHH+G G CG Y +IA+ K QVM+ ++ +PLQCI+E+ Sbjct: 61 QEQAVAVMLLVHHEGKGLCGTYTRDIAQTKQRQVMDMAKAEGHPLQCIVEE 111 >gi|148653394|ref|YP_001280487.1| ATP-dependent Clp protease adaptor protein ClpS [Psychrobacter sp. PRwf-1] gi|148572478|gb|ABQ94537.1| ATP-dependent Clp protease adaptor protein ClpS [Psychrobacter sp. PRwf-1] Length = 140 Score = 139 bits (351), Expect = 1e-31, Method: Composition-based stats. Identities = 36/86 (41%), Positives = 55/86 (63%) Query: 52 SKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYE 111 ++ P +Y V++ ND+YTPMEFV++VLQ+ F + + A IML +H+QG G G+Y + Sbjct: 51 PEITEPPMYAVVMYNDDYTPMEFVVYVLQSEFRHNMDKAVEIMLNIHNQGRGIAGIYPKD 110 Query: 112 IAEMKVNQVMNYSRQHQYPLQCIMEQ 137 IAE K +V +R+ YPL +E Sbjct: 111 IAETKAKKVNQTARKEGYPLLTQIEP 136 >gi|225023808|ref|ZP_03713000.1| hypothetical protein EIKCOROL_00673 [Eikenella corrodens ATCC 23834] gi|224943407|gb|EEG24616.1| hypothetical protein EIKCOROL_00673 [Eikenella corrodens ATCC 23834] Length = 101 Score = 139 bits (351), Expect = 1e-31, Method: Composition-based stats. Identities = 40/101 (39%), Positives = 62/101 (61%), Gaps = 1/101 (0%) Query: 37 IAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLK 96 +++ + L EV PK Y V L+ND+YTPM+FV+ +L + F A+ +ML+ Sbjct: 1 MSDTEQALRPEV-VRENAPPPKRYGVFLLNDDYTPMDFVVGLLTDIFRLTENRAEAVMLQ 59 Query: 97 VHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 VHH+G G CG+Y +IA+ K QV N +RQ +PL ++E+ Sbjct: 60 VHHEGKGLCGIYQKDIADTKHQQVQNLARQAGHPLLSMVEE 100 >gi|315179860|gb|ADT86774.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio furnissii NCTC 11218] Length = 80 Score = 139 bits (351), Expect = 1e-31, Method: Composition-based stats. Identities = 41/79 (51%), Positives = 57/79 (72%) Query: 59 LYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVN 118 +Y V+L ND+YTPM+FVI +L+ FF D E A +MLKVH++G CG + E+AE KV Sbjct: 1 MYNVVLNNDDYTPMDFVIEILERFFSMDIERATQVMLKVHYEGKAICGTFTAEVAETKVA 60 Query: 119 QVMNYSRQHQYPLQCIMEQ 137 QV YSR++++PL C ME+ Sbjct: 61 QVTMYSRENEHPLLCTMER 79 >gi|225075508|ref|ZP_03718707.1| hypothetical protein NEIFLAOT_00521 [Neisseria flavescens NRL30031/H210] gi|241758489|ref|ZP_04756608.1| ATP-dependent Clp protease adaptor protein ClpS [Neisseria flavescens SK114] gi|319637941|ref|ZP_07992707.1| ATP-dependent Clp protease adapter protein ClpS [Neisseria mucosa C102] gi|224953143|gb|EEG34352.1| hypothetical protein NEIFLAOT_00521 [Neisseria flavescens NRL30031/H210] gi|241321324|gb|EER57472.1| ATP-dependent Clp protease adaptor protein ClpS [Neisseria flavescens SK114] gi|317401096|gb|EFV81751.1| ATP-dependent Clp protease adapter protein ClpS [Neisseria mucosa C102] Length = 103 Score = 139 bits (351), Expect = 1e-31, Method: Composition-based stats. Identities = 40/100 (40%), Positives = 59/100 (59%), Gaps = 1/100 (1%) Query: 38 AEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKV 97 D+ D+ + + PK Y V L+ND+YT MEFV+ +L F E A +ML V Sbjct: 4 PNTDHQSDT-LLSDINTQPPKRYGVFLLNDDYTTMEFVVEILTEVFMLAQEQAVAVMLLV 62 Query: 98 HHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 HH+G G CG Y +IA+ K +QVM ++ +PL+CI+E+ Sbjct: 63 HHEGKGLCGTYTRDIAQTKQHQVMERAKAEGHPLKCIVEE 102 >gi|86748339|ref|YP_484835.1| ATP-dependent Clp protease adaptor [Rhodopseudomonas palustris HaA2] gi|86571367|gb|ABD05924.1| ATP-dependent Clp protease adaptor protein ClpS [Rhodopseudomonas palustris HaA2] Length = 101 Score = 139 bits (351), Expect = 1e-31, Method: Composition-based stats. Identities = 32/95 (33%), Positives = 51/95 (53%) Query: 44 LDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIG 103 + K+ PKLY+V+LVND++TP +FV+ +L++ F E A +ML H +G+ Sbjct: 6 TKPTAKAKPKLERPKLYKVILVNDDFTPRDFVVMILKSEFRMTEEQAYKVMLTAHQRGVC 65 Query: 104 ECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 V+ +IAE K + + R YPL E + Sbjct: 66 VVAVFTKDIAETKATRATDAGRAKGYPLLFTTEPE 100 >gi|257460421|ref|ZP_05625522.1| ATP-dependent Clp protease adaptor protein ClpS [Campylobacter gracilis RM3268] gi|257441752|gb|EEV16894.1| ATP-dependent Clp protease adaptor protein ClpS [Campylobacter gracilis RM3268] Length = 101 Score = 139 bits (351), Expect = 1e-31, Method: Composition-based stats. Identities = 36/96 (37%), Positives = 57/96 (59%) Query: 42 NCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQG 101 + R +K VP+ Y+V+L+ND+ T M+FV+++L F K+ A +M+KVH QG Sbjct: 5 TGVQIRTRAKTKSFVPRPYKVILLNDDVTTMDFVVYILMEIFAKNFNDAVDLMMKVHKQG 64 Query: 102 IGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 CG Y EIAE K V+ ++ +PL+C +E+ Sbjct: 65 RAVCGAYPKEIAECKQQAVLQAAKAAGFPLRCEIEE 100 >gi|315186429|gb|EFU20189.1| ATP-dependent Clp protease adaptor protein ClpS [Spirochaeta thermophila DSM 6578] Length = 115 Score = 139 bits (350), Expect = 1e-31, Method: Composition-based stats. Identities = 36/79 (45%), Positives = 53/79 (67%) Query: 59 LYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVN 118 +Y V+L+ND++TPMEFV+ +L + F+KD A IML VH G G+ Y Y+IA KV Sbjct: 36 MYWVVLLNDDFTPMEFVVDILVDIFHKDRVEATKIMLTVHRTGKGKVATYPYDIAVTKVA 95 Query: 119 QVMNYSRQHQYPLQCIMEQ 137 QV +R+ +PL+C +E+ Sbjct: 96 QVHRRAREAGHPLRCTVEK 114 >gi|86150870|ref|ZP_01069086.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni 260.94] gi|85842040|gb|EAQ59286.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni 260.94] Length = 96 Score = 139 bits (350), Expect = 2e-31, Method: Composition-based stats. Identities = 37/94 (39%), Positives = 62/94 (65%) Query: 45 DSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGE 104 ++ +K+ PK+Y+V+L+ND+ T M+FVI +L N F+++ E A MLK+HH G G Sbjct: 3 KTQTLEQTKLSEPKMYKVILLNDDVTTMDFVIEILMNIFHQNLEKASQTMLKIHHNGSGI 62 Query: 105 CGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 CG+Y EIA K +V++ ++ +PLQ +E++ Sbjct: 63 CGIYTQEIALSKQKKVIDAAKLANFPLQVKVEEE 96 >gi|86152758|ref|ZP_01070963.1| ATP-dependent Clp protease adaptor protein ClpS [Campylobacter jejuni subsp. jejuni HB93-13] gi|121612672|ref|YP_001000785.1| hypothetical protein CJJ81176_1125 [Campylobacter jejuni subsp. jejuni 81-176] gi|157415368|ref|YP_001482624.1| hypothetical protein C8J_1048 [Campylobacter jejuni subsp. jejuni 81116] gi|167005700|ref|ZP_02271458.1| hypothetical protein Cjejjejuni_05870 [Campylobacter jejuni subsp. jejuni 81-176] gi|283956504|ref|ZP_06373984.1| hypothetical protein C1336_000250281 [Campylobacter jejuni subsp. jejuni 1336] gi|166214732|sp|A1W094|CLPS_CAMJJ RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|172047149|sp|A8FMG0|CLPS_CAMJ8 RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|85843643|gb|EAQ60853.1| ATP-dependent Clp protease adaptor protein ClpS [Campylobacter jejuni subsp. jejuni HB93-13] gi|87249258|gb|EAQ72219.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni 81-176] gi|157386332|gb|ABV52647.1| hypothetical protein C8J_1048 [Campylobacter jejuni subsp. jejuni 81116] gi|283792224|gb|EFC31013.1| hypothetical protein C1336_000250281 [Campylobacter jejuni subsp. jejuni 1336] gi|307748009|gb|ADN91279.1| ATP-dependent Clp protease adapter protein clpS [Campylobacter jejuni subsp. jejuni M1] gi|315932245|gb|EFV11188.1| ATP-dependent Clp protease adaptor protein ClpS family protein [Campylobacter jejuni subsp. jejuni 327] Length = 96 Score = 139 bits (350), Expect = 2e-31, Method: Composition-based stats. Identities = 36/94 (38%), Positives = 62/94 (65%) Query: 45 DSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGE 104 ++ +K+ PK+Y+V+L+ND+ T M+FVI +L N F+++ E A ML++HH G G Sbjct: 3 KTQTLEQTKLSEPKMYKVILLNDDVTTMDFVIEILMNIFHQNLEKASQTMLEIHHNGSGI 62 Query: 105 CGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 CG+Y EIA K +V++ ++ +PLQ +E++ Sbjct: 63 CGIYTQEIALSKQKKVIDAAKLANFPLQAKVEEE 96 >gi|315929892|gb|EFV09052.1| ATP-dependent Clp protease adaptor protein ClpS family protein [Campylobacter jejuni subsp. jejuni 305] Length = 96 Score = 139 bits (350), Expect = 2e-31, Method: Composition-based stats. Identities = 36/94 (38%), Positives = 62/94 (65%) Query: 45 DSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGE 104 ++ +K+ PK+Y+V+L+ND+ T M+FVI +L N F+++ E A ML++HH G G Sbjct: 3 KTQTLEQTKLSEPKMYKVILLNDDVTTMDFVIEILMNIFHQNPEKASQTMLEIHHNGSGI 62 Query: 105 CGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 CG+Y EIA K +V++ ++ +PLQ +E++ Sbjct: 63 CGIYTQEIALSKQKKVIDAAKLANFPLQAKVEEE 96 >gi|317051275|ref|YP_004112391.1| ATP-dependent Clp protease adaptor protein ClpS [Desulfurispirillum indicum S5] gi|316946359|gb|ADU65835.1| ATP-dependent Clp protease adaptor protein ClpS [Desulfurispirillum indicum S5] Length = 100 Score = 139 bits (350), Expect = 2e-31, Method: Composition-based stats. Identities = 37/91 (40%), Positives = 54/91 (59%) Query: 47 EVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECG 106 E V+ P+ Y VLL+ND+++ +FV+ VL F K + A I VHH G G CG Sbjct: 9 EEELDLAVKEPRPYMVLLLNDDFSTWDFVVEVLVRVFRKTRDDADKITYHVHHNGQGVCG 68 Query: 107 VYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +Y +EIA+ KV QV ++ YPL+C+M + Sbjct: 69 IYPFEIAQTKVQQVHELAKSRGYPLRCVMRE 99 >gi|148253958|ref|YP_001238543.1| ATP-dependent Clp protease adaptor [Bradyrhizobium sp. BTAi1] gi|146406131|gb|ABQ34637.1| ATP-dependent Clp protease adaptor protein clpS 2 [Bradyrhizobium sp. BTAi1] Length = 115 Score = 138 bits (349), Expect = 2e-31, Method: Composition-based stats. Identities = 30/99 (30%), Positives = 53/99 (53%) Query: 40 FDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHH 99 D + + +KV P+LY+V+LVND++TP +FV+ +L++ F + A +M+ H Sbjct: 16 NDAVTKPKTKVRTKVERPRLYKVILVNDDFTPRDFVVMILKSEFRMTEDQAYKVMITAHK 75 Query: 100 QGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 G+ V+ ++AE K + + R YPL E + Sbjct: 76 LGVCVVAVFTKDVAETKATRATDAGRAKGYPLLFTTEPE 114 >gi|75674828|ref|YP_317249.1| ATP-dependent Clp protease adaptor [Nitrobacter winogradskyi Nb-255] gi|74419698|gb|ABA03897.1| ATP-dependent Clp protease adaptor protein ClpS [Nitrobacter winogradskyi Nb-255] Length = 101 Score = 138 bits (349), Expect = 2e-31, Method: Composition-based stats. Identities = 31/99 (31%), Positives = 50/99 (50%) Query: 40 FDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHH 99 D + ++ +K+ P+LY+V+L ND++TP EFV+ VL F A +M+ Sbjct: 2 SDIAIKPRIKAETKIERPRLYKVILHNDDFTPREFVVAVLMAEFNMTDGQAHKVMITADR 61 Query: 100 QGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 G GV+A +IAE K + + R +PL E + Sbjct: 62 LGSCVVGVFARDIAETKATRATDAGRSMGFPLLFTTEPE 100 >gi|153954954|ref|YP_001395719.1| ClpS [Clostridium kluyveri DSM 555] gi|146347812|gb|EDK34348.1| ClpS [Clostridium kluyveri DSM 555] Length = 99 Score = 138 bits (349), Expect = 2e-31, Method: Composition-based stats. Identities = 35/88 (39%), Positives = 55/88 (62%) Query: 51 SSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAY 110 +++ P +Y+V++ ND+YT MEFV++VL F K A IM VH +GIG G+Y Y Sbjct: 12 KVEIKRPPMYKVIIYNDDYTTMEFVVNVLVKIFKKSDVEAVQIMYDVHRKGIGIAGIYVY 71 Query: 111 EIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 +IA K Q ++ +R +PL+ ME++ Sbjct: 72 DIAVTKTAQAISMARNSGFPLKFSMEEE 99 >gi|260462566|ref|ZP_05810773.1| ATP-dependent Clp protease adaptor protein ClpS [Mesorhizobium opportunistum WSM2075] gi|259031762|gb|EEW33031.1| ATP-dependent Clp protease adaptor protein ClpS [Mesorhizobium opportunistum WSM2075] Length = 101 Score = 138 bits (349), Expect = 2e-31, Method: Composition-based stats. Identities = 29/99 (29%), Positives = 50/99 (50%) Query: 40 FDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHH 99 + + + PKLY+V+L+ND++TP EFV+ VL+ F + A IM+ H Sbjct: 2 PEITTKPRTKVKPQTERPKLYKVILINDDFTPREFVVTVLKGEFKLSEDQAHRIMITAHQ 61 Query: 100 QGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 +G+ V+ ++AE K + + + YPL E + Sbjct: 62 RGVCVVAVFTRDVAETKATRATDAGKAKGYPLLFTTEPE 100 >gi|153003706|ref|YP_001378031.1| ATP-dependent Clp protease adaptor protein ClpS [Anaeromyxobacter sp. Fw109-5] gi|152027279|gb|ABS25047.1| ATP-dependent Clp protease adaptor protein ClpS [Anaeromyxobacter sp. Fw109-5] Length = 108 Score = 138 bits (349), Expect = 2e-31, Method: Composition-based stats. Identities = 41/108 (37%), Positives = 60/108 (55%), Gaps = 1/108 (0%) Query: 32 MNKKGIAEFDNCLD-SEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETA 90 M ++ D + + + + P L+RVLL ND+YT EFV VL F+ D E+A Sbjct: 1 MAERSRPGGDTDVVVPRTKAEKETKRPSLFRVLLHNDDYTTQEFVDWVLVTVFHHDPESA 60 Query: 91 KCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 IML VH G+G G+Y +EIAE K + M +R+ +YPL +E + Sbjct: 61 HRIMLHVHMHGVGLAGIYPFEIAETKAEKTMALAREAEYPLLVTVEPE 108 >gi|218767947|ref|YP_002342459.1| ATP-dependent Clp protease adaptor protein ClpS [Neisseria meningitidis Z2491] gi|12230806|sp|Q9JV14|CLPS_NEIMA RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|121051955|emb|CAM08263.1| hypothetical protein NMA1046 [Neisseria meningitidis Z2491] Length = 103 Score = 138 bits (349), Expect = 2e-31, Method: Composition-based stats. Identities = 40/100 (40%), Positives = 59/100 (59%), Gaps = 1/100 (1%) Query: 38 AEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKV 97 D+ D+ + + PK Y V L+ND+YT MEFV+ +L F E A +ML V Sbjct: 4 PNTDHQSDT-LLSDINTQPPKRYGVFLLNDDYTTMEFVVEILTEVFMLAQEQAVAVMLLV 62 Query: 98 HHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 HH+G G CG Y +IA+ K +QVM ++ +PL+CI+E+ Sbjct: 63 HHEGKGLCGTYTRDIAQTKQHQVMERAKTEGHPLKCIVEE 102 >gi|57237989|ref|YP_179238.1| hypothetical protein CJE1250 [Campylobacter jejuni RM1221] gi|86150412|ref|ZP_01068638.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni CF93-6] gi|88596781|ref|ZP_01100018.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni 84-25] gi|218562721|ref|YP_002344500.1| ATP-dependent Clp protease adaptor protein [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|12230833|sp|Q9PNI7|CLPS_CAMJE RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|67460170|sp|Q5HTZ7|CLPS_CAMJR RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|57166793|gb|AAW35572.1| conserved hypothetical protein [Campylobacter jejuni RM1221] gi|85839237|gb|EAQ56500.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni CF93-6] gi|88191622|gb|EAQ95594.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni 84-25] gi|112360427|emb|CAL35224.1| ATP-dependent Clp protease adaptor protein [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|284926336|gb|ADC28688.1| ATP-dependent Clp protease adaptor protein [Campylobacter jejuni subsp. jejuni IA3902] gi|315058548|gb|ADT72877.1| ATP-dependent Clp protease adaptor protein ClpS [Campylobacter jejuni subsp. jejuni S3] Length = 96 Score = 138 bits (349), Expect = 2e-31, Method: Composition-based stats. Identities = 37/94 (39%), Positives = 62/94 (65%) Query: 45 DSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGE 104 ++ +K+ PK+Y+V+L+ND+ T M+FVI +L N F+++ E A ML++HH G G Sbjct: 3 KTQTLEQTKLSEPKMYKVILLNDDVTTMDFVIEILMNIFHQNLEKASQTMLEIHHNGSGI 62 Query: 105 CGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 CG+Y EIA K +VM+ ++ +PLQ +E++ Sbjct: 63 CGIYTQEIALSKQKKVMDAAKLANFPLQAKVEEE 96 >gi|116253218|ref|YP_769056.1| ATP-dependent Clp protease adaptor [Rhizobium leguminosarum bv. viciae 3841] gi|115257866|emb|CAK08964.1| putative ATP-dependent CLP protease adaptor protein [Rhizobium leguminosarum bv. viciae 3841] Length = 103 Score = 138 bits (349), Expect = 2e-31, Method: Composition-based stats. Identities = 33/102 (32%), Positives = 55/102 (53%) Query: 37 IAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLK 96 +++ D L + + K+ PKLY+V+LVND+YTP E VI +L+ F+ ET +M+ Sbjct: 1 MSDNDIALKPKAKVKLKLDKPKLYKVILVNDDYTPRELVIMILKAVFHMSEETGYRVMMT 60 Query: 97 VHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 H G V +IAE K + ++ ++ +PL E + Sbjct: 61 AHKLGSCVVVVCVRDIAETKAKEGIDLAKGMGFPLMFTTEPE 102 >gi|219855399|ref|YP_002472521.1| hypothetical protein CKR_2056 [Clostridium kluyveri NBRC 12016] gi|219569123|dbj|BAH07107.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 104 Score = 138 bits (348), Expect = 3e-31, Method: Composition-based stats. Identities = 37/103 (35%), Positives = 59/103 (57%) Query: 36 GIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIML 95 G+ E + +++ P +Y+V++ ND+YT MEFV++VL F K A IM Sbjct: 2 GLFEMPQKTILKQNSKVEIKRPPMYKVIIYNDDYTTMEFVVNVLVKIFKKSDVEAVQIMY 61 Query: 96 KVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 VH +GIG G+Y Y+IA K Q ++ +R +PL+ ME++ Sbjct: 62 DVHRKGIGIAGIYVYDIAVTKTAQAISMARNSGFPLKFSMEEE 104 >gi|205355853|ref|ZP_03222622.1| hypothetical protein Cj8421_1136 [Campylobacter jejuni subsp. jejuni CG8421] gi|205346287|gb|EDZ32921.1| hypothetical protein Cj8421_1136 [Campylobacter jejuni subsp. jejuni CG8421] Length = 96 Score = 138 bits (347), Expect = 3e-31, Method: Composition-based stats. Identities = 36/94 (38%), Positives = 62/94 (65%) Query: 45 DSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGE 104 ++ +K+ PK+Y+V+L+ND+ T M+FVI +L N F+++ E A ML++HH G G Sbjct: 3 KTQTLEQTKLSEPKMYKVILLNDDVTTMDFVIEILMNIFHQNLEKASQTMLEIHHNGSGI 62 Query: 105 CGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 CG+Y EIA K +V++ ++ +PLQ +E++ Sbjct: 63 CGIYTQEIALSKQKKVIDSAKLANFPLQAKVEEE 96 >gi|13472441|ref|NP_104008.1| ATP-dependent Clp protease adaptor [Mesorhizobium loti MAFF303099] gi|21542322|sp|Q98HS2|CLPS2_RHILO RecName: Full=ATP-dependent Clp protease adapter protein ClpS 2 gi|14023187|dbj|BAB49794.1| mll2736 [Mesorhizobium loti MAFF303099] Length = 101 Score = 138 bits (347), Expect = 3e-31, Method: Composition-based stats. Identities = 29/99 (29%), Positives = 50/99 (50%) Query: 40 FDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHH 99 + + + PKLY+V+L+ND++TP EFV+ VL+ F + A IM+ H Sbjct: 2 PEITTKPRTKVKPQTERPKLYKVILINDDFTPREFVVTVLKGEFKLSEDQAHRIMITAHR 61 Query: 100 QGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 +G+ V+ ++AE K + + + YPL E + Sbjct: 62 RGVCVVAVFTKDVAETKATRATDAGKAKGYPLLFTTEPE 100 >gi|92116383|ref|YP_576112.1| ATP-dependent Clp protease adaptor [Nitrobacter hamburgensis X14] gi|91799277|gb|ABE61652.1| ATP-dependent Clp protease adaptor protein ClpS [Nitrobacter hamburgensis X14] Length = 101 Score = 138 bits (347), Expect = 3e-31, Method: Composition-based stats. Identities = 28/99 (28%), Positives = 46/99 (46%) Query: 40 FDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHH 99 D + + P+L++V+L ND+YTP EFV+ VL F + A +M+ H Sbjct: 2 SDTAIKPRTNVEPRTERPRLHKVILHNDDYTPREFVVTVLMAEFGLTEDQAHKVMITAHR 61 Query: 100 QGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 G V+ ++AE K + + R +PL E + Sbjct: 62 LGCCVVAVFTRDVAETKATRATDAGRAMGFPLLFTTEPE 100 >gi|302339654|ref|YP_003804860.1| ATP-dependent Clp protease adaptor protein ClpS [Spirochaeta smaragdinae DSM 11293] gi|301636839|gb|ADK82266.1| ATP-dependent Clp protease adaptor protein ClpS [Spirochaeta smaragdinae DSM 11293] Length = 103 Score = 138 bits (347), Expect = 3e-31, Method: Composition-based stats. Identities = 37/101 (36%), Positives = 60/101 (59%) Query: 37 IAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLK 96 +++F E R + R P +YRV+L+ND+YT M+FV+ V++ F+ E A IM Sbjct: 1 MSDFRFGTKLEDRSQEQYREPPMYRVILLNDDYTTMDFVVKVIRQVFHHSSEEAVKIMFD 60 Query: 97 VHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 VH +G G G Y+ +IA K QV+ ++ ++PL+C +E Sbjct: 61 VHKKGKGLVGCYSQDIAVTKQRQVLVMAKSEEFPLRCEIEP 101 >gi|154148611|ref|YP_001406669.1| ATP-dependent Clp protease adaptor protein ClpS [Campylobacter hominis ATCC BAA-381] gi|153804620|gb|ABS51627.1| ATP-dependent Clp protease adaptor protein ClpS [Campylobacter hominis ATCC BAA-381] Length = 97 Score = 138 bits (347), Expect = 3e-31, Method: Composition-based stats. Identities = 37/96 (38%), Positives = 60/96 (62%) Query: 43 CLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGI 102 +E + +K+ +PK+YRV+L+ND+ T M+FV+ +L F K + A IML +H G Sbjct: 2 AFQNESQTKTKIFIPKIYRVILLNDDVTTMDFVVMILMEIFEKTRDEAINIMLHIHKNGS 61 Query: 103 GECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 G CG Y EIAE K ++V +++ +PL C +E++ Sbjct: 62 GICGSYIKEIAETKKDEVKMLAKKANFPLVCEIEEE 97 >gi|294787951|ref|ZP_06753195.1| ATP-dependent Clp protease adaptor protein ClpS [Simonsiella muelleri ATCC 29453] gi|294484244|gb|EFG31927.1| ATP-dependent Clp protease adaptor protein ClpS [Simonsiella muelleri ATCC 29453] Length = 100 Score = 138 bits (347), Expect = 3e-31, Method: Composition-based stats. Identities = 36/87 (41%), Positives = 56/87 (64%) Query: 51 SSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAY 110 +++ PK Y V L+ND+YT MEFV+ +L + F + E A +ML++HH G G CGVY Sbjct: 12 QNQIAPPKQYGVYLLNDDYTTMEFVVQILMDVFRQPEERAISVMLEIHHHGKGLCGVYTR 71 Query: 111 EIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 ++A+ K +QVM + +PL C +E+ Sbjct: 72 DMAQTKQHQVMILAADAGFPLLCTVEE 98 >gi|118591833|ref|ZP_01549228.1| ATP-dependent Clp protease adaptor protein ClpS [Stappia aggregata IAM 12614] gi|118435476|gb|EAV42122.1| ATP-dependent Clp protease adaptor protein ClpS [Stappia aggregata IAM 12614] Length = 100 Score = 138 bits (347), Expect = 3e-31, Method: Composition-based stats. Identities = 33/99 (33%), Positives = 60/99 (60%) Query: 40 FDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHH 99 + +++ +KV+ PKLY+V+L+ND+YTP EFV+ +L+ F D A+ +M+ H Sbjct: 2 SEIDFKPKLKQKTKVQRPKLYKVMLLNDDYTPREFVVLILKAEFRLDESQAEVVMMTAHQ 61 Query: 100 QGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 +G+ VY ++AE K + ++ + + YPLQ +E + Sbjct: 62 KGVCVVSVYPRDVAETKATRAIDAAVRLGYPLQFTVEPE 100 >gi|39931007|sp|Q7VFW0|CLPS_HELHP RecName: Full=ATP-dependent Clp protease adapter protein ClpS Length = 99 Score = 137 bits (346), Expect = 4e-31, Method: Composition-based stats. Identities = 40/91 (43%), Positives = 59/91 (64%) Query: 47 EVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECG 106 E + + PK+YRVLL+ND++T M+FV +L F K + A I LK+H+ G G CG Sbjct: 7 ETSLDTLLEEPKMYRVLLLNDDWTAMDFVARILMEVFDKTSDEATAITLKIHNDGKGVCG 66 Query: 107 VYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +Y Y+IAE+K+ V ++QH YPL+ I E+ Sbjct: 67 IYTYDIAELKMQIVSQMAKQHGYPLRVITEE 97 >gi|316932749|ref|YP_004107731.1| ATP-dependent Clp protease adaptor protein ClpS [Rhodopseudomonas palustris DX-1] gi|315600463|gb|ADU42998.1| ATP-dependent Clp protease adaptor protein ClpS [Rhodopseudomonas palustris DX-1] Length = 101 Score = 137 bits (346), Expect = 4e-31, Method: Composition-based stats. Identities = 34/96 (35%), Positives = 52/96 (54%) Query: 43 CLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGI 102 L + + KV PKL++V+LVND+YTP EFV+ VL+ + A +ML H +G+ Sbjct: 5 DLKPKTKAKIKVERPKLHKVILVNDDYTPREFVVSVLKAELRMTEDQAYKVMLTAHQRGV 64 Query: 103 GECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 GV+ ++AE K + + R YPL E + Sbjct: 65 CVVGVFTKDVAETKATRATDAGRAKGYPLLFTTEPE 100 >gi|115523083|ref|YP_779994.1| ATP-dependent Clp protease adaptor [Rhodopseudomonas palustris BisA53] gi|115517030|gb|ABJ05014.1| ATP-dependent Clp protease adaptor protein ClpS [Rhodopseudomonas palustris BisA53] Length = 101 Score = 137 bits (345), Expect = 5e-31, Method: Composition-based stats. Identities = 33/95 (34%), Positives = 52/95 (54%) Query: 44 LDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIG 103 + + +KV PKL++V+LVND+YTP EFV+ VL+ F + A +M+ H +G+ Sbjct: 6 VKPTTKTRTKVERPKLHKVILVNDDYTPREFVVRVLKAEFRMTEDQAHKVMITAHQRGVC 65 Query: 104 ECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 V+ +IAE K + + R YPL E + Sbjct: 66 VVAVFTRDIAETKATRATDAGRAKGYPLLFTTEPE 100 >gi|222824061|ref|YP_002575635.1| ATP-dependent Clp protease adaptor protein ClpS [Campylobacter lari RM2100] gi|222539283|gb|ACM64384.1| ATP-dependent Clp protease adaptor protein ClpS [Campylobacter lari RM2100] Length = 97 Score = 137 bits (345), Expect = 6e-31, Method: Composition-based stats. Identities = 43/96 (44%), Positives = 63/96 (65%) Query: 43 CLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGI 102 L +E+ K+ PK+++VLL+ND+ T MEFVI VL N F+ D E A IML++H+QG Sbjct: 2 SLKNEILEQQKLTEPKMFKVLLLNDDITTMEFVIEVLMNIFHHDFEKASAIMLEIHNQGS 61 Query: 103 GECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 G CG+Y EIA K QV ++ + +PLQ +E++ Sbjct: 62 GICGIYTEEIALSKKQQVDLAAKSNNFPLQTRIEEQ 97 >gi|183221238|ref|YP_001839234.1| ATP-dependent Clp protease adaptor protein Clp [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189911329|ref|YP_001962884.1| hypothetical protein LBF_1799 [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|238687770|sp|B0S9H9|CLPS_LEPBA RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|238687849|sp|B0SS68|CLPS_LEPBP RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|167776005|gb|ABZ94306.1| conserved hypothetical protein [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167779660|gb|ABZ97958.1| ATP-dependent Clp protease adaptor protein clp [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 113 Score = 136 bits (344), Expect = 7e-31, Method: Composition-based stats. Identities = 39/109 (35%), Positives = 65/109 (59%) Query: 30 SRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHET 89 S N+K +F+ L + + K++ P Y+V+L+ND+YTP EFV++VL F K + Sbjct: 2 SESNRKSYTDFNVELLEKEKQKKKLKKPDRYKVILINDDYTPQEFVVYVLAVVFRKSMDE 61 Query: 90 AKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 ++ IM + H +G CGVY+ +IA KV +V + +PLQC + ++ Sbjct: 62 SRQIMWRAHTEGSAVCGVYSLDIARTKVAEVHKLADDAGHPLQCQLAKE 110 >gi|114771314|ref|ZP_01448734.1| ATP-dependent Clp protease, adaptor protein ClpS [alpha proteobacterium HTCC2255] gi|114548239|gb|EAU51126.1| ATP-dependent Clp protease, adaptor protein ClpS [alpha proteobacterium HTCC2255] Length = 120 Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats. Identities = 37/80 (46%), Positives = 60/80 (75%) Query: 59 LYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVN 118 +Y+V+L+ND+YTPMEFV+H+L+ +F A +M+ VH +G+ GV++++IAE KV Sbjct: 41 MYKVILLNDDYTPMEFVVHILERYFGTTGSQAYELMMLVHQKGLAVVGVFSHDIAETKVM 100 Query: 119 QVMNYSRQHQYPLQCIMEQK 138 QV +++HQ+PLQC ME++ Sbjct: 101 QVTELAQKHQHPLQCTMEKE 120 >gi|283954672|ref|ZP_06372190.1| hypothetical protein C414_000240081 [Campylobacter jejuni subsp. jejuni 414] gi|283793864|gb|EFC32615.1| hypothetical protein C414_000240081 [Campylobacter jejuni subsp. jejuni 414] Length = 96 Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats. Identities = 36/94 (38%), Positives = 60/94 (63%) Query: 45 DSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGE 104 + K+ PK+Y+V+L+ND+ T M+FVI +L N F+++ E A ML++HH G G Sbjct: 3 KIQTLEQIKLSEPKMYKVILLNDDVTTMDFVIEILINIFHQNLEKANQTMLEIHHNGSGI 62 Query: 105 CGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 CG+Y EIA K +V++ ++ +PLQ +E++ Sbjct: 63 CGIYTQEIALSKQKKVIDAAKLANFPLQVKVEEE 96 >gi|93006502|ref|YP_580939.1| ATP-dependent Clp protease adaptor protein ClpS [Psychrobacter cryohalolentis K5] gi|92394180|gb|ABE75455.1| ATP-dependent Clp protease adaptor protein ClpS [Psychrobacter cryohalolentis K5] Length = 135 Score = 135 bits (341), Expect = 1e-30, Method: Composition-based stats. Identities = 40/118 (33%), Positives = 64/118 (54%), Gaps = 4/118 (3%) Query: 21 LMSFIFMADSRMNKKGIAEFDNCLDSEVRF-SSKVRVPKLYRVLLVNDNYTPMEFVIHVL 79 I M R+ + G E + ++V +V P +Y V++ NDNYTPMEFV+++L Sbjct: 17 HFPHIPM---RLAQVGEPEGETAPQADVLVAEPEVAKPPMYAVVMYNDNYTPMEFVVYIL 73 Query: 80 QNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 Q+ F ++A IML +H+ G G+Y +IAE K +V + + + YPL +E Sbjct: 74 QSEFRHSMDSAVEIMLTIHNSSKGIAGIYPKDIAETKAKKVNSLAHREGYPLLTQIEP 131 >gi|91975795|ref|YP_568454.1| ATP-dependent Clp protease adaptor [Rhodopseudomonas palustris BisB5] gi|91682251|gb|ABE38553.1| ATP-dependent Clp protease adaptor protein ClpS [Rhodopseudomonas palustris BisB5] Length = 101 Score = 135 bits (341), Expect = 2e-30, Method: Composition-based stats. Identities = 31/95 (32%), Positives = 50/95 (52%) Query: 44 LDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIG 103 + K+ PKL++V+LVND++TP EFV+ +L+ F E A +ML H +G+ Sbjct: 6 TKPSTKAKPKLERPKLHKVILVNDDFTPREFVVMILKAEFRMTEEQAYKVMLTAHQRGVC 65 Query: 104 ECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 V+ ++AE K + + R YPL E + Sbjct: 66 VVAVFTKDVAETKATRATDAGRVKGYPLLFTTEPE 100 >gi|90422655|ref|YP_531025.1| ATP-dependent Clp protease adaptor [Rhodopseudomonas palustris BisB18] gi|90104669|gb|ABD86706.1| ATP-dependent Clp protease adaptor protein ClpS [Rhodopseudomonas palustris BisB18] Length = 105 Score = 135 bits (341), Expect = 2e-30, Method: Composition-based stats. Identities = 32/96 (33%), Positives = 50/96 (52%) Query: 43 CLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGI 102 + + K PKL++V+LVND+YTP EFV+ VLQ F + A +M+ H +G+ Sbjct: 9 DVAPRTKVKPKTERPKLHKVILVNDDYTPREFVVRVLQAEFRMTEDQAHKVMITAHQRGV 68 Query: 103 GECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 V+ ++AE K + + R YPL E + Sbjct: 69 CVVAVFTKDVAETKATRATDAGRAKGYPLLFTTEPE 104 >gi|300855650|ref|YP_003780634.1| ATP-dependent protease adaptor protein ClpS [Clostridium ljungdahlii DSM 13528] gi|300435765|gb|ADK15532.1| ATP-dependent protease adaptor protein ClpS [Clostridium ljungdahlii DSM 13528] Length = 99 Score = 135 bits (341), Expect = 2e-30, Method: Composition-based stats. Identities = 36/90 (40%), Positives = 54/90 (60%) Query: 49 RFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVY 108 + K++ P +Y+V++ ND+YT MEFV+ VL F K A IM VH +GIG GVY Sbjct: 10 KPQLKIKPPSMYKVIIHNDDYTTMEFVVEVLIKIFEKSAVEATKIMYDVHRRGIGVAGVY 69 Query: 109 AYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 Y+IA K+ Q + + +PL+ ME++ Sbjct: 70 VYDIAATKIMQAVKMAESSGFPLKFSMEEE 99 >gi|218193695|gb|EEC76122.1| hypothetical protein OsI_13390 [Oryza sativa Indica Group] Length = 3986 Score = 135 bits (340), Expect = 2e-30, Method: Composition-based stats. Identities = 42/121 (34%), Positives = 68/121 (56%), Gaps = 9/121 (7%) Query: 18 ILALMSFIFMADSRMNKKGIAEFDNCLDSEVRFSS-KVRVPKLYRVLLVNDNYTPMEFVI 76 ++ M+ + + G+ D+ + + + + P++Y+V+++ND+YTPMEFVI Sbjct: 3565 VMVRMATKPPSMTPTPPTGVPSRDDGGSVVLERRTQRTQPPQMYQVVMLNDDYTPMEFVI 3624 Query: 77 HVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNY--------SRQHQ 128 VLQ FF KD E A IMLK+H G G CGVY+ ++A KV Q + +RQ + Sbjct: 3625 VVLQEFFGKDREAATQIMLKIHLDGKGVCGVYSRDVAATKVEQELEVSLHMAFVEARQQR 3684 Query: 129 Y 129 + Sbjct: 3685 H 3685 >gi|319781851|ref|YP_004141327.1| ATP-dependent Clp protease adaptor protein ClpS [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317167739|gb|ADV11277.1| ATP-dependent Clp protease adaptor protein ClpS [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 101 Score = 135 bits (340), Expect = 2e-30, Method: Composition-based stats. Identities = 29/99 (29%), Positives = 51/99 (51%) Query: 40 FDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHH 99 + + +V PKLY+V+L+ND++TP EFV+ VL+ F + A +M+ H Sbjct: 2 PEITTKPRTQIKPQVERPKLYKVILINDDFTPREFVVTVLKGEFKLSEDQAHRVMITAHR 61 Query: 100 QGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 +G+ V+ ++AE K + + + YPL E + Sbjct: 62 RGVCVVAVFTKDVAETKATRATDAGKAKGYPLMFTTEPE 100 >gi|15895099|ref|NP_348448.1| hypothetical protein CA_C1823 [Clostridium acetobutylicum ATCC 824] gi|21542321|sp|Q97I31|CLPS_CLOAB RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|15024798|gb|AAK79788.1|AE007691_6 Uncharacterized conserved protein [Clostridium acetobutylicum ATCC 824] gi|325509237|gb|ADZ20873.1| Conserved hypothetical protein [Clostridium acetobutylicum EA 2018] Length = 101 Score = 135 bits (340), Expect = 2e-30, Method: Composition-based stats. Identities = 40/96 (41%), Positives = 56/96 (58%) Query: 42 NCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQG 101 D ++ K+ PK+Y+V+L ND+YT MEFVI +L N F K A I VH G Sbjct: 5 TSFDENIKQKHKIEKPKMYKVILHNDDYTTMEFVIEILINVFNKVPANAVKITFDVHKNG 64 Query: 102 IGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 IG GVY Y+IA K+N+V + ++ YPL+ M + Sbjct: 65 IGIAGVYPYDIAATKINEVKKLAYKNGYPLKLTMGE 100 >gi|57167994|ref|ZP_00367133.1| Uncharacterized ACR, COG2127 [Campylobacter coli RM2228] gi|305431855|ref|ZP_07401022.1| ATP-dependent Clp protease adaptor protein ClpS [Campylobacter coli JV20] gi|57020368|gb|EAL57037.1| Uncharacterized ACR, COG2127 [Campylobacter coli RM2228] gi|304444939|gb|EFM37585.1| ATP-dependent Clp protease adaptor protein ClpS [Campylobacter coli JV20] Length = 96 Score = 135 bits (340), Expect = 2e-30, Method: Composition-based stats. Identities = 42/94 (44%), Positives = 62/94 (65%) Query: 45 DSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGE 104 +V SK++ PK+++V+L+ND+ T M+FVI VL N FY D ETA IML+VH G G Sbjct: 3 KLKVLEKSKLKEPKMFKVILLNDDVTTMDFVIEVLINIFYHDFETANKIMLEVHLNGSGI 62 Query: 105 CGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 CG+Y EIA K +V + ++ +PLQ +E++ Sbjct: 63 CGIYTQEIALSKQKKVSDAAKLANFPLQTRVEEE 96 >gi|218891218|ref|YP_002440084.1| hypothetical protein PLES_24841 [Pseudomonas aeruginosa LESB58] gi|254235607|ref|ZP_04928930.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719] gi|254241054|ref|ZP_04934376.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192] gi|308154504|ref|NP_251311.3| hypothetical protein PA2621 [Pseudomonas aeruginosa PAO1] gi|313107658|ref|ZP_07793841.1| ATP-dependent Clp protease adaptor protein clpS [Pseudomonas aeruginosa 39016] gi|9948687|gb|AAG06009.1|AE004690_9 conserved hypothetical protein [Pseudomonas aeruginosa PAO1] gi|126167538|gb|EAZ53049.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719] gi|126194432|gb|EAZ58495.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192] gi|218771443|emb|CAW27210.1| conserved hypothetical protein [Pseudomonas aeruginosa LESB58] gi|310880343|gb|EFQ38937.1| ATP-dependent Clp protease adaptor protein clpS [Pseudomonas aeruginosa 39016] Length = 78 Score = 135 bits (340), Expect = 2e-30, Method: Composition-based stats. Identities = 37/76 (48%), Positives = 52/76 (68%) Query: 62 VLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVM 121 ++L ND+YTPM+FV+ VL+ FF D E A IML VH QG CG++ ++AE K QV Sbjct: 1 MVLFNDDYTPMDFVVEVLEVFFNMDREKATKIMLTVHTQGKAVCGLFTRDVAETKAMQVN 60 Query: 122 NYSRQHQYPLQCIMEQ 137 Y+R+ Q+PL C +E+ Sbjct: 61 QYARESQHPLLCEIEK 76 >gi|242309928|ref|ZP_04809083.1| ATP-dependent Clp protease adapter protein clpS [Helicobacter pullorum MIT 98-5489] gi|239523225|gb|EEQ63091.1| ATP-dependent Clp protease adapter protein clpS [Helicobacter pullorum MIT 98-5489] Length = 101 Score = 134 bits (339), Expect = 3e-30, Method: Composition-based stats. Identities = 38/81 (46%), Positives = 57/81 (70%) Query: 57 PKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMK 116 P Y+V+L+ND+YT +FVI VLQ F+KD E + +ML++HH G G CG+Y Y+IAE K Sbjct: 20 PIRYKVILLNDDYTTQDFVIEVLQKVFHKDFEASLNLMLQIHHNGRGMCGIYPYDIAETK 79 Query: 117 VNQVMNYSRQHQYPLQCIMEQ 137 +V ++ Q+PL+ I+E+ Sbjct: 80 ALEVRKMAKAKQFPLRAILEK 100 >gi|125973731|ref|YP_001037641.1| ATP-dependent Clp protease adaptor protein ClpS [Clostridium thermocellum ATCC 27405] gi|256005533|ref|ZP_05430494.1| ATP-dependent Clp protease adaptor protein ClpS [Clostridium thermocellum DSM 2360] gi|281417888|ref|ZP_06248908.1| ATP-dependent Clp protease adaptor protein ClpS [Clostridium thermocellum JW20] gi|229889819|sp|A3DER9|CLPS_CLOTH RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|125713956|gb|ABN52448.1| ATP-dependent Clp protease adaptor protein ClpS [Clostridium thermocellum ATCC 27405] gi|255990513|gb|EEU00634.1| ATP-dependent Clp protease adaptor protein ClpS [Clostridium thermocellum DSM 2360] gi|281409290|gb|EFB39548.1| ATP-dependent Clp protease adaptor protein ClpS [Clostridium thermocellum JW20] gi|316940075|gb|ADU74109.1| ATP-dependent Clp protease adaptor protein ClpS [Clostridium thermocellum DSM 1313] Length = 99 Score = 134 bits (339), Expect = 3e-30, Method: Composition-based stats. Identities = 35/93 (37%), Positives = 56/93 (60%) Query: 46 SEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGEC 105 + + + PK+Y+V+L+ND+YT M+FV+ +L F+K A IML VH +G G Sbjct: 7 VKKETNVDFKKPKMYKVILLNDDYTTMDFVVEILITVFHKTAADATRIMLDVHRKGKGVV 66 Query: 106 GVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 GVY Y+IA K+ V + + ++PL +ME + Sbjct: 67 GVYTYDIARSKIALVEKMAAEREFPLAAVMEPE 99 >gi|297180171|gb|ADI16393.1| uncharacterized conserved protein [uncultured bacterium HF130_12L15] Length = 101 Score = 134 bits (339), Expect = 3e-30, Method: Composition-based stats. Identities = 29/99 (29%), Positives = 53/99 (53%) Query: 40 FDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHH 99 D S + K+ P+L++V+L ND++TP EFV+ VL+ F + + A+ +M+ H Sbjct: 2 NDVDTKSRTKVKPKIERPRLHKVILFNDDFTPREFVVMVLKAEFGMNADQAQQVMITAHR 61 Query: 100 QGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 +G V+ ++AE K + + R+ +PL E + Sbjct: 62 RGACVVAVFTKDVAETKATRATDAGRKMGFPLLFGTEPE 100 >gi|311694972|gb|ADP97845.1| ATP-dependent Clp protease adaptor protein ClpS [marine bacterium HP15] Length = 78 Score = 134 bits (338), Expect = 4e-30, Method: Composition-based stats. Identities = 37/76 (48%), Positives = 51/76 (67%) Query: 62 VLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVM 121 ++L+ND+YTPM+FV+ VL FF + E A +ML VH QG CGVY +IAE K QV Sbjct: 1 MVLLNDDYTPMDFVVDVLMKFFGMNEEKATQVMLLVHTQGKAVCGVYTRDIAETKAAQVN 60 Query: 122 NYSRQHQYPLQCIMEQ 137 YS + ++PL C +E+ Sbjct: 61 QYSSECEHPLLCEIER 76 >gi|32267064|ref|NP_861096.1| hypothetical protein HH1565 [Helicobacter hepaticus ATCC 51449] gi|32263116|gb|AAP78162.1| conserved hypothetical protein [Helicobacter hepaticus ATCC 51449] Length = 87 Score = 134 bits (338), Expect = 4e-30, Method: Composition-based stats. Identities = 39/84 (46%), Positives = 57/84 (67%) Query: 54 VRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIA 113 + PK+YRVLL+ND++T M+FV +L F K + A I LK+H+ G G CG+Y Y+IA Sbjct: 2 LEEPKMYRVLLLNDDWTAMDFVARILMEVFDKTSDEATAITLKIHNDGKGVCGIYTYDIA 61 Query: 114 EMKVNQVMNYSRQHQYPLQCIMEQ 137 E+K+ V ++QH YPL+ I E+ Sbjct: 62 ELKMQIVSQMAKQHGYPLRVITEE 85 >gi|146329659|ref|YP_001209565.1| ATP-dependent Clp protease adaptor protein ClpS [Dichelobacter nodosus VCS1703A] gi|146233129|gb|ABQ14107.1| ATP-dependent Clp protease adaptor protein ClpS [Dichelobacter nodosus VCS1703A] Length = 104 Score = 134 bits (338), Expect = 4e-30, Method: Composition-based stats. Identities = 39/103 (37%), Positives = 61/103 (59%) Query: 36 GIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIML 95 + ++ L + S V P L+ V+L ND+YT M+FVI V+ FFY+ E A+ +ML Sbjct: 2 STSSQNDLLLAPSAQKSDVAQPDLFEVVLHNDDYTTMDFVIEVICRFFYQTAEVAEKLML 61 Query: 96 KVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 KVH +G G++ +IAE K QV+ Y+R+ +PL C + + Sbjct: 62 KVHFEGSAVVGIFPRDIAETKARQVIAYAREKGHPLMCSIRPQ 104 >gi|57242270|ref|ZP_00370209.1| Uncharacterized ACR, COG2127 [Campylobacter upsaliensis RM3195] gi|57016950|gb|EAL53732.1| Uncharacterized ACR, COG2127 [Campylobacter upsaliensis RM3195] Length = 96 Score = 134 bits (337), Expect = 4e-30, Method: Composition-based stats. Identities = 39/94 (41%), Positives = 60/94 (63%) Query: 45 DSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGE 104 E ++ PK+Y+V+L+ND+ T M+FVI VL + F+ E A IMLK+H +G G Sbjct: 3 KLESLQKEHLQEPKMYKVVLLNDDVTTMDFVIEVLMHVFFHSFEKANEIMLKIHCEGSGV 62 Query: 105 CGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 CG+Y EIA K +V N +++ Q+PLQ +E++ Sbjct: 63 CGIYTQEIALSKQKKVQNMAKEAQFPLQSRVEEE 96 >gi|71066054|ref|YP_264781.1| ATP-dependent Clp protease adapter protein [Psychrobacter arcticus 273-4] gi|71039039|gb|AAZ19347.1| probable ATP-dependent Clp protease adapter protein [Psychrobacter arcticus 273-4] Length = 138 Score = 133 bits (336), Expect = 6e-30, Method: Composition-based stats. Identities = 37/108 (34%), Positives = 62/108 (57%), Gaps = 1/108 (0%) Query: 31 RMNKKGIAEFDNCLDSEVRF-SSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHET 89 R+ + G + + ++V +V P +Y V++ NDNYTPMEFV+++LQ+ F ++ Sbjct: 27 RLAQVGEPDGETTPQADVLVAEPEVAKPPMYAVVMYNDNYTPMEFVVYILQSEFRHSMDS 86 Query: 90 AKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 A IML +H+ G G+Y +IAE K +V + + + YPL +E Sbjct: 87 AVEIMLTIHNSSKGIAGIYPKDIAETKAKKVNSLAHREGYPLLTQIEP 134 >gi|222086600|ref|YP_002545134.1| hypothetical protein Arad_3194 [Agrobacterium radiobacter K84] gi|221724048|gb|ACM27204.1| conserved hypothetical protein [Agrobacterium radiobacter K84] Length = 103 Score = 133 bits (336), Expect = 6e-30, Method: Composition-based stats. Identities = 36/102 (35%), Positives = 55/102 (53%) Query: 37 IAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLK 96 +++ D L + + KV PKLY+++LVND+YTP EFVI VLQ F E +M+ Sbjct: 1 MSDNDVVLKPKTKTKPKVERPKLYKIILVNDDYTPREFVIMVLQAVFRMSEEAGYRVMMT 60 Query: 97 VHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 H G V A +IAE K + ++ ++ +PL E + Sbjct: 61 AHKLGSCVVMVCARDIAETKAQEAIDLAKSADFPLMFTTEPE 102 >gi|330814167|ref|YP_004358406.1| ATP-dependent Clp protease adaptor protein ClpS [Candidatus Pelagibacter sp. IMCC9063] gi|327487262|gb|AEA81667.1| ATP-dependent Clp protease adaptor protein ClpS [Candidatus Pelagibacter sp. IMCC9063] Length = 101 Score = 133 bits (336), Expect = 7e-30, Method: Composition-based stats. Identities = 40/88 (45%), Positives = 57/88 (64%) Query: 49 RFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVY 108 + S+K P Y V+L+ND++T MEFVI VL FF + AK +MLK+H G CG Y Sbjct: 12 KLSTKTTKPPYYNVILLNDDFTTMEFVIQVLIIFFKMTNNKAKNVMLKIHEDGSAICGTY 71 Query: 109 AYEIAEMKVNQVMNYSRQHQYPLQCIME 136 +IA+ + V NY++Q+ +PL+CIME Sbjct: 72 TKDIAKTLTSLVNNYAKQNLFPLKCIME 99 >gi|315638592|ref|ZP_07893766.1| ATP-dependent Clp protease adaptor protein ClpS [Campylobacter upsaliensis JV21] gi|315481216|gb|EFU71846.1| ATP-dependent Clp protease adaptor protein ClpS [Campylobacter upsaliensis JV21] Length = 96 Score = 133 bits (335), Expect = 7e-30, Method: Composition-based stats. Identities = 39/94 (41%), Positives = 59/94 (62%) Query: 45 DSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGE 104 E ++ PK+Y+V+L+ND+ T M+FVI VL F+ E A IMLK+H +G G Sbjct: 3 KLESLQKEHLQEPKMYKVVLLNDDVTTMDFVIEVLMYVFFHSFEKANEIMLKIHCEGSGV 62 Query: 105 CGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 CG+Y EIA K +V N +++ Q+PLQ +E++ Sbjct: 63 CGIYTQEIALSKQKKVQNMAKEAQFPLQSRVEEE 96 >gi|254519310|ref|ZP_05131366.1| ATP-dependent Clp protease adaptor protein ClpS [Clostridium sp. 7_2_43FAA] gi|226913059|gb|EEH98260.1| ATP-dependent Clp protease adaptor protein ClpS [Clostridium sp. 7_2_43FAA] Length = 99 Score = 133 bits (335), Expect = 8e-30, Method: Composition-based stats. Identities = 30/98 (30%), Positives = 57/98 (58%) Query: 41 DNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQ 100 + + + K++ PK + V++ ND++T MEFV+ +L + F + E A IM++VH Sbjct: 2 ETNANILEKIDLKIKKPKKFIVIMHNDDFTTMEFVVAILSDIFNRSIEEANKIMMEVHKN 61 Query: 101 GIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 G G G+Y Y+IA K + M +++ +P + +E++ Sbjct: 62 GKGVAGIYPYDIAISKATKAMTLAKEEGFPFKLTVEEE 99 >gi|15966109|ref|NP_386462.1| ATP-dependent Clp protease adaptor [Sinorhizobium meliloti 1021] gi|21542319|sp|Q92N66|CLPS2_RHIME RecName: Full=ATP-dependent Clp protease adapter protein ClpS 2 gi|15075379|emb|CAC46935.1| Putative ATP-dependent Clp protease adapter protein clpS 2 [Sinorhizobium meliloti 1021] Length = 101 Score = 133 bits (335), Expect = 9e-30, Method: Composition-based stats. Identities = 34/99 (34%), Positives = 53/99 (53%) Query: 40 FDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHH 99 DN + ++ K+ PKLY+VLLVND++TP EFV+ VL+ F E +M+ H Sbjct: 2 SDNDVAAKRLTKPKLERPKLYKVLLVNDDFTPREFVVMVLKAVFRMSEEAGYRVMMTAHK 61 Query: 100 QGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 GI V A ++AE K + + ++ +PL E + Sbjct: 62 MGISVVVVCAKDVAETKAKEATDLGKEAGFPLLFTAEPE 100 >gi|49082482|gb|AAT50641.1| PA2621 [synthetic construct] Length = 79 Score = 133 bits (334), Expect = 1e-29, Method: Composition-based stats. Identities = 36/76 (47%), Positives = 51/76 (67%) Query: 62 VLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVM 121 ++L ND+YTPM+FV+ VL+ FF D E A ML VH QG CG++ ++AE K QV Sbjct: 1 MVLFNDDYTPMDFVVEVLEVFFNMDREKATKTMLTVHTQGKAVCGLFTRDVAETKAMQVN 60 Query: 122 NYSRQHQYPLQCIMEQ 137 Y+R+ Q+PL C +E+ Sbjct: 61 QYARESQHPLLCEIEK 76 >gi|264678276|ref|YP_003278183.1| ATP-dependent Clp protease adaptor protein ClpS [Comamonas testosteroni CNB-2] gi|299533529|ref|ZP_07046906.1| ATP-dependent Clp protease adaptor protein ClpS [Comamonas testosteroni S44] gi|262208789|gb|ACY32887.1| ATP-dependent Clp protease adaptor protein ClpS [Comamonas testosteroni CNB-2] gi|298718487|gb|EFI59467.1| ATP-dependent Clp protease adaptor protein ClpS [Comamonas testosteroni S44] Length = 95 Score = 133 bits (334), Expect = 1e-29, Method: Composition-based stats. Identities = 39/79 (49%), Positives = 56/79 (70%) Query: 59 LYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVN 118 +Y+V+++ND++TPMEFVI VLQ F KD E+A IMLK+H G G CGVY+ ++A KV Sbjct: 15 MYQVVMLNDDFTPMEFVIAVLQELFGKDRESATQIMLKIHLDGRGVCGVYSQDVAATKVE 74 Query: 119 QVMNYSRQHQYPLQCIMEQ 137 QV+ +++ +PLQ E Sbjct: 75 QVLQAAQKAGHPLQATFEP 93 >gi|254491965|ref|ZP_05105143.1| ATP-dependent Clp protease adaptor protein ClpS [Methylophaga thiooxidans DMS010] gi|224462780|gb|EEF79051.1| ATP-dependent Clp protease adaptor protein ClpS [Methylophaga thiooxydans DMS010] Length = 75 Score = 133 bits (334), Expect = 1e-29, Method: Composition-based stats. Identities = 39/75 (52%), Positives = 55/75 (73%) Query: 64 LVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNY 123 ++ND+YTPM+FV+ VL+N F E A ML+VH +G CG++ YEIAE KV QV +Y Sbjct: 1 MLNDDYTPMDFVVEVLENLFGMGREKATQTMLQVHTEGSALCGIFTYEIAEAKVEQVNSY 60 Query: 124 SRQHQYPLQCIMEQK 138 S++H +PLQC ME++ Sbjct: 61 SQRHGHPLQCTMEEE 75 >gi|307305663|ref|ZP_07585410.1| ATP-dependent Clp protease adaptor protein ClpS [Sinorhizobium meliloti BL225C] gi|307317666|ref|ZP_07597105.1| ATP-dependent Clp protease adaptor protein ClpS [Sinorhizobium meliloti AK83] gi|306896824|gb|EFN27571.1| ATP-dependent Clp protease adaptor protein ClpS [Sinorhizobium meliloti AK83] gi|306902366|gb|EFN32962.1| ATP-dependent Clp protease adaptor protein ClpS [Sinorhizobium meliloti BL225C] Length = 101 Score = 133 bits (334), Expect = 1e-29, Method: Composition-based stats. Identities = 33/99 (33%), Positives = 52/99 (52%) Query: 40 FDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHH 99 DN + ++ K+ PKLY+VLLVND++TP EFV+ VL+ F E +M+ H Sbjct: 2 SDNDVAAKRLTKPKLERPKLYKVLLVNDDFTPREFVVMVLKAVFRMSEEAGYRVMMTAHK 61 Query: 100 QGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 G V A ++AE K + + ++ +PL E + Sbjct: 62 MGTSVVVVCAKDVAETKAKEATDLGKEAGFPLLFTAEPE 100 >gi|313143016|ref|ZP_07805209.1| ATP-dependent Clp protease adapter protein clpS [Helicobacter cinaedi CCUG 18818] gi|313128047|gb|EFR45664.1| ATP-dependent Clp protease adapter protein clpS [Helicobacter cinaedi CCUG 18818] Length = 87 Score = 132 bits (333), Expect = 1e-29, Method: Composition-based stats. Identities = 40/84 (47%), Positives = 57/84 (67%) Query: 54 VRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIA 113 + PKLYRVLL+ND++T M FV H+L F K + A+ I LKVH++G G CG+Y Y+IA Sbjct: 2 LEEPKLYRVLLLNDDWTAMNFVTHILMEVFDKTSQEARAITLKVHNEGKGVCGIYPYDIA 61 Query: 114 EMKVNQVMNYSRQHQYPLQCIMEQ 137 E+K V +++ YPL+ I E+ Sbjct: 62 ELKTQLVSQKAKEQGYPLRVITEE 85 >gi|326793263|ref|YP_004311084.1| ATP-dependent Clp protease adaptor protein ClpS [Clostridium lentocellum DSM 5427] gi|326544027|gb|ADZ85886.1| ATP-dependent Clp protease adaptor protein ClpS [Clostridium lentocellum DSM 5427] Length = 99 Score = 132 bits (332), Expect = 2e-29, Method: Composition-based stats. Identities = 35/93 (37%), Positives = 58/93 (62%) Query: 45 DSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGE 104 D + +KV++PK Y+V++ ND+YT MEFV+ VL F K A+ IM+ VH G G Sbjct: 6 DLNQKIKAKVKLPKQYQVIMFNDDYTTMEFVVEVLTQIFNKSAAEAEKIMMDVHKAGHGV 65 Query: 105 CGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 G+Y+Y+IA K M+++++ +P + +E+ Sbjct: 66 AGIYSYDIAMTKAGTAMSWAKEEGFPFKLSVEE 98 >gi|326794631|ref|YP_004312451.1| ATP-dependent Clp protease adapter protein clpS [Marinomonas mediterranea MMB-1] gi|326545395|gb|ADZ90615.1| ATP-dependent Clp protease adapter protein clpS [Marinomonas mediterranea MMB-1] Length = 117 Score = 132 bits (332), Expect = 2e-29, Method: Composition-based stats. Identities = 42/107 (39%), Positives = 70/107 (65%) Query: 31 RMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETA 90 ++N + ++ + + ++ P +Y+V+L ND+YTPM+FV+ VLQ FF D E A Sbjct: 8 QLNLEDEDQYGHSSVATAPDDVELSPPSMYQVVLFNDDYTPMDFVVFVLQRFFNMDGEKA 67 Query: 91 KCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 + +ML+VH +G G CGVY + IAE KV QV + +Q+++PL C +++ Sbjct: 68 EQVMLEVHMKGKGVCGVYPFGIAETKVAQVQQFVQQNEHPLMCDLQK 114 >gi|42527626|ref|NP_972724.1| hypothetical protein TDE2123 [Treponema denticola ATCC 35405] gi|67460342|sp|Q73KU4|CLPS_TREDE RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|41818454|gb|AAS12643.1| conserved hypothetical protein [Treponema denticola ATCC 35405] gi|325474421|gb|EGC77608.1| ATP-dependent Clp protease adaptor protein ClpS [Treponema denticola F0402] Length = 101 Score = 132 bits (332), Expect = 2e-29, Method: Composition-based stats. Identities = 38/90 (42%), Positives = 57/90 (63%) Query: 48 VRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGV 107 S K P+ YRV+L+ND++TPM+FV+ VL + F K E A+ +M KVH G G+ Sbjct: 11 TIISEKFIEPENYRVILLNDDFTPMDFVVAVLISIFNKSQEEAETLMFKVHKTGQASVGI 70 Query: 108 YAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 Y Y+IA K QV+ ++ + +PLQC +E+ Sbjct: 71 YVYDIATTKCFQVLTAAKNNNFPLQCKVEK 100 >gi|198275274|ref|ZP_03207805.1| hypothetical protein BACPLE_01433 [Bacteroides plebeius DSM 17135] gi|198271857|gb|EDY96127.1| hypothetical protein BACPLE_01433 [Bacteroides plebeius DSM 17135] Length = 102 Score = 132 bits (332), Expect = 2e-29, Method: Composition-based stats. Identities = 33/92 (35%), Positives = 58/92 (63%) Query: 47 EVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECG 106 + + ++ PK Y+V+L ND++T M+FV+ VL+ F+K E A+ +MLKVH Q G Sbjct: 9 KEKKRVELHEPKHYKVILHNDDFTTMDFVVKVLKIVFFKSQEEAEALMLKVHQQQSATAG 68 Query: 107 VYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 VY+Y++A+ K + +R+ +PL+ +E + Sbjct: 69 VYSYDVAQSKAQKATQMAREEGFPLRLTVEPE 100 >gi|294672831|ref|YP_003573447.1| ATP-dependent Clp protease adaptor protein ClpS [Prevotella ruminicola 23] gi|294472147|gb|ADE81536.1| ATP-dependent Clp protease adaptor protein ClpS [Prevotella ruminicola 23] Length = 101 Score = 132 bits (332), Expect = 2e-29, Method: Composition-based stats. Identities = 32/93 (34%), Positives = 58/93 (62%) Query: 46 SEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGEC 105 ++ R + +R P+ Y+V + ND++T MEFV+ +L F+K A+ +ML+VHH Sbjct: 8 TKERQHTNLREPRRYKVTIYNDDFTTMEFVVKILTQVFFKSETEAEALMLQVHHSDKAVV 67 Query: 106 GVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 G+Y+Y++A KV + N +R+ +PL+ +E + Sbjct: 68 GIYSYDVATSKVRKATNMAREEGFPLRLTVEPE 100 >gi|84501067|ref|ZP_00999302.1| ATP-dependent Clp protease adaptor protein ClpS [Oceanicola batsensis HTCC2597] gi|84391134|gb|EAQ03552.1| ATP-dependent Clp protease adaptor protein ClpS [Oceanicola batsensis HTCC2597] Length = 101 Score = 131 bits (331), Expect = 2e-29, Method: Composition-based stats. Identities = 32/98 (32%), Positives = 51/98 (52%) Query: 41 DNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQ 100 D + V +++ PKLY+V+L+ND++TP FV+ VLQ F A+ +M+ H + Sbjct: 3 DRAPEGTVETATRSERPKLYKVILLNDDFTPRRFVVKVLQGVFRMTEGEAEAVMMTAHRR 62 Query: 101 GIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 G V+ EIAE K + R +PL E++ Sbjct: 63 GACVVAVFTREIAEQKAREATELGRHAGFPLTFTTERE 100 >gi|303242598|ref|ZP_07329074.1| ATP-dependent Clp protease adaptor protein ClpS [Acetivibrio cellulolyticus CD2] gi|302589855|gb|EFL59627.1| ATP-dependent Clp protease adaptor protein ClpS [Acetivibrio cellulolyticus CD2] Length = 99 Score = 131 bits (330), Expect = 3e-29, Method: Composition-based stats. Identities = 38/85 (44%), Positives = 54/85 (63%) Query: 53 KVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEI 112 + + PK+Y+V+L+ND+YT MEFVI VL F+K+ A IML VH +G G G Y Y+I Sbjct: 14 EFKKPKMYKVILLNDDYTTMEFVIEVLIAVFHKNPTDATQIMLDVHEKGKGIVGAYTYDI 73 Query: 113 AEMKVNQVMNYSRQHQYPLQCIMEQ 137 A K+ QV + + +PL +ME Sbjct: 74 ACTKIAQVEEMAIKRDFPLVTVMEP 98 >gi|150397465|ref|YP_001327932.1| ATP-dependent Clp protease adaptor [Sinorhizobium medicae WSM419] gi|150028980|gb|ABR61097.1| ATP-dependent Clp protease adaptor protein ClpS [Sinorhizobium medicae WSM419] Length = 101 Score = 131 bits (330), Expect = 3e-29, Method: Composition-based stats. Identities = 33/102 (32%), Positives = 50/102 (49%), Gaps = 2/102 (1%) Query: 37 IAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLK 96 ++E D R + PKLY+VLLVND+YTP EFV+ VL+ F E +M+ Sbjct: 1 MSENDVAAKRLTRLKPE--RPKLYKVLLVNDDYTPREFVVMVLKAIFRMSEEAGYRVMMT 58 Query: 97 VHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 H G V ++AE K + + ++ +PL E + Sbjct: 59 AHKLGTSVVVVCEKDVAETKAKEATDLGKEAGFPLLFTAEPE 100 >gi|302671436|ref|YP_003831396.1| ATP-dependent Clp protease adaptor protein ClpS [Butyrivibrio proteoclasticus B316] gi|302395909|gb|ADL34814.1| ATP-dependent Clp protease adaptor protein ClpS [Butyrivibrio proteoclasticus B316] Length = 99 Score = 130 bits (328), Expect = 5e-29, Method: Composition-based stats. Identities = 30/96 (31%), Positives = 59/96 (61%) Query: 42 NCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQG 101 ++ + S+++ P+ Y V+++ND++T M+FV+ +L + F+KD +A+ IML VH G Sbjct: 3 TGSQTKEKTGSRIKEPRQYNVIMLNDDFTTMDFVVSILVDIFHKDPVSAEAIMLGVHKSG 62 Query: 102 IGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 G Y Y+IA +VN + +++ +P + +E+ Sbjct: 63 QAVVGKYPYDIAVTRVNNALARAKKEGFPFRMTVEE 98 >gi|83633194|gb|ABC29161.1| uncharacterized conserved protein [Hahella chejuensis KCTC 2396] Length = 76 Score = 130 bits (328), Expect = 5e-29, Method: Composition-based stats. Identities = 34/74 (45%), Positives = 47/74 (63%) Query: 64 LVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNY 123 ++ND+YTPM+FV+ VL FF A +ML VH QG CGV+ +IAE K QV Y Sbjct: 1 MLNDDYTPMDFVVEVLIRFFNMSEPKATQVMLAVHTQGRAVCGVFTRDIAESKAAQVNQY 60 Query: 124 SRQHQYPLQCIMEQ 137 S + ++PL C +E+ Sbjct: 61 SSECEHPLLCEIER 74 >gi|325293590|ref|YP_004279454.1| ATP-dependent Clp protease adaptor [Agrobacterium sp. H13-3] gi|325061443|gb|ADY65134.1| ATP-dependent Clp protease adaptor [Agrobacterium sp. H13-3] Length = 104 Score = 130 bits (328), Expect = 6e-29, Method: Composition-based stats. Identities = 30/102 (29%), Positives = 53/102 (51%) Query: 37 IAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLK 96 +++ L + + K+ PKLY+V+L+ND+YTP +FV VL+ F+ +T +M+ Sbjct: 2 MSDSPVDLKPKPKVKPKLERPKLYKVILLNDDYTPRDFVTLVLKVVFHMGEDTGHRVMMT 61 Query: 97 VHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 H G V +IAE K + + ++ +PL E + Sbjct: 62 AHRFGSAVVVVCERDIAETKAKEANDLGKEAGFPLMFTTEPE 103 >gi|268607890|ref|ZP_06141621.1| ATP-dependent Clp protease adaptor protein ClpS [Ruminococcus flavefaciens FD-1] Length = 99 Score = 129 bits (326), Expect = 9e-29, Method: Composition-based stats. Identities = 34/92 (36%), Positives = 57/92 (61%) Query: 46 SEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGEC 105 + R S V+ P+LY V+++ND++T MEFV+ VL F+KD TA+ IM+ VH G Sbjct: 7 VKERSDSMVKEPRLYSVIMINDDFTTMEFVVGVLVEIFHKDEITAQAIMMHVHKNGQAVV 66 Query: 106 GVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 G Y Y+IA +V + + +++ +P + +E+ Sbjct: 67 GKYPYDIASTRVKKALERAKEEGFPFRMTIEE 98 >gi|288929195|ref|ZP_06423040.1| ATP-dependent Clp protease adaptor protein ClpS [Prevotella sp. oral taxon 317 str. F0108] gi|288329297|gb|EFC67883.1| ATP-dependent Clp protease adaptor protein ClpS [Prevotella sp. oral taxon 317 str. F0108] Length = 109 Score = 129 bits (326), Expect = 1e-28, Method: Composition-based stats. Identities = 31/91 (34%), Positives = 54/91 (59%) Query: 47 EVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECG 106 R + +R P+ Y+VL+ ND++T M+FV+ +L+ F+K A+ +ML VH G Sbjct: 18 RERIRTNLREPRKYKVLIHNDDFTTMDFVVMILKVVFFKSETEAEALMLAVHRSDKAVVG 77 Query: 107 VYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 VY+Y++A KV++ + +R YPL+ + Sbjct: 78 VYSYDVAMSKVSKATDMARHAGYPLRLTCQP 108 >gi|149195297|ref|ZP_01872385.1| hypothetical protein CMTB2_00354 [Caminibacter mediatlanticus TB-2] gi|149134561|gb|EDM23049.1| hypothetical protein CMTB2_00354 [Caminibacter mediatlanticus TB-2] Length = 83 Score = 129 bits (326), Expect = 1e-28, Method: Composition-based stats. Identities = 37/81 (45%), Positives = 53/81 (65%) Query: 57 PKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMK 116 PKLY+V+L+ND+YT +FVI +L+ F K E A + LKV +G G+Y YEIA MK Sbjct: 2 PKLYKVILLNDDYTTFDFVIEILKTVFGKSEEDAINLTLKVDREGSAVVGLYPYEIALMK 61 Query: 117 VNQVMNYSRQHQYPLQCIMEQ 137 V++V +R YPL+ +E+ Sbjct: 62 VDKVHQLARSAGYPLRARIEE 82 >gi|294084618|ref|YP_003551376.1| ATP-dependent Clp protease adaptor protein ClpS [Candidatus Puniceispirillum marinum IMCC1322] gi|292664191|gb|ADE39292.1| ATP-dependent Clp protease adaptor protein ClpS [Candidatus Puniceispirillum marinum IMCC1322] Length = 75 Score = 129 bits (325), Expect = 1e-28, Method: Composition-based stats. Identities = 39/75 (52%), Positives = 59/75 (78%) Query: 64 LVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNY 123 ++ND+YTPMEFV+HVLQ+FF + + A IML VH +G+G CG+Y++EIAE K ++ M Y Sbjct: 1 MMNDDYTPMEFVVHVLQHFFGRTADEATQIMLNVHQRGVGICGIYSFEIAETKASKTMEY 60 Query: 124 SRQHQYPLQCIMEQK 138 +RQ ++PLQ +E++ Sbjct: 61 ARQKEHPLQLQLEKE 75 >gi|15889508|ref|NP_355189.1| ATP-dependent Clp protease adaptor [Agrobacterium tumefaciens str. C58] gi|24638422|sp|Q8UD95|CLPS2_AGRT5 RecName: Full=ATP-dependent Clp protease adapter protein ClpS 2 gi|15157382|gb|AAK87974.1| ATP-dependent Clp protease adaptor protein ClpS [Agrobacterium tumefaciens str. C58] Length = 103 Score = 129 bits (324), Expect = 1e-28, Method: Composition-based stats. Identities = 31/102 (30%), Positives = 53/102 (51%) Query: 37 IAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLK 96 +++ L + + K+ PKLY+V+L+ND+YTP EFV VL+ F +T + +M+ Sbjct: 1 MSDSPVDLKPKPKVKPKLERPKLYKVMLLNDDYTPREFVTVVLKAVFRMSEDTGRRVMMT 60 Query: 97 VHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 H G V +IAE K + + ++ +PL E + Sbjct: 61 AHRFGSAVVVVCERDIAETKAKEATDLGKEAGFPLMFTTEPE 102 >gi|291277520|ref|YP_003517292.1| putative ATP-dependent Clp protease adapter protein ClpS [Helicobacter mustelae 12198] gi|290964714|emb|CBG40569.1| putative ATP-dependent Clp protease adapter protein, ClpS [Helicobacter mustelae 12198] Length = 100 Score = 129 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 37/91 (40%), Positives = 61/91 (67%) Query: 46 SEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGEC 105 S+ +K+ P + V+++ND+YTPM+FVI++L + F K+ + A IML+VHH+G G C Sbjct: 8 SQEMTLTKISEPIMASVIILNDDYTPMDFVINILMSVFEKNQDQATQIMLEVHHKGSGVC 67 Query: 106 GVYAYEIAEMKVNQVMNYSRQHQYPLQCIME 136 G+Y Y+IAE+K+ ++ Q PLQ ++ Sbjct: 68 GIYPYDIAELKLQIAREKTKTAQLPLQLELQ 98 >gi|118602881|ref|YP_904096.1| ATP-dependent Clp protease adaptor protein ClpS [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] gi|118567820|gb|ABL02625.1| ATP-dependent Clp protease adaptor protein ClpS [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] Length = 99 Score = 128 bits (323), Expect = 2e-28, Method: Composition-based stats. Identities = 38/77 (49%), Positives = 58/77 (75%) Query: 61 RVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQV 120 +VLL+ND+YT MEFVI VL FF K E A+ MLK+H +G G CG+++Y+IA+ KV QV Sbjct: 20 QVLLLNDDYTTMEFVIDVLVQFFSKSEEAAQATMLKIHIEGEGICGIFSYDIAQTKVTQV 79 Query: 121 MNYSRQHQYPLQCIMEQ 137 + ++R+++ PL C++ + Sbjct: 80 IEFARKNEQPLICVLRE 96 >gi|150018965|ref|YP_001311219.1| ATP-dependent Clp protease adaptor protein ClpS [Clostridium beijerinckii NCIMB 8052] gi|149905430|gb|ABR36263.1| ATP-dependent Clp protease adaptor protein ClpS [Clostridium beijerinckii NCIMB 8052] Length = 99 Score = 128 bits (323), Expect = 2e-28, Method: Composition-based stats. Identities = 35/97 (36%), Positives = 61/97 (62%) Query: 41 DNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQ 100 + + ++ + V+ PK Y+V++ ND+YT MEFVI++L F K A+ IML VH + Sbjct: 2 ETNIVTKPKNKVDVKKPKNYKVVMYNDDYTTMEFVINILVVVFNKKLIDAEKIMLDVHER 61 Query: 101 GIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 G G G+Y+Y+IA KV+ M+ +++ +P + +E+ Sbjct: 62 GKGIAGIYSYDIAVTKVSTAMSMAKEKGFPFKLTVEE 98 >gi|307944237|ref|ZP_07659578.1| ATP-dependent Clp protease adaptor protein ClpS [Roseibium sp. TrichSKD4] gi|307772583|gb|EFO31803.1| ATP-dependent Clp protease adaptor protein ClpS [Roseibium sp. TrichSKD4] Length = 101 Score = 128 bits (322), Expect = 2e-28, Method: Composition-based stats. Identities = 33/99 (33%), Positives = 55/99 (55%) Query: 40 FDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHH 99 D+ L + K+ PK Y+V+L+ND++TP EFV+ VL+ F D A+ +M H Sbjct: 2 SDSDLKTRKSIRQKLERPKRYQVILLNDDFTPAEFVVFVLKGEFRLDVLQAEHVMETAHK 61 Query: 100 QGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 +G Y ++AE KV++ + + YPL+ I+E + Sbjct: 62 KGANVVSTYPRDVAETKVSRATETAVRMGYPLKFIVEPE 100 >gi|224372651|ref|YP_002607023.1| ATP-dependent Clp protease adaptor protein ClpS [Nautilia profundicola AmH] gi|254763821|sp|B9L8R5|CLPS_NAUPA RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|223589176|gb|ACM92912.1| ATP-dependent Clp protease adaptor protein ClpS [Nautilia profundicola AmH] Length = 97 Score = 128 bits (322), Expect = 3e-28, Method: Composition-based stats. Identities = 39/94 (41%), Positives = 61/94 (64%) Query: 44 LDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIG 103 + V ++ +PKLY+V+L+ND+YT +FVI +L+ F+K+ E A I LKV +G Sbjct: 3 TKTVVENDVEIIMPKLYKVMLLNDDYTTFDFVIEILKTVFHKNEEEAINITLKVDREGSA 62 Query: 104 ECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 GVY YEIA++K+ + +RQ YPL+ +ME+ Sbjct: 63 AVGVYPYEIAQVKIEKTHTLARQAGYPLRAVMEE 96 >gi|332180262|gb|AEE15950.1| ATP-dependent Clp protease adapter protein clpS [Treponema brennaborense DSM 12168] Length = 110 Score = 128 bits (321), Expect = 4e-28, Method: Composition-based stats. Identities = 35/108 (32%), Positives = 59/108 (54%) Query: 30 SRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHET 89 + N + E N +++ V +++ P+ V L+ND++T EFV+ VL F+K E Sbjct: 2 EKQNGNEVRETGNGVEAVVDSYNEIMEPRDCTVFLLNDDFTTKEFVVEVLTAIFHKGTEE 61 Query: 90 AKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 A +M VH QG GVYA +IA + +R++ +PL+C +E+ Sbjct: 62 ATVLMETVHMQGKAAVGVYARDIAVTLAALTVKTARENGFPLRCELEE 109 >gi|224535859|ref|ZP_03676398.1| hypothetical protein BACCELL_00723 [Bacteroides cellulosilyticus DSM 14838] gi|224522582|gb|EEF91687.1| hypothetical protein BACCELL_00723 [Bacteroides cellulosilyticus DSM 14838] Length = 102 Score = 127 bits (320), Expect = 4e-28, Method: Composition-based stats. Identities = 28/92 (30%), Positives = 55/92 (59%) Query: 47 EVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECG 106 + + + +R P+ ++V++ ND++T MEFV+ +L F+K A+ +ML+VH G Sbjct: 9 KEKERTDLREPQHFKVIIYNDDFTTMEFVVKILTTIFFKSAAEAETLMLQVHKSQSAVVG 68 Query: 107 VYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 +Y Y+IA+ KV + +R+ +PL+ + + Sbjct: 69 IYTYDIAQSKVQKATRMAREENFPLRLTIAPE 100 >gi|329961966|ref|ZP_08299977.1| ATP-dependent Clp protease adaptor protein ClpS [Bacteroides fluxus YIT 12057] gi|328530614|gb|EGF57472.1| ATP-dependent Clp protease adaptor protein ClpS [Bacteroides fluxus YIT 12057] Length = 102 Score = 127 bits (320), Expect = 5e-28, Method: Composition-based stats. Identities = 29/92 (31%), Positives = 53/92 (57%) Query: 47 EVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECG 106 + R + +R P+ ++V + ND++T MEFV+ +L F+K A+ +M+KVH G Sbjct: 9 KERERTDLREPRRFKVTIYNDDFTTMEFVVKILTAVFFKSTAEAEALMMKVHESQSAVVG 68 Query: 107 VYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 +Y Y+IA+ KV + +R +PL+ + + Sbjct: 69 IYPYDIAQSKVQKATRMARNEGFPLRLTVTPE 100 >gi|239907009|ref|YP_002953750.1| ATP-dependent Clp protease adaptor protein ClpS [Desulfovibrio magneticus RS-1] gi|239796875|dbj|BAH75864.1| ATP-dependent Clp protease adaptor protein ClpS [Desulfovibrio magneticus RS-1] Length = 119 Score = 127 bits (319), Expect = 6e-28, Method: Composition-based stats. Identities = 41/97 (42%), Positives = 63/97 (64%) Query: 41 DNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQ 100 D + +VR P+ ++V+L ND+YT MEFV+ VL + F K+ A IML VH+ Sbjct: 22 DEQSGVGLSVEDEVREPRQFKVMLHNDDYTTMEFVVLVLVSVFRKNENEATQIMLNVHNT 81 Query: 101 GIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 G+G CG+Y E+AE+KV+ V ++++ YPL+C ME+ Sbjct: 82 GVGVCGIYTAEVAELKVSLVHRLAKENGYPLRCSMEE 118 >gi|255321468|ref|ZP_05362626.1| ATP-dependent Clp protease adaptor protein ClpS [Campylobacter showae RM3277] gi|255301324|gb|EET80583.1| ATP-dependent Clp protease adaptor protein ClpS [Campylobacter showae RM3277] Length = 103 Score = 127 bits (319), Expect = 6e-28, Method: Composition-based stats. Identities = 33/97 (34%), Positives = 59/97 (60%) Query: 42 NCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQG 101 + +V K P+ ++V+L+ND+ T M+FV+ VL F+ ++A +MLK+H++G Sbjct: 7 TERERDVAIKEKPEFPRKFKVILLNDDVTSMDFVVGVLVEIFHHTAQSAVAVMLKIHNEG 66 Query: 102 IGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 G G+Y EIA+ K NQ + + YPL+ ++E++ Sbjct: 67 SGVAGIYNKEIAQTKQNQTLKAAAAAGYPLKAVVEEE 103 >gi|189463818|ref|ZP_03012603.1| hypothetical protein BACINT_00151 [Bacteroides intestinalis DSM 17393] gi|189438768|gb|EDV07753.1| hypothetical protein BACINT_00151 [Bacteroides intestinalis DSM 17393] Length = 102 Score = 127 bits (319), Expect = 6e-28, Method: Composition-based stats. Identities = 28/92 (30%), Positives = 55/92 (59%) Query: 47 EVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECG 106 + + + +R P+ ++V++ ND++T MEFV+ +L F+K A+ +ML+VH G Sbjct: 9 KEKERTDLREPQHFKVIIFNDDFTTMEFVVKILTTIFFKSAAEAETLMLQVHKSQSAVVG 68 Query: 107 VYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 +Y Y+IA+ KV + +R+ +PL+ + + Sbjct: 69 IYTYDIAQSKVQKATRMAREENFPLRLTVAPE 100 >gi|27377747|ref|NP_769276.1| ATP-dependent Clp protease adaptor [Bradyrhizobium japonicum USDA 110] gi|37077101|sp|Q89RX6|CLPS1_BRAJA RecName: Full=ATP-dependent Clp protease adapter protein ClpS 1 gi|27350892|dbj|BAC47901.1| bll2636 [Bradyrhizobium japonicum USDA 110] Length = 101 Score = 126 bits (318), Expect = 7e-28, Method: Composition-based stats. Identities = 32/99 (32%), Positives = 50/99 (50%) Query: 40 FDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHH 99 D + R +KV PKL++V+L+ND+YTP EFV +L+ F + A +M+ H Sbjct: 2 NDAVTKPKTRTKTKVERPKLHKVILINDDYTPREFVTMILKAEFRMTEDQAYKVMITAHK 61 Query: 100 QGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 G V+ ++AE K + + R YPL E + Sbjct: 62 LGACVVAVFTRDVAETKATRATDAGRAKGYPLLFTTEPE 100 >gi|221067305|ref|ZP_03543410.1| ATP-dependent Clp protease adaptor protein ClpS [Comamonas testosteroni KF-1] gi|220712328|gb|EED67696.1| ATP-dependent Clp protease adaptor protein ClpS [Comamonas testosteroni KF-1] Length = 76 Score = 126 bits (318), Expect = 7e-28, Method: Composition-based stats. Identities = 37/74 (50%), Positives = 51/74 (68%) Query: 64 LVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNY 123 ++ND++TPMEFVI VLQ F KD E+A IMLK+H G G CGVY+ ++A KV QV+ Sbjct: 1 MLNDDFTPMEFVIAVLQELFGKDRESATQIMLKIHLDGRGVCGVYSQDVAATKVEQVLQA 60 Query: 124 SRQHQYPLQCIMEQ 137 +++ +PLQ E Sbjct: 61 AQKAGHPLQATFEP 74 >gi|300726156|ref|ZP_07059613.1| ATP-dependent Clp protease adaptor protein ClpS [Prevotella bryantii B14] gi|299776626|gb|EFI73179.1| ATP-dependent Clp protease adaptor protein ClpS [Prevotella bryantii B14] Length = 98 Score = 126 bits (318), Expect = 8e-28, Method: Composition-based stats. Identities = 32/97 (32%), Positives = 57/97 (58%) Query: 42 NCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQG 101 + +S ++ K++ P+ Y+V+ ND+ T M+FVI VL F+K ++ A+ +M+KVH G Sbjct: 2 SQTNSNIKERIKLKEPRRYQVIFFNDDVTTMDFVIEVLTTVFHKAYQEAEELMMKVHLNG 61 Query: 102 IGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 GVY+Y+IA K + + +PL+ M+ + Sbjct: 62 SAVVGVYSYDIALTKTTNASEMAHKAGFPLRIEMQAE 98 >gi|288870037|ref|ZP_06112699.2| ATP-dependent Clp protease adaptor protein ClpS [Clostridium hathewayi DSM 13479] gi|288868668|gb|EFD00967.1| ATP-dependent Clp protease adaptor protein ClpS [Clostridium hathewayi DSM 13479] Length = 111 Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats. Identities = 33/110 (30%), Positives = 60/110 (54%) Query: 27 MADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKD 86 M S +++G + +++ PK Y+V++ ND++TPM+ V+ +L + F K+ Sbjct: 1 MKFSDPDQEGRYSMPANTGLSEKTEIRLKQPKQYKVVMYNDDFTPMDVVVEILIDVFRKN 60 Query: 87 HETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIME 136 +E A IM+ VH GVY+Y+IA K + + +R+ YP + +E Sbjct: 61 YEEAVAIMMTVHKGQRAVVGVYSYDIAMTKAARAVKIAREQGYPFRVEVE 110 >gi|260909905|ref|ZP_05916593.1| ATP-dependent Clp protease adaptor protein ClpS [Prevotella sp. oral taxon 472 str. F0295] gi|260635950|gb|EEX53952.1| ATP-dependent Clp protease adaptor protein ClpS [Prevotella sp. oral taxon 472 str. F0295] Length = 100 Score = 126 bits (316), Expect = 1e-27, Method: Composition-based stats. Identities = 30/91 (32%), Positives = 53/91 (58%) Query: 47 EVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECG 106 R + +R P+ Y+VL+ ND++T M+FV+ +L+ F+K A+ +ML VH G Sbjct: 9 RERVHTNIREPRKYKVLIHNDDFTTMDFVVMILKVVFFKTDTEAETLMLTVHRSSQAVVG 68 Query: 107 VYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 VY+Y++A KV + + +R +PL+ + Sbjct: 69 VYSYDVALSKVKKATDMARHAGFPLRLTCQP 99 >gi|160888888|ref|ZP_02069891.1| hypothetical protein BACUNI_01308 [Bacteroides uniformis ATCC 8492] gi|156861787|gb|EDO55218.1| hypothetical protein BACUNI_01308 [Bacteroides uniformis ATCC 8492] Length = 103 Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats. Identities = 30/92 (32%), Positives = 53/92 (57%) Query: 47 EVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECG 106 + + ++R P+ ++V + ND++T MEFV+ VL FYK A+ +ML+VH G Sbjct: 9 KEKERIELREPRRFKVTIYNDDFTTMEFVVKVLTTVFYKSSAEAETLMLQVHKSNSAVVG 68 Query: 107 VYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 +Y+Y+IA KV + +R +PL+ + + Sbjct: 69 IYSYDIAHSKVQKATRMARNEGFPLRLTVTPE 100 >gi|323485967|ref|ZP_08091299.1| ATP-dependent Clp protease adaptor protein ClpS [Clostridium symbiosum WAL-14163] gi|323400729|gb|EGA93095.1| ATP-dependent Clp protease adaptor protein ClpS [Clostridium symbiosum WAL-14163] Length = 100 Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats. Identities = 36/97 (37%), Positives = 56/97 (57%) Query: 42 NCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQG 101 + + S+VRVPK Y V++ ND+YTPM+FV+ VL F K E A +M+ VH G Sbjct: 3 TKGEIRQQTKSQVRVPKRYSVIMHNDDYTPMDFVVQVLMEIFNKRKEEAVMLMMMVHKGG 62 Query: 102 IGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 G+Y+Y+IA K+ V + + YP + +E++ Sbjct: 63 KAVVGMYSYDIALTKIRLVTALAEEEGYPFRLTVEEQ 99 >gi|323693039|ref|ZP_08107259.1| ATP-dependent Clp protease adaptor protein ClpS [Clostridium symbiosum WAL-14673] gi|323502920|gb|EGB18762.1| ATP-dependent Clp protease adaptor protein ClpS [Clostridium symbiosum WAL-14673] Length = 100 Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats. Identities = 36/97 (37%), Positives = 56/97 (57%) Query: 42 NCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQG 101 + + S+VRVPK Y V++ ND+YTPM+FV+ VL F K E A +M+ VH G Sbjct: 3 TKGEIRQQTKSQVRVPKRYSVIMHNDDYTPMDFVVRVLMEIFNKRKEEAVMLMMMVHKGG 62 Query: 102 IGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 G+Y+Y+IA K+ V + + YP + +E++ Sbjct: 63 KAVVGMYSYDIALTKIRLVTALAEEEGYPFRLTVEEQ 99 >gi|182419260|ref|ZP_02950513.1| ATP-dependent Clp protease adaptor protein ClpS [Clostridium butyricum 5521] gi|237667653|ref|ZP_04527637.1| ATP-dependent Clp protease adaptor protein ClpS [Clostridium butyricum E4 str. BoNT E BL5262] gi|182376900|gb|EDT74471.1| ATP-dependent Clp protease adaptor protein ClpS [Clostridium butyricum 5521] gi|237656001|gb|EEP53557.1| ATP-dependent Clp protease adaptor protein ClpS [Clostridium butyricum E4 str. BoNT E BL5262] Length = 99 Score = 125 bits (314), Expect = 2e-27, Method: Composition-based stats. Identities = 33/78 (42%), Positives = 49/78 (62%) Query: 60 YRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQ 119 Y+V++ ND+YT MEFVI +L N F K A+ IML VH +G G G+Y+Y+IA KV Sbjct: 21 YKVIMHNDDYTTMEFVIKILVNIFNKSFIDAEKIMLDVHKKGRGVAGIYSYDIAITKVAT 80 Query: 120 VMNYSRQHQYPLQCIMEQ 137 M+ ++ +P + E+ Sbjct: 81 AMSMAKSEGFPFKLTTEE 98 >gi|237711936|ref|ZP_04542417.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA] gi|237725805|ref|ZP_04556286.1| conserved hypothetical protein [Bacteroides sp. D4] gi|265753171|ref|ZP_06088740.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA] gi|229435613|gb|EEO45690.1| conserved hypothetical protein [Bacteroides dorei 5_1_36/D4] gi|229454631|gb|EEO60352.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA] gi|263236357|gb|EEZ21852.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA] Length = 102 Score = 124 bits (312), Expect = 3e-27, Method: Composition-based stats. Identities = 26/92 (28%), Positives = 52/92 (56%) Query: 47 EVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECG 106 + + + P+ ++V++ ND++T MEFV+ +L F+K A+ +M++VH G Sbjct: 9 KEKERIDLHEPRRFKVIIFNDDFTTMEFVVKILTTVFFKSTMEAEALMMQVHKSESAVVG 68 Query: 107 VYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 +Y Y+IA KV + +R+ +PL+ + + Sbjct: 69 IYTYDIARSKVQKATRMAREEGFPLRLTVTPE 100 >gi|212691640|ref|ZP_03299768.1| hypothetical protein BACDOR_01135 [Bacteroides dorei DSM 17855] gi|212665829|gb|EEB26401.1| hypothetical protein BACDOR_01135 [Bacteroides dorei DSM 17855] Length = 107 Score = 124 bits (312), Expect = 3e-27, Method: Composition-based stats. Identities = 26/92 (28%), Positives = 52/92 (56%) Query: 47 EVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECG 106 + + + P+ ++V++ ND++T MEFV+ +L F+K A+ +M++VH G Sbjct: 14 KEKERIDLHEPRRFKVIIFNDDFTTMEFVVKILTTVFFKSTMEAEALMIQVHKSESAVVG 73 Query: 107 VYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 +Y Y+IA KV + +R+ +PL+ + + Sbjct: 74 IYTYDIARSKVQKATRMAREEGFPLRLTVTPE 105 >gi|223040454|ref|ZP_03610728.1| ATP-dependent Clp protease adaptor protein ClpS [Campylobacter rectus RM3267] gi|222878304|gb|EEF13411.1| ATP-dependent Clp protease adaptor protein ClpS [Campylobacter rectus RM3267] Length = 103 Score = 124 bits (312), Expect = 4e-27, Method: Composition-based stats. Identities = 35/97 (36%), Positives = 60/97 (61%) Query: 42 NCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQG 101 + +V K P+ ++V+L+ND+ T M+FV+ VL F+ ++A +MLK+H++G Sbjct: 7 TERERDVALKEKPEFPRKFKVVLLNDDVTSMDFVVSVLVEIFHHTTQSAVTVMLKIHNEG 66 Query: 102 IGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 G GVYA EIA+ K + V+ + YPL+ I+E++ Sbjct: 67 SGIAGVYAKEIAQTKQSDVLKAAAVAGYPLKAIIEEE 103 >gi|270293657|ref|ZP_06199859.1| conserved hypothetical protein [Bacteroides sp. D20] gi|317479379|ref|ZP_07938513.1| ATP-dependent Clp protease adaptor protein ClpS [Bacteroides sp. 4_1_36] gi|270275124|gb|EFA20984.1| conserved hypothetical protein [Bacteroides sp. D20] gi|316904453|gb|EFV26273.1| ATP-dependent Clp protease adaptor protein ClpS [Bacteroides sp. 4_1_36] Length = 103 Score = 124 bits (312), Expect = 4e-27, Method: Composition-based stats. Identities = 30/92 (32%), Positives = 53/92 (57%) Query: 47 EVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECG 106 + + ++R P+ ++V + ND++T MEFV+ VL FYK A+ +ML+VH G Sbjct: 9 KEKERIELREPRRFKVTIYNDDFTTMEFVVKVLTTVFYKSSVEAETLMLQVHKSNSAVVG 68 Query: 107 VYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 +Y+Y+IA KV + +R +PL+ + + Sbjct: 69 IYSYDIAHSKVQKATRMARNEGFPLRLTVTPE 100 >gi|39648126|emb|CAE26646.1| conserved hypothetical protein [Rhodopseudomonas palustris CGA009] Length = 78 Score = 122 bits (308), Expect = 1e-26, Method: Composition-based stats. Identities = 28/77 (36%), Positives = 43/77 (55%) Query: 62 VLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVM 121 ++LVND+YTP EFV+ VL+ F + A +ML H +G+ GV+ ++AE K + Sbjct: 1 MILVNDDYTPREFVVSVLKGEFRMTEDQATKVMLTAHQRGVCVVGVFTKDVAETKATRAT 60 Query: 122 NYSRQHQYPLQCIMEQK 138 + R YPL E + Sbjct: 61 DAGRAKGYPLLFTTEPE 77 >gi|326562900|gb|EGE13187.1| ATP-dependent Clp protease adaptor protein ClpS [Moraxella catarrhalis 46P47B1] gi|326565261|gb|EGE15446.1| ATP-dependent Clp protease adaptor protein ClpS [Moraxella catarrhalis 12P80B1] gi|326570971|gb|EGE20995.1| ATP-dependent Clp protease adaptor protein ClpS [Moraxella catarrhalis BC7] gi|326575834|gb|EGE25757.1| ATP-dependent Clp protease adaptor protein ClpS [Moraxella catarrhalis CO72] gi|326576916|gb|EGE26822.1| ATP-dependent Clp protease adaptor protein ClpS [Moraxella catarrhalis O35E] Length = 121 Score = 122 bits (308), Expect = 1e-26, Method: Composition-based stats. Identities = 36/112 (32%), Positives = 62/112 (55%) Query: 26 FMADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYK 85 F+ + + K ++ + D +V+ PKLY V++ NDNYT M+FV++VL F Sbjct: 9 FLIKAVQDFKSPSKHRSDTDVITETKIQVKQPKLYTVIMYNDNYTTMDFVVYVLVEIFQH 68 Query: 86 DHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 + + A +M+++H G + Y++AEMKV++V + Q YPL +E Sbjct: 69 NIDKAYQLMMQIHELGQAAVALLPYDLAEMKVDEVTALAEQESYPLLTTIEP 120 >gi|254884992|ref|ZP_05257702.1| ATP-dependent Clp protease adapter protein clpS [Bacteroides sp. 4_3_47FAA] gi|294776011|ref|ZP_06741507.1| ATP-dependent Clp protease adaptor protein ClpS [Bacteroides vulgatus PC510] gi|254837785|gb|EET18094.1| ATP-dependent Clp protease adapter protein clpS [Bacteroides sp. 4_3_47FAA] gi|294450149|gb|EFG18653.1| ATP-dependent Clp protease adaptor protein ClpS [Bacteroides vulgatus PC510] Length = 107 Score = 122 bits (308), Expect = 1e-26, Method: Composition-based stats. Identities = 27/92 (29%), Positives = 52/92 (56%) Query: 47 EVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECG 106 + + +R P+ ++V + ND++T MEFV+ +L F+K A+ +M++VH G Sbjct: 14 KEKERIDLREPRRFKVTIFNDDFTTMEFVVKILTTVFFKSTMEAEALMMQVHKSESAVIG 73 Query: 107 VYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 +Y Y+IA KV + +R+ +PL+ + + Sbjct: 74 IYTYDIARSKVQKATRMAREEGFPLRLTVTPE 105 >gi|150003219|ref|YP_001297963.1| hypothetical protein BVU_0633 [Bacteroides vulgatus ATCC 8482] gi|319640394|ref|ZP_07995118.1| hypothetical protein HMPREF9011_00715 [Bacteroides sp. 3_1_40A] gi|149931643|gb|ABR38341.1| conserved hypothetical protein [Bacteroides vulgatus ATCC 8482] gi|317387997|gb|EFV68852.1| hypothetical protein HMPREF9011_00715 [Bacteroides sp. 3_1_40A] Length = 102 Score = 122 bits (308), Expect = 1e-26, Method: Composition-based stats. Identities = 27/92 (29%), Positives = 52/92 (56%) Query: 47 EVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECG 106 + + +R P+ ++V + ND++T MEFV+ +L F+K A+ +M++VH G Sbjct: 9 KEKERIDLREPRRFKVTIFNDDFTTMEFVVKILTTVFFKSTMEAEALMMQVHKSESAVIG 68 Query: 107 VYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 +Y Y+IA KV + +R+ +PL+ + + Sbjct: 69 IYTYDIARSKVQKATRMAREEGFPLRLTVTPE 100 >gi|326563659|gb|EGE13911.1| ATP-dependent Clp protease adaptor protein ClpS [Moraxella catarrhalis 103P14B1] gi|326573267|gb|EGE23235.1| ATP-dependent Clp protease adaptor protein ClpS [Moraxella catarrhalis 101P30B1] Length = 112 Score = 121 bits (304), Expect = 3e-26, Method: Composition-based stats. Identities = 36/111 (32%), Positives = 62/111 (55%) Query: 27 MADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKD 86 M + + K ++ + D+ +V+ PKLY V++ NDNYT M+FV++VL F + Sbjct: 1 MIKAVQDFKSPSKHRSDTDAITETKIQVKQPKLYTVIMYNDNYTTMDFVVYVLVEIFQHN 60 Query: 87 HETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 + A +M+++H G + Y++AEMKV++V + Q YPL +E Sbjct: 61 IDKAYQLMMQIHELGQAAVALLPYDLAEMKVDEVTALAEQESYPLLTTIEP 111 >gi|296113266|ref|YP_003627204.1| ATP-dependent Clp protease adaptor protein ClpS [Moraxella catarrhalis RH4] gi|295920961|gb|ADG61312.1| ATP-dependent Clp protease adaptor protein ClpS [Moraxella catarrhalis RH4] gi|326570234|gb|EGE20279.1| ATP-dependent Clp protease adaptor protein ClpS [Moraxella catarrhalis BC8] Length = 112 Score = 121 bits (303), Expect = 4e-26, Method: Composition-based stats. Identities = 36/111 (32%), Positives = 61/111 (54%) Query: 27 MADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKD 86 M + + K ++ + D +V+ PKLY V++ NDNYT M+FV++VL F + Sbjct: 1 MIKAVQDFKSPSKHRSDTDVITETKIQVKQPKLYTVIMYNDNYTTMDFVVYVLVEIFQHN 60 Query: 87 HETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 + A +M+++H G + Y++AEMKV++V + Q YPL +E Sbjct: 61 IDKAYQLMMQIHELGQAAVALLPYDLAEMKVDEVTALAEQESYPLLTTIEP 111 >gi|148925993|ref|ZP_01809679.1| hypothetical protein Cj8486_0964c [Campylobacter jejuni subsp. jejuni CG8486] gi|145845472|gb|EDK22564.1| hypothetical protein Cj8486_0964c [Campylobacter jejuni subsp. jejuni CG8486] Length = 82 Score = 121 bits (303), Expect = 4e-26, Method: Composition-based stats. Identities = 32/77 (41%), Positives = 50/77 (64%) Query: 45 DSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGE 104 ++ +K+ PK+Y+V+L+ND+ T M+FVI +L N F+++ E A ML++HH G G Sbjct: 3 KTQTLEQTKLSEPKMYKVILLNDDVTTMDFVIEILMNIFHQNLEKASQTMLEIHHNGSGI 62 Query: 105 CGVYAYEIAEMKVNQVM 121 CG+Y EIA K +V Sbjct: 63 CGIYTQEIALSKQKKVN 79 >gi|281422658|ref|ZP_06253657.1| ATP-dependent Clp protease adaptor protein ClpS [Prevotella copri DSM 18205] gi|281403328|gb|EFB34008.1| ATP-dependent Clp protease adaptor protein ClpS [Prevotella copri DSM 18205] Length = 100 Score = 121 bits (303), Expect = 5e-26, Method: Composition-based stats. Identities = 33/92 (35%), Positives = 58/92 (63%) Query: 47 EVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECG 106 R ++++ P Y V++ ND++TPM+FV+ +L++ F+K A+ IMLKVHH+ G Sbjct: 9 RERQKTRLKEPGRYVVMMFNDDFTPMDFVVEILESIFFKSQAEAEAIMLKVHHEEKAVVG 68 Query: 107 VYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 Y+Y+IA+ KV + M +R ++PL+ + Sbjct: 69 TYSYDIAKSKVEKAMEKARTQKFPLKLTYMPE 100 >gi|262277126|ref|ZP_06054919.1| ATP-dependent Clp protease adaptor protein ClpS [alpha proteobacterium HIMB114] gi|262224229|gb|EEY74688.1| ATP-dependent Clp protease adaptor protein ClpS [alpha proteobacterium HIMB114] Length = 100 Score = 121 bits (303), Expect = 5e-26, Method: Composition-based stats. Identities = 31/92 (33%), Positives = 63/92 (68%) Query: 46 SEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGEC 105 S++ F + + PK ++++L+ND++T M+FV+ +L F K + A +MLK+H++G C Sbjct: 9 SQLEFREQTKKPKFFKLILLNDDFTTMDFVVKILVMFLNKSNHEANFLMLKIHNEGSAIC 68 Query: 106 GVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 GV+ ++A N++ N+S+ ++ PL+CI+++ Sbjct: 69 GVFPKDVAVTIQNKIHNFSKINKQPLKCIVKE 100 >gi|326560256|gb|EGE10644.1| ATP-dependent Clp protease adaptor protein ClpS [Moraxella catarrhalis 7169] gi|326566426|gb|EGE16576.1| ATP-dependent Clp protease adaptor protein ClpS [Moraxella catarrhalis BC1] Length = 121 Score = 120 bits (302), Expect = 5e-26, Method: Composition-based stats. Identities = 36/112 (32%), Positives = 63/112 (56%) Query: 26 FMADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYK 85 F+ + + K ++ + D +V+ PKLY V++ NDNYT M+FV++VL F Sbjct: 9 FLIKAVQDFKSPSKHRSDTDVITETKIQVKQPKLYTVIMYNDNYTTMDFVVYVLVEIFQH 68 Query: 86 DHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 + + A +M+++H G + Y++AEMKV++V + Q YPL ++E Sbjct: 69 NIDKAYQLMMQIHELGQAAVALLPYDLAEMKVDEVTALAEQESYPLLTMIEP 120 >gi|317010313|gb|ADU84060.1| ATP-dependent Clp protease adapter protein clpS [Helicobacter pylori SouthAfrica7] Length = 91 Score = 120 bits (302), Expect = 6e-26, Method: Composition-based stats. Identities = 33/85 (38%), Positives = 54/85 (63%) Query: 53 KVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEI 112 K+ P + +V+++ND+ T EFVI L++FF K + AK +ML +H G G CGVY Y+I Sbjct: 5 KIPTPTMSQVIMLNDSITTAEFVISALRDFFDKPLKEAKELMLSIHRDGEGVCGVYPYDI 64 Query: 113 AEMKVNQVMNYSRQHQYPLQCIMEQ 137 A + V + +R +PL+ ++E+ Sbjct: 65 ARYRAACVKDKARALNFPLRLLVEE 89 >gi|226330747|ref|ZP_03806265.1| hypothetical protein PROPEN_04667 [Proteus penneri ATCC 35198] gi|225201542|gb|EEG83896.1| hypothetical protein PROPEN_04667 [Proteus penneri ATCC 35198] Length = 67 Score = 119 bits (298), Expect = 2e-25, Method: Composition-based stats. Identities = 35/66 (53%), Positives = 47/66 (71%) Query: 72 MEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPL 131 M+FV+ VL +F+ E A IML VHH+G G CGVY+ +IAE KV QV Y+R+++YPL Sbjct: 1 MDFVVEVLTMYFFLSEEKATQIMLDVHHKGKGVCGVYSADIAETKVAQVNLYARENEYPL 60 Query: 132 QCIMEQ 137 C +EQ Sbjct: 61 LCTLEQ 66 >gi|315926527|gb|EFV05908.1| ATP-dependent Clp protease adaptor protein ClpS family protein [Campylobacter jejuni subsp. jejuni DFVF1099] Length = 106 Score = 117 bits (295), Expect = 3e-25, Method: Composition-based stats. Identities = 31/75 (41%), Positives = 49/75 (65%) Query: 45 DSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGE 104 ++ +K+ PK+Y+V+L+ND+ T M+FVI +L N F+++ E A ML++HH G G Sbjct: 3 KTQTLEQTKLSEPKMYKVILLNDDVTTMDFVIEILMNIFHQNLEKASQTMLEIHHNGSGI 62 Query: 105 CGVYAYEIAEMKVNQ 119 CG+Y EIA K + Sbjct: 63 CGIYTQEIALSKQKK 77 >gi|262394728|ref|YP_003286582.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio sp. Ex25] gi|262338322|gb|ACY52117.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio sp. Ex25] Length = 67 Score = 117 bits (295), Expect = 4e-25, Method: Composition-based stats. Identities = 35/66 (53%), Positives = 47/66 (71%) Query: 72 MEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPL 131 M+FVI VL+ FF D + A IMLK+H++G CG Y+ EIAE KV QV Y+R++++PL Sbjct: 1 MDFVIEVLERFFSHDIDKATQIMLKIHYEGKAICGTYSAEIAETKVAQVTMYARENEHPL 60 Query: 132 QCIMEQ 137 C MEQ Sbjct: 61 LCTMEQ 66 >gi|109946679|ref|YP_663907.1| hypothetical protein Hac_0045 [Helicobacter acinonychis str. Sheeba] gi|109713900|emb|CAJ98908.1| conserved hypothetical protein [Helicobacter acinonychis str. Sheeba] Length = 91 Score = 117 bits (293), Expect = 6e-25, Method: Composition-based stats. Identities = 34/85 (40%), Positives = 54/85 (63%) Query: 53 KVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEI 112 K+ +P + V+++ND T EFVI L++ F K E A+ +ML +HH G G CGVY YEI Sbjct: 5 KIPIPTMSGVIMLNDPVTKAEFVISTLRDVFDKSLEEAQDLMLSIHHNGDGVCGVYPYEI 64 Query: 113 AEMKVNQVMNYSRQHQYPLQCIMEQ 137 A K V + +R ++PL+ ++++ Sbjct: 65 AIYKAVCVRDKARALKFPLRLMVQE 89 >gi|254503767|ref|ZP_05115918.1| ATP-dependent Clp protease adaptor protein ClpS [Labrenzia alexandrii DFL-11] gi|222439838|gb|EEE46517.1| ATP-dependent Clp protease adaptor protein ClpS [Labrenzia alexandrii DFL-11] Length = 77 Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats. Identities = 27/77 (35%), Positives = 45/77 (58%) Query: 62 VLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVM 121 ++L+ND+YTP EFV+ +L+ F D A +ML H +G VY ++AE K + + Sbjct: 1 MVLLNDDYTPREFVVLILKGEFRLDSAQADVVMLTAHQKGACVVSVYPKDVAETKATRAI 60 Query: 122 NYSRQHQYPLQCIMEQK 138 + + + YPLQ +E + Sbjct: 61 DAAGRLGYPLQFSVEPE 77 >gi|254462423|ref|ZP_05075839.1| ATP-dependent Clp protease adaptor protein ClpS [Rhodobacterales bacterium HTCC2083] gi|206679012|gb|EDZ43499.1| ATP-dependent Clp protease adaptor protein ClpS [Rhodobacteraceae bacterium HTCC2083] Length = 67 Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats. Identities = 34/67 (50%), Positives = 50/67 (74%) Query: 72 MEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPL 131 MEFV+ +L+ FF +H + IML VH +G+ GV++ EIAE KV QVM+++R+HQ+PL Sbjct: 1 MEFVVLILERFFGLNHAQSFEIMLTVHQKGVAVVGVFSQEIAETKVGQVMDFARRHQHPL 60 Query: 132 QCIMEQK 138 QC ME++ Sbjct: 61 QCTMEKE 67 >gi|288801352|ref|ZP_06406806.1| ATP-dependent Clp protease adaptor protein ClpS [Prevotella sp. oral taxon 299 str. F0039] gi|288331735|gb|EFC70219.1| ATP-dependent Clp protease adaptor protein ClpS [Prevotella sp. oral taxon 299 str. F0039] Length = 101 Score = 115 bits (288), Expect = 2e-24, Method: Composition-based stats. Identities = 28/95 (29%), Positives = 56/95 (58%), Gaps = 2/95 (2%) Query: 45 DSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGE 104 + + + K+ P+ Y++L+ ND T M+FV+H+L + F K+ A +M+ +H +G Sbjct: 7 KVKDKINQKISEPRKYKILMYNDEVTTMDFVVHLLMHVFNKNKAVAYELMMTIHQKGSAL 66 Query: 105 CGVYAYEIAEMKVNQVMNYSRQHQYPL--QCIMEQ 137 GVY+Y++A+ K+ Q +PL +C++++ Sbjct: 67 VGVYSYDVAQTKMEQAKEIIAHSGFPLVIKCLIDK 101 >gi|219848162|ref|YP_002462595.1| ATP-dependent Clp protease adaptor protein ClpS [Chloroflexus aggregans DSM 9485] gi|219542421|gb|ACL24159.1| ATP-dependent Clp protease adaptor protein ClpS [Chloroflexus aggregans DSM 9485] Length = 107 Score = 114 bits (287), Expect = 3e-24, Method: Composition-based stats. Identities = 30/87 (34%), Positives = 50/87 (57%), Gaps = 2/87 (2%) Query: 51 SSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAY 110 ++ P YRV++ ND+ TPM+FV+ VL+ FF D A+ +ML H++G V + Sbjct: 21 DEELERP--YRVIVQNDDVTPMDFVVIVLRVFFGLDLARAEQVMLTAHYEGRALVTVLPF 78 Query: 111 EIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 + A+ +V Q + +R+ YPL +E Sbjct: 79 QEAQERVYQAHHAAREAGYPLTFYLEP 105 >gi|326538898|gb|ADZ87113.1| ATP-dependent Clp protease adaptor protein ClpS [Brucella melitensis M5-90] Length = 63 Score = 114 bits (285), Expect = 5e-24, Method: Composition-based stats. Identities = 38/63 (60%), Positives = 53/63 (84%) Query: 76 IHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIM 135 +HVLQ FF K+ + A IML VH+ G+GECGV+ YE+AE KV+QVM+++RQ+Q+PLQC+M Sbjct: 1 MHVLQRFFQKNLDDATRIMLHVHNHGVGECGVFTYEVAETKVSQVMDFARQNQHPLQCVM 60 Query: 136 EQK 138 E+K Sbjct: 61 EKK 63 >gi|261210696|ref|ZP_05924988.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio sp. RC341] gi|260840181|gb|EEX66761.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio sp. RC341] Length = 67 Score = 114 bits (285), Expect = 5e-24, Method: Composition-based stats. Identities = 34/66 (51%), Positives = 46/66 (69%) Query: 72 MEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPL 131 M+FVI +L+ FF D E A +MLKVH++G CG + E+AE KV QV YSR++++PL Sbjct: 1 MDFVIEILERFFSMDIERATQVMLKVHYEGKAICGTFTAEVAETKVAQVTMYSRENEHPL 60 Query: 132 QCIMEQ 137 C MEQ Sbjct: 61 LCTMEQ 66 >gi|307636717|gb|ADN79167.1| ATP-dependent Clp protease adaptor protein [Helicobacter pylori 908] gi|325995303|gb|ADZ50708.1| ATP-dependent Clp protease adaptor protein [Helicobacter pylori 2018] gi|325996901|gb|ADZ49109.1| ATP-dependent Clp protease adaptor protein [Helicobacter pylori 2017] Length = 89 Score = 114 bits (285), Expect = 5e-24, Method: Composition-based stats. Identities = 31/85 (36%), Positives = 55/85 (64%) Query: 53 KVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEI 112 ++ P + +V+++ND+ T EF++ L++FF K E A+ +ML +H G G CGVY YEI Sbjct: 3 QIPTPTMSQVIMLNDSITTAEFMVSALRDFFDKPLEEAQELMLSIHRDGDGVCGVYPYEI 62 Query: 113 AEMKVNQVMNYSRQHQYPLQCIMEQ 137 A K V + +R ++PL+ ++++ Sbjct: 63 AIYKAVCVRDKARALRFPLRLMVQE 87 >gi|163848160|ref|YP_001636204.1| ATP-dependent Clp protease adaptor protein ClpS [Chloroflexus aurantiacus J-10-fl] gi|222526063|ref|YP_002570534.1| ATP-dependent Clp protease adaptor protein ClpS [Chloroflexus sp. Y-400-fl] gi|163669449|gb|ABY35815.1| ATP-dependent Clp protease adaptor protein ClpS [Chloroflexus aurantiacus J-10-fl] gi|222449942|gb|ACM54208.1| ATP-dependent Clp protease adaptor protein ClpS [Chloroflexus sp. Y-400-fl] Length = 108 Score = 113 bits (284), Expect = 6e-24, Method: Composition-based stats. Identities = 31/90 (34%), Positives = 50/90 (55%), Gaps = 2/90 (2%) Query: 48 VRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGV 107 V ++ P YRV++ ND+ TPM+FV+ VL+ FF D A+ +ML H++G V Sbjct: 18 VASDEELERP--YRVIVQNDDVTPMDFVVIVLRVFFGLDLARAEQVMLTAHYEGRALVTV 75 Query: 108 YAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 + A+ +V Q + +R+ YPL +E Sbjct: 76 LPLQEAQERVYQAHHAAREAGYPLTFYLEP 105 >gi|308183832|ref|YP_003927965.1| ATP-dependent Clp protease adapter protein clpS [Helicobacter pylori SJM180] gi|308059752|gb|ADO01648.1| ATP-dependent Clp protease adapter protein clpS [Helicobacter pylori SJM180] gi|317013455|gb|ADU80891.1| ATP-dependent Clp protease adapter protein ClpS [Helicobacter pylori Gambia94/24] Length = 91 Score = 113 bits (283), Expect = 8e-24, Method: Composition-based stats. Identities = 31/85 (36%), Positives = 55/85 (64%) Query: 53 KVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEI 112 ++ P + +V+++ND+ T EF++ L++FF K E A+ +ML +H G G CGVY YEI Sbjct: 5 QIPTPTMSQVIMLNDSITTAEFMVSALRDFFDKPLEEAQKLMLSIHRDGDGVCGVYPYEI 64 Query: 113 AEMKVNQVMNYSRQHQYPLQCIMEQ 137 A K V + +R ++PL+ ++++ Sbjct: 65 AIYKAVCVRDKARALRFPLRLMVQE 89 >gi|283797982|ref|ZP_06347135.1| ATP-dependent Clp protease adaptor protein ClpS [Clostridium sp. M62/1] gi|291074282|gb|EFE11646.1| ATP-dependent Clp protease adaptor protein ClpS [Clostridium sp. M62/1] gi|295090086|emb|CBK76193.1| Uncharacterized conserved protein [Clostridium cf. saccharolyticum K10] Length = 99 Score = 113 bits (283), Expect = 9e-24, Method: Composition-based stats. Identities = 29/95 (30%), Positives = 53/95 (55%) Query: 43 CLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGI 102 + K++ P LY V++ ND++T M+FV+ +L F+K+HE A +M+ VH+ Sbjct: 4 QTGVKEDTKIKLKKPSLYHVVMHNDDFTTMDFVVEILMTIFHKEHEEAVALMMLVHNIQR 63 Query: 103 GECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 G Y+Y+IA K + +R+ +P + +E+ Sbjct: 64 AVVGTYSYDIARTKAEEAEERAREQGFPFRLSVEE 98 >gi|207092784|ref|ZP_03240571.1| hypothetical protein HpylHP_08043 [Helicobacter pylori HPKX_438_AG0C1] Length = 91 Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats. Identities = 31/85 (36%), Positives = 51/85 (60%) Query: 53 KVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEI 112 + P + +V++V+D T EFVI L++FF K E AK + +H G G CGVY Y+I Sbjct: 5 NIPTPTMAQVIMVDDPITTAEFVISALRDFFDKSLEEAKALTSSIHRDGCGVCGVYPYDI 64 Query: 113 AEMKVNQVMNYSRQHQYPLQCIMEQ 137 A + V + +R ++PL+ ++E+ Sbjct: 65 ARHRAAWVKDKARALEFPLKLLVEE 89 >gi|237750929|ref|ZP_04581409.1| ATP-dependent Clp protease adapter protein clpS [Helicobacter bilis ATCC 43879] gi|229373374|gb|EEO23765.1| ATP-dependent Clp protease adapter protein clpS [Helicobacter bilis ATCC 43879] Length = 107 Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats. Identities = 33/97 (34%), Positives = 55/97 (56%) Query: 39 EFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVH 98 E+ + E ++ P++ ++L+ND+YT ++FVI +L F K A+ I VH Sbjct: 7 EYSDSAHFETLHEVEIAQPRMQEIILLNDDYTSVDFVITLLMRVFNKSMLDAQTITQFVH 66 Query: 99 HQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIM 135 + G G CGVY Y+IAE+K + N+ R PL+ ++ Sbjct: 67 NTGEGSCGVYPYDIAELKFSMATNFIRDSGMPLRLVL 103 >gi|208434005|ref|YP_002265671.1| hypothetical protein HPG27_29 [Helicobacter pylori G27] gi|208431934|gb|ACI26805.1| hypothetical protein HPG27_29 [Helicobacter pylori G27] Length = 91 Score = 111 bits (279), Expect = 2e-23, Method: Composition-based stats. Identities = 31/85 (36%), Positives = 51/85 (60%) Query: 53 KVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEI 112 + P + +V++V+D T EFVI L++FF K E AK + +H G G CGVY Y+I Sbjct: 5 NIPTPTMAQVIMVDDPITTAEFVISALRDFFDKSLEEAKALTSSIHRDGEGVCGVYPYDI 64 Query: 113 AEMKVNQVMNYSRQHQYPLQCIMEQ 137 A + V + +R ++PL+ ++E+ Sbjct: 65 ARHRAAWVRDKARALEFPLKLLVEE 89 >gi|254778767|ref|YP_003056872.1| ATP-dependent Clp protease adaptor protein ClpS [Helicobacter pylori B38] gi|254000678|emb|CAX28587.1| ATP-dependent Clp protease adaptor protein ClpS [Helicobacter pylori B38] Length = 91 Score = 110 bits (275), Expect = 7e-23, Method: Composition-based stats. Identities = 31/85 (36%), Positives = 51/85 (60%) Query: 53 KVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEI 112 + P + +V++V+D T EFVI L++FF K E AK + +H G G CGVY Y+I Sbjct: 5 NIPTPTMAQVIMVDDPITTTEFVISALRDFFDKSLEEAKDLTSSIHRDGEGVCGVYPYDI 64 Query: 113 AEMKVNQVMNYSRQHQYPLQCIMEQ 137 A + V + +R ++PL+ ++E+ Sbjct: 65 ARHRAAWVKDKARALEFPLKLLVEE 89 >gi|317011887|gb|ADU82495.1| ATP-dependent Clp protease adapter protein clpS [Helicobacter pylori Lithuania75] Length = 91 Score = 110 bits (275), Expect = 7e-23, Method: Composition-based stats. Identities = 32/85 (37%), Positives = 51/85 (60%) Query: 53 KVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEI 112 + P + +V++V+D T EFVI L++FF K E AK + +H G G CGVY Y+I Sbjct: 5 NIPTPTMAQVIMVDDPITTTEFVISALRDFFDKSLEEAKALTSSIHRDGCGVCGVYPYDI 64 Query: 113 AEMKVNQVMNYSRQHQYPLQCIMEQ 137 A +V V + +R+ PL+ ++E+ Sbjct: 65 ARHRVAWVRDKARELDLPLKLLVEE 89 >gi|148656369|ref|YP_001276574.1| ATP-dependent Clp protease adaptor protein ClpS [Roseiflexus sp. RS-1] gi|148568479|gb|ABQ90624.1| ATP-dependent Clp protease adaptor protein ClpS [Roseiflexus sp. RS-1] Length = 113 Score = 110 bits (275), Expect = 7e-23, Method: Composition-based stats. Identities = 31/111 (27%), Positives = 53/111 (47%) Query: 27 MADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKD 86 MA + + +E ++ + + YRV++ ND+ TPM+FV+ +L F Sbjct: 1 MATHMPAEVSVPLTTTIPTTEYVVVTEDELERPYRVIIENDDVTPMDFVVLILLTIFELG 60 Query: 87 HETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 E + IML+ HH G YE A+ +V + + +R+ YPL +E Sbjct: 61 FEQSVAIMLEAHHNGRAHVVTLPYEEAQRRVYEAHHAAREAGYPLSFYLEP 111 >gi|156743978|ref|YP_001434107.1| ATP-dependent Clp protease adaptor protein ClpS [Roseiflexus castenholzii DSM 13941] gi|156235306|gb|ABU60089.1| ATP-dependent Clp protease adaptor protein ClpS [Roseiflexus castenholzii DSM 13941] Length = 109 Score = 110 bits (275), Expect = 7e-23, Method: Composition-based stats. Identities = 31/90 (34%), Positives = 47/90 (52%), Gaps = 2/90 (2%) Query: 48 VRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGV 107 V ++ P YRV++ ND+ TPM+FV+ VL F E + IML+ HH G Sbjct: 20 VVTEEELERP--YRVIIENDDVTPMDFVVLVLLTIFELGFEQSVAIMLEAHHNGRAHVVT 77 Query: 108 YAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 YE A+ +V + + +R+ YPL +E Sbjct: 78 LPYEEAQRRVYEAHHAAREAGYPLSFYLEP 107 >gi|108562455|ref|YP_626771.1| hypothetical protein HPAG1_0030 [Helicobacter pylori HPAG1] gi|107836228|gb|ABF84097.1| hypothetical protein HPAG1_0030 [Helicobacter pylori HPAG1] Length = 91 Score = 110 bits (275), Expect = 7e-23, Method: Composition-based stats. Identities = 31/85 (36%), Positives = 50/85 (58%) Query: 53 KVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEI 112 + P + +V++V+D T EFVI L++FF K E AK + +H G G CGVY Y+I Sbjct: 5 NIPTPTMAQVIMVDDPITTAEFVISALKDFFDKSLEEAKALTSSIHRDGCGVCGVYPYDI 64 Query: 113 AEMKVNQVMNYSRQHQYPLQCIMEQ 137 A + V + +R+ PL+ ++E+ Sbjct: 65 ARHRAAWVRDKARELDLPLKLLVEE 89 >gi|15644665|ref|NP_206834.1| hypothetical protein HP0032 [Helicobacter pylori 26695] gi|2495581|sp|P56066|CLPS_HELPY RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|2313107|gb|AAD07101.1| conserved hypothetical protein [Helicobacter pylori 26695] Length = 91 Score = 110 bits (275), Expect = 8e-23, Method: Composition-based stats. Identities = 30/85 (35%), Positives = 51/85 (60%) Query: 53 KVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEI 112 + P + +V++V+D T EFVI L++FF K E AK + +H G G CGVY Y+I Sbjct: 5 NIPTPTMAQVIMVDDPITTTEFVISALRDFFDKSLEEAKALTSSIHRDGEGVCGVYPYDI 64 Query: 113 AEMKVNQVMNYSRQHQYPLQCIMEQ 137 A + V + ++ ++PL+ ++E+ Sbjct: 65 ARHRAAWVRDKAKALEFPLKLLVEE 89 >gi|15611099|ref|NP_222750.1| hypothetical protein jhp0028 [Helicobacter pylori J99] gi|12230796|sp|Q9ZN32|CLPS_HELPJ RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|4154533|gb|AAD05612.1| putative [Helicobacter pylori J99] Length = 90 Score = 109 bits (274), Expect = 9e-23, Method: Composition-based stats. Identities = 31/85 (36%), Positives = 55/85 (64%), Gaps = 1/85 (1%) Query: 53 KVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEI 112 ++ P + +V+++ND+ T EF++ L++FF K E A+ +ML +H G G CGVY YEI Sbjct: 5 QIPTPTMSQVIMLNDSITTAEFMVSALRDFFDKPLEEAQKLMLSIHRDGDGVCGVYPYEI 64 Query: 113 AEMKVNQVMNYSRQHQYPLQCIMEQ 137 A K V + +R ++PL+ ++++ Sbjct: 65 AIYKAVCVRDKAR-ARFPLRLMVQE 88 >gi|188526842|ref|YP_001909529.1| hypothetical protein HPSH_00160 [Helicobacter pylori Shi470] gi|188143082|gb|ACD47499.1| hypothetical protein HPSH_00160 [Helicobacter pylori Shi470] gi|308062902|gb|ADO04789.1| ATP-dependent Clp protease adapter protein clpS [Helicobacter pylori Sat464] Length = 91 Score = 109 bits (274), Expect = 1e-22, Method: Composition-based stats. Identities = 30/85 (35%), Positives = 50/85 (58%) Query: 53 KVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEI 112 + P + +V++V+D T EFVI L++FF K E A+ + +H G G CGVY Y+I Sbjct: 5 NIPTPTMAQVIMVDDPITTAEFVISALRDFFDKSLEEAQALTSNIHRDGEGVCGVYPYDI 64 Query: 113 AEMKVNQVMNYSRQHQYPLQCIMEQ 137 A + V + +R+ PL+ ++E+ Sbjct: 65 ARHRAAWVRDKARELDLPLKLLVEE 89 >gi|317008709|gb|ADU79289.1| ATP-dependent Clp protease adapter protein clpS [Helicobacter pylori India7] Length = 91 Score = 109 bits (274), Expect = 1e-22, Method: Composition-based stats. Identities = 32/85 (37%), Positives = 51/85 (60%) Query: 53 KVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEI 112 + P + +V++V+D T EFVI L++FF K E AK + +H G G CGVY Y+I Sbjct: 5 NIPTPTMVQVIMVDDPITTAEFVISALRDFFDKSLEEAKDLTSSIHRDGCGVCGVYPYDI 64 Query: 113 AEMKVNQVMNYSRQHQYPLQCIMEQ 137 A +V V + +R+ PL+ ++E+ Sbjct: 65 ARHRVAWVRDKARELDLPLKLLVEE 89 >gi|308182216|ref|YP_003926343.1| ATP-dependent Clp protease adapter protein clpS [Helicobacter pylori PeCan4] gi|308064401|gb|ADO06293.1| ATP-dependent Clp protease adapter protein clpS [Helicobacter pylori PeCan4] Length = 91 Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats. Identities = 31/85 (36%), Positives = 50/85 (58%) Query: 53 KVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEI 112 + P + +V++V+D T EFVI L++FF K E AK + +H G G CGVY Y+I Sbjct: 5 DIPTPTMAQVIMVDDPITTAEFVISALRDFFDKSLEEAKALTSSIHRDGCGVCGVYPYDI 64 Query: 113 AEMKVNQVMNYSRQHQYPLQCIMEQ 137 A + V + +R+ PL+ ++E+ Sbjct: 65 ARHRAAWVRDKARELDLPLKLLVEE 89 >gi|261838675|gb|ACX98441.1| hypothetical protein KHP_1249 [Helicobacter pylori 51] gi|317179574|dbj|BAJ57362.1| hypothetical protein HPF30_1265 [Helicobacter pylori F30] Length = 91 Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats. Identities = 30/85 (35%), Positives = 50/85 (58%) Query: 53 KVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEI 112 + P + +V++V+D T EFVI L++FF K E A+ + +H G G CGVY Y+I Sbjct: 5 NIPTPTMAQVIMVDDPITTAEFVISALRDFFDKSLEEAQALTSSIHRDGEGVCGVYPYDI 64 Query: 113 AEMKVNQVMNYSRQHQYPLQCIMEQ 137 A + V + +R+ PL+ ++E+ Sbjct: 65 ARHRAAWVRDKARELDLPLKLLVEE 89 >gi|210134229|ref|YP_002300668.1| ATP-dependent clp protease adapter protein ClpS [Helicobacter pylori P12] gi|210132197|gb|ACJ07188.1| ATP-dependent clp protease adapter protein ClpS [Helicobacter pylori P12] Length = 91 Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats. Identities = 31/85 (36%), Positives = 51/85 (60%) Query: 53 KVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEI 112 + +P + +V++V+D T EFVI L++FF K E AK + +H G G CGVY Y+I Sbjct: 5 NIPIPTMAQVIMVDDPITTAEFVISALRDFFDKSLEEAKALTSSIHRDGCGVCGVYPYDI 64 Query: 113 AEMKVNQVMNYSRQHQYPLQCIMEQ 137 A + V + +R+ PL+ ++E+ Sbjct: 65 ARHRAAWVRDKARELDLPLKLLVEE 89 >gi|261840072|gb|ACX99837.1| ATP-dependent Clp protease adaptor protein ClpS [Helicobacter pylori 52] Length = 91 Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats. Identities = 30/85 (35%), Positives = 49/85 (57%) Query: 53 KVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEI 112 + P + +V++V+D T EFVI L++FF K E A+ + +H G G CGVY Y+I Sbjct: 5 NIPTPTMAQVIMVDDPITTAEFVISALRDFFDKSLEEAQALTSSIHRDGEGVCGVYPYDI 64 Query: 113 AEMKVNQVMNYSRQHQYPLQCIMEQ 137 A + V + +R+ PL+ +E+ Sbjct: 65 ARHRAAWVRDKARELDLPLKLWVEE 89 >gi|217031776|ref|ZP_03437280.1| hypothetical protein HPB128_155g89 [Helicobacter pylori B128] gi|298737083|ref|YP_003729613.1| ATP-dependent Clp protease adaptor protein ClpS [Helicobacter pylori B8] gi|216946623|gb|EEC25223.1| hypothetical protein HPB128_155g89 [Helicobacter pylori B128] gi|298356277|emb|CBI67149.1| ATP-dependent Clp protease adaptor protein ClpS [Helicobacter pylori B8] Length = 91 Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats. Identities = 30/85 (35%), Positives = 50/85 (58%) Query: 53 KVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEI 112 + P + +V++V+D T EFVI L++FF K E K + +H G G CGVY Y+I Sbjct: 5 NIPTPTMAQVIMVDDPITTAEFVISALKDFFDKSLEEVKALTSSIHRDGCGVCGVYPYDI 64 Query: 113 AEMKVNQVMNYSRQHQYPLQCIMEQ 137 A + V + +R+ +PL+ ++E+ Sbjct: 65 ARHRAAWVRDKARELDFPLKLLVEE 89 >gi|308061334|gb|ADO03222.1| ATP-dependent Clp protease adapter protein clpS [Helicobacter pylori Cuz20] Length = 91 Score = 109 bits (272), Expect = 1e-22, Method: Composition-based stats. Identities = 30/85 (35%), Positives = 50/85 (58%) Query: 53 KVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEI 112 + P + +V++V+D T EFVI L++FF K E A+ + +H G G CGVY Y+I Sbjct: 5 NIPTPTMAQVIMVDDPITTAEFVISALRDFFDKSLEEAQALTSSIHRDGEGICGVYPYDI 64 Query: 113 AEMKVNQVMNYSRQHQYPLQCIMEQ 137 A + V + +R+ PL+ ++E+ Sbjct: 65 ARHRAAWVRDKARELDLPLKLLVEE 89 >gi|297379256|gb|ADI34143.1| ATP-dependent Clp protease adapter protein clpS [Helicobacter pylori v225d] Length = 91 Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats. Identities = 31/85 (36%), Positives = 51/85 (60%) Query: 53 KVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEI 112 + P + +V++V+D T EFVI L++FF K E A+ + +H G G CGVY Y+I Sbjct: 5 DIPTPTMVQVIMVDDPITTAEFVISALRDFFDKSLEEAQALTSSIHRDGEGVCGVYPYDI 64 Query: 113 AEMKVNQVMNYSRQHQYPLQCIMEQ 137 A +V V + +R+ PL+ ++E+ Sbjct: 65 ARHRVAWVRDKARELDLPLKLLVEE 89 >gi|309791687|ref|ZP_07686179.1| ATP-dependent Clp protease adaptor protein ClpS [Oscillochloris trichoides DG6] gi|308226309|gb|EFO80045.1| ATP-dependent Clp protease adaptor protein ClpS [Oscillochloris trichoides DG6] Length = 107 Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats. Identities = 33/106 (31%), Positives = 51/106 (48%), Gaps = 6/106 (5%) Query: 36 GIAEFDNCLDSEVRF----SSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAK 91 I + D + ++ F + P YRV++ ND+ TPM+FV+ VL+ FF A Sbjct: 2 SIPDPDIRIIPDLTFIVANREDLEKP--YRVIVENDDVTPMDFVVMVLRLFFGLALNDAM 59 Query: 92 CIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +ML HHQG +E A+ +V +R+ YPL +E Sbjct: 60 QVMLTAHHQGRALVTTMPFEEAKERVYSAHTVAREEGYPLTFYLEP 105 >gi|317181079|dbj|BAJ58865.1| hypothetical protein HPF32_1283 [Helicobacter pylori F32] Length = 91 Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats. Identities = 31/85 (36%), Positives = 50/85 (58%) Query: 53 KVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEI 112 + P + +V++V+D T EFVI L++FF K E AK + +H G G CGVY Y+I Sbjct: 5 NIPTPTMAQVIMVDDPITTAEFVISALRDFFDKSLEEAKALTSSIHRDGEGVCGVYPYDI 64 Query: 113 AEMKVNQVMNYSRQHQYPLQCIMEQ 137 A + V + +R+ PL+ ++E+ Sbjct: 65 ARHRAAWVRDKARELDLPLKLLVEE 89 >gi|315587247|gb|ADU41628.1| ATP-dependent Clp protease adaptor protein ClpS [Helicobacter pylori 35A] Length = 91 Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats. Identities = 29/85 (34%), Positives = 50/85 (58%) Query: 53 KVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEI 112 + P + +V++V+D T EFVI L++FF K E A+ + +H G G CGVY Y+I Sbjct: 5 NIPTPTMAQVIMVDDPITTAEFVISALRDFFDKSLEEAQALTSSIHRDGEGVCGVYPYDI 64 Query: 113 AEMKVNQVMNYSRQHQYPLQCIMEQ 137 A + V + +++ PL+ ++E+ Sbjct: 65 ARHRAAWVRDKAKELDLPLRLLVEE 89 >gi|159899721|ref|YP_001545968.1| ATP-dependent Clp protease adaptor protein ClpS [Herpetosiphon aurantiacus ATCC 23779] gi|159892760|gb|ABX05840.1| ATP-dependent Clp protease adaptor protein ClpS [Herpetosiphon aurantiacus ATCC 23779] Length = 113 Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats. Identities = 31/111 (27%), Positives = 52/111 (46%) Query: 27 MADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKD 86 M R + ++ + S + K YRV+L ND+ TPME V+ VL+ F + Sbjct: 1 MNTRRDVATAEPQTTTDVELDFITLSDEELEKPYRVILQNDDITPMEVVVWVLEKVFEQS 60 Query: 87 HETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 E AK IM++ H +G + ++ A +V + +R +PL +E Sbjct: 61 FEQAKRIMIEAHVKGHALVTILPFKEASARVYSAQSRARDMGFPLVLFLEP 111 >gi|317178096|dbj|BAJ55885.1| hypothetical protein HPF16_1288 [Helicobacter pylori F16] Length = 93 Score = 108 bits (271), Expect = 2e-22, Method: Composition-based stats. Identities = 30/85 (35%), Positives = 50/85 (58%) Query: 53 KVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEI 112 + P + +V++V+D T EFVI L++FF K E A+ + +H G G CGVY Y+I Sbjct: 7 NIPTPTMAQVIMVDDPITTAEFVISALRDFFDKSLEEAQALTSSIHRDGEGVCGVYPYDI 66 Query: 113 AEMKVNQVMNYSRQHQYPLQCIMEQ 137 A + V + +R+ PL+ ++E+ Sbjct: 67 ARHRAAWVRDKARELDLPLKLLVEE 91 >gi|317182602|dbj|BAJ60386.1| hypothetical protein HPF57_1312 [Helicobacter pylori F57] Length = 91 Score = 108 bits (271), Expect = 2e-22, Method: Composition-based stats. Identities = 30/85 (35%), Positives = 50/85 (58%) Query: 53 KVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEI 112 + P + +V++V+D T EFVI L++FF K E A+ + +H G G CGVY Y+I Sbjct: 5 NIPTPTMVQVIMVDDPITTAEFVISALRDFFDKSLEEAQALTSSIHRDGEGVCGVYPYDI 64 Query: 113 AEMKVNQVMNYSRQHQYPLQCIMEQ 137 A + V + +R+ PL+ ++E+ Sbjct: 65 ARHRAAWVRDKARELDLPLKLLVEE 89 >gi|207110450|ref|ZP_03244612.1| hypothetical protein HpylH_15368 [Helicobacter pylori HPKX_438_CA4C1] Length = 82 Score = 108 bits (271), Expect = 2e-22, Method: Composition-based stats. Identities = 30/80 (37%), Positives = 47/80 (58%) Query: 53 KVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEI 112 + P + +V++V+D T EFVI L++FF K E AK + +H G G CGVY Y+I Sbjct: 3 NIPTPTMAQVIMVDDPITTAEFVISALRDFFDKSLEEAKALTSSIHRDGCGVCGVYPYDI 62 Query: 113 AEMKVNQVMNYSRQHQYPLQ 132 A + V + +R ++PL+ Sbjct: 63 ARHRAAWVKDKARALEFPLK 82 >gi|217034530|ref|ZP_03439940.1| hypothetical protein HP9810_897g15 [Helicobacter pylori 98-10] gi|216943011|gb|EEC22492.1| hypothetical protein HP9810_897g15 [Helicobacter pylori 98-10] Length = 97 Score = 107 bits (269), Expect = 4e-22, Method: Composition-based stats. Identities = 30/84 (35%), Positives = 50/84 (59%) Query: 54 VRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIA 113 + P + +V++V+D T EFVI L++FF K E A+ + +H G G CGVY Y+IA Sbjct: 12 IPTPTMAQVIMVDDPITTAEFVISALRDFFDKSLEEAQALTSSIHRDGEGVCGVYPYDIA 71 Query: 114 EMKVNQVMNYSRQHQYPLQCIMEQ 137 + V + +R+ PL+ ++E+ Sbjct: 72 RHRAAWVRDKARELDLPLKLLVEE 95 >gi|254456189|ref|ZP_05069618.1| ATP-dependent Clp protease adaptor protein ClpS [Candidatus Pelagibacter sp. HTCC7211] gi|207083191|gb|EDZ60617.1| ATP-dependent Clp protease adaptor protein ClpS [Candidatus Pelagibacter sp. HTCC7211] Length = 95 Score = 102 bits (256), Expect = 1e-20, Method: Composition-based stats. Identities = 32/92 (34%), Positives = 53/92 (57%) Query: 44 LDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIG 103 +++ RF + P LY V+ +ND T +EF+I VL++ F K+H+ A + K+H +G G Sbjct: 1 MNNSFRFETNFNNPILYEVIFLNDQVTTIEFIIRVLKHIFNKEHKHALKLTRKIHEEGYG 60 Query: 104 ECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIM 135 G Y YEIA K + +R +PL+ ++ Sbjct: 61 VVGSYIYEIAGQKELETSLMARDENFPLRVVI 92 >gi|295115732|emb|CBL36579.1| Uncharacterized conserved protein [butyrate-producing bacterium SM4/1] Length = 99 Score = 102 bits (256), Expect = 1e-20, Method: Composition-based stats. Identities = 28/95 (29%), Positives = 53/95 (55%) Query: 43 CLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGI 102 + K++ P LY V++ ND++T M+FV+ +L F+K+HE A +M+ VH+ Sbjct: 4 QTGVKEDTKIKLKKPSLYHVVMHNDDFTTMDFVVEILMTIFHKEHEEAVALMMLVHNIQR 63 Query: 103 GECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 G Y+Y+IA + + +R+ +P + +E+ Sbjct: 64 AVVGTYSYDIARTRAEEAEERAREQGFPFRLSVEE 98 >gi|94272507|ref|ZP_01292136.1| ATP-dependent Clp protease adaptor protein ClpS [delta proteobacterium MLMS-1] gi|93450106|gb|EAT01450.1| ATP-dependent Clp protease adaptor protein ClpS [delta proteobacterium MLMS-1] Length = 58 Score = 93.7 bits (232), Expect = 8e-18, Method: Composition-based stats. Identities = 26/57 (45%), Positives = 37/57 (64%) Query: 82 FFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 F+ D A IM+ VH +G+G GVY + AE KV V N +R+H+YPL+C +EQ+ Sbjct: 2 VFHHDQAAAHRIMMNVHREGVGVAGVYPRDSAETKVAMVHNLARKHEYPLKCSLEQE 58 >gi|261886350|ref|ZP_06010389.1| ATP-dependent Clp protease adaptor protein ClpS [Campylobacter fetus subsp. venerealis str. Azul-94] Length = 76 Score = 91.4 bits (226), Expect = 3e-17, Method: Composition-based stats. Identities = 23/68 (33%), Positives = 35/68 (51%) Query: 48 VRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGV 107 + K P L++V+L+ND T M+FV+ +L + F K A +M+K H G C Sbjct: 9 TKTKIKDFKPNLFKVMLLNDEVTTMDFVVMILIDIFNKSKNEAIELMVKNHQSGRAICRF 68 Query: 108 YAYEIAEM 115 EIA+ Sbjct: 69 STKEIAQT 76 >gi|168702735|ref|ZP_02735012.1| ATP-dependent Clp protease adaptor protein ClpS [Gemmata obscuriglobus UQM 2246] Length = 110 Score = 85.2 bits (210), Expect = 2e-15, Method: Composition-based stats. Identities = 29/108 (26%), Positives = 51/108 (47%), Gaps = 7/108 (6%) Query: 35 KGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIM 94 D + E ++ + P Y V+L ND+ M+FV+ VL+ F E +M Sbjct: 3 NATPTPDVVPEEETETRTRRQPP--YAVVLHNDDTNTMDFVVTVLRKVFGYTVEKCVELM 60 Query: 95 LKVHHQGIGECGVYAYEIAEMKVNQVMNYS-----RQHQYPLQCIMEQ 137 L+ H QG + A E+AE+K +Q+ ++ ++ +PL +E Sbjct: 61 LEAHTQGKVAVWIGALEVAELKADQIKSFGPDPHVTKNGHPLGVTVEP 108 >gi|149192136|ref|ZP_01870358.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio shilonii AK1] gi|148834039|gb|EDL51054.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio shilonii AK1] Length = 45 Score = 82.5 bits (203), Expect = 2e-14, Method: Composition-based stats. Identities = 23/44 (52%), Positives = 31/44 (70%) Query: 94 MLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 ML VH++G CG Y E+AE KV QV YSR++++PL C ME+ Sbjct: 1 MLAVHYEGKAVCGTYTSEVAETKVAQVTMYSRENEHPLLCTMEK 44 >gi|87311880|ref|ZP_01093992.1| hypothetical protein DSM3645_04770 [Blastopirellula marina DSM 3645] gi|87285411|gb|EAQ77333.1| hypothetical protein DSM3645_04770 [Blastopirellula marina DSM 3645] Length = 123 Score = 82.5 bits (203), Expect = 2e-14, Method: Composition-based stats. Identities = 32/120 (26%), Positives = 54/120 (45%), Gaps = 9/120 (7%) Query: 27 MADSRMNKKGIAEFD---NCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFF 83 M + +M K+ A D D++ ++ + Y V+L ND+ +FVI L+ F Sbjct: 1 MGEIQMAKQDAAVADAPATQSDTKTDARNQTKRQPPYVVILHNDDINTFDFVIETLRKVF 60 Query: 84 YKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQY------PLQCIMEQ 137 + E + + VH QG A E+AE+KV+Q+ + Q PL+ +E Sbjct: 61 GYELEKCLQLTINVHKQGRSAIWSGALEVAELKVDQIRSRGADPQMKSKGALPLRVTLEP 120 >gi|86607127|ref|YP_475890.1| ATP-dependent Clp protease adaptor protein ClpS [Synechococcus sp. JA-3-3Ab] gi|86555669|gb|ABD00627.1| ATP-dependent Clp protease adaptor protein ClpS [Synechococcus sp. JA-3-3Ab] Length = 93 Score = 75.6 bits (185), Expect = 2e-12, Method: Composition-based stats. Identities = 30/97 (30%), Positives = 44/97 (45%), Gaps = 7/97 (7%) Query: 43 CLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFF-YKDHETAKCIMLKVHHQG 101 ++ V+ S + +YRVLL ND+ ME+V+ VL A IML+ H+ G Sbjct: 2 ATETLVKPSVTPKHMPMYRVLLHNDDVNTMEYVVQVLVKVIPSMLPPQATEIMLEAHNNG 61 Query: 102 IGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 + V E AE Q+ RQH L +E + Sbjct: 62 VAVVIVVPREHAEFYCEQL----RQHG--LTSSIEPE 92 >gi|302761288|ref|XP_002964066.1| hypothetical protein SELMODRAFT_142341 [Selaginella moellendorffii] gi|302787370|ref|XP_002975455.1| hypothetical protein SELMODRAFT_150531 [Selaginella moellendorffii] gi|300157029|gb|EFJ23656.1| hypothetical protein SELMODRAFT_150531 [Selaginella moellendorffii] gi|300167795|gb|EFJ34399.1| hypothetical protein SELMODRAFT_142341 [Selaginella moellendorffii] Length = 164 Score = 74.8 bits (183), Expect = 3e-12, Method: Composition-based stats. Identities = 28/96 (29%), Positives = 42/96 (43%), Gaps = 7/96 (7%) Query: 43 CLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFF-YKDHETAKCIMLKVHHQG 101 +SE K ++ YRV+L NDN+ E+V+ VL + A IM + HH G Sbjct: 69 GRESEFDLRKKKKMAPPYRVILHNDNFNRREYVVQVLMKVIPGMTLDNAVNIMQEAHHNG 128 Query: 102 IGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 + V + E AE Q+ R + L +E Sbjct: 129 LSVVIVCSQEDAEEHCTQL----RANG--LLSSIEP 158 >gi|224419091|ref|ZP_03657097.1| ATP-dependent Clp protease, adaptor protein ClpS [Helicobacter canadensis MIT 98-5491] Length = 58 Score = 74.8 bits (183), Expect = 3e-12, Method: Composition-based stats. Identities = 20/55 (36%), Positives = 34/55 (61%) Query: 41 DNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIML 95 N +++ K++ P Y+V+L+ND+YT +FVI +LQ F+K E + +ML Sbjct: 4 QNQIENATETLEKLQEPIRYKVILLNDDYTTQDFVIEILQKVFHKGFEESLNLML 58 >gi|108803856|ref|YP_643793.1| ATP-dependent Clp protease adaptor protein ClpS [Rubrobacter xylanophilus DSM 9941] gi|108765099|gb|ABG03981.1| ATP-dependent Clp protease adaptor protein ClpS [Rubrobacter xylanophilus DSM 9941] Length = 107 Score = 74.8 bits (183), Expect = 3e-12, Method: Composition-based stats. Identities = 20/74 (27%), Positives = 29/74 (39%), Gaps = 1/74 (1%) Query: 42 NCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFF-YKDHETAKCIMLKVHHQ 100 + YRV+L ND++TPM+ V+ L A IML+ H + Sbjct: 15 TKTAPARKTRRAPSREPRYRVILHNDDWTPMDHVVAALMKVVPRLSLRRAVSIMLEAHTK 74 Query: 101 GIGECGVYAYEIAE 114 G E+AE Sbjct: 75 GQAVVTRCHRELAE 88 >gi|86608169|ref|YP_476931.1| ATP-dependent Clp protease adaptor protein ClpS [Synechococcus sp. JA-2-3B'a(2-13)] gi|86556711|gb|ABD01668.1| ATP-dependent Clp protease adaptor protein ClpS [Synechococcus sp. JA-2-3B'a(2-13)] Length = 93 Score = 74.8 bits (183), Expect = 3e-12, Method: Composition-based stats. Identities = 31/97 (31%), Positives = 44/97 (45%), Gaps = 7/97 (7%) Query: 43 CLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFF-YKDHETAKCIMLKVHHQG 101 ++ V+ S + +YRVLL ND+ ME+V+ VL A IML+ HH G Sbjct: 2 ATETLVKPSVTPKHMPMYRVLLHNDDVNTMEYVVQVLVKVIPAMMPPQATEIMLEAHHNG 61 Query: 102 IGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 + V E AE Q+ RQH L +E + Sbjct: 62 VAVVIVVPREHAEFYCEQL----RQHG--LTSSIEPE 92 >gi|209523998|ref|ZP_03272550.1| ATP-dependent Clp protease adaptor protein ClpS [Arthrospira maxima CS-328] gi|209495670|gb|EDZ95973.1| ATP-dependent Clp protease adaptor protein ClpS [Arthrospira maxima CS-328] Length = 117 Score = 73.7 bits (180), Expect = 8e-12, Method: Composition-based stats. Identities = 25/87 (28%), Positives = 37/87 (42%), Gaps = 1/87 (1%) Query: 29 DSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQ-NFFYKDH 87 N + + + S+ ++ YRVLL ND+Y PME+V+ VL Sbjct: 12 PDHCNFVNGGDGSVSTQTVEKTSTNRKLAPRYRVLLHNDDYNPMEYVVQVLMSTVPGLTQ 71 Query: 88 ETAKCIMLKVHHQGIGECGVYAYEIAE 114 A IM++ H G+ A E AE Sbjct: 72 PQAVSIMMEAHTNGLALVITCALEHAE 98 >gi|298245523|ref|ZP_06969329.1| ATP-dependent Clp protease adaptor protein ClpS [Ktedonobacter racemifer DSM 44963] gi|297553004|gb|EFH86869.1| ATP-dependent Clp protease adaptor protein ClpS [Ktedonobacter racemifer DSM 44963] Length = 102 Score = 73.3 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 25/97 (25%), Positives = 39/97 (40%), Gaps = 7/97 (7%) Query: 43 CLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIH-VLQNFFYKDHETAKCIMLKVHHQG 101 + E + + LY+V+L ND+Y M V+ +L+ + A IML H G Sbjct: 12 EIRPEEVVRQRSSLLPLYKVILFNDDYNDMLHVVAALLETVNTLTMQEATHIMLTAHLNG 71 Query: 102 IGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 V +E+AE R Y L +E + Sbjct: 72 NAIVIVCPHELAE------HYQERLLGYALTVTIEPE 102 >gi|284929541|ref|YP_003422063.1| hypothetical protein UCYN_10070 [cyanobacterium UCYN-A] gi|284809985|gb|ADB95682.1| uncharacterized conserved protein [cyanobacterium UCYN-A] Length = 97 Score = 72.9 bits (178), Expect = 1e-11, Method: Composition-based stats. Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 1/76 (1%) Query: 40 FDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVL-QNFFYKDHETAKCIMLKVH 98 D + S+ + Y+VLL ND++ PM++V+ +L Q A IM++ H Sbjct: 3 TDVIEKISLNTSTTKKPVPRYKVLLHNDDFNPMDYVVQILMQTISGMTRPQAAEIMMEAH 62 Query: 99 HQGIGECGVYAYEIAE 114 G A+E AE Sbjct: 63 ISGTALVITCAFEPAE 78 >gi|224419090|ref|ZP_03657096.1| hypothetical protein HcanM9_07438 [Helicobacter canadensis MIT 98-5491] Length = 41 Score = 72.9 bits (178), Expect = 1e-11, Method: Composition-based stats. Identities = 19/40 (47%), Positives = 28/40 (70%) Query: 98 HHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 HH G G CG+Y Y+IAE K QV +++ Q+PL+ I+E+ Sbjct: 1 HHNGRGMCGIYPYDIAETKAMQVRKMAKEKQFPLRAILEK 40 >gi|294460817|gb|ADE75982.1| unknown [Picea sitchensis] Length = 158 Score = 71.8 bits (175), Expect = 3e-11, Method: Composition-based stats. Identities = 30/122 (24%), Positives = 46/122 (37%), Gaps = 7/122 (5%) Query: 17 GILALMSFIFMADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVI 76 + S + + I + +SE + YRVLL NDNY E+V+ Sbjct: 38 SAIRSTSPGGKGGGLLERPTIEKTTPGRESEFDLRKSRKTSPPYRVLLHNDNYNKREYVV 97 Query: 77 HVLQNFF-YKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIM 135 VL +TA IM + H+ G+ + A AE Q+ R + L + Sbjct: 98 QVLMKVIPGMTLDTAVNIMQEAHYNGLAVVIICAQVDAEEHCTQL----RGNG--LLSSI 151 Query: 136 EQ 137 E Sbjct: 152 EP 153 >gi|224111728|ref|XP_002315955.1| predicted protein [Populus trichocarpa] gi|222864995|gb|EEF02126.1| predicted protein [Populus trichocarpa] Length = 162 Score = 71.8 bits (175), Expect = 3e-11, Method: Composition-based stats. Identities = 27/101 (26%), Positives = 42/101 (41%), Gaps = 9/101 (8%) Query: 38 AEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFF-YKDHETAKCIMLK 96 + ++R S K+ P YRV+L NDNY E+V+ VL + A IM + Sbjct: 65 TTPGRESEFDLRKSKKMAPP--YRVILHNDNYNKREYVVQVLMKVIPGMTLDNAVNIMQE 122 Query: 97 VHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 H+ G+ + AE Q+ R + L +E Sbjct: 123 AHYNGLSVVIICTQADAEEHCMQL----RGNG--LLSSIEP 157 >gi|37520315|ref|NP_923692.1| ATP-dependent Clp protease adaptor protein ClpS [Gloeobacter violaceus PCC 7421] gi|39930962|sp|Q7NML9|CLPS_GLOVI RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|35211308|dbj|BAC88687.1| gsl0746 [Gloeobacter violaceus PCC 7421] Length = 93 Score = 71.4 bits (174), Expect = 4e-11, Method: Composition-based stats. Identities = 27/73 (36%), Positives = 39/73 (53%), Gaps = 1/73 (1%) Query: 43 CLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQN-FFYKDHETAKCIMLKVHHQG 101 ++ R S + + LY+VLL ND++TPM +VI VL A+ IML+ H+ G Sbjct: 2 STETLERKSVQRKPMPLYKVLLHNDDHTPMNYVIEVLMKTIPKMQPSKARKIMLEAHNGG 61 Query: 102 IGECGVYAYEIAE 114 + V A E AE Sbjct: 62 VAVVIVCALEHAE 74 >gi|121489819|emb|CAK19331.1| putative adaptor protein ClpS [Physcomitrella patens] Length = 155 Score = 71.4 bits (174), Expect = 4e-11, Method: Composition-based stats. Identities = 27/107 (25%), Positives = 45/107 (42%), Gaps = 7/107 (6%) Query: 32 MNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQN-FFYKDHETA 90 +++ I + +SE K ++ YRV+L NDN+ E+V+ VL + A Sbjct: 52 LDRPTIDKPTPGRESEFDLKKKKKISPPYRVMLHNDNFNKREYVVQVLMKAIPGMTVDIA 111 Query: 91 KCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +M + H G+ V E AE Q+ R + L +E Sbjct: 112 VNVMNEAHINGLAVVIVCPQEDAEDYCMQL----RTNG--LLSSIEP 152 >gi|114214762|emb|CAK51544.1| ATP-dependent Clp protease adaptor protein ClpS [Celosia cristata] Length = 134 Score = 71.4 bits (174), Expect = 4e-11, Method: Composition-based stats. Identities = 26/94 (27%), Positives = 38/94 (40%), Gaps = 5/94 (5%) Query: 31 RMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETA 90 + E D EV V + + VL+ ND M +V+ V Q F E A Sbjct: 37 HASSPAPVEVDRPTGEEV-----VEPDRPWIVLVWNDPINLMSYVVFVFQKLFGYSREKA 91 Query: 91 KCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYS 124 +ML VHH+G E AE+ V ++ + Sbjct: 92 TSLMLDVHHKGRAVVSSGTREKAELDVFRLHEHG 125 >gi|225423913|ref|XP_002281884.1| PREDICTED: hypothetical protein [Vitis vinifera] gi|147853628|emb|CAN80233.1| hypothetical protein VITISV_037190 [Vitis vinifera] Length = 157 Score = 71.0 bits (173), Expect = 5e-11, Method: Composition-based stats. Identities = 29/124 (23%), Positives = 50/124 (40%), Gaps = 7/124 (5%) Query: 15 RDGILALMSFIFMADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEF 74 R ++A+ + + + I + +SE ++ YRV+L NDNY E+ Sbjct: 35 RSFLMAISASGPGKGGLLERPVIEKVTPGRESEFDLRKSRKIAPPYRVILHNDNYNKREY 94 Query: 75 VIHVLQNFF-YKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQC 133 V+ VL + A IM + H+ G+ + A AE Q+ R + L Sbjct: 95 VVQVLMKVIPGMTLDNAVNIMQEAHYNGLSVVIICAQADAEDHCMQL----RGNG--LLS 148 Query: 134 IMEQ 137 +E Sbjct: 149 SIEP 152 >gi|320103498|ref|YP_004179089.1| ATP-dependent Clp protease adaptor protein ClpS [Isosphaera pallida ATCC 43644] gi|319750780|gb|ADV62540.1| ATP-dependent Clp protease adaptor protein ClpS [Isosphaera pallida ATCC 43644] Length = 124 Score = 70.6 bits (172), Expect = 7e-11, Method: Composition-based stats. Identities = 27/117 (23%), Positives = 47/117 (40%), Gaps = 11/117 (9%) Query: 29 DSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHE 88 + + + R +K R Y V+++ND E+VI +L F Sbjct: 9 PDDLGAGTTVTTQSAPKTSTRGLTKTRQLPRYHVIILNDEEHTFEYVIDLLTKVFRHSRP 68 Query: 89 TAKCIMLKVHHQGIGECGVYAYEIAEMKVNQV--------MNYSRQHQYPLQCIMEQ 137 TA+ + ++H +G+ E+AE+K +QV M S+ L C +E Sbjct: 69 TAEALTWQIHTRGMAIVYTTHKELAELKRDQVLSWGPDPRMEISKTS---LACYIEP 122 >gi|168014848|ref|XP_001759963.1| predicted protein [Physcomitrella patens subsp. patens] gi|162688713|gb|EDQ75088.1| predicted protein [Physcomitrella patens subsp. patens] Length = 112 Score = 70.2 bits (171), Expect = 9e-11, Method: Composition-based stats. Identities = 29/107 (27%), Positives = 46/107 (42%), Gaps = 7/107 (6%) Query: 32 MNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHV-LQNFFYKDHETA 90 M++ I + +SE K ++ YRV+L NDN+ E+V+ V L+ + A Sbjct: 11 MDRPTIDKPTPGRESEFDLKKKKKMSPPYRVMLHNDNFNKREYVVQVLLKAIPGMTVDIA 70 Query: 91 KCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +M + H GI V E AE Q+ R + L +E Sbjct: 71 VNVMNEAHINGIAVVIVCPQEDAEDYCMQL----RTNG--LLSSIEP 111 >gi|291571937|dbj|BAI94209.1| ATP-dependent Clp protease adaptor protein ClpS [Arthrospira platensis NIES-39] Length = 117 Score = 69.5 bits (169), Expect = 1e-10, Method: Composition-based stats. Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 1/78 (1%) Query: 38 AEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQ-NFFYKDHETAKCIMLK 96 + + + S+ ++ YRVLL ND++ PME+V+ VL A IM++ Sbjct: 21 GDGSVSTQTVEKTSTNRKLAPRYRVLLHNDDHNPMEYVVQVLMSTVPGLTQPQAVSIMME 80 Query: 97 VHHQGIGECGVYAYEIAE 114 H G+ A E AE Sbjct: 81 AHTNGLALVITCALEHAE 98 >gi|242081547|ref|XP_002445542.1| hypothetical protein SORBIDRAFT_07g021160 [Sorghum bicolor] gi|241941892|gb|EES15037.1| hypothetical protein SORBIDRAFT_07g021160 [Sorghum bicolor] Length = 159 Score = 69.5 bits (169), Expect = 1e-10, Method: Composition-based stats. Identities = 29/121 (23%), Positives = 49/121 (40%), Gaps = 10/121 (8%) Query: 19 LALMSFIFMADSRMNKK-GIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIH 77 +AL + +++ + +V+ S K+ P YRV+L NDNY E+V+ Sbjct: 42 MALSAAAPGKGGVLDRPVEKTTPGRQSEFDVKKSRKMSPP--YRVILHNDNYNRREYVVQ 99 Query: 78 VLQNFF-YKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIME 136 VL + A IM + H G+ V + AE + R + L+ +E Sbjct: 100 VLMKVIPGMTVDNAVNIMQEAHVNGLSVVIVCSQSEAEEHCTSL----RGNG--LRSSIE 153 Query: 137 Q 137 Sbjct: 154 P 154 >gi|56750848|ref|YP_171549.1| ATP-dependent Clp protease adaptor protein ClpS [Synechococcus elongatus PCC 6301] gi|81596329|sp|Q5N3U1|CLPS_SYNP6 RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|56685807|dbj|BAD79029.1| hypothetical protein [Synechococcus elongatus PCC 6301] Length = 91 Score = 69.5 bits (169), Expect = 1e-10, Method: Composition-based stats. Identities = 27/90 (30%), Positives = 40/90 (44%), Gaps = 3/90 (3%) Query: 41 DNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVL-QNFFYKDHETAKCIMLKVHH 99 + E K+ YRVLL ND++ PME+V+ VL Q A IM++ H Sbjct: 4 ETIQKPETTTKRKIAP--RYRVLLHNDDFNPMEYVVMVLMQTVPSLTQPQAVDIMMEAHT 61 Query: 100 QGIGECGVYAYEIAEMKVNQVMNYSRQHQY 129 G G E AE Q+ ++ + Q+ Sbjct: 62 NGTGLVITCDIEPAEFYCEQLKSHGLEQQH 91 >gi|18409086|ref|NP_564937.1| unknown protein [Arabidopsis thaliana] gi|5734712|gb|AAD49977.1|AC008075_10 ESTs gb|T41781 and gb|AA586096 come from this gene [Arabidopsis thaliana] gi|12484207|gb|AAG54002.1|AF336921_1 unknown protein [Arabidopsis thaliana] gi|15010628|gb|AAK73973.1| At1g68660/F24J5_4 [Arabidopsis thaliana] gi|21464569|gb|AAM52239.1| At1g68660/F24J5_4 [Arabidopsis thaliana] gi|21553930|gb|AAM63011.1| unknown [Arabidopsis thaliana] gi|332196703|gb|AEE34824.1| ATP-dependent Clp protease adaptor protein ClpS [Arabidopsis thaliana] Length = 159 Score = 69.5 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 28/101 (27%), Positives = 42/101 (41%), Gaps = 9/101 (8%) Query: 38 AEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFF-YKDHETAKCIMLK 96 + ++R S K+ P YRV+L NDN+ E+V+ VL + A IM + Sbjct: 62 TTPGRESEFDLRKSKKIAPP--YRVILHNDNFNKREYVVQVLMKVIPGMTVDNAVNIMQE 119 Query: 97 VHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 H G+ V A AE Q+ R + L +E Sbjct: 120 AHINGLAVVIVCAQADAEQHCMQL----RGNG--LLSSVEP 154 >gi|255576515|ref|XP_002529149.1| ATP-dependent Clp protease adaptor protein clpS, putative [Ricinus communis] gi|223531428|gb|EEF33262.1| ATP-dependent Clp protease adaptor protein clpS, putative [Ricinus communis] Length = 120 Score = 69.5 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 28/101 (27%), Positives = 42/101 (41%), Gaps = 9/101 (8%) Query: 38 AEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFF-YKDHETAKCIMLK 96 + ++R S K P YRV+L NDNY E+V+ VL + A IM + Sbjct: 23 TTPGRESEFDLRKSRKTAPP--YRVILHNDNYNKREYVVQVLMKVIPGMTLDNAVNIMQE 80 Query: 97 VHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 H+ G+ + A AE Q+ R + L +E Sbjct: 81 AHYNGLSVVIICAQADAEDHCMQL----RGNG--LLSSIEP 115 >gi|269926486|ref|YP_003323109.1| ATP-dependent Clp protease adaptor protein ClpS [Thermobaculum terrenum ATCC BAA-798] gi|269790146|gb|ACZ42287.1| ATP-dependent Clp protease adaptor protein ClpS [Thermobaculum terrenum ATCC BAA-798] Length = 101 Score = 69.5 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 6/78 (7%) Query: 60 YRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQ 119 ++V+L ND+ M++V+ VL E A +ML+ HH G A E AE+ ++ Sbjct: 30 WKVILWNDDVHSMDYVVLVLMRCLGMSLEKATQVMLEAHHNGQSVAWAGAKETAELYQDR 89 Query: 120 VMNYSRQHQYPLQCIMEQ 137 ++++ L +E+ Sbjct: 90 LLSFG------LTATIEK 101 >gi|171910264|ref|ZP_02925734.1| ATP-dependent Clp protease adaptor protein ClpS [Verrucomicrobium spinosum DSM 4136] Length = 98 Score = 69.1 bits (168), Expect = 2e-10, Method: Composition-based stats. Identities = 28/104 (26%), Positives = 46/104 (44%), Gaps = 10/104 (9%) Query: 35 KGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIM 94 IA D E S + P + V++ ND M +V HV++ F + A+ +M Sbjct: 2 PSIATPDKQTLVETDPSVALDSP--WHVIIHNDPVNLMSYVAHVIRKIFGYPDKEAQRLM 59 Query: 95 LKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQ-HQYPLQCIMEQ 137 L+VH +G + E AE +Y R+ H + L +E+ Sbjct: 60 LQVHQEGRSQVWTGRREKAE-------HYVRELHGHQLLATLEK 96 >gi|297841589|ref|XP_002888676.1| hypothetical protein ARALYDRAFT_894639 [Arabidopsis lyrata subsp. lyrata] gi|297334517|gb|EFH64935.1| hypothetical protein ARALYDRAFT_894639 [Arabidopsis lyrata subsp. lyrata] Length = 159 Score = 69.1 bits (168), Expect = 2e-10, Method: Composition-based stats. Identities = 31/128 (24%), Positives = 52/128 (40%), Gaps = 9/128 (7%) Query: 13 VKRDGILALMSFIFMADSR--MNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYT 70 V R ++ L ++ + ++K I + +SE ++ YRV+L NDN+ Sbjct: 33 VNRGVLMTLSTYAALGKGGGVLDKPIIEKTTPGRESEFDLRKSKKMAPPYRVILHNDNFN 92 Query: 71 PMEFVIHVLQNFF-YKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQY 129 E+V+ VL + A IM + H G+ V A AE Q+ R + Sbjct: 93 KREYVVQVLMKVIPGMTVDNAVNIMQEAHINGLAVVIVCAQADAEQHCMQL----RGNG- 147 Query: 130 PLQCIMEQ 137 L +E Sbjct: 148 -LLSSVEP 154 >gi|223943781|gb|ACN25974.1| unknown [Zea mays] Length = 119 Score = 69.1 bits (168), Expect = 2e-10, Method: Composition-based stats. Identities = 28/121 (23%), Positives = 45/121 (37%), Gaps = 9/121 (7%) Query: 18 ILALMSFIFMADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIH 77 L+ + + +V+ S K+ P YRV+L NDNY E+V+ Sbjct: 2 ALSAAAPGKGGGVLDRPVEKTTPGRQSEFDVKKSRKMSPP--YRVILHNDNYNRREYVVK 59 Query: 78 VLQNFF-YKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIME 136 VL + A IM + H G+ V + AE + R + L+ +E Sbjct: 60 VLMKVIPGMTVDNAVNIMQEAHVNGLSVVIVCSQSEAEEHCTSL----RGNG--LRSSIE 113 Query: 137 Q 137 Sbjct: 114 P 114 >gi|226506038|ref|NP_001150373.1| ATP-dependent Clp protease adaptor protein ClpS containing protein [Zea mays] gi|194701596|gb|ACF84882.1| unknown [Zea mays] gi|195610704|gb|ACG27182.1| ATP-dependent Clp protease adaptor protein ClpS containing protein [Zea mays] gi|195638746|gb|ACG38841.1| ATP-dependent Clp protease adaptor protein ClpS containing protein [Zea mays] Length = 160 Score = 69.1 bits (168), Expect = 2e-10, Method: Composition-based stats. Identities = 28/121 (23%), Positives = 45/121 (37%), Gaps = 9/121 (7%) Query: 18 ILALMSFIFMADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIH 77 L+ + + +V+ S K+ P YRV+L NDNY E+V+ Sbjct: 43 ALSAAAPGKGGGVLDRPVEKTTPGRQSEFDVKKSRKMSPP--YRVILHNDNYNRREYVVK 100 Query: 78 VLQNFF-YKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIME 136 VL + A IM + H G+ V + AE + R + L+ +E Sbjct: 101 VLMKVIPGMTVDNAVNIMQEAHVNGLSVVIVCSQSEAEEHCTSL----RGNG--LRSSIE 154 Query: 137 Q 137 Sbjct: 155 P 155 >gi|255627599|gb|ACU14144.1| unknown [Glycine max] Length = 160 Score = 69.1 bits (168), Expect = 2e-10, Method: Composition-based stats. Identities = 29/102 (28%), Positives = 42/102 (41%), Gaps = 9/102 (8%) Query: 37 IAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFF-YKDHETAKCIML 95 + ++R S K P YRVLL NDN+ E+V+ VL + A IM Sbjct: 61 TTSPGRESEFDLRKSRKTSPP--YRVLLHNDNFNKREYVVQVLMKVIPGMTIDNAVNIMQ 118 Query: 96 KVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 + H+ G+ V A AE Q+ R + L +E Sbjct: 119 EAHYNGLAVVIVCAQVDAEDHCMQL----RGNG--LLSSIEP 154 >gi|224099343|ref|XP_002311446.1| predicted protein [Populus trichocarpa] gi|118481362|gb|ABK92624.1| unknown [Populus trichocarpa] gi|222851266|gb|EEE88813.1| predicted protein [Populus trichocarpa] Length = 158 Score = 69.1 bits (168), Expect = 2e-10, Method: Composition-based stats. Identities = 32/129 (24%), Positives = 54/129 (41%), Gaps = 12/129 (9%) Query: 13 VKRDGILALMSFIFMADSRMNKKGIAE---FDNCLDSEVRFSSKVRVPKLYRVLLVNDNY 69 R ++A+ + + +K + E + ++R S K+ P YRV+L NDNY Sbjct: 33 ANRGILMAISTTCSGKGGGLLEKPVIERTTPGRESEFDLRKSKKMAPP--YRVMLHNDNY 90 Query: 70 TPMEFVIHVLQNFF-YKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQ 128 E+V+ VL + A IM + H+ G+ + A AE Q+ R + Sbjct: 91 NKREYVVQVLMKVIPGMTLDNAVNIMQEAHYNGLSVVIICAQADAEEHCMQL----RGNG 146 Query: 129 YPLQCIMEQ 137 L +E Sbjct: 147 --LLSSIEP 153 >gi|162449014|ref|YP_001611381.1| hypothetical protein sce0744 [Sorangium cellulosum 'So ce 56'] gi|161159596|emb|CAN90901.1| hypothetical protein predicted by Glimmer/Critica [Sorangium cellulosum 'So ce 56'] Length = 285 Score = 68.7 bits (167), Expect = 2e-10, Method: Composition-based stats. Identities = 22/77 (28%), Positives = 34/77 (44%) Query: 59 LYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVN 118 L V+ ND+ T ME V +L + F D A ML VH G G Y + A + Sbjct: 177 LVEVVFWNDDVTKMEAVQRLLVDCFGMDEVEATHFMLTVHFAGSAAAGPYRPDTAAALLA 236 Query: 119 QVMNYSRQHQYPLQCIM 135 + +R+ P++ + Sbjct: 237 RATQVARERGMPIRITL 253 >gi|147805878|emb|CAN78258.1| hypothetical protein VITISV_026645 [Vitis vinifera] Length = 135 Score = 68.7 bits (167), Expect = 3e-10, Method: Composition-based stats. Identities = 30/99 (30%), Positives = 43/99 (43%), Gaps = 9/99 (9%) Query: 40 FDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFF-YKDHETAKCIMLKVH 98 + ++R S K+ P YRVLL NDNY E+V+ VL + A IM + H Sbjct: 40 PGRESEFDLRKSRKMSPP--YRVLLHNDNYNKREYVVQVLMKVIPGMTLDNAVNIMQEAH 97 Query: 99 HQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 H G+ + A AE Q+ R + L +E Sbjct: 98 HNGMSVVIICAQVDAEXHCMQL----RGNG--LLSSIEP 130 >gi|81299501|ref|YP_399709.1| ATP-dependent Clp protease adaptor protein ClpS [Synechococcus elongatus PCC 7942] gi|123728228|sp|Q31QE7|CLPS_SYNE7 RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|81168382|gb|ABB56722.1| conserved hypothetical protein [Synechococcus elongatus PCC 7942] Length = 95 Score = 68.7 bits (167), Expect = 3e-10, Method: Composition-based stats. Identities = 25/75 (33%), Positives = 33/75 (44%), Gaps = 3/75 (4%) Query: 41 DNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVL-QNFFYKDHETAKCIMLKVHH 99 + E K+ YRVLL ND++ PME+V+ VL Q A IM++ H Sbjct: 4 ETIQKPETTTKRKIAP--RYRVLLHNDDFNPMEYVVMVLMQTVPSLTQPQAVDIMMEAHT 61 Query: 100 QGIGECGVYAYEIAE 114 G G E AE Sbjct: 62 NGTGLVITCDIEPAE 76 >gi|168011584|ref|XP_001758483.1| predicted protein [Physcomitrella patens subsp. patens] gi|162690518|gb|EDQ76885.1| predicted protein [Physcomitrella patens subsp. patens] Length = 106 Score = 68.3 bits (166), Expect = 3e-10, Method: Composition-based stats. Identities = 27/107 (25%), Positives = 45/107 (42%), Gaps = 7/107 (6%) Query: 32 MNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQN-FFYKDHETA 90 +++ I + +SE K ++ YRV+L NDN+ E+V+ VL + A Sbjct: 6 LDRPTIDKPTPGRESEFDLKKKKKMSPPYRVMLHNDNFNKREYVVQVLMKAIPGMTVDIA 65 Query: 91 KCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +M + H G+ V E AE Q+ R + L +E Sbjct: 66 VNVMNEAHINGLAVVIVCPQEDAEDYCMQL----RTNG--LLSSIEP 106 >gi|159904162|ref|YP_001551506.1| ATP-dependent Clp protease adaptor protein ClpS [Prochlorococcus marinus str. MIT 9211] gi|159889338|gb|ABX09552.1| Conserved hypothetical protein [Prochlorococcus marinus str. MIT 9211] Length = 116 Score = 67.9 bits (165), Expect = 4e-10, Method: Composition-based stats. Identities = 22/97 (22%), Positives = 42/97 (43%), Gaps = 1/97 (1%) Query: 19 LALMSFIFMADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHV 78 ++L+ + ++ M + + E + + Y+VLL ND M++V+ Sbjct: 1 MSLVDWNYLPTGIMVEATGSSPGGATVIEKQSELVRKRSPRYKVLLHNDPVNSMDYVVTT 60 Query: 79 LQNFF-YKDHETAKCIMLKVHHQGIGECGVYAYEIAE 114 L+ + A +ML+ H+ G+G V E AE Sbjct: 61 LRQVVPQLSEQDALAVMLEAHNTGVGLVIVCDLEPAE 97 >gi|125603506|gb|EAZ42831.1| hypothetical protein OsJ_27419 [Oryza sativa Japonica Group] Length = 160 Score = 67.9 bits (165), Expect = 4e-10, Method: Composition-based stats. Identities = 28/99 (28%), Positives = 42/99 (42%), Gaps = 9/99 (9%) Query: 40 FDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFF-YKDHETAKCIMLKVH 98 + +VR S K+ P YRVLL NDNY E+V+ VL + A IM + H Sbjct: 65 PGRQSEFDVRKSRKMTPP--YRVLLHNDNYNRREYVVQVLMKVIPGMTVDNAVNIMQEAH 122 Query: 99 HQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 G+ + + AE + R + L+ +E Sbjct: 123 VNGLSVVIICSQSEAEEHCTSL----RGNG--LRSSIEP 155 >gi|307150896|ref|YP_003886280.1| ATP-dependent Clp protease adaptor protein ClpS [Cyanothece sp. PCC 7822] gi|306981124|gb|ADN13005.1| ATP-dependent Clp protease adaptor protein ClpS [Cyanothece sp. PCC 7822] Length = 99 Score = 67.9 bits (165), Expect = 5e-10, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 31/78 (39%), Gaps = 1/78 (1%) Query: 38 AEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQN-FFYKDHETAKCIMLK 96 + + S+ + YRVLL ND++ ME+V+ L A IM++ Sbjct: 3 TSTSTQVIEKSSTSTVRKPAPRYRVLLHNDDFNSMEYVVQTLMKTVAGMTQPQAVNIMME 62 Query: 97 VHHQGIGECGVYAYEIAE 114 H G+ E AE Sbjct: 63 AHTNGMALVITCTLEHAE 80 >gi|87301880|ref|ZP_01084714.1| hypothetical protein WH5701_01105 [Synechococcus sp. WH 5701] gi|87283448|gb|EAQ75403.1| hypothetical protein WH5701_01105 [Synechococcus sp. WH 5701] Length = 109 Score = 67.9 bits (165), Expect = 5e-10, Method: Composition-based stats. Identities = 28/114 (24%), Positives = 45/114 (39%), Gaps = 8/114 (7%) Query: 27 MADSRMNKKGIAEFDNCLDSEVRFSSKVRVP-KLYRVLLVNDNYTPMEFVIHVLQNFF-Y 84 M+D+ + + +VR P YRVLL ND ME+V+ L+ Sbjct: 1 MSDTIRATETPTRSPGGAAVIEKEVQRVRKPSPRYRVLLHNDPVNSMEYVVTTLRQVVPS 60 Query: 85 KDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 + A +ML+ H+ G+G V E AE ++ L +E + Sbjct: 61 LSEQDAIAVMLEAHNTGVGLVIVCDLEPAE--FYSETLKAKG----LSSTIEPE 108 >gi|218438615|ref|YP_002376944.1| ATP-dependent Clp protease adaptor protein ClpS [Cyanothece sp. PCC 7424] gi|218171343|gb|ACK70076.1| ATP-dependent Clp protease adaptor protein ClpS [Cyanothece sp. PCC 7424] Length = 97 Score = 67.5 bits (164), Expect = 5e-10, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 26/61 (42%), Gaps = 1/61 (1%) Query: 55 RVPKLYRVLLVNDNYTPMEFVIHVLQN-FFYKDHETAKCIMLKVHHQGIGECGVYAYEIA 113 + YRVLL ND++ ME+V+ L A IM++ H G E A Sbjct: 18 KPAPRYRVLLHNDDFNSMEYVVQTLMKTVAGMTQPQAVNIMMEAHTNGTALVITCTLEHA 77 Query: 114 E 114 E Sbjct: 78 E 78 >gi|115476544|ref|NP_001061868.1| Os08g0432500 [Oryza sativa Japonica Group] gi|37805936|dbj|BAC99353.1| unknown protein [Oryza sativa Japonica Group] gi|42409470|dbj|BAD09826.1| unknown protein [Oryza sativa Japonica Group] gi|113623837|dbj|BAF23782.1| Os08g0432500 [Oryza sativa Japonica Group] gi|125561637|gb|EAZ07085.1| hypothetical protein OsI_29332 [Oryza sativa Indica Group] gi|215741119|dbj|BAG97614.1| unnamed protein product [Oryza sativa Japonica Group] Length = 162 Score = 67.5 bits (164), Expect = 6e-10, Method: Composition-based stats. Identities = 28/99 (28%), Positives = 42/99 (42%), Gaps = 9/99 (9%) Query: 40 FDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFF-YKDHETAKCIMLKVH 98 + +VR S K+ P YRVLL NDNY E+V+ VL + A IM + H Sbjct: 67 PGRQSEFDVRKSRKMTPP--YRVLLHNDNYNRREYVVQVLMKVIPGMTVDNAVNIMQEAH 124 Query: 99 HQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 G+ + + AE + R + L+ +E Sbjct: 125 VNGLSVVIICSQSEAEEHCTSL----RGNG--LRSSIEP 157 >gi|57335897|emb|CAH25350.1| hypothetical protein [Guillardia theta] Length = 233 Score = 67.5 bits (164), Expect = 6e-10, Method: Composition-based stats. Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 1/67 (1%) Query: 49 RFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFF-YKDHETAKCIMLKVHHQGIGECGV 107 R S K K Y+VLL ND+ ++VI L + + AK I + H+ G+ GV Sbjct: 149 RPSDKTDPGKKYKVLLFNDDKNTRQYVIDTLMKYIPGMTADKAKEITVAAHNTGMAIVGV 208 Query: 108 YAYEIAE 114 + YE+AE Sbjct: 209 WMYEMAE 215 >gi|225455872|ref|XP_002274839.1| PREDICTED: hypothetical protein [Vitis vinifera] gi|297734178|emb|CBI15425.3| unnamed protein product [Vitis vinifera] Length = 157 Score = 67.1 bits (163), Expect = 7e-10, Method: Composition-based stats. Identities = 30/99 (30%), Positives = 43/99 (43%), Gaps = 9/99 (9%) Query: 40 FDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFF-YKDHETAKCIMLKVH 98 + ++R S K+ P YRVLL NDNY E+V+ VL + A IM + H Sbjct: 62 PGRESEFDLRKSRKMSPP--YRVLLHNDNYNKREYVVQVLMKVIPGMTLDNAVNIMQEAH 119 Query: 99 HQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 H G+ + A AE Q+ R + L +E Sbjct: 120 HNGMSVVIICAQVDAEDHCMQL----RGNG--LLSSIEP 152 >gi|298490087|ref|YP_003720264.1| ATP-dependent Clp protease adaptor protein ClpS ['Nostoc azollae' 0708] gi|298232005|gb|ADI63141.1| ATP-dependent Clp protease adaptor protein ClpS ['Nostoc azollae' 0708] Length = 92 Score = 67.1 bits (163), Expect = 8e-10, Method: Composition-based stats. Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 1/73 (1%) Query: 43 CLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQN-FFYKDHETAKCIMLKVHHQG 101 +++ + S+ ++ YRVLL ND+Y ME+V+ VL A IM++ H+ G Sbjct: 2 SVETIEKRSTTRKLAPQYRVLLHNDDYNSMEYVVQVLMTSVPSITQPQAVNIMMEAHNSG 61 Query: 102 IGECGVYAYEIAE 114 + A E AE Sbjct: 62 LALVITCAQEHAE 74 >gi|32477341|ref|NP_870335.1| hypothetical protein RB12137 [Rhodopirellula baltica SH 1] gi|32447892|emb|CAD77410.1| conserved hypothetical protein [Rhodopirellula baltica SH 1] gi|327537948|gb|EGF24645.1| ATP-dependent Clp protease adaptor protein ClpS [Rhodopirellula baltica WH47] Length = 116 Score = 67.1 bits (163), Expect = 8e-10, Method: Composition-based stats. Identities = 22/92 (23%), Positives = 40/92 (43%) Query: 36 GIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIML 95 +AE D + E R K + Y V+L +D ++VI +++ F E + Sbjct: 7 AVAEPDVVTEEEQRSDRKPKRQPPYHVILWDDTDHSYDYVISMMKRLFRMPIEKGYQVAK 66 Query: 96 KVHHQGIGECGVYAYEIAEMKVNQVMNYSRQH 127 +V G C E+AE+K +Q+ + + Sbjct: 67 EVDKSGRAICMTTTLELAELKRDQIHAFGKDE 98 >gi|284052626|ref|ZP_06382836.1| ATP-dependent Clp protease adaptor protein ClpS [Arthrospira platensis str. Paraca] Length = 93 Score = 66.8 bits (162), Expect = 8e-10, Method: Composition-based stats. Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 1/73 (1%) Query: 43 CLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQ-NFFYKDHETAKCIMLKVHHQG 101 + + S+ ++ YRVLL ND++ PME+V+ VL A IM++ H G Sbjct: 2 STQTVEKTSTNRKLAPRYRVLLHNDDHNPMEYVVQVLMSTVPGLTQPQAVSIMMEAHTNG 61 Query: 102 IGECGVYAYEIAE 114 + A E AE Sbjct: 62 LALVITCALEHAE 74 >gi|318042663|ref|ZP_07974619.1| ATP-dependent Clp protease adaptor protein ClpS [Synechococcus sp. CB0101] Length = 121 Score = 66.8 bits (162), Expect = 9e-10, Method: Composition-based stats. Identities = 25/93 (26%), Positives = 40/93 (43%), Gaps = 8/93 (8%) Query: 48 VRFSSKVRVP-KLYRVLLVNDNYTPMEFVIHVLQNFF-YKDHETAKCIMLKVHHQGIGEC 105 + +VR P Y+VLL ND ME+V+ L+ + A +ML+ H+ G+G Sbjct: 34 EKAPERVRKPSPRYKVLLHNDPVNTMEYVVGTLRQVVPSLSEQDAIAVMLEAHNTGVGLV 93 Query: 106 GVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 V E AE ++ L +E + Sbjct: 94 IVCDIEPAE--FYSETLKAKG----LTSTIEPE 120 >gi|166367986|ref|YP_001660259.1| ATP-dependent Clp protease adaptor protein ClpS [Microcystis aeruginosa NIES-843] gi|166090359|dbj|BAG05067.1| ATP-dependent Clp protease adaptor protein [Microcystis aeruginosa NIES-843] Length = 91 Score = 66.8 bits (162), Expect = 9e-10, Method: Composition-based stats. Identities = 24/70 (34%), Positives = 33/70 (47%), Gaps = 2/70 (2%) Query: 47 EVRFSSKVRVP-KLYRVLLVNDNYTPMEFVIHVL-QNFFYKDHETAKCIMLKVHHQGIGE 104 E R ++ +R P YRVLL ND++ ME+V+ L Q A IM++ H G Sbjct: 3 EKRSTATIRKPAPRYRVLLHNDDFNSMEYVVQSLMQTIAGMTQPQAVDIMMEAHTNGTAL 62 Query: 105 CGVYAYEIAE 114 E AE Sbjct: 63 VITCIQEHAE 72 >gi|159029424|emb|CAO90801.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 95 Score = 66.8 bits (162), Expect = 9e-10, Method: Composition-based stats. Identities = 24/70 (34%), Positives = 33/70 (47%), Gaps = 2/70 (2%) Query: 47 EVRFSSKVRVP-KLYRVLLVNDNYTPMEFVIHVL-QNFFYKDHETAKCIMLKVHHQGIGE 104 E R ++ +R P YRVLL ND++ ME+V+ L Q A IM++ H G Sbjct: 7 EKRSTATIRKPAPRYRVLLHNDDFNSMEYVVQSLMQTIAGMTQPQAVDIMMEAHTNGTAL 66 Query: 105 CGVYAYEIAE 114 E AE Sbjct: 67 VITCIQEHAE 76 >gi|75907498|ref|YP_321794.1| ATP-dependent Clp protease adaptor protein ClpS [Anabaena variabilis ATCC 29413] gi|75701223|gb|ABA20899.1| ATP-dependent Clp protease adaptor protein ClpS [Anabaena variabilis ATCC 29413] Length = 93 Score = 66.8 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 1/73 (1%) Query: 43 CLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQ-NFFYKDHETAKCIMLKVHHQG 101 +++ + S+ ++ YRVLL ND+Y ME+V+ VL A IM++ H G Sbjct: 2 SVETIEKRSTSRKLAPRYRVLLHNDDYNSMEYVVQVLITTVPSLTQPQAVSIMMEAHTNG 61 Query: 102 IGECGVYAYEIAE 114 + A E AE Sbjct: 62 LALVITCAQEHAE 74 >gi|126657545|ref|ZP_01728701.1| ATP-dependent Clp protease adaptor protein ClpS [Cyanothece sp. CCY0110] gi|172037153|ref|YP_001803654.1| ATP-dependent Clp protease adaptor protein ClpS [Cyanothece sp. ATCC 51142] gi|126621249|gb|EAZ91962.1| ATP-dependent Clp protease adaptor protein ClpS [Cyanothece sp. CCY0110] gi|171698607|gb|ACB51588.1| putative ATP-dependent Clp protease, adaptor protein [Cyanothece sp. ATCC 51142] Length = 97 Score = 66.4 bits (161), Expect = 1e-09, Method: Composition-based stats. Identities = 21/61 (34%), Positives = 28/61 (45%), Gaps = 1/61 (1%) Query: 55 RVPKLYRVLLVNDNYTPMEFVIHVL-QNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIA 113 + YRVLL ND++ ME+V+ L Q A IM++ H G A E A Sbjct: 18 KPAPRYRVLLHNDDFNSMEYVVQTLMQTVSGMTQPQAVDIMMEAHTNGTALVITCALEPA 77 Query: 114 E 114 E Sbjct: 78 E 78 >gi|148243279|ref|YP_001228436.1| ATP-dependent Clp protease adaptor protein ClpS [Synechococcus sp. RCC307] gi|147851589|emb|CAK29083.1| ATP-dependent Clp protease adaptor protein ClpS [Synechococcus sp. RCC307] Length = 107 Score = 66.0 bits (160), Expect = 1e-09, Method: Composition-based stats. Identities = 25/87 (28%), Positives = 38/87 (43%), Gaps = 2/87 (2%) Query: 30 SRMNKKGIAEFDNCLDSEVRFSSKVRVP-KLYRVLLVNDNYTPMEFVIHVLQNFF-YKDH 87 + ++ ++ R VR P YRVLL ND ME+V+ L+ Sbjct: 2 THASETPVSSPGGGAAVMERQPETVRKPSPRYRVLLHNDPVNSMEYVVTSLREVVPSLSE 61 Query: 88 ETAKCIMLKVHHQGIGECGVYAYEIAE 114 + A +ML+ H+ G+G V E AE Sbjct: 62 QDAMAVMLEAHNSGVGLVIVCDIEPAE 88 >gi|124024066|ref|YP_001018373.1| ATP-dependent Clp protease adaptor protein ClpS [Prochlorococcus marinus str. MIT 9303] gi|123964352|gb|ABM79108.1| Uncharacterized conserved protein [Prochlorococcus marinus str. MIT 9303] Length = 120 Score = 66.0 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 27/107 (25%), Positives = 41/107 (38%), Gaps = 7/107 (6%) Query: 9 MYHRVKRDGILALMSFIFMADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDN 68 M R G L ++ ++ G E + + Y+VLL ND Sbjct: 1 MGERPTYIGALPIV-LAMAVNAPSPSPG-----GAAVLEKQTERIRKQSPHYKVLLHNDP 54 Query: 69 YTPMEFVIHVLQNFF-YKDHETAKCIMLKVHHQGIGECGVYAYEIAE 114 ME+V+ LQ + A +ML+ H+ G+G V E AE Sbjct: 55 VNSMEYVVVTLQQVVPQLSEQDAMAVMLEAHNTGVGLVIVCDLEPAE 101 >gi|189218668|ref|YP_001939309.1| ATP-dependent Clp protease adaptor protein clpS [Methylacidiphilum infernorum V4] gi|189185526|gb|ACD82711.1| ATP-dependent Clp protease adaptor protein clpS [Methylacidiphilum infernorum V4] Length = 108 Score = 66.0 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 26/106 (24%), Positives = 45/106 (42%), Gaps = 6/106 (5%) Query: 32 MNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAK 91 M + + + V K +L+ V++ ND M +V++V Q + A Sbjct: 8 MAVAQLTSPEVVKEESVEDKVKEAFDQLWGVIVWNDPINLMSYVVYVFQRVLKMSKQDAT 67 Query: 92 CIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 ML+VH++G E AE+ V+Q+ + LQ ME+ Sbjct: 68 RHMLEVHNKGKSMVAKETKEKAELLVHQLQ------GFGLQATMEK 107 >gi|218246012|ref|YP_002371383.1| ATP-dependent Clp protease adaptor protein ClpS [Cyanothece sp. PCC 8801] gi|257059062|ref|YP_003136950.1| ATP-dependent Clp protease adaptor protein ClpS [Cyanothece sp. PCC 8802] gi|218166490|gb|ACK65227.1| ATP-dependent Clp protease adaptor protein ClpS [Cyanothece sp. PCC 8801] gi|256589228|gb|ACV00115.1| ATP-dependent Clp protease adaptor protein ClpS [Cyanothece sp. PCC 8802] Length = 97 Score = 65.6 bits (159), Expect = 2e-09, Method: Composition-based stats. Identities = 21/71 (29%), Positives = 30/71 (42%), Gaps = 1/71 (1%) Query: 45 DSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVL-QNFFYKDHETAKCIMLKVHHQGIG 103 ++ + YRVLL ND++ ME+V+ L Q A IM++ H G Sbjct: 8 KRSTSSATVRKPAPRYRVLLHNDDFNSMEYVVQTLMQTVAGMTQPQAVDIMMEAHTNGTA 67 Query: 104 ECGVYAYEIAE 114 A E AE Sbjct: 68 LVITCALEHAE 78 >gi|116075699|ref|ZP_01472958.1| ATP-dependent Clp protease adaptor protein ClpS [Synechococcus sp. RS9916] gi|116067014|gb|EAU72769.1| ATP-dependent Clp protease adaptor protein ClpS [Synechococcus sp. RS9916] Length = 104 Score = 65.6 bits (159), Expect = 2e-09, Method: Composition-based stats. Identities = 23/85 (27%), Positives = 36/85 (42%), Gaps = 7/85 (8%) Query: 55 RVPKLYRVLLVNDNYTPMEFVIHVLQNFF-YKDHETAKCIMLKVHHQGIGECGVYAYEIA 113 + Y+VLL ND ME+V+ LQ + A +ML+ H+ G+G V E A Sbjct: 25 KRSPRYKVLLHNDPVNSMEYVVSTLQQVVPQLSEQDAMAVMLEAHNSGVGLVIVCDLEPA 84 Query: 114 EMKVNQVMNYSRQHQYPLQCIMEQK 138 E ++ L +E + Sbjct: 85 E--FYCETLKAKG----LTSTLEPE 103 >gi|33864059|ref|NP_895619.1| ATP-dependent Clp protease adaptor protein ClpS [Prochlorococcus marinus str. MIT 9313] gi|33635643|emb|CAE21967.1| conserved hypothetical protein [Prochlorococcus marinus str. MIT 9313] Length = 130 Score = 65.6 bits (159), Expect = 2e-09, Method: Composition-based stats. Identities = 26/108 (24%), Positives = 42/108 (38%), Gaps = 7/108 (6%) Query: 8 SMYHRVKRDGILALMSFIFMADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVND 67 +M R G + ++ ++ G E + + Y+VLL ND Sbjct: 10 TMGERPTYIGAVPIV-LAMAVNAPSPTPG-----GAAVLEKQTERIRKQSPHYKVLLHND 63 Query: 68 NYTPMEFVIHVLQNFF-YKDHETAKCIMLKVHHQGIGECGVYAYEIAE 114 ME+V+ LQ + A +ML+ H+ G+G V E AE Sbjct: 64 PVNSMEYVVVTLQQVVPQLSEQDAMAVMLEAHNTGVGLVIVCDLEPAE 111 >gi|300868553|ref|ZP_07113170.1| ATP-dependent Clp protease adaptor protein ClpS [Oscillatoria sp. PCC 6506] gi|300333431|emb|CBN58362.1| ATP-dependent Clp protease adaptor protein ClpS [Oscillatoria sp. PCC 6506] Length = 93 Score = 65.6 bits (159), Expect = 2e-09, Method: Composition-based stats. Identities = 21/73 (28%), Positives = 36/73 (49%), Gaps = 1/73 (1%) Query: 43 CLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQ-NFFYKDHETAKCIMLKVHHQG 101 +++ + S+ ++ YRVLL ND++ ME+V+ L A IM++ H G Sbjct: 2 SVETIEKRSTVRKIAPRYRVLLHNDDFNSMEYVVQTLMHTVPSLTQPQAVNIMMEAHTNG 61 Query: 102 IGECGVYAYEIAE 114 + + A E AE Sbjct: 62 LAVVIICAQEHAE 74 >gi|255630508|gb|ACU15612.1| unknown [Glycine max] Length = 155 Score = 65.2 bits (158), Expect = 2e-09, Method: Composition-based stats. Identities = 24/96 (25%), Positives = 38/96 (39%), Gaps = 7/96 (7%) Query: 43 CLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFF-YKDHETAKCIMLKVHHQG 101 +SE + YRV+L NDN+ E+V+ VL + A IM + H+ G Sbjct: 61 GRESEFDLKKSRKSAPPYRVILHNDNFNKREYVVQVLMKVIPGMTLDNAVNIMQEAHYNG 120 Query: 102 IGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 + + AE Q+ R + L +E Sbjct: 121 LSVVIICDQADAEDHCMQL----RGNG--LLSSIEP 150 >gi|33862055|ref|NP_893616.1| ATP-dependent Clp protease adaptor protein ClpS [Prochlorococcus marinus subsp. pastoris str. CCMP1986] gi|33634273|emb|CAE19958.1| conserved hypothetical protein [Prochlorococcus marinus subsp. pastoris str. CCMP1986] Length = 118 Score = 65.2 bits (158), Expect = 2e-09, Method: Composition-based stats. Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 1/78 (1%) Query: 38 AEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFF-YKDHETAKCIMLK 96 E +N E + + Y+VLL ND ME+V + L+ + A IML+ Sbjct: 22 GENNNAAVLEKKTAPLKNKSPKYKVLLHNDPVNSMEYVTNALREVVPQLSEQDAISIMLE 81 Query: 97 VHHQGIGECGVYAYEIAE 114 H+ G+G V E AE Sbjct: 82 AHNTGVGLVIVCDLEPAE 99 >gi|255632171|gb|ACU16445.1| unknown [Glycine max] Length = 155 Score = 65.2 bits (158), Expect = 3e-09, Method: Composition-based stats. Identities = 24/96 (25%), Positives = 38/96 (39%), Gaps = 7/96 (7%) Query: 43 CLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFF-YKDHETAKCIMLKVHHQG 101 +SE + YRV+L NDN+ E+V+ VL + A IM + H+ G Sbjct: 61 GRESEFDLKKSRKSAPPYRVILHNDNFNKREYVVQVLMKVIPGMTLDNAVNIMQEAHYNG 120 Query: 102 IGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 + + AE Q+ R + L +E Sbjct: 121 LSVVIICDQADAEDHCTQL----RGNG--LLSSIEP 150 >gi|317968680|ref|ZP_07970070.1| ATP-dependent Clp protease adaptor protein ClpS [Synechococcus sp. CB0205] Length = 106 Score = 65.2 bits (158), Expect = 3e-09, Method: Composition-based stats. Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 2/69 (2%) Query: 48 VRFSSKVRVP-KLYRVLLVNDNYTPMEFVIHVLQNFF-YKDHETAKCIMLKVHHQGIGEC 105 + +VR P Y+VLL ND ME+V+ L+ + A +M++ H+ G+G Sbjct: 19 EKAPERVRKPSPRYKVLLHNDPVNTMEYVVSTLRQVVPSLSEQDAIAVMMEAHNTGVGLV 78 Query: 106 GVYAYEIAE 114 V E AE Sbjct: 79 IVCDIEPAE 87 >gi|255326292|ref|ZP_05367378.1| ATP-dependent Clp protease adaptor protein ClpS [Rothia mucilaginosa ATCC 25296] gi|255296746|gb|EET76077.1| ATP-dependent Clp protease adaptor protein ClpS [Rothia mucilaginosa ATCC 25296] Length = 106 Score = 65.2 bits (158), Expect = 3e-09, Method: Composition-based stats. Identities = 23/83 (27%), Positives = 39/83 (46%), Gaps = 3/83 (3%) Query: 41 DNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQ 100 D LD+ + P ++V++ ND M +V +V ++ F A+ +ML+VH+ Sbjct: 15 DTDLDTALENILATDTP--WKVIVWNDPVNLMTYVSYVFRSHFGYSRARAEELMLQVHNN 72 Query: 101 GIGECGVYAYEIAEMKVNQVMNY 123 G + E AE K Q M+ Sbjct: 73 GKAIVFTGSREDAE-KHTQAMHA 94 >gi|224001838|ref|XP_002290591.1| predicted protein [Thalassiosira pseudonana CCMP1335] gi|220974013|gb|EED92343.1| predicted protein [Thalassiosira pseudonana CCMP1335] Length = 147 Score = 65.2 bits (158), Expect = 3e-09, Method: Composition-based stats. Identities = 24/78 (30%), Positives = 31/78 (39%) Query: 37 IAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLK 96 I + D + E SK + V L ND EFV L D A +M+ Sbjct: 50 IKKSDIDTNYETDADSKSAKDPGWLVRLYNDPMNKREFVARCLMEICGLDDGAAYTVMMH 109 Query: 97 VHHQGIGECGVYAYEIAE 114 H QG+ G Y E+AE Sbjct: 110 AHQQGLSVIGKYHREVAE 127 >gi|149192135|ref|ZP_01870357.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio shilonii AK1] gi|148834038|gb|EDL51053.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio shilonii AK1] Length = 60 Score = 65.2 bits (158), Expect = 3e-09, Method: Composition-based stats. Identities = 18/40 (45%), Positives = 28/40 (70%) Query: 45 DSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFY 84 D + +KV P +Y V+L ND+YTPM+FV+ +L+ FF+ Sbjct: 13 DLLEKEKTKVEPPAMYNVVLNNDDYTPMDFVVEILERFFH 52 >gi|283458302|ref|YP_003362921.1| hypothetical protein RMDY18_12690 [Rothia mucilaginosa DY-18] gi|283134336|dbj|BAI65101.1| uncharacterized conserved protein [Rothia mucilaginosa DY-18] Length = 106 Score = 64.8 bits (157), Expect = 3e-09, Method: Composition-based stats. Identities = 22/83 (26%), Positives = 39/83 (46%), Gaps = 3/83 (3%) Query: 41 DNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQ 100 D LD+ + P ++V++ ND M +V ++ ++ F A+ +ML+VH+ Sbjct: 15 DTDLDTTLENILATDTP--WKVIVWNDPVNLMTYVSYIFRSHFGYSRARAEELMLQVHNN 72 Query: 101 GIGECGVYAYEIAEMKVNQVMNY 123 G + E AE K Q M+ Sbjct: 73 GKAIVFTGSREDAE-KHTQAMHA 94 >gi|72382903|ref|YP_292258.1| ATP-dependent Clp protease adaptor protein ClpS [Prochlorococcus marinus str. NATL2A] gi|72002753|gb|AAZ58555.1| conserved hypothetical protein [Prochlorococcus marinus str. NATL2A] Length = 123 Score = 64.8 bits (157), Expect = 3e-09, Method: Composition-based stats. Identities = 27/95 (28%), Positives = 42/95 (44%), Gaps = 6/95 (6%) Query: 21 LMSFIFMADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQ 80 + + M DS G +D EV+ K+ Y+VLL ND M++V+ +L+ Sbjct: 15 HLESLIMVDSANQTDGDT---AVIDREVQRVRKISP--KYKVLLHNDPVNTMDYVVEILR 69 Query: 81 NFF-YKDHETAKCIMLKVHHQGIGECGVYAYEIAE 114 + A IML+ H+ G+G E AE Sbjct: 70 QVVPQLSEQDALNIMLETHNNGVGLVITCDLEPAE 104 >gi|282899028|ref|ZP_06307010.1| ATP-dependent Clp protease adaptor protein ClpS [Cylindrospermopsis raciborskii CS-505] gi|281196168|gb|EFA71083.1| ATP-dependent Clp protease adaptor protein ClpS [Cylindrospermopsis raciborskii CS-505] Length = 93 Score = 64.8 bits (157), Expect = 3e-09, Method: Composition-based stats. Identities = 27/96 (28%), Positives = 42/96 (43%), Gaps = 7/96 (7%) Query: 43 CLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHV-LQNFFYKDHETAKCIMLKVHHQG 101 +++ + S+ ++ YRVLL ND+Y ME+V+ V L A IM++ H G Sbjct: 2 SVETIEKPSTTRKLAPRYRVLLHNDDYNSMEYVVQVLLSTIPSLTQPQAVSIMMEAHSHG 61 Query: 102 IGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 + A E AE + NY L +E Sbjct: 62 LALVISCALEHAEFYCESLNNYG------LTSTIEP 91 >gi|302529732|ref|ZP_07282074.1| ATP-dependent Clp protease adaptor protein ClpS [Streptomyces sp. AA4] gi|302438627|gb|EFL10443.1| ATP-dependent Clp protease adaptor protein ClpS [Streptomyces sp. AA4] Length = 102 Score = 64.8 bits (157), Expect = 4e-09, Method: Composition-based stats. Identities = 24/101 (23%), Positives = 40/101 (39%), Gaps = 8/101 (7%) Query: 37 IAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLK 96 +A +D ++ P +R ++ ND M +V +V Q F + A +ML Sbjct: 8 VASEQTQVDPLGAELAESDQP--WRTIVWNDPVNLMSYVTYVFQKLFGYSRDHATKLMLD 65 Query: 97 VHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 VH++G + E E V ++ L MEQ Sbjct: 66 VHNKGRAIVSSGSKEKVETDVAKLHAAG------LWATMEQ 100 >gi|254430350|ref|ZP_05044053.1| ATP-dependent Clp protease adaptor protein ClpS [Cyanobium sp. PCC 7001] gi|197624803|gb|EDY37362.1| ATP-dependent Clp protease adaptor protein ClpS [Cyanobium sp. PCC 7001] Length = 113 Score = 64.8 bits (157), Expect = 4e-09, Method: Composition-based stats. Identities = 26/100 (26%), Positives = 41/100 (41%), Gaps = 11/100 (11%) Query: 17 GILALMSFIFMADSRMNKKGIAEFDNCLDSEVRFSSKVRVP-KLYRVLLVNDNYTPMEFV 75 + + SR + + E + +VR P Y+VLL ND ME+V Sbjct: 4 AAMTTVPQATQTPSRESGAAVME---------KAPERVRKPSPRYKVLLHNDPVNSMEYV 54 Query: 76 IHVLQNFF-YKDHETAKCIMLKVHHQGIGECGVYAYEIAE 114 + L+ + A +ML+ H+ G+G V E AE Sbjct: 55 VTTLRQVVPSLSEQDAIAVMLEAHNTGVGLVIVCDLEPAE 94 >gi|67924069|ref|ZP_00517517.1| ATP-dependent Clp protease adaptor protein ClpS [Crocosphaera watsonii WH 8501] gi|67854068|gb|EAM49379.1| ATP-dependent Clp protease adaptor protein ClpS [Crocosphaera watsonii WH 8501] Length = 97 Score = 64.8 bits (157), Expect = 4e-09, Method: Composition-based stats. Identities = 23/76 (30%), Positives = 31/76 (40%), Gaps = 1/76 (1%) Query: 40 FDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVL-QNFFYKDHETAKCIMLKVH 98 D S+ + YRVLL ND++ ME+V+ L Q A IM++ H Sbjct: 3 TDVIEKPSSSTSTVRKPAPRYRVLLHNDDFNSMEYVVQTLMQTVPSITQPQAVDIMMEAH 62 Query: 99 HQGIGECGVYAYEIAE 114 G A E AE Sbjct: 63 SNGTALVITCALEPAE 78 >gi|282897015|ref|ZP_06305017.1| ATP-dependent Clp protease adaptor protein ClpS [Raphidiopsis brookii D9] gi|281197667|gb|EFA72561.1| ATP-dependent Clp protease adaptor protein ClpS [Raphidiopsis brookii D9] Length = 93 Score = 64.8 bits (157), Expect = 4e-09, Method: Composition-based stats. Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 1/73 (1%) Query: 43 CLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHV-LQNFFYKDHETAKCIMLKVHHQG 101 +++ + S+ ++ YRVLL ND+Y ME+V+ V L A IM++ H G Sbjct: 2 SVETIEKPSTTRKLAPRYRVLLHNDDYNSMEYVVQVLLSTIPSLTQPQAVTIMMEAHSNG 61 Query: 102 IGECGVYAYEIAE 114 + A E AE Sbjct: 62 LALVISCALEHAE 74 >gi|158338702|ref|YP_001519879.1| ATP-dependent Clp protease adaptor protein ClpS [Acaryochloris marina MBIC11017] gi|158308943|gb|ABW30560.1| ATP-dependent Clp protease adaptor protein ClpS [Acaryochloris marina MBIC11017] Length = 93 Score = 64.4 bits (156), Expect = 4e-09, Method: Composition-based stats. Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 1/73 (1%) Query: 43 CLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVL-QNFFYKDHETAKCIMLKVHHQG 101 +++ + S+ ++ YRVLL ND++ ME V+ VL Q A +M++ H G Sbjct: 2 SVETLEKRSTSRKLAPKYRVLLHNDDFNSMEHVVQVLIQTVPNLTQPQAVSVMMEAHTNG 61 Query: 102 IGECGVYAYEIAE 114 I A+E AE Sbjct: 62 IALVITCAFEHAE 74 >gi|87310728|ref|ZP_01092855.1| hypothetical protein DSM3645_06866 [Blastopirellula marina DSM 3645] gi|87286485|gb|EAQ78392.1| hypothetical protein DSM3645_06866 [Blastopirellula marina DSM 3645] Length = 117 Score = 64.4 bits (156), Expect = 5e-09, Method: Composition-based stats. Identities = 24/97 (24%), Positives = 43/97 (44%), Gaps = 2/97 (2%) Query: 33 NKKGIAEF--DNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETA 90 N+ +AE + S+ + +K + Y V+L ND+ ++VI ++++ F E Sbjct: 4 NESAVAEPWEATTVKSKPKNDTKRKKQPRYNVILWNDDDHTYDYVILMMRDLFGHPVEAG 63 Query: 91 KCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQH 127 I V G C E AE+K +Q+ Y + Sbjct: 64 FKIAETVDAAGRAICLTTTREHAELKRDQIHAYGKDE 100 >gi|148972604|ref|ZP_01811408.1| ATP-dependent Clp protease adaptor protein ClpS [Leptolyngbya valderiana BDU 20041] gi|148872733|gb|EDL71122.1| ATP-dependent Clp protease adaptor protein ClpS [Leptolyngbya valderiana BDU 20041] Length = 93 Score = 64.1 bits (155), Expect = 5e-09, Method: Composition-based stats. Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 1/73 (1%) Query: 43 CLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVL-QNFFYKDHETAKCIMLKVHHQG 101 +++ + S+ + YRVLL ND++ ME+V+ L + A IM++ H G Sbjct: 2 SVETIEKRSTVRKHAPRYRVLLHNDDFNTMEYVVQTLVKTVPGLTQPQAVSIMMEAHTNG 61 Query: 102 IGECGVYAYEIAE 114 + A E AE Sbjct: 62 MALVITCAQEHAE 74 >gi|257069152|ref|YP_003155407.1| hypothetical protein Bfae_20090 [Brachybacterium faecium DSM 4810] gi|256559970|gb|ACU85817.1| uncharacterized conserved protein [Brachybacterium faecium DSM 4810] Length = 107 Score = 64.1 bits (155), Expect = 6e-09, Method: Composition-based stats. Identities = 19/75 (25%), Positives = 36/75 (48%), Gaps = 6/75 (8%) Query: 63 LLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMN 122 ++ ND M +V+ V + +F H A+ +M++VH +G + E AE V + + Sbjct: 35 VVWNDPVNLMSYVVFVFRRYFGYSHLVAEQLMMQVHEEGRAIVSRGSRERAETDVQAMHS 94 Query: 123 YSRQHQYPLQCIMEQ 137 + LQ +E+ Sbjct: 95 FG------LQATLER 103 >gi|257056896|ref|YP_003134728.1| hypothetical protein Svir_29230 [Saccharomonospora viridis DSM 43017] gi|256586768|gb|ACU97901.1| uncharacterized conserved protein [Saccharomonospora viridis DSM 43017] Length = 94 Score = 64.1 bits (155), Expect = 6e-09, Method: Composition-based stats. Identities = 22/80 (27%), Positives = 33/80 (41%), Gaps = 6/80 (7%) Query: 58 KLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKV 117 + ++ ++ ND M +V +V Q F E A +ML VHH+G E E V Sbjct: 20 RPWQTIVWNDPVNLMSYVTYVFQKIFGYSKEHATKLMLDVHHKGRAVVSSGTKEKVEGDV 79 Query: 118 NQVMNYSRQHQYPLQCIMEQ 137 ++ L MEQ Sbjct: 80 AKLHAAG------LWATMEQ 93 >gi|300789536|ref|YP_003769827.1| ATP-dependent Clp protease adaptor protein ClpS [Amycolatopsis mediterranei U32] gi|299799050|gb|ADJ49425.1| ATP-dependent Clp protease adaptor protein ClpS [Amycolatopsis mediterranei U32] Length = 99 Score = 64.1 bits (155), Expect = 7e-09, Method: Composition-based stats. Identities = 23/101 (22%), Positives = 39/101 (38%), Gaps = 8/101 (7%) Query: 37 IAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLK 96 +A ++ ++ P +R ++ ND M +V +V Q F + A +ML Sbjct: 5 VASEQTQVEPAGAEVAESDTP--WRTVVWNDPVNLMSYVTYVFQKLFGYSRDHATKLMLD 62 Query: 97 VHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 VH +G + E E V ++ L MEQ Sbjct: 63 VHQKGKAIVSSGSKEKVETDVAKLHAAG------LWATMEQ 97 >gi|123966912|ref|YP_001011993.1| ATP-dependent Clp protease adaptor protein ClpS [Prochlorococcus marinus str. MIT 9515] gi|229889822|sp|A2BYM5|CLPS_PROM5 RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|123201278|gb|ABM72886.1| Uncharacterized conserved protein [Prochlorococcus marinus str. MIT 9515] Length = 105 Score = 63.7 bits (154), Expect = 7e-09, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 35/78 (44%), Gaps = 1/78 (1%) Query: 38 AEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFF-YKDHETAKCIMLK 96 + +N E + ++ Y+VLL ND ME++ L+ + A IML+ Sbjct: 9 GDNNNAAVLEKKTAALKNKSPKYKVLLHNDPVNSMEYITIALREVVPQLSEQDAIAIMLE 68 Query: 97 VHHQGIGECGVYAYEIAE 114 H+ G+G V E AE Sbjct: 69 AHNNGVGLVIVCDLEPAE 86 >gi|17231817|ref|NP_488365.1| ATP-dependent Clp protease adaptor protein ClpS [Nostoc sp. PCC 7120] gi|17133461|dbj|BAB76024.1| asl4325 [Nostoc sp. PCC 7120] Length = 93 Score = 63.7 bits (154), Expect = 8e-09, Method: Composition-based stats. Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 1/73 (1%) Query: 43 CLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQ-NFFYKDHETAKCIMLKVHHQG 101 +++ + S+ ++ YRVLL ND++ ME+V+ VL A IM++ H G Sbjct: 2 SVETIEKRSTSRKLAPRYRVLLHNDDHNSMEYVVQVLITTVPSLTQPQAVSIMMEAHTNG 61 Query: 102 IGECGVYAYEIAE 114 + A E AE Sbjct: 62 LALVITCAQEHAE 74 >gi|214090057|gb|ACJ63449.1| putative ATP-dependent Clp protease adaptor protein [Ochrobactrum sp. 11a] Length = 64 Score = 63.7 bits (154), Expect = 8e-09, Method: Composition-based stats. Identities = 22/48 (45%), Positives = 28/48 (58%) Query: 31 RMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHV 78 + G +N R K + P LYRVLL+ND+YTPMEFV+HV Sbjct: 17 QSKTDGGNGPENGTVVVTRTQPKTKKPSLYRVLLLNDDYTPMEFVVHV 64 >gi|289706343|ref|ZP_06502701.1| ATP-dependent Clp protease adaptor protein ClpS [Micrococcus luteus SK58] gi|289556838|gb|EFD50171.1| ATP-dependent Clp protease adaptor protein ClpS [Micrococcus luteus SK58] Length = 120 Score = 63.3 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 23/115 (20%), Positives = 39/115 (33%), Gaps = 6/115 (5%) Query: 23 SFIFMADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNF 82 A + + R + + V++ ND M +V +V + Sbjct: 9 PSAPRAVRPAPGESVPAGATDTALLERPHEDTARDRPWNVVVWNDPVNLMSYVAYVFRTH 68 Query: 83 FYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 F A+ +ML+VH +G E AE ++ H Y L +EQ Sbjct: 69 FGYSAAKAQRLMLEVHERGRSVVATGTKEKAE------LHVGAMHGYGLWATLEQ 117 >gi|170078877|ref|YP_001735515.1| ATP-dependent Clp protease adaptor protein ClpS [Synechococcus sp. PCC 7002] gi|169886546|gb|ACB00260.1| ATP-dependent Clp protease adaptor protein [Synechococcus sp. PCC 7002] Length = 95 Score = 63.3 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 26/70 (37%), Positives = 33/70 (47%), Gaps = 2/70 (2%) Query: 47 EVRFSSKVRVP-KLYRVLLVNDNYTPMEFVIHVL-QNFFYKDHETAKCIMLKVHHQGIGE 104 E R +S +R P YRVLL ND++ ME V+ L Q A IM++ H GI Sbjct: 7 EQRSTSTIRKPAPRYRVLLHNDDFNSMEHVVQTLMQTVAGLTQPQAVSIMMEAHTNGIAL 66 Query: 105 CGVYAYEIAE 114 E AE Sbjct: 67 VITCVQEHAE 76 >gi|124026645|ref|YP_001015760.1| ATP-dependent Clp protease adaptor protein ClpS [Prochlorococcus marinus str. NATL1A] gi|123961713|gb|ABM76496.1| Uncharacterized conserved protein [Prochlorococcus marinus str. NATL1A] Length = 123 Score = 63.3 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 24/86 (27%), Positives = 39/86 (45%), Gaps = 4/86 (4%) Query: 31 RMNKKGIAEFDNC-LDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFF-YKDHE 88 ++ + D +D EV+ K+ Y+VLL ND M++V+ L+ + Sbjct: 21 MVDSANQTDGDTAVIDREVQRVRKISP--KYKVLLHNDPVNTMDYVVDTLRQVVPQLSEQ 78 Query: 89 TAKCIMLKVHHQGIGECGVYAYEIAE 114 A IML+ H+ G+G E AE Sbjct: 79 DALNIMLETHNNGVGLVITCDLEPAE 104 >gi|260906183|ref|ZP_05914505.1| ATP-dependent Clp protease adaptor protein ClpS [Brevibacterium linens BL2] Length = 101 Score = 62.9 bits (152), Expect = 1e-08, Method: Composition-based stats. Identities = 22/79 (27%), Positives = 34/79 (43%), Gaps = 1/79 (1%) Query: 44 LDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIG 103 L+ EV K ++ ++ ND M +V +V Q +F E A +ML+VH G Sbjct: 9 LEPEVDIRPVTEQAKPWKTVVFNDPVNLMSYVSYVFQAYFGYSTEKAHSLMLEVHENGRS 68 Query: 104 ECGVYAYEIAEMKVNQVMN 122 E A + Q M+ Sbjct: 69 VVATGGRE-AMERDTQAMH 86 >gi|226493842|ref|NP_001148322.1| ATP-dependent Clp protease adaptor protein ClpS containing protein [Zea mays] gi|194701232|gb|ACF84700.1| unknown [Zea mays] gi|195617588|gb|ACG30624.1| ATP-dependent Clp protease adaptor protein ClpS containing protein [Zea mays] Length = 160 Score = 62.9 bits (152), Expect = 1e-08, Method: Composition-based stats. Identities = 25/99 (25%), Positives = 42/99 (42%), Gaps = 9/99 (9%) Query: 40 FDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFF-YKDHETAKCIMLKVH 98 + +V+ S K+ P +RV+L NDN+ E+V+ VL + A IM + H Sbjct: 65 PGRQSEFDVKKSRKMTPP--FRVILHNDNHNRREYVVQVLMKVIPGMTVDNALNIMQEAH 122 Query: 99 HQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 G+ V + AE + R + L+ +E Sbjct: 123 VNGLSVVIVCSQSEAEEHCTSL----RGNG--LRSSIEP 155 >gi|239917357|ref|YP_002956915.1| hypothetical protein Mlut_08330 [Micrococcus luteus NCTC 2665] gi|281414160|ref|ZP_06245902.1| hypothetical protein MlutN2_02986 [Micrococcus luteus NCTC 2665] gi|239838564|gb|ACS30361.1| uncharacterized conserved protein [Micrococcus luteus NCTC 2665] Length = 120 Score = 62.9 bits (152), Expect = 1e-08, Method: Composition-based stats. Identities = 23/115 (20%), Positives = 38/115 (33%), Gaps = 6/115 (5%) Query: 23 SFIFMADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNF 82 A + R + + V++ ND M +V +V + Sbjct: 9 PSAPRAVRPAPGESAPAGATDTALLERPHEDTARDRPWNVVVWNDPVNLMSYVAYVFRTH 68 Query: 83 FYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 F A+ +ML+VH +G E AE ++ H Y L +EQ Sbjct: 69 FGYSAAKAQRLMLEVHERGRSVVATGTKEKAE------LHVGAMHGYGLWATLEQ 117 >gi|33633458|emb|CAE08663.1| conserved hypothetical protein [Synechococcus sp. WH 8102] Length = 154 Score = 62.9 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 21/85 (24%), Positives = 36/85 (42%), Gaps = 7/85 (8%) Query: 55 RVPKLYRVLLVNDNYTPMEFVIHVLQNFF-YKDHETAKCIMLKVHHQGIGECGVYAYEIA 113 + Y+VLL ND ME+V+ L+ + A +M++ H+ G+G V E A Sbjct: 75 KQSPRYKVLLHNDPVNTMEYVVTTLRQVVPQLSEQDAMAVMIEAHNTGVGLVIVCDLEPA 134 Query: 114 EMKVNQVMNYSRQHQYPLQCIMEQK 138 E ++ L +E + Sbjct: 135 E--FYCETLKAKG----LTSTIEPE 153 >gi|88807954|ref|ZP_01123465.1| ATP-dependent Clp protease adaptor protein ClpS [Synechococcus sp. WH 7805] gi|88787993|gb|EAR19149.1| ATP-dependent Clp protease adaptor protein ClpS [Synechococcus sp. WH 7805] Length = 104 Score = 62.9 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 1/61 (1%) Query: 55 RVPKLYRVLLVNDNYTPMEFVIHVLQNFF-YKDHETAKCIMLKVHHQGIGECGVYAYEIA 113 + Y+VLL ND ME+V+ L+ + A +ML+ H+ G+G V E A Sbjct: 25 KQSPRYKVLLHNDPVNSMEYVVSTLRQVVPQLSEQDAMAVMLEAHNTGVGLVIVCDLEPA 84 Query: 114 E 114 E Sbjct: 85 E 85 >gi|223948869|gb|ACN28518.1| unknown [Zea mays] Length = 119 Score = 62.5 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 25/99 (25%), Positives = 42/99 (42%), Gaps = 9/99 (9%) Query: 40 FDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFF-YKDHETAKCIMLKVH 98 + +V+ S K+ P +RV+L NDN+ E+V+ VL + A IM + H Sbjct: 24 PGRQSEFDVKKSRKMTPP--FRVILHNDNHNRREYVVQVLMKVIPGMTVDNALNIMQEAH 81 Query: 99 HQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 G+ V + AE + R + L+ +E Sbjct: 82 VNGLSVVIVCSQSEAEEHCTSL----RGNG--LRSSIEP 114 >gi|113474895|ref|YP_720956.1| ATP-dependent Clp protease adaptor protein ClpS [Trichodesmium erythraeum IMS101] gi|110165943|gb|ABG50483.1| ATP-dependent Clp protease adaptor protein ClpS [Trichodesmium erythraeum IMS101] Length = 95 Score = 62.5 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 1/61 (1%) Query: 55 RVPKLYRVLLVNDNYTPMEFVIHVLQN-FFYKDHETAKCIMLKVHHQGIGECGVYAYEIA 113 + YRVLL ND++ ME+V+ L A IM++ H GI + A E A Sbjct: 16 KTAPHYRVLLHNDDFNSMEYVVQTLMKTVPSLTQPQAVNIMMEAHSNGIALVIICALEPA 75 Query: 114 E 114 E Sbjct: 76 E 76 >gi|260434316|ref|ZP_05788286.1| ATP-dependent Clp protease adaptor protein ClpS [Synechococcus sp. WH 8109] gi|260412190|gb|EEX05486.1| ATP-dependent Clp protease adaptor protein ClpS [Synechococcus sp. WH 8109] Length = 123 Score = 62.5 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 28/94 (29%), Positives = 39/94 (41%), Gaps = 6/94 (6%) Query: 22 MSFIFMADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQN 81 S + DS K G A + VR + Y+VLL ND ME+V+ LQ Sbjct: 16 GSMVMAVDSPSQKPGGAAVLDKAPERVR-----KRSPRYKVLLHNDPVNSMEYVVATLQQ 70 Query: 82 FF-YKDHETAKCIMLKVHHQGIGECGVYAYEIAE 114 + +ML+ H+ G+G V E AE Sbjct: 71 VVPQLSEQDCMAVMLEAHNTGVGLVIVCDIEPAE 104 >gi|87125032|ref|ZP_01080879.1| hypothetical protein RS9917_03483 [Synechococcus sp. RS9917] gi|86167352|gb|EAQ68612.1| hypothetical protein RS9917_03483 [Synechococcus sp. RS9917] Length = 111 Score = 62.5 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 20/85 (23%), Positives = 33/85 (38%), Gaps = 1/85 (1%) Query: 31 RMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFF-YKDHET 89 + + + + Y+VLL ND ME+V+ L+ + Sbjct: 8 MVGSTSSTSPGGAAVLDKQTERVRKHSPRYKVLLHNDPVNTMEYVVTTLRQVVPQLSEQD 67 Query: 90 AKCIMLKVHHQGIGECGVYAYEIAE 114 A +ML+ H+ G+G V E AE Sbjct: 68 AMAVMLEAHNTGVGLVIVCDLEPAE 92 >gi|195652021|gb|ACG45478.1| ATP-dependent Clp protease adaptor protein ClpS containing protein [Zea mays] Length = 160 Score = 62.5 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 25/99 (25%), Positives = 42/99 (42%), Gaps = 9/99 (9%) Query: 40 FDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFF-YKDHETAKCIMLKVH 98 + +V+ S K+ P +RV+L NDN+ E+V+ VL + A IM + H Sbjct: 65 PGRQSEFDVKKSRKMTPP--FRVILHNDNHNRREYVVQVLMKVIPGMTVDNALSIMQEAH 122 Query: 99 HQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 G+ V + AE + R + L+ +E Sbjct: 123 VNGLSVVIVCSQSEAEEHCTSL----RGNG--LRSSIEP 155 >gi|123969234|ref|YP_001010092.1| ATP-dependent Clp protease adaptor protein ClpS [Prochlorococcus marinus str. AS9601] gi|123199344|gb|ABM70985.1| Uncharacterized conserved protein [Prochlorococcus marinus str. AS9601] Length = 105 Score = 62.5 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 25/65 (38%), Positives = 32/65 (49%), Gaps = 2/65 (3%) Query: 51 SSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFF-YKDHETAKCIMLKVHHQGIGECGVYA 109 K + PK Y+VLL ND ME+V L+ + A IML+ H+ GIG V Sbjct: 23 ELKNKSPK-YKVLLHNDPVNSMEYVTISLREVVPQLSEQDAIAIMLEAHNTGIGLVIVCD 81 Query: 110 YEIAE 114 E AE Sbjct: 82 LEPAE 86 >gi|113954242|ref|YP_729603.1| ATP-dependent Clp protease adaptor protein ClpS [Synechococcus sp. CC9311] gi|113881593|gb|ABI46551.1| ATP-dependent Clp protease adaptor protein ClpS [Synechococcus sp. CC9311] Length = 103 Score = 62.5 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 29/89 (32%), Positives = 38/89 (42%), Gaps = 6/89 (6%) Query: 27 MADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFF-YK 85 M D+ G A LD + K Y+VLL ND ME+V+ LQ Sbjct: 1 MVDTPSRSPGGA---AVLDKQTERVRKTSP--RYKVLLHNDPVNSMEYVVVTLQQVVPQL 55 Query: 86 DHETAKCIMLKVHHQGIGECGVYAYEIAE 114 + A +ML+ H+ GIG V E AE Sbjct: 56 SEQDAMAVMLETHNTGIGLVIVCDIEPAE 84 >gi|78779975|ref|YP_398087.1| ATP-dependent Clp protease adaptor protein ClpS [Prochlorococcus marinus str. MIT 9312] gi|78713474|gb|ABB50651.1| conserved hypothetical protein [Prochlorococcus marinus str. MIT 9312] Length = 105 Score = 62.1 bits (150), Expect = 2e-08, Method: Composition-based stats. Identities = 25/65 (38%), Positives = 32/65 (49%), Gaps = 2/65 (3%) Query: 51 SSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFF-YKDHETAKCIMLKVHHQGIGECGVYA 109 K + PK YRVLL ND ME+V L+ + A IML+ H+ G+G V Sbjct: 23 ELKNKSPK-YRVLLHNDPVNSMEYVTISLREVVPQLSEQDAIAIMLEAHNTGVGLVIVCD 81 Query: 110 YEIAE 114 E AE Sbjct: 82 LEPAE 86 >gi|307105846|gb|EFN54094.1| hypothetical protein CHLNCDRAFT_31972 [Chlorella variabilis] Length = 166 Score = 62.1 bits (150), Expect = 2e-08, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 28/59 (47%), Gaps = 1/59 (1%) Query: 57 PKLYRVLLVNDNYTPMEFVIHVLQNFF-YKDHETAKCIMLKVHHQGIGECGVYAYEIAE 114 P YRVLL NDNY E+V+ VL + A IM + H G+ A + AE Sbjct: 79 PPSYRVLLHNDNYNRREYVVQVLMKVVEGTTVDDAVNIMQEAHINGLAMVTQCAQDKAE 137 >gi|117928898|ref|YP_873449.1| ATP-dependent Clp protease adaptor protein ClpS [Acidothermus cellulolyticus 11B] gi|117649361|gb|ABK53463.1| ATP-dependent Clp protease adaptor protein ClpS [Acidothermus cellulolyticus 11B] Length = 96 Score = 62.1 bits (150), Expect = 2e-08, Method: Composition-based stats. Identities = 23/99 (23%), Positives = 39/99 (39%), Gaps = 6/99 (6%) Query: 37 IAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLK 96 +A+ R S VR + ++ ND M +V +V Q F E A+ +ML+ Sbjct: 1 MADMSTAPVEVERPESDVRPDTPWVTIVWNDPVNLMSYVTYVFQKLFGYPKEKAEKLMLQ 60 Query: 97 VHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIM 135 VH++G E + +R H + L + Sbjct: 61 VHYEGKAVVSTGRRE------QMENDAARLHAHGLWATV 93 >gi|309813284|ref|ZP_07707000.1| ATP-dependent Clp protease adaptor protein ClpS [Dermacoccus sp. Ellin185] gi|308432780|gb|EFP56696.1| ATP-dependent Clp protease adaptor protein ClpS [Dermacoccus sp. Ellin185] Length = 106 Score = 62.1 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 26/112 (23%), Positives = 44/112 (39%), Gaps = 7/112 (6%) Query: 27 MADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKD 86 M D + I +F+ + + + L+ ND M +V V Q++F Sbjct: 1 MVDVSIAPPDI-DFEQLAKQLADPDPQDVGERAWVTLVWNDPVNLMSYVSFVFQDYFGYS 59 Query: 87 HETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 E A+ +M++VH +G + E AE + H Y L EQ+ Sbjct: 60 REEAERLMMQVHTEGRAVVSKGSREKAEA------DTIAMHGYSLWATYEQE 105 >gi|299115355|emb|CBN74180.1| ATP-dependent Clp protease adaptor protein ClpS [Ectocarpus siliculosus] Length = 152 Score = 62.1 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 26/100 (26%), Positives = 43/100 (43%), Gaps = 3/100 (3%) Query: 14 KRDGILALMSFIFMADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPME 73 + L + + + M + + I D EV F + +R Y+VLL NDN E Sbjct: 36 RPISALNMAAGVAMPEIKTAGPSIGVLD---KKEVSFETSIRPEDKYKVLLFNDNGNTRE 92 Query: 74 FVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIA 113 +V L TA IM + + G+ + G++ E+A Sbjct: 93 YVSRSLVQVVGLSEATAFHIMQQANDNGMAQVGIWHQEMA 132 >gi|254423912|ref|ZP_05037630.1| ATP-dependent Clp protease adaptor protein ClpS [Synechococcus sp. PCC 7335] gi|196191401|gb|EDX86365.1| ATP-dependent Clp protease adaptor protein ClpS [Synechococcus sp. PCC 7335] Length = 97 Score = 61.7 bits (149), Expect = 3e-08, Method: Composition-based stats. Identities = 24/78 (30%), Positives = 33/78 (42%), Gaps = 3/78 (3%) Query: 38 AEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVL-QNFFYKDHETAKCIMLK 96 V K+ YRVLL ND++ ME+V+ L + A IM++ Sbjct: 3 TSISTIEKPSVSTVRKIAP--RYRVLLHNDDFNSMEYVVEALIETVPSLTAPQAIDIMMQ 60 Query: 97 VHHQGIGECGVYAYEIAE 114 H+ GIG V E AE Sbjct: 61 THNTGIGLVIVCEMEHAE 78 >gi|148238705|ref|YP_001224092.1| ATP-dependent Clp protease adaptor protein ClpS [Synechococcus sp. WH 7803] gi|147847244|emb|CAK22795.1| ATP-dependent Clp protease adaptor protein ClpS [Synechococcus sp. WH 7803] Length = 106 Score = 61.7 bits (149), Expect = 3e-08, Method: Composition-based stats. Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 1/61 (1%) Query: 55 RVPKLYRVLLVNDNYTPMEFVIHVLQNFF-YKDHETAKCIMLKVHHQGIGECGVYAYEIA 113 + Y+VLL ND ME+V+ L+ + A +ML+ H+ G+G V E A Sbjct: 27 KQSPRYKVLLHNDPVNSMEYVVSTLRQVVPQLSEQDAMAVMLEAHNTGVGLVIVCDLEPA 86 Query: 114 E 114 E Sbjct: 87 E 87 >gi|300741328|ref|ZP_07071349.1| ATP-dependent Clp protease adaptor protein ClpS [Rothia dentocariosa M567] gi|300380513|gb|EFJ77075.1| ATP-dependent Clp protease adaptor protein ClpS [Rothia dentocariosa M567] Length = 115 Score = 61.7 bits (149), Expect = 3e-08, Method: Composition-based stats. Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 3/82 (3%) Query: 42 NCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQG 101 LD+ V + + + P ++V++ ND M +V +V + F A+ +ML+VH+ G Sbjct: 25 TELDATVDENLETQTP--WQVIVWNDPVNLMTYVSYVFRAHFGFSRRRAEKLMLQVHNNG 82 Query: 102 IGECGVYAYEIAEMKVNQVMNY 123 + E AE K Q M+ Sbjct: 83 KAVVFTGSREDAE-KHTQAMHA 103 >gi|254526054|ref|ZP_05138106.1| ATP-dependent Clp protease adaptor protein ClpS [Prochlorococcus marinus str. MIT 9202] gi|221537478|gb|EEE39931.1| ATP-dependent Clp protease adaptor protein ClpS [Prochlorococcus marinus str. MIT 9202] Length = 105 Score = 61.7 bits (149), Expect = 3e-08, Method: Composition-based stats. Identities = 24/65 (36%), Positives = 32/65 (49%), Gaps = 2/65 (3%) Query: 51 SSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFF-YKDHETAKCIMLKVHHQGIGECGVYA 109 K + PK Y+VLL ND ME+V L+ + A IML+ H+ GIG + Sbjct: 23 ELKNKSPK-YKVLLHNDPVNSMEYVTISLREVVPQLSEQDAIAIMLEAHNTGIGLVIICD 81 Query: 110 YEIAE 114 E AE Sbjct: 82 LEPAE 86 >gi|186684027|ref|YP_001867223.1| ATP-dependent Clp protease adaptor protein ClpS [Nostoc punctiforme PCC 73102] gi|186466479|gb|ACC82280.1| ATP-dependent Clp protease adaptor protein ClpS [Nostoc punctiforme PCC 73102] Length = 93 Score = 61.7 bits (149), Expect = 3e-08, Method: Composition-based stats. Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 1/73 (1%) Query: 43 CLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQ-NFFYKDHETAKCIMLKVHHQG 101 +++ + S+ ++ YRVLL ND+Y ME V+ L A IM++ H G Sbjct: 2 SVETIQKPSTTRKLAPRYRVLLHNDDYNSMEHVVQSLIATVPSLTQPQAVSIMMEAHTNG 61 Query: 102 IGECGVYAYEIAE 114 + A E AE Sbjct: 62 LALVITCALEHAE 74 >gi|157414100|ref|YP_001484966.1| ATP-dependent Clp protease adaptor protein ClpS [Prochlorococcus marinus str. MIT 9215] gi|157388675|gb|ABV51380.1| Conserved hypothetical protein [Prochlorococcus marinus str. MIT 9215] Length = 105 Score = 61.7 bits (149), Expect = 3e-08, Method: Composition-based stats. Identities = 24/65 (36%), Positives = 32/65 (49%), Gaps = 2/65 (3%) Query: 51 SSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFF-YKDHETAKCIMLKVHHQGIGECGVYA 109 K + PK Y+VLL ND ME+V L+ + A IML+ H+ GIG + Sbjct: 23 ELKNKSPK-YKVLLHNDPVNSMEYVTISLREVVPQLSEQDAIAIMLEAHNTGIGLVIICD 81 Query: 110 YEIAE 114 E AE Sbjct: 82 LEPAE 86 >gi|196234336|ref|ZP_03133165.1| ATP-dependent Clp protease adaptor protein ClpS [Chthoniobacter flavus Ellin428] gi|196221603|gb|EDY16144.1| ATP-dependent Clp protease adaptor protein ClpS [Chthoniobacter flavus Ellin428] Length = 93 Score = 61.7 bits (149), Expect = 3e-08, Method: Composition-based stats. Identities = 28/97 (28%), Positives = 42/97 (43%), Gaps = 8/97 (8%) Query: 41 DNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQ 100 + ++ E + SS V VP + V++ ND +V V Q F A+ ML+VH+ Sbjct: 3 ETVVEEETKTSSAVDVP--WNVVVHNDPVNLTAYVTRVFQKVFGYSKTRAEKHMLEVHNL 60 Query: 101 GIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 G A E AE V Q+ Y L +E+ Sbjct: 61 GRSIVWTGARERAEAYVEQLH------GYLLLSTLEK 91 >gi|329936567|ref|ZP_08286303.1| ATP-dependent Clp protease adaptor protein ClpS [Streptomyces griseoaurantiacus M045] gi|329304082|gb|EGG47964.1| ATP-dependent Clp protease adaptor protein ClpS [Streptomyces griseoaurantiacus M045] Length = 105 Score = 61.7 bits (149), Expect = 3e-08, Method: Composition-based stats. Identities = 30/108 (27%), Positives = 45/108 (41%), Gaps = 8/108 (7%) Query: 32 MNKKGIAEFDNCLDSEVRFSS-KVRVPKLYRV-LLVNDNYTPMEFVIHVLQNFFYKDHET 89 M + A +E + V P L V ++ ND M +V +V Q++F + Sbjct: 1 MGRVTAAAPLEIEKTESAEETFAVPEPDLPWVTIVHNDPVNLMSYVTYVFQSYFGYSKDK 60 Query: 90 AKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 A +ML VHH+G + E E V Q M H Y L ++Q Sbjct: 61 ATKLMLDVHHKGRAVVSSGSREEMERDV-QAM-----HGYGLWATLQQ 102 >gi|311113408|ref|YP_003984630.1| ATP-dependent Clp protease adaptor protein ClpS [Rothia dentocariosa ATCC 17931] gi|310944902|gb|ADP41196.1| ATP-dependent Clp protease adaptor protein ClpS [Rothia dentocariosa ATCC 17931] Length = 115 Score = 61.7 bits (149), Expect = 3e-08, Method: Composition-based stats. Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 3/82 (3%) Query: 42 NCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQG 101 LD+ + + + + P ++V++ ND M +V +V + F A+ +ML+VH+ G Sbjct: 25 TELDATIDENLETQTP--WQVIVWNDPVNLMTYVSYVFRAHFGFSRRRAEKLMLQVHNNG 82 Query: 102 IGECGVYAYEIAEMKVNQVMNY 123 + E AE K Q M+ Sbjct: 83 KAVVFTGSREDAE-KHTQAMHA 103 >gi|296393925|ref|YP_003658809.1| ATP-dependent Clp protease adaptor protein ClpS [Segniliparus rotundus DSM 44985] gi|296181072|gb|ADG97978.1| ATP-dependent Clp protease adaptor protein ClpS [Segniliparus rotundus DSM 44985] Length = 104 Score = 61.7 bits (149), Expect = 3e-08, Method: Composition-based stats. Identities = 19/79 (24%), Positives = 32/79 (40%), Gaps = 1/79 (1%) Query: 47 EVRFSSKVRVPKLYRV-LLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGEC 105 E + + P L V ++ +D M +V +V Q F A +ML+VH+ G Sbjct: 17 EEHTTGSSQEPDLPWVTIVWDDPVNLMRYVTYVFQTVFGYSEAKATELMLQVHNDGKAVV 76 Query: 106 GVYAYEIAEMKVNQVMNYS 124 + E E V ++ Sbjct: 77 SSGSREKVETDVVKLHQAG 95 >gi|163840214|ref|YP_001624619.1| ATP-dependent Clp protease adaptor protein [Renibacterium salmoninarum ATCC 33209] gi|162953690|gb|ABY23205.1| ATP-dependent Clp protease adaptor protein [Renibacterium salmoninarum ATCC 33209] Length = 104 Score = 61.4 bits (148), Expect = 4e-08, Method: Composition-based stats. Identities = 25/106 (23%), Positives = 45/106 (42%), Gaps = 6/106 (5%) Query: 32 MNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAK 91 M+ +AE E + + V++ +D M++V +V Q++F E A+ Sbjct: 1 MSISTLAEPVEQSAVENSPAQDASGEHPWSVVVWDDPINTMDYVSYVFQSYFGYGKERAE 60 Query: 92 CIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +ML+VH+ G A E AE + H + LQ + + Sbjct: 61 ALMLQVHNGGKAVVSRGAREKAET------DMMAMHSFGLQATVRK 100 >gi|223936983|ref|ZP_03628891.1| ATP-dependent Clp protease adaptor protein ClpS [bacterium Ellin514] gi|223894264|gb|EEF60717.1| ATP-dependent Clp protease adaptor protein ClpS [bacterium Ellin514] Length = 101 Score = 61.4 bits (148), Expect = 4e-08, Method: Composition-based stats. Identities = 32/106 (30%), Positives = 50/106 (47%), Gaps = 6/106 (5%) Query: 32 MNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAK 91 M + E ++ E + +SK + Y V+ ND M++V HV Q F + + A+ Sbjct: 1 MAETATPEIMPDVEQEEQAASKSELEPGYLVVCWNDPVNLMDYVSHVFQKVFGWNRQKAE 60 Query: 92 CIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 ML+VH+QG + E AE V+Q+ YS L ME+ Sbjct: 61 QHMLEVHNQGKSVLVRESMEKAEHFVHQLQKYS------LHATMER 100 >gi|295836847|ref|ZP_06823780.1| ATP-dependent Clp protease adaptor protein ClpS [Streptomyces sp. SPB74] gi|197699546|gb|EDY46479.1| ATP-dependent Clp protease adaptor protein ClpS [Streptomyces sp. SPB74] Length = 102 Score = 61.4 bits (148), Expect = 4e-08, Method: Composition-based stats. Identities = 27/101 (26%), Positives = 43/101 (42%), Gaps = 10/101 (9%) Query: 37 IAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLK 96 + D +S V + L+ L+ ND M +V +V Q++F + A +ML Sbjct: 9 VERPDAEAESSVVTEPDL----LWITLVHNDPVNLMSYVTYVFQSYFGYSKDKATKLMLD 64 Query: 97 VHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 VH++G + E E V Q M H Y L ++Q Sbjct: 65 VHNKGRAVVSSGSREEMERDV-QAM-----HGYGLWATLQQ 99 >gi|145222937|ref|YP_001133615.1| ATP-dependent Clp protease adaptor protein ClpS [Mycobacterium gilvum PYR-GCK] gi|315443400|ref|YP_004076279.1| hypothetical protein Mspyr1_17820 [Mycobacterium sp. Spyr1] gi|145215423|gb|ABP44827.1| ATP-dependent Clp protease adaptor protein ClpS [Mycobacterium gilvum PYR-GCK] gi|315261703|gb|ADT98444.1| uncharacterized conserved protein [Mycobacterium sp. Spyr1] Length = 100 Score = 61.4 bits (148), Expect = 4e-08, Method: Composition-based stats. Identities = 21/93 (22%), Positives = 37/93 (39%), Gaps = 2/93 (2%) Query: 32 MNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAK 91 M A D +V + P + ++ +D M +V +VLQ F A Sbjct: 1 MVTPAKARPGTREDRDVGEDAAADTP--WVTIVWDDPVNLMTYVTYVLQKLFGYTEPHAT 58 Query: 92 CIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYS 124 +ML+VH++G + E E V+++ Sbjct: 59 KLMLQVHNEGKAVVSAGSRESMETDVSRLHAAG 91 >gi|170782479|ref|YP_001710812.1| atp-dependent Clp protease adaptor protein ClpS [Clavibacter michiganensis subsp. sepedonicus] gi|169157048|emb|CAQ02221.1| atp-dependent Clp protease adaptor protein ClpS [Clavibacter michiganensis subsp. sepedonicus] Length = 124 Score = 61.4 bits (148), Expect = 4e-08, Method: Composition-based stats. Identities = 22/102 (21%), Positives = 39/102 (38%), Gaps = 6/102 (5%) Query: 36 GIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIML 95 G S+ + P ++ ++ ND M +V +V +++F E A +ML Sbjct: 26 GDPGSGTSTGSDTSLLERASTPPVWSCVVWNDPVNLMTYVSYVFRSYFGFTRERADELML 85 Query: 96 KVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +VH G E E V+ H + L +E+ Sbjct: 86 RVHEDGRAVVATGIREEIE---RHVLAM---HGFGLWATLER 121 >gi|227495764|ref|ZP_03926075.1| ATP-dependent Clp protease adaptor protein ClpS [Actinomyces urogenitalis DSM 15434] gi|226834693|gb|EEH67076.1| ATP-dependent Clp protease adaptor protein ClpS [Actinomyces urogenitalis DSM 15434] Length = 109 Score = 61.0 bits (147), Expect = 5e-08, Method: Composition-based stats. Identities = 19/92 (20%), Positives = 39/92 (42%), Gaps = 6/92 (6%) Query: 46 SEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGEC 105 + R S + + +R ++ +D M++V+ V +++F A M++VH G Sbjct: 10 PDTREDSATQRLERWRTVVHDDPVNTMDYVVWVFRSYFRFPLSLAHQRMMQVHTTGRAIV 69 Query: 106 GVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 E E+ V + +Y L+ +E Sbjct: 70 SRGPRERMEVDVTAMHSYG------LRATIEP 95 >gi|33241103|ref|NP_876045.1| ATP-dependent Clp protease adaptor protein ClpS [Prochlorococcus marinus subsp. marinus str. CCMP1375] gi|33238633|gb|AAQ00698.1| Uncharacterized conserved protein [Prochlorococcus marinus subsp. marinus str. CCMP1375] Length = 103 Score = 61.0 bits (147), Expect = 6e-08, Method: Composition-based stats. Identities = 20/84 (23%), Positives = 32/84 (38%), Gaps = 1/84 (1%) Query: 32 MNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFF-YKDHETA 90 M + + + Y+VLL ND M++V+ L+ + A Sbjct: 1 MVGNPGRGPGGAAVVDKQTERVRKTSPRYKVLLHNDPVNTMDYVVTTLRQVVPQLSEQDA 60 Query: 91 KCIMLKVHHQGIGECGVYAYEIAE 114 +ML+ H+ GIG E AE Sbjct: 61 MAVMLETHNTGIGLVITCDLEPAE 84 >gi|239930995|ref|ZP_04687948.1| ATP-dependent Clp protease adaptor protein ClpS [Streptomyces ghanaensis ATCC 14672] Length = 102 Score = 61.0 bits (147), Expect = 6e-08, Method: Composition-based stats. Identities = 30/107 (28%), Positives = 44/107 (41%), Gaps = 9/107 (8%) Query: 32 MNKKGIAEFDNCLDSEVRFSSKVRVPKLYRV-LLVNDNYTPMEFVIHVLQNFFYKDHETA 90 M E + +E F+ V P + V ++ ND M +V +V Q +F + A Sbjct: 1 MTSPAPLEIERTESAEEVFA--VPEPDVPWVTIVHNDPVNLMSYVTYVFQTYFGYSKDKA 58 Query: 91 KCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 +ML VHH+G E E V Q M H Y L ++Q Sbjct: 59 TKLMLDVHHKGRAIVSSGTREEMERDV-QAM-----HGYGLWATLQQ 99 >gi|323359749|ref|YP_004226145.1| hypothetical protein MTES_3301 [Microbacterium testaceum StLB037] gi|323276120|dbj|BAJ76265.1| uncharacterized conserved protein [Microbacterium testaceum StLB037] Length = 102 Score = 60.6 bits (146), Expect = 6e-08, Method: Composition-based stats. Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 6/83 (7%) Query: 56 VPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEM 115 P ++ ++ ND M +V HV + +F D TA+ +ML VHH G E Sbjct: 24 PPSSWQTVVWNDPVNLMSYVSHVFRTYFGFDSATAERLMLAVHHDGHAVVARGPRE---- 79 Query: 116 KVNQVMNYSRQHQYPLQCIMEQK 138 V + ++ H Y L + ++ Sbjct: 80 -VMEAHTHA-MHDYGLWATVRKE 100 >gi|271963261|ref|YP_003337457.1| hypothetical protein Sros_1723 [Streptosporangium roseum DSM 43021] gi|270506436|gb|ACZ84714.1| conserved hypothetical protein [Streptosporangium roseum DSM 43021] Length = 95 Score = 60.6 bits (146), Expect = 7e-08, Method: Composition-based stats. Identities = 22/77 (28%), Positives = 33/77 (42%) Query: 48 VRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGV 107 R S VR + ++ ND M +V +V Q+ F E A+ +ML VH +G Sbjct: 10 ERPSIDVRPDLPWLTIVWNDPVNLMSYVTYVFQSVFGYSKEKAEKLMLDVHQKGRAVVSS 69 Query: 108 YAYEIAEMKVNQVMNYS 124 E E V + +Y Sbjct: 70 GTREEMERDVQIMHSYG 86 >gi|291439367|ref|ZP_06578757.1| ATP-dependent Clp protease adaptor protein ClpS [Streptomyces ghanaensis ATCC 14672] gi|291342262|gb|EFE69218.1| ATP-dependent Clp protease adaptor protein ClpS [Streptomyces ghanaensis ATCC 14672] Length = 105 Score = 60.6 bits (146), Expect = 7e-08, Method: Composition-based stats. Identities = 23/75 (30%), Positives = 33/75 (44%), Gaps = 6/75 (8%) Query: 63 LLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMN 122 ++ ND M +V +V Q +F + A +ML VHH+G E E V Q M Sbjct: 34 IVHNDPVNLMSYVTYVFQTYFGYSKDKATKLMLDVHHKGRAIVSSGTREEMERDV-QAM- 91 Query: 123 YSRQHQYPLQCIMEQ 137 H Y L ++Q Sbjct: 92 ----HGYGLWATLQQ 102 >gi|269795793|ref|YP_003315248.1| hypothetical protein Sked_25090 [Sanguibacter keddieii DSM 10542] gi|269097978|gb|ACZ22414.1| uncharacterized conserved protein [Sanguibacter keddieii DSM 10542] Length = 97 Score = 60.6 bits (146), Expect = 7e-08, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 37/78 (47%) Query: 47 EVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECG 106 E R + V + + L+ ND T M +V++V +++F A +M++VH +G Sbjct: 10 EERQDTAASVGEPWVTLVWNDPVTTMNYVVYVFESYFGFSERHAHRLMMQVHSEGKAVVS 69 Query: 107 VYAYEIAEMKVNQVMNYS 124 E EM V + ++ Sbjct: 70 TGGREKVEMDVQAMHSFG 87 >gi|78185599|ref|YP_378033.1| ATP-dependent Clp protease adaptor protein ClpS [Synechococcus sp. CC9902] gi|123580669|sp|Q3AUR5|CLPS_SYNS9 RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|78169893|gb|ABB26990.1| conserved hypothetical protein [Synechococcus sp. CC9902] Length = 104 Score = 60.6 bits (146), Expect = 7e-08, Method: Composition-based stats. Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 1/61 (1%) Query: 55 RVPKLYRVLLVNDNYTPMEFVIHVLQNFF-YKDHETAKCIMLKVHHQGIGECGVYAYEIA 113 + Y+VLL ND ME+V+ L+ + A +ML+ H+ G+G V E A Sbjct: 25 KRSPRYKVLLHNDPVNSMEYVMTTLRQVVPQLSEQDAMAVMLEAHNTGVGLVIVCDIEPA 84 Query: 114 E 114 E Sbjct: 85 E 85 >gi|29831702|ref|NP_826336.1| ATP-dependent Clp protease adaptor protein ClpS [Streptomyces avermitilis MA-4680] gi|37076982|sp|Q82D28|CLPS_STRAW RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|29608818|dbj|BAC72871.1| putative ATP-dependent Clp protease adaptor protein [Streptomyces avermitilis MA-4680] Length = 105 Score = 60.6 bits (146), Expect = 8e-08, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 27/62 (43%) Query: 63 LLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMN 122 ++ ND M +V +V Q +F + A +ML VHH+G E E V + Sbjct: 34 IVHNDPVNLMSYVTYVFQTYFGYSKDKATKLMLDVHHKGRAVVSSGTREEMERDVQAMHG 93 Query: 123 YS 124 Y Sbjct: 94 YG 95 >gi|169628566|ref|YP_001702215.1| ATP-dependent Clp protease adaptor protein ClpS [Mycobacterium abscessus ATCC 19977] gi|169240533|emb|CAM61561.1| Probable ATP-dependent Clp protease adaptor protein ClpS [Mycobacterium abscessus] Length = 100 Score = 60.6 bits (146), Expect = 8e-08, Method: Composition-based stats. Identities = 21/93 (22%), Positives = 37/93 (39%), Gaps = 2/93 (2%) Query: 32 MNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAK 91 M A + V + + P + ++ +D M +V +V Q F A Sbjct: 1 MGAPARALPGTTAERSVEHVDETQSP--WVTIVWDDPVNLMNYVAYVFQQLFGYSETEAT 58 Query: 92 CIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYS 124 +ML+VHH+G A E E+ V+++ Sbjct: 59 NLMLQVHHEGKAVVSCGARESMEIDVSKLHAAG 91 >gi|302551734|ref|ZP_07304076.1| ATP-dependent Clp protease adaptor protein ClpS [Streptomyces viridochromogenes DSM 40736] gi|302469352|gb|EFL32445.1| ATP-dependent Clp protease adaptor protein ClpS [Streptomyces viridochromogenes DSM 40736] Length = 105 Score = 60.2 bits (145), Expect = 8e-08, Method: Composition-based stats. Identities = 23/75 (30%), Positives = 34/75 (45%), Gaps = 6/75 (8%) Query: 63 LLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMN 122 ++ ND M +V +V Q +F + A +ML VHH+G + E E V Q M Sbjct: 34 IVHNDPVNLMSYVTYVFQTYFGYSKDKATKLMLDVHHKGRAVVSSGSREEMERDV-QAM- 91 Query: 123 YSRQHQYPLQCIMEQ 137 H Y L ++Q Sbjct: 92 ----HGYGLWATLQQ 102 >gi|78211862|ref|YP_380641.1| ATP-dependent Clp protease adaptor protein ClpS [Synechococcus sp. CC9605] gi|78196321|gb|ABB34086.1| conserved hypothetical protein [Synechococcus sp. CC9605] Length = 106 Score = 60.2 bits (145), Expect = 8e-08, Method: Composition-based stats. Identities = 26/91 (28%), Positives = 39/91 (42%), Gaps = 6/91 (6%) Query: 25 IFMADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFF- 83 + +S K G A + +VR + Y+VLL ND ME+V+ LQ Sbjct: 2 VMAVESPSQKPGGAAVLDKAPEKVR-----KRSPRYKVLLHNDPVNSMEYVVATLQQVVP 56 Query: 84 YKDHETAKCIMLKVHHQGIGECGVYAYEIAE 114 + +ML+ H+ G+G V E AE Sbjct: 57 QLSEQDCMAVMLEAHNTGVGLVIVCDIEPAE 87 >gi|161353432|ref|NP_898239.2| ATP-dependent Clp protease adaptor protein ClpS [Synechococcus sp. WH 8102] Length = 106 Score = 60.2 bits (145), Expect = 9e-08, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 1/61 (1%) Query: 55 RVPKLYRVLLVNDNYTPMEFVIHVLQNFF-YKDHETAKCIMLKVHHQGIGECGVYAYEIA 113 + Y+VLL ND ME+V+ L+ + A +M++ H+ G+G V E A Sbjct: 27 KQSPRYKVLLHNDPVNTMEYVVTTLRQVVPQLSEQDAMAVMIEAHNTGVGLVIVCDLEPA 86 Query: 114 E 114 E Sbjct: 87 E 87 >gi|168704346|ref|ZP_02736623.1| ATP-dependent Clp protease adaptor protein ClpS [Gemmata obscuriglobus UQM 2246] Length = 108 Score = 60.2 bits (145), Expect = 9e-08, Method: Composition-based stats. Identities = 21/88 (23%), Positives = 39/88 (44%) Query: 37 IAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLK 96 ++ +++V + R Y V+L+ND+ E+VI +L+ F E + Sbjct: 1 MSGPTTLPETDVETEQRTRRQPPYHVVLLNDDDHSYEYVIEMLKALFGHPVEKGFLLARL 60 Query: 97 VHHQGIGECGVYAYEIAEMKVNQVMNYS 124 V +G + E AE+K +Q+ Y Sbjct: 61 VDTEGRAIVCTTSLERAELKRDQIHAYG 88 >gi|220908775|ref|YP_002484086.1| ATP-dependent Clp protease adaptor protein ClpS [Cyanothece sp. PCC 7425] gi|219865386|gb|ACL45725.1| ATP-dependent Clp protease adaptor protein ClpS [Cyanothece sp. PCC 7425] Length = 93 Score = 60.2 bits (145), Expect = 9e-08, Method: Composition-based stats. Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 1/73 (1%) Query: 43 CLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHV-LQNFFYKDHETAKCIMLKVHHQG 101 +++ + S+ ++ YRVLL ND+ ME V+ V L+ A IM++ H G Sbjct: 2 AVETIEQRSTVRKLAPRYRVLLHNDDVNSMEHVVEVLLKTVPSLTQPQAVDIMMEAHVNG 61 Query: 102 IGECGVYAYEIAE 114 I A E AE Sbjct: 62 IALVITCALEHAE 74 >gi|219113493|ref|XP_002186330.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|209583180|gb|ACI65800.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 161 Score = 60.2 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 20/100 (20%), Positives = 35/100 (35%), Gaps = 9/100 (9%) Query: 25 IFMADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKL---------YRVLLVNDNYTPMEFV 75 M+ + + ++ + + ++V P + V + ND E V Sbjct: 42 ARMSPATIERESVKVGAPAVLDRPAEKTRVDEPVKERKGMGHEAWEVRIYNDGLNTREHV 101 Query: 76 IHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEM 115 L A M++ H GI G + YE+AEM Sbjct: 102 ARSLVQVTGMSEMEAYQTMMQAHQNGIAVVGRWVYEVAEM 141 >gi|134097791|ref|YP_001103452.1| ATP-dependent Clp protease adaptor protein ClpS [Saccharopolyspora erythraea NRRL 2338] gi|291005573|ref|ZP_06563546.1| ATP-dependent Clp protease adaptor protein ClpS [Saccharopolyspora erythraea NRRL 2338] gi|133910414|emb|CAM00527.1| ATP-dependent Clp protease adaptor protein ClpS [Saccharopolyspora erythraea NRRL 2338] Length = 97 Score = 59.8 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 21/80 (26%), Positives = 34/80 (42%), Gaps = 6/80 (7%) Query: 58 KLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKV 117 K + ++ ND M +V +VLQ F + A +ML VHH+G + E E V Sbjct: 22 KPWVTVVWNDPVNLMSYVTYVLQKIFGYSKDHATKLMLDVHHKGRAAVSSGSKEKVEGDV 81 Query: 118 NQVMNYSRQHQYPLQCIMEQ 137 ++ L M++ Sbjct: 82 AKLHAAG------LWATMQK 95 >gi|313142600|ref|ZP_07804793.1| ERD1 protein [Helicobacter canadensis MIT 98-5491] gi|313131631|gb|EFR49248.1| ERD1 protein [Helicobacter canadensis MIT 98-5491] Length = 35 Score = 59.8 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 15/34 (44%), Positives = 24/34 (70%) Query: 104 ECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 CG+Y Y+IAE K QV +++ Q+PL+ I+E+ Sbjct: 1 MCGIYPYDIAETKAMQVRKMAKEKQFPLRAILEK 34 >gi|116072120|ref|ZP_01469388.1| ATP-dependent Clp protease adaptor protein ClpS [Synechococcus sp. BL107] gi|116065743|gb|EAU71501.1| ATP-dependent Clp protease adaptor protein ClpS [Synechococcus sp. BL107] Length = 104 Score = 59.8 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 1/61 (1%) Query: 55 RVPKLYRVLLVNDNYTPMEFVIHVLQNFF-YKDHETAKCIMLKVHHQGIGECGVYAYEIA 113 + Y+VLL ND ME+V+ L+ + A +ML+ H+ GIG V E A Sbjct: 25 KRSPRYKVLLHNDPVNSMEYVMATLRQVVPQLSEQDAMAVMLEAHNTGIGLVIVCDIEPA 84 Query: 114 E 114 E Sbjct: 85 E 85 >gi|311743607|ref|ZP_07717413.1| ATP-dependent Clp protease adaptor protein ClpS [Aeromicrobium marinum DSM 15272] gi|311312737|gb|EFQ82648.1| ATP-dependent Clp protease adaptor protein ClpS [Aeromicrobium marinum DSM 15272] Length = 101 Score = 59.8 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 23/93 (24%), Positives = 39/93 (41%), Gaps = 2/93 (2%) Query: 32 MNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAK 91 M+ + EV + ++ P + ++ ND M +V +V +N+F E A Sbjct: 1 MDGVTRTAPVEHREPEVDEAVELEAP--WVTIVWNDPVNLMSYVSYVFRNYFGYTDEKAT 58 Query: 92 CIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYS 124 +ML VHH+G + E E V + Y Sbjct: 59 ELMLAVHHEGKAVVSTGSREQMERHVQAMHEYG 91 >gi|254385759|ref|ZP_05001080.1| ATP-dependent Clp protease adapter protein clpS [Streptomyces sp. Mg1] gi|194344625|gb|EDX25591.1| ATP-dependent Clp protease adapter protein clpS [Streptomyces sp. Mg1] Length = 104 Score = 59.8 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 24/94 (25%), Positives = 37/94 (39%), Gaps = 1/94 (1%) Query: 32 MNKKGIAEFDNCLDSEVRFSSKVRVPKLYRV-LLVNDNYTPMEFVIHVLQNFFYKDHETA 90 M + +A + + V P + V L+ ND M +V +V Q +F + A Sbjct: 1 MGQVSVAPIEIERTESAEETYAVPEPDVPWVTLVHNDPVNLMSYVTYVFQAYFGYSKDKA 60 Query: 91 KCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYS 124 +ML VHH+G E E V + Y Sbjct: 61 HKLMLDVHHKGRAVVSSGTREEMERDVQAMHGYG 94 >gi|159036636|ref|YP_001535889.1| ATP-dependent Clp protease adaptor protein ClpS [Salinispora arenicola CNS-205] gi|157915471|gb|ABV96898.1| ATP-dependent Clp protease adaptor protein ClpS [Salinispora arenicola CNS-205] Length = 96 Score = 59.8 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 21/79 (26%), Positives = 35/79 (44%), Gaps = 1/79 (1%) Query: 47 EVRFSSKVRVP-KLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGEC 105 E + +V P + + ++ +D M +V V Q F E A+ +ML VHH+G Sbjct: 10 ETPDTDEVPAPDRPWVTIVWDDPVNLMTYVTWVFQKLFGYSRERAEQLMLDVHHKGRAVV 69 Query: 106 GVYAYEIAEMKVNQVMNYS 124 + E E +Q+ Y Sbjct: 70 TSGSRERMEHDASQLHAYG 88 >gi|302560427|ref|ZP_07312769.1| ATP-dependent Clp protease adaptor protein ClpS [Streptomyces griseoflavus Tu4000] gi|302478045|gb|EFL41138.1| ATP-dependent Clp protease adaptor protein ClpS [Streptomyces griseoflavus Tu4000] Length = 105 Score = 59.8 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 28/62 (45%) Query: 63 LLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMN 122 ++ ND M +V +V Q++F + A +ML VHH+G E E V + Sbjct: 34 IVHNDPVNLMSYVTYVFQSYFGYSKDKATKLMLDVHHKGRAVVSSGTREEMERDVQAMHG 93 Query: 123 YS 124 Y Sbjct: 94 YG 95 >gi|325963805|ref|YP_004241711.1| hypothetical protein Asphe3_24470 [Arthrobacter phenanthrenivorans Sphe3] gi|323469892|gb|ADX73577.1| uncharacterized conserved protein [Arthrobacter phenanthrenivorans Sphe3] Length = 127 Score = 59.8 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 19/101 (18%), Positives = 39/101 (38%), Gaps = 8/101 (7%) Query: 38 AEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKV 97 + + S + +++ ND M +V +V Q++F A +M++V Sbjct: 11 TQEGTRTGTVESTDSLTAPDIPWNLVIWNDPVNLMSYVSYVFQSYFGYSESKANKLMMEV 70 Query: 98 HHQGIGECGVYAYEIAEMKVNQVMNYSRQ-HQYPLQCIMEQ 137 H +G + E QV ++ H + L +E+ Sbjct: 71 HKKGRSIVASGSKE-------QVERHAVAMHGFGLWATVEK 104 >gi|294629594|ref|ZP_06708154.1| ATP-dependent Clp protease adaptor protein ClpS [Streptomyces sp. e14] gi|292832927|gb|EFF91276.1| ATP-dependent Clp protease adaptor protein ClpS [Streptomyces sp. e14] Length = 105 Score = 59.8 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 23/75 (30%), Positives = 34/75 (45%), Gaps = 6/75 (8%) Query: 63 LLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMN 122 ++ ND M +V +V Q +F + A +ML VHH+G + E E V Q M Sbjct: 34 IVHNDPVNLMSYVTYVFQTYFGYSKDKATKLMLDVHHKGRAVVSSGSREEMERDV-QAM- 91 Query: 123 YSRQHQYPLQCIMEQ 137 H Y L ++Q Sbjct: 92 ----HGYGLWATLQQ 102 >gi|297200007|ref|ZP_06917404.1| ATP-dependent Clp protease adaptor protein ClpS [Streptomyces sviceus ATCC 29083] gi|197710480|gb|EDY54514.1| ATP-dependent Clp protease adaptor protein ClpS [Streptomyces sviceus ATCC 29083] Length = 105 Score = 59.8 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 23/75 (30%), Positives = 34/75 (45%), Gaps = 6/75 (8%) Query: 63 LLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMN 122 ++ ND M +V +V Q +F + A +ML VHH+G + E E V Q M Sbjct: 34 IVHNDPVNLMSYVTYVFQTYFGYSKDKATKLMLDVHHKGRAVVSSGSREEMERDV-QAM- 91 Query: 123 YSRQHQYPLQCIMEQ 137 H Y L ++Q Sbjct: 92 ----HGYGLWATLQQ 102 >gi|119960571|ref|YP_948295.1| ATP-dependent Clp protease adaptor protein clpS [Arthrobacter aurescens TC1] gi|119947430|gb|ABM06341.1| ATP-dependent Clp protease adaptor protein clpS [Arthrobacter aurescens TC1] Length = 120 Score = 59.8 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 21/103 (20%), Positives = 43/103 (41%), Gaps = 10/103 (9%) Query: 38 AEFDNCLDSEVRFSSKV--RVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIML 95 + D + + S+ V + +++ ND M +V +V Q++F A +M+ Sbjct: 9 TDIDERTKAAEQSSTDVLTAPDIPWNLVIWNDPVNLMSYVSYVFQSYFGYSESKAHKLMM 68 Query: 96 KVHHQGIGECGVYAYEIAEMKVNQVMNYSRQ-HQYPLQCIMEQ 137 +VH +G + E QV ++ H + L +E+ Sbjct: 69 EVHKKGRSIVAHGSKE-------QVEQHAVAMHGFGLWATVEK 104 >gi|220913062|ref|YP_002488371.1| ATP-dependent Clp protease adaptor protein ClpS [Arthrobacter chlorophenolicus A6] gi|219859940|gb|ACL40282.1| ATP-dependent Clp protease adaptor protein ClpS [Arthrobacter chlorophenolicus A6] Length = 120 Score = 59.8 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 18/101 (17%), Positives = 39/101 (38%), Gaps = 8/101 (7%) Query: 38 AEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKV 97 + + + + +++ ND M +V +V Q++F A +M++V Sbjct: 11 TQEGTRTGTAESTDTLAAPDIPWNLVIWNDPVNLMSYVSYVFQSYFGYSEAKANKLMMEV 70 Query: 98 HHQGIGECGVYAYEIAEMKVNQVMNYSRQ-HQYPLQCIMEQ 137 H +G + E QV ++ H + L +E+ Sbjct: 71 HKKGRSIVTHGSKE-------QVERHAVAMHGFGLWATVEK 104 >gi|22297755|ref|NP_681002.1| ATP-dependent Clp protease adaptor protein ClpS [Thermosynechococcus elongatus BP-1] gi|22293932|dbj|BAC07764.1| tll0211 [Thermosynechococcus elongatus BP-1] Length = 99 Score = 59.8 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 1/73 (1%) Query: 43 CLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHV-LQNFFYKDHETAKCIMLKVHHQG 101 + + + ++ ++ YRVLL NDN ME+V+ V L+ A IM++ H G Sbjct: 8 SVQTIEKPATVRKLAPRYRVLLHNDNVNSMEYVVEVLLKTVPSLTQPQAVDIMMEAHLTG 67 Query: 102 IGECGVYAYEIAE 114 + A E AE Sbjct: 68 VALVITCALEHAE 80 >gi|86739577|ref|YP_479977.1| ATP-dependent Clp protease adaptor protein ClpS [Frankia sp. CcI3] gi|86566439|gb|ABD10248.1| ATP-dependent Clp protease adaptor protein ClpS [Frankia sp. CcI3] Length = 119 Score = 59.4 bits (143), Expect = 1e-07, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 28/67 (41%) Query: 58 KLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKV 117 + + ++ ND M +V +V Q F A +ML VHH+G V E E Sbjct: 45 RPWVTIVWNDPINLMSYVTYVFQKLFGYSKPKATKLMLDVHHKGRASVAVGTREEMEADA 104 Query: 118 NQVMNYS 124 ++ Y Sbjct: 105 ERLHAYG 111 >gi|239981994|ref|ZP_04704518.1| ATP-dependent Clp protease adaptor protein ClpS [Streptomyces albus J1074] gi|291453845|ref|ZP_06593235.1| ATP-dependent Clp protease adapter protein clpS [Streptomyces albus J1074] gi|291356794|gb|EFE83696.1| ATP-dependent Clp protease adapter protein clpS [Streptomyces albus J1074] Length = 99 Score = 59.4 bits (143), Expect = 1e-07, Method: Composition-based stats. Identities = 29/85 (34%), Positives = 38/85 (44%), Gaps = 7/85 (8%) Query: 54 VRVPKLYRV-LLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEI 112 V P L V L+ ND M +V +V Q +F E A +ML VHH+G + E Sbjct: 18 VPEPDLPWVTLVHNDPVNLMSYVAYVFQAYFGYSKEKANKLMLDVHHKGRAVVSSGSREE 77 Query: 113 AEMKVNQVMNYSRQHQYPLQCIMEQ 137 E V Q M H Y L ++Q Sbjct: 78 MERDV-QAM-----HGYGLWATLQQ 96 >gi|307329937|ref|ZP_07609090.1| ATP-dependent Clp protease adaptor protein ClpS [Streptomyces violaceusniger Tu 4113] gi|306884428|gb|EFN15461.1| ATP-dependent Clp protease adaptor protein ClpS [Streptomyces violaceusniger Tu 4113] Length = 103 Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 8/95 (8%) Query: 46 SEVRFSSK-VRVPKLYRV-LLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIG 103 E R + V P + V ++ ND M +V +V Q++F + A +ML VHH+G Sbjct: 14 PETREAPMSVPEPDVPWVTVVHNDPVNLMSYVTYVFQSYFGYPKDKAHRLMLDVHHKGRA 73 Query: 104 ECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 + E E V Q M H Y L ++Q+ Sbjct: 74 IVSSGSREEMERDV-QAM-----HGYGLWATLQQE 102 >gi|238063125|ref|ZP_04607834.1| ATP-dependent Clp protease adaptor protein clpS [Micromonospora sp. ATCC 39149] gi|237884936|gb|EEP73764.1| ATP-dependent Clp protease adaptor protein clpS [Micromonospora sp. ATCC 39149] Length = 96 Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 21/80 (26%), Positives = 35/80 (43%), Gaps = 6/80 (7%) Query: 58 KLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKV 117 + + ++ +D M +V V Q F E A+ +ML VHH+G A E E Sbjct: 22 RPWVTIVWDDPVNLMSYVTWVFQKLFGYSRERAEKLMLDVHHKGRAVVSTGARERME--- 78 Query: 118 NQVMNYSRQHQYPLQCIMEQ 137 + ++ H Y L +E+ Sbjct: 79 ---HDAAQLHAYGLWATVER 95 >gi|254446082|ref|ZP_05059558.1| ATP-dependent Clp protease adaptor protein ClpS [Verrucomicrobiae bacterium DG1235] gi|198260390|gb|EDY84698.1| ATP-dependent Clp protease adaptor protein ClpS [Verrucomicrobiae bacterium DG1235] Length = 98 Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 18/77 (23%), Positives = 33/77 (42%) Query: 46 SEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGEC 105 +E + + ++ V+++ND M +V VL+ A+ M++VH +G Sbjct: 9 AETETKDETALSDVWGVIVLNDPVNLMSYVTMVLERVLRMSRSKAEEHMMEVHQKGRSLV 68 Query: 106 GVYAYEIAEMKVNQVMN 122 E AE V Q+ Sbjct: 69 WKGNREKAEGYVYQLQE 85 >gi|282865136|ref|ZP_06274189.1| ATP-dependent Clp protease adaptor protein ClpS [Streptomyces sp. ACTE] gi|282560059|gb|EFB65608.1| ATP-dependent Clp protease adaptor protein ClpS [Streptomyces sp. ACTE] Length = 105 Score = 59.0 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 24/95 (25%), Positives = 37/95 (38%), Gaps = 2/95 (2%) Query: 32 MNKKGIAEFDNCLDSEVRFSS-KVRVPKLYRV-LLVNDNYTPMEFVIHVLQNFFYKDHET 89 M + +A E + V P + V L+ ND M +V +V Q +F + Sbjct: 1 MGRVSVASPVEIERPESAEETYTVPEPDVPWVTLVHNDPVNLMSYVTYVFQAYFGYSKDK 60 Query: 90 AKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYS 124 A +ML VH +G + E E V + Y Sbjct: 61 AHKLMLDVHQKGRAVVSSGSREEMERDVQAMHGYG 95 >gi|116671131|ref|YP_832064.1| ATP-dependent Clp protease adaptor protein ClpS [Arthrobacter sp. FB24] gi|116611240|gb|ABK03964.1| ATP-dependent Clp protease adaptor protein ClpS [Arthrobacter sp. FB24] Length = 122 Score = 59.0 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 18/101 (17%), Positives = 38/101 (37%), Gaps = 8/101 (7%) Query: 38 AEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKV 97 + + + +++ ND M +V +V Q++F A +M++V Sbjct: 11 TRESTQTGTVTSTDALTAPDIPWNLVIWNDPVNLMSYVSYVFQSYFGYSEPKANKLMMEV 70 Query: 98 HHQGIGECGVYAYEIAEMKVNQVMNYSRQ-HQYPLQCIMEQ 137 H +G + E QV ++ H + L +E+ Sbjct: 71 HKKGRSIVAHGSKE-------QVEQHAVAMHGFGLWATVEK 104 >gi|328882719|emb|CCA55958.1| ATP-dependent Clp protease adaptor protein ClpS [Streptomyces venezuelae ATCC 10712] Length = 101 Score = 58.7 bits (141), Expect = 2e-07, Method: Composition-based stats. Identities = 21/81 (25%), Positives = 34/81 (41%) Query: 44 LDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIG 103 +S S+ V + L+ ND M +V +V Q++F + A +ML VH++G Sbjct: 11 TESAEEVSAVVEPDVPWVTLVHNDPVNLMSYVTYVFQSYFGYSKDKAHKLMLDVHNKGRA 70 Query: 104 ECGVYAYEIAEMKVNQVMNYS 124 E E V + Y Sbjct: 71 VVSSGTREEMERDVQAMHGYG 91 >gi|330466047|ref|YP_004403790.1| ATP-dependent clp protease adaptor protein clps [Verrucosispora maris AB-18-032] gi|328809018|gb|AEB43190.1| ATP-dependent clp protease adaptor protein clps [Verrucosispora maris AB-18-032] Length = 96 Score = 58.7 bits (141), Expect = 2e-07, Method: Composition-based stats. Identities = 19/67 (28%), Positives = 29/67 (43%) Query: 58 KLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKV 117 + + ++ +D M +V V Q F E A+ +ML VHH+G A E E Sbjct: 22 RPWVTIVWDDPVNLMSYVTWVFQKLFGYSREKAEQLMLDVHHKGKAVVSSGARERMEHDA 81 Query: 118 NQVMNYS 124 Q+ Y Sbjct: 82 AQLHAYG 88 >gi|16331021|ref|NP_441749.1| ATP-dependent Clp protease adaptor protein ClpS [Synechocystis sp. PCC 6803] gi|1653516|dbj|BAA18429.1| ssr2723 [Synechocystis sp. PCC 6803] Length = 96 Score = 58.7 bits (141), Expect = 2e-07, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 26/58 (44%), Gaps = 1/58 (1%) Query: 58 KLYRVLLVNDNYTPMEFVIHVL-QNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAE 114 YRVLL ND++ ME V+ L Q A IM++ H G+ E AE Sbjct: 20 PRYRVLLHNDDFNSMEHVVQTLIQTVAGMTQPQAVDIMMEAHFNGMSLVITCELEHAE 77 >gi|320095957|ref|ZP_08027575.1| ATP-dependent Clp protease adaptor protein ClpS [Actinomyces sp. oral taxon 178 str. F0338] gi|319977114|gb|EFW08839.1| ATP-dependent Clp protease adaptor protein ClpS [Actinomyces sp. oral taxon 178 str. F0338] Length = 107 Score = 58.7 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 19/80 (23%), Positives = 31/80 (38%), Gaps = 6/80 (7%) Query: 58 KLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKV 117 +++ ++ +D M +V VLQ F A +M++VH G E E V Sbjct: 26 PVWQAVVWDDPVNLMGYVTAVLQRHFGYSRARAHELMMRVHTTGRAVVNSGPRERIEADV 85 Query: 118 NQVMNYSRQHQYPLQCIMEQ 137 + Y L+ ME Sbjct: 86 VALHTYG------LRATMEP 99 >gi|297160086|gb|ADI09798.1| ATP-dependent Clp protease adaptor protein ClpS [Streptomyces bingchenggensis BCW-1] Length = 95 Score = 58.7 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 23/75 (30%), Positives = 34/75 (45%), Gaps = 6/75 (8%) Query: 63 LLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMN 122 ++ ND M +V +V Q +F + A +ML VHH+G + E E V Q M Sbjct: 25 VVHNDPVNLMSYVTYVFQAYFGYSKDKAHRLMLDVHHKGRAVVSSGSREEMERDV-QAM- 82 Query: 123 YSRQHQYPLQCIMEQ 137 H Y L ++Q Sbjct: 83 ----HGYGLWATLQQ 93 >gi|296268919|ref|YP_003651551.1| ATP-dependent Clp protease adaptor protein ClpS [Thermobispora bispora DSM 43833] gi|296091706|gb|ADG87658.1| ATP-dependent Clp protease adaptor protein ClpS [Thermobispora bispora DSM 43833] Length = 95 Score = 58.7 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 21/77 (27%), Positives = 33/77 (42%) Query: 48 VRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGV 107 +R SS VR + + ++ ND M +V +V Q F A+ +M+ VH G Sbjct: 10 IRESSDVRSDRPWLTIVWNDPVNLMSYVTYVFQKVFGYPRPKAEKLMMDVHCNGKAVVAS 69 Query: 108 YAYEIAEMKVNQVMNYS 124 E E V + +Y Sbjct: 70 GTREEMERNVQILHSYG 86 >gi|317508765|ref|ZP_07966415.1| ATP-dependent Clp protease adaptor protein ClpS [Segniliparus rugosus ATCC BAA-974] gi|316252928|gb|EFV12348.1| ATP-dependent Clp protease adaptor protein ClpS [Segniliparus rugosus ATCC BAA-974] Length = 112 Score = 58.7 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 18/79 (22%), Positives = 32/79 (40%), Gaps = 1/79 (1%) Query: 47 EVRFSSKVRVPKL-YRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGEC 105 E + + P L + ++ +D M +V +V Q F A +ML+VH+ G Sbjct: 25 EEQAADSSAEPDLPWMTIVWDDPVNLMRYVTYVFQTVFGYSEAKATELMLRVHNDGKAVV 84 Query: 106 GVYAYEIAEMKVNQVMNYS 124 + E E V ++ Sbjct: 85 SSGSREKVETDVVKLQQAG 103 >gi|21221363|ref|NP_627142.1| ATP-dependent Clp protease adaptor protein ClpS [Streptomyces coelicolor A3(2)] gi|289771355|ref|ZP_06530733.1| ATP-dependent Clp protease adaptor protein ClpS [Streptomyces lividans TK24] gi|5531365|emb|CAB50997.1| conserved hypothetical protein [Streptomyces coelicolor A3(2)] gi|289701554|gb|EFD68983.1| ATP-dependent Clp protease adaptor protein ClpS [Streptomyces lividans TK24] Length = 105 Score = 58.7 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 17/62 (27%), Positives = 29/62 (46%) Query: 63 LLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMN 122 ++ ND M +V +V Q++F + A +M+ VHH+G + E E V + Sbjct: 34 IVHNDPVNLMSYVTYVFQSYFGYSKDKATKLMMDVHHKGRAVVSSGSREEMERDVQAMHG 93 Query: 123 YS 124 Y Sbjct: 94 YG 95 >gi|283780183|ref|YP_003370938.1| ATP-dependent Clp protease adaptor protein ClpS [Pirellula staleyi DSM 6068] gi|283438636|gb|ADB17078.1| ATP-dependent Clp protease adaptor protein ClpS [Pirellula staleyi DSM 6068] Length = 118 Score = 58.7 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 21/95 (22%), Positives = 43/95 (45%), Gaps = 1/95 (1%) Query: 30 SRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHET 89 + +AE + ++++ K + Y V+L ND+ ++VI +++ F Sbjct: 3 EEQRQSAVAEPE-VVEAKPVQKKKPKRQPRYHVILWNDDDHTFDYVIRMMKELFGHPEVK 61 Query: 90 AKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYS 124 K I +V+ +G C E AE+K +Q+ + Sbjct: 62 GKQIADEVNEKGKAICLTTTLEHAELKRDQIHAFG 96 >gi|269955856|ref|YP_003325645.1| ATP-dependent Clp protease adaptor protein ClpS [Xylanimonas cellulosilytica DSM 15894] gi|269304537|gb|ACZ30087.1| ATP-dependent Clp protease adaptor protein ClpS [Xylanimonas cellulosilytica DSM 15894] Length = 106 Score = 58.3 bits (140), Expect = 3e-07, Method: Composition-based stats. Identities = 23/101 (22%), Positives = 43/101 (42%), Gaps = 6/101 (5%) Query: 37 IAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLK 96 A D + E ++ + + ++ ND M +V +V +++F A+ +ML+ Sbjct: 5 TAGPDLRTEHETDTAASTSLADPWVTIVWNDPVNLMTYVTYVFESYFGYPPARARTLMLQ 64 Query: 97 VHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 VH +G E E+ V Q M H + L M++ Sbjct: 65 VHREGRAVVSTGPRERMEVDV-QAM-----HGFGLWATMQR 99 >gi|326334474|ref|ZP_08200685.1| ATP-dependent Clp protease adaptor protein ClpS [Capnocytophaga sp. oral taxon 338 str. F0234] gi|325693243|gb|EGD35171.1| ATP-dependent Clp protease adaptor protein ClpS [Capnocytophaga sp. oral taxon 338 str. F0234] Length = 96 Score = 58.3 bits (140), Expect = 3e-07, Method: Composition-based stats. Identities = 17/75 (22%), Positives = 32/75 (42%) Query: 37 IAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLK 96 + + E + + LY+++L ND+Y ++VI +L +E A+ + Sbjct: 1 MPQTQPTPQQESQEELLTQYADLYQIILYNDDYNTFDYVIDLLMEVCEHTYEQAEQCAMI 60 Query: 97 VHHQGIGECGVYAYE 111 VH+ G YE Sbjct: 61 VHYSGKCPVKEGTYE 75 >gi|145593650|ref|YP_001157947.1| ATP-dependent Clp protease adaptor protein ClpS [Salinispora tropica CNB-440] gi|145302987|gb|ABP53569.1| ATP-dependent Clp protease adaptor protein ClpS [Salinispora tropica CNB-440] Length = 96 Score = 58.3 bits (140), Expect = 3e-07, Method: Composition-based stats. Identities = 20/80 (25%), Positives = 34/80 (42%), Gaps = 1/80 (1%) Query: 46 SEVRFSSKVRVP-KLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGE 104 +E + +V P + + ++ +D M +V V Q F A+ +ML VHH+G Sbjct: 9 AETPDTDEVPAPDRPWVTIVWDDPVNLMAYVTWVFQKLFGYSRGRAEQLMLDVHHKGKAV 68 Query: 105 CGVYAYEIAEMKVNQVMNYS 124 E E +Q+ Y Sbjct: 69 VSSGTRERMEHDASQLHAYG 88 >gi|302534695|ref|ZP_07287037.1| ATP-dependent Clp protease adapter protein clpS [Streptomyces sp. C] gi|302443590|gb|EFL15406.1| ATP-dependent Clp protease adapter protein clpS [Streptomyces sp. C] Length = 104 Score = 58.3 bits (140), Expect = 3e-07, Method: Composition-based stats. Identities = 22/94 (23%), Positives = 37/94 (39%), Gaps = 1/94 (1%) Query: 32 MNKKGIAEFDNCLDSEVRFSSKVRVPKLYRV-LLVNDNYTPMEFVIHVLQNFFYKDHETA 90 M + +A + + V P + V L+ ND M +V +V Q +F + A Sbjct: 1 MGQVSVAPIEIERTESAEETFAVPEPDVPWVTLVHNDPVNLMSYVTYVFQAYFGYPKDKA 60 Query: 91 KCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYS 124 +M+ VH++G E E V + Y Sbjct: 61 TRLMMDVHNKGKAVVSSGTREEMERDVQAMHGYG 94 >gi|318057187|ref|ZP_07975910.1| ATP-dependent Clp protease adaptor protein ClpS [Streptomyces sp. SA3_actG] gi|318079806|ref|ZP_07987138.1| ATP-dependent Clp protease adaptor protein ClpS [Streptomyces sp. SA3_actF] Length = 96 Score = 58.3 bits (140), Expect = 3e-07, Method: Composition-based stats. Identities = 23/75 (30%), Positives = 35/75 (46%), Gaps = 6/75 (8%) Query: 63 LLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMN 122 L+ ND M +V +V Q++F + A +ML VH++G + E E V Q M Sbjct: 25 LVHNDPVNLMSYVTYVFQSYFGYSKDKATKLMLDVHNKGRAVVSSGSREEMERDV-QAM- 82 Query: 123 YSRQHQYPLQCIMEQ 137 H Y L ++Q Sbjct: 83 ----HGYGLWATLQQ 93 >gi|256787457|ref|ZP_05525888.1| ATP-dependent Clp protease adaptor protein ClpS [Streptomyces lividans TK24] gi|12230769|sp|Q9S2G5|CLPS_STRCO RecName: Full=ATP-dependent Clp protease adapter protein ClpS Length = 96 Score = 58.3 bits (140), Expect = 4e-07, Method: Composition-based stats. Identities = 17/62 (27%), Positives = 29/62 (46%) Query: 63 LLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMN 122 ++ ND M +V +V Q++F + A +M+ VHH+G + E E V + Sbjct: 25 IVHNDPVNLMSYVTYVFQSYFGYSKDKATKLMMDVHHKGRAVVSSGSREEMERDVQAMHG 84 Query: 123 YS 124 Y Sbjct: 85 YG 86 >gi|262201899|ref|YP_003273107.1| ATP-dependent Clp protease adaptor protein ClpS [Gordonia bronchialis DSM 43247] gi|262085246|gb|ACY21214.1| ATP-dependent Clp protease adaptor protein ClpS [Gordonia bronchialis DSM 43247] Length = 112 Score = 58.3 bits (140), Expect = 4e-07, Method: Composition-based stats. Identities = 18/105 (17%), Positives = 36/105 (34%), Gaps = 3/105 (2%) Query: 21 LMSFIFMADSRMNKKGIAEFDNCLDSEVRF-SSKVRVPKLYRVLLVNDNYTPMEFVIHVL 79 + + A + D EV ++ + P + ++ +D M +V V Sbjct: 1 MSPDVTRAHEATPGGPGSGGAAVADPEVADGATDLDRPWM--TIVWDDPVNLMRYVTFVF 58 Query: 80 QNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYS 124 Q F A +M++VH +G + E V ++ Sbjct: 59 QKIFGYSESKANQLMMQVHTEGKAVVSSGDRDKVETDVRKLHAAG 103 >gi|290960033|ref|YP_003491215.1| ATP-dependent Clp protease adaptor protein [Streptomyces scabiei 87.22] gi|260649559|emb|CBG72674.1| putative ATP-dependent Clp protease adaptor protein [Streptomyces scabiei 87.22] Length = 105 Score = 58.3 bits (140), Expect = 4e-07, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 28/62 (45%) Query: 63 LLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMN 122 ++ ND M +V +V Q +F E A +ML VHH+G + E E V + Sbjct: 34 IVHNDPVNLMSYVTYVFQAYFGYSKEKANKLMLDVHHKGRAVVSSGSREEMERDVQAMHG 93 Query: 123 YS 124 Y Sbjct: 94 YG 95 >gi|294812860|ref|ZP_06771503.1| ATP-dependent Clp protease adapter protein clpS [Streptomyces clavuligerus ATCC 27064] gi|294325459|gb|EFG07102.1| ATP-dependent Clp protease adapter protein clpS [Streptomyces clavuligerus ATCC 27064] Length = 113 Score = 58.3 bits (140), Expect = 4e-07, Method: Composition-based stats. Identities = 23/99 (23%), Positives = 42/99 (42%), Gaps = 1/99 (1%) Query: 27 MADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRV-LLVNDNYTPMEFVIHVLQNFFYK 85 + M++ +A + + + V P + V L+ ND M +V +V Q +F Sbjct: 5 RSGGSMDQVSVAPTEIERPAPAEETFAVPEPDVPWVTLVHNDPVNLMSYVTYVFQAYFGY 64 Query: 86 DHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYS 124 + A+ +ML VH++G + E E V + Y Sbjct: 65 SKDKARKLMLDVHNKGRAVVSSGSREEMERDVQAMHGYG 103 >gi|288921262|ref|ZP_06415546.1| ATP-dependent Clp protease adaptor protein ClpS [Frankia sp. EUN1f] gi|288347352|gb|EFC81645.1| ATP-dependent Clp protease adaptor protein ClpS [Frankia sp. EUN1f] Length = 96 Score = 57.9 bits (139), Expect = 4e-07, Method: Composition-based stats. Identities = 17/77 (22%), Positives = 29/77 (37%) Query: 48 VRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGV 107 +L+ ++ ND M +V +V + F + A +ML VHH+G Sbjct: 12 EDVEDLPEDERLWVTIVWNDPINLMSYVTYVFRKLFGYSEQKATKLMLDVHHKGRATVTS 71 Query: 108 YAYEIAEMKVNQVMNYS 124 E E ++ Y Sbjct: 72 GTREEMEAAAERLHTYG 88 >gi|302521553|ref|ZP_07273895.1| ATP-dependent Clp protease adaptor protein ClpS [Streptomyces sp. SPB78] gi|302430448|gb|EFL02264.1| ATP-dependent Clp protease adaptor protein ClpS [Streptomyces sp. SPB78] Length = 102 Score = 57.9 bits (139), Expect = 4e-07, Method: Composition-based stats. Identities = 23/75 (30%), Positives = 35/75 (46%), Gaps = 6/75 (8%) Query: 63 LLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMN 122 L+ ND M +V +V Q++F + A +ML VH++G + E E V Q M Sbjct: 31 LVHNDPVNLMSYVTYVFQSYFGYSKDKATKLMLDVHNKGRAVVSSGSREEMERDV-QAM- 88 Query: 123 YSRQHQYPLQCIMEQ 137 H Y L ++Q Sbjct: 89 ----HGYGLWATLQQ 99 >gi|311896234|dbj|BAJ28642.1| putative ATP-dependent Clp protease adaptor protein ClpS [Kitasatospora setae KM-6054] Length = 92 Score = 57.9 bits (139), Expect = 4e-07, Method: Composition-based stats. Identities = 20/79 (25%), Positives = 31/79 (39%) Query: 46 SEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGEC 105 EV + ++ ND M +V HV Q++F E A+ +M+ VH +G Sbjct: 6 PEVEGVPVTEPDTPWVTIVHNDPVNLMSYVQHVFQSYFGYPKEKARRLMMDVHQKGRAVV 65 Query: 106 GVYAYEIAEMKVNQVMNYS 124 E E V + Y Sbjct: 66 SSGTREEMERDVQAMHGYG 84 >gi|297194131|ref|ZP_06911529.1| ATP-dependent Clp protease adapter protein clpS [Streptomyces pristinaespiralis ATCC 25486] gi|197721956|gb|EDY65864.1| ATP-dependent Clp protease adapter protein clpS [Streptomyces pristinaespiralis ATCC 25486] Length = 100 Score = 57.9 bits (139), Expect = 4e-07, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 27/62 (43%) Query: 63 LLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMN 122 L+ ND M +V +V Q +F + A +ML VHH+G E E V + Sbjct: 29 LVHNDPVNLMSYVTYVFQAYFGYSKDKAHKLMLDVHHKGRAVVSSGTREEMERDVQAMHG 88 Query: 123 YS 124 Y Sbjct: 89 YG 90 >gi|113477268|ref|YP_723329.1| ATP-dependent Clp protease adaptor [Trichodesmium erythraeum IMS101] gi|110168316|gb|ABG52856.1| ATP-dependent Clp protease adaptor protein ClpS [Trichodesmium erythraeum IMS101] Length = 116 Score = 57.9 bits (139), Expect = 4e-07, Method: Composition-based stats. Identities = 18/81 (22%), Positives = 33/81 (40%), Gaps = 1/81 (1%) Query: 35 KGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFF-YKDHETAKCI 93 +G A L + + Y+V+++ND+ + V LQ + + A + Sbjct: 17 RGGASSPTTLAPKKDSQVVNKPYPNYKVIVLNDDVNTFKHVAECLQKYIPGMTSDRAWEL 76 Query: 94 MLKVHHQGIGECGVYAYEIAE 114 +VH++G V E AE Sbjct: 77 TYQVHNEGQAIVWVGPLEQAE 97 >gi|325002222|ref|ZP_08123334.1| ATP-dependent Clp protease adaptor protein ClpS [Pseudonocardia sp. P1] Length = 107 Score = 57.9 bits (139), Expect = 4e-07, Method: Composition-based stats. Identities = 19/87 (21%), Positives = 36/87 (41%), Gaps = 2/87 (2%) Query: 38 AEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKV 97 + + ++ P ++ ++ ND M +V +VLQ F +TA +ML V Sbjct: 15 PSPTEQVSPDTDDATSPDTP--WQAIVWNDPVNLMSYVTYVLQKVFDYPEQTANALMLDV 72 Query: 98 HHQGIGECGVYAYEIAEMKVNQVMNYS 124 HH+G + E+ V ++ Sbjct: 73 HHKGKAAVSSGDKDTVEVHVAKLHAAG 99 >gi|111220948|ref|YP_711742.1| ATP-dependent Clp protease adaptor protein ClpS [Frankia alni ACN14a] gi|111148480|emb|CAJ60151.1| ATP-dependent Clp protease adaptor protein clpS [Frankia alni ACN14a] Length = 91 Score = 57.9 bits (139), Expect = 5e-07, Method: Composition-based stats. Identities = 22/93 (23%), Positives = 35/93 (37%), Gaps = 10/93 (10%) Query: 32 MNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAK 91 M+ + E D LD + + + ++ ND M +V +V Q F A Sbjct: 1 MSPVDVEEADETLDDD----------RPWVTIVWNDPINLMSYVTYVFQKLFGYTKSKAT 50 Query: 92 CIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYS 124 +ML VHH+G E E ++ Y Sbjct: 51 ELMLDVHHKGRASVATGTREEMEADAERLHAYG 83 >gi|302865655|ref|YP_003834292.1| ATP-dependent Clp protease adaptor protein ClpS [Micromonospora aurantiaca ATCC 27029] gi|315502219|ref|YP_004081106.1| ATP-dependent clp protease adaptor protein clps [Micromonospora sp. L5] gi|302568514|gb|ADL44716.1| ATP-dependent Clp protease adaptor protein ClpS [Micromonospora aurantiaca ATCC 27029] gi|315408838|gb|ADU06955.1| ATP-dependent Clp protease adaptor protein ClpS [Micromonospora sp. L5] Length = 99 Score = 57.9 bits (139), Expect = 5e-07, Method: Composition-based stats. Identities = 21/89 (23%), Positives = 32/89 (35%) Query: 36 GIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIML 95 G+A + + ++ +D M +V V Q F E A+ +ML Sbjct: 3 GMAAPQVAPVETPDTEEVPVSDRPWVTIVWDDPVNLMTYVTWVFQKLFGYSREKAERLML 62 Query: 96 KVHHQGIGECGVYAYEIAEMKVNQVMNYS 124 VHH+G A E E Q+ Y Sbjct: 63 DVHHKGKAVVSSGARERMEHDAAQLHAYG 91 >gi|302545011|ref|ZP_07297353.1| ATP-dependent Clp protease adaptor protein ClpS [Streptomyces hygroscopicus ATCC 53653] gi|302462629|gb|EFL25722.1| ATP-dependent Clp protease adaptor protein ClpS [Streptomyces himastatinicus ATCC 53653] Length = 100 Score = 57.5 bits (138), Expect = 5e-07, Method: Composition-based stats. Identities = 26/87 (29%), Positives = 40/87 (45%), Gaps = 7/87 (8%) Query: 53 KVRVPKLYRV-LLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYE 111 +V P + V ++ ND M +V +V Q++F + A +ML VHH+G + E Sbjct: 19 EVPEPDVPWVTVVHNDPVNLMSYVTYVFQSYFGYSKDKAHKLMLDVHHKGRAIVSSGSRE 78 Query: 112 IAEMKVNQVMNYSRQHQYPLQCIMEQK 138 E V Q M H Y L + Q+ Sbjct: 79 EMERDV-QAM-----HGYGLWATLTQE 99 >gi|320010544|gb|ADW05394.1| ATP-dependent Clp protease adaptor protein ClpS [Streptomyces flavogriseus ATCC 33331] Length = 105 Score = 57.5 bits (138), Expect = 5e-07, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 27/62 (43%) Query: 63 LLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMN 122 L+ ND M +V +V Q +F + A +ML VH +G + E E V + Sbjct: 34 LVHNDPVNLMSYVTYVFQAYFGYSKDKAHKLMLDVHQKGRAVVSSGSREEMERDVQAMHG 93 Query: 123 YS 124 Y Sbjct: 94 YG 95 >gi|158317405|ref|YP_001509913.1| ATP-dependent Clp protease adaptor protein ClpS [Frankia sp. EAN1pec] gi|158112810|gb|ABW15007.1| ATP-dependent Clp protease adaptor protein ClpS [Frankia sp. EAN1pec] Length = 122 Score = 57.5 bits (138), Expect = 6e-07, Method: Composition-based stats. Identities = 17/77 (22%), Positives = 28/77 (36%) Query: 48 VRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGV 107 +L+ ++ ND M +V +V + F A +ML VHH+G Sbjct: 38 EDVEDSPEDDRLWVTIVWNDPINLMSYVTYVFRKLFGYSERKATKLMLDVHHKGRATVAS 97 Query: 108 YAYEIAEMKVNQVMNYS 124 E E ++ Y Sbjct: 98 GTREEMEAAAERLHTYG 114 >gi|319948542|ref|ZP_08022673.1| ATP-dependent Clp protease adaptor protein ClpS [Dietzia cinnamea P4] gi|319437789|gb|EFV92778.1| ATP-dependent Clp protease adaptor protein ClpS [Dietzia cinnamea P4] Length = 97 Score = 57.5 bits (138), Expect = 6e-07, Method: Composition-based stats. Identities = 18/76 (23%), Positives = 32/76 (42%), Gaps = 6/76 (7%) Query: 63 LLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMN 122 ++ +D M +V V Q F E A +MLKVH+ G + + KV + Sbjct: 27 VVWDDPVNLMSYVTFVFQRVFGYSREKAHELMLKVHNDGRAVVSSGSRD----KVENDVR 82 Query: 123 YSRQHQYPLQCIMEQK 138 ++ L M+++ Sbjct: 83 KLQEAG--LWATMQRE 96 >gi|284989906|ref|YP_003408460.1| ATP-dependent Clp protease adaptor protein ClpS [Geodermatophilus obscurus DSM 43160] gi|284063151|gb|ADB74089.1| ATP-dependent Clp protease adaptor protein ClpS [Geodermatophilus obscurus DSM 43160] Length = 98 Score = 57.5 bits (138), Expect = 7e-07, Method: Composition-based stats. Identities = 20/76 (26%), Positives = 30/76 (39%), Gaps = 2/76 (2%) Query: 36 GIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIML 95 G + V + P + ++ ND M +V +VLQ F D TA +ML Sbjct: 3 GPLAPTRTPEETVEEHGDLDRP--WVTIVWNDPVNLMTYVTYVLQELFGYDEPTATTLML 60 Query: 96 KVHHQGIGECGVYAYE 111 +VH +G E Sbjct: 61 QVHEEGKAIVSSGPRE 76 >gi|220909224|ref|YP_002484535.1| ATP-dependent Clp protease adaptor protein ClpS [Cyanothece sp. PCC 7425] gi|219865835|gb|ACL46174.1| ATP-dependent Clp protease adaptor protein ClpS [Cyanothece sp. PCC 7425] Length = 112 Score = 57.1 bits (137), Expect = 7e-07, Method: Composition-based stats. Identities = 17/71 (23%), Positives = 31/71 (43%), Gaps = 2/71 (2%) Query: 46 SEVRFSSKVRVP-KLYRVLLVNDNYTPMEFVIHVLQNFF-YKDHETAKCIMLKVHHQGIG 103 + V+ +R P Y+V+++ND++ E V L + + A + +V +G Sbjct: 23 TPVQDRQTIRQPYPHYKVIVLNDDFNTFEHVAKCLMKYIPNMTSDRAWELTYQVDREGQA 82 Query: 104 ECGVYAYEIAE 114 V E AE Sbjct: 83 IVWVGPQEQAE 93 >gi|295396718|ref|ZP_06806864.1| ATP-dependent Clp protease adaptor protein ClpS [Brevibacterium mcbrellneri ATCC 49030] gi|294970464|gb|EFG46393.1| ATP-dependent Clp protease adaptor protein ClpS [Brevibacterium mcbrellneri ATCC 49030] Length = 97 Score = 57.1 bits (137), Expect = 7e-07, Method: Composition-based stats. Identities = 18/96 (18%), Positives = 36/96 (37%), Gaps = 8/96 (8%) Query: 42 NCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQG 101 + EV P + ++ ND M +V +V +++F A +M++VH+ G Sbjct: 7 TLAEPEVDEVVATDSP--WVTIVFNDPVNLMSYVTYVFRSYFGYSPAKANKLMMEVHNNG 64 Query: 102 IGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 E E + + H + L ++ Sbjct: 65 KSVVATGTREEME------RDTAAMHGFGLWATCKK 94 >gi|327332411|gb|EGE74147.1| ATP-dependent Clp protease adaptor protein ClpS [Propionibacterium acnes HL097PA1] Length = 95 Score = 57.1 bits (137), Expect = 8e-07, Method: Composition-based stats. Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 6/75 (8%) Query: 63 LLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMN 122 ++ +D M++V V +F E A +M++VH+QG + E EM+V V Sbjct: 23 VVWDDPVNLMDYVTMVFMRYFGYPRERATQLMIQVHNQGRATVAEGSKE--EMEVA-VHA 79 Query: 123 YSRQHQYPLQCIMEQ 137 H Y LQ +E+ Sbjct: 80 M---HGYGLQASVEK 91 >gi|308177064|ref|YP_003916470.1| ATP-dependent Clp protease adaptor protein ClpS [Arthrobacter arilaitensis Re117] gi|307744527|emb|CBT75499.1| ATP-dependent Clp protease adaptor protein ClpS [Arthrobacter arilaitensis Re117] Length = 94 Score = 57.1 bits (137), Expect = 8e-07, Method: Composition-based stats. Identities = 26/91 (28%), Positives = 41/91 (45%), Gaps = 6/91 (6%) Query: 45 DSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGE 104 D F + K +R+++ ND M +V +V +++F E A+ +ML+VHH G Sbjct: 6 DVISEFETLESQDKPWRLIVWNDPVNLMSYVAYVFRSYFGVSPEKAEKLMLQVHHDGFCT 65 Query: 105 CGVYAYEIAEMKVNQVMNYSRQHQYPLQCIM 135 + E E V Q M H + L M Sbjct: 66 VRSGSREAIESDV-QAM-----HGFGLNATM 90 >gi|282901708|ref|ZP_06309624.1| ATP-dependent Clp protease adaptor protein ClpS [Cylindrospermopsis raciborskii CS-505] gi|281193471|gb|EFA68452.1| ATP-dependent Clp protease adaptor protein ClpS [Cylindrospermopsis raciborskii CS-505] Length = 107 Score = 57.1 bits (137), Expect = 8e-07, Method: Composition-based stats. Identities = 16/61 (26%), Positives = 28/61 (45%), Gaps = 1/61 (1%) Query: 55 RVPKLYRVLLVNDNYTPMEFVIHVLQNFF-YKDHETAKCIMLKVHHQGIGECGVYAYEIA 113 + Y+V+++ND++ E V L + E A + +VH++G V E A Sbjct: 28 KPYPNYKVIVLNDDFNTFEHVAKSLMKYIPGMTTEQAWELTNQVHYEGQAIVWVGPQEQA 87 Query: 114 E 114 E Sbjct: 88 E 88 >gi|254389805|ref|ZP_05005029.1| ATP-dependent Clp protease adapter protein clpS [Streptomyces clavuligerus ATCC 27064] gi|197703516|gb|EDY49328.1| ATP-dependent Clp protease adapter protein clpS [Streptomyces clavuligerus ATCC 27064] Length = 104 Score = 57.1 bits (137), Expect = 9e-07, Method: Composition-based stats. Identities = 23/94 (24%), Positives = 41/94 (43%), Gaps = 1/94 (1%) Query: 32 MNKKGIAEFDNCLDSEVRFSSKVRVPKLYRV-LLVNDNYTPMEFVIHVLQNFFYKDHETA 90 M++ +A + + + V P + V L+ ND M +V +V Q +F + A Sbjct: 1 MDQVSVAPTEIERPAPAEETFAVPEPDVPWVTLVHNDPVNLMSYVTYVFQAYFGYSKDKA 60 Query: 91 KCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYS 124 + +ML VH++G + E E V + Y Sbjct: 61 RKLMLDVHNKGRAVVSSGSREEMERDVQAMHGYG 94 >gi|220909605|ref|YP_002484916.1| ATP-dependent Clp protease adaptor protein ClpS [Cyanothece sp. PCC 7425] gi|219866216|gb|ACL46555.1| ATP-dependent Clp protease adaptor protein ClpS [Cyanothece sp. PCC 7425] Length = 234 Score = 57.1 bits (137), Expect = 9e-07, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 28/65 (43%) Query: 71 PMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYP 130 +EF++ VL F E A + H QG G AE K+N ++ +R+ P Sbjct: 153 SIEFLVTVLSQVFELPREVAFNTATETHRQGQGYVLTLRKAEAEEKINLALDMARKQGSP 212 Query: 131 LQCIM 135 L+ Sbjct: 213 LRLTT 217 >gi|229494029|ref|ZP_04387798.1| ATP-dependent Clp protease adaptor protein ClpS [Rhodococcus erythropolis SK121] gi|229319098|gb|EEN84950.1| ATP-dependent Clp protease adaptor protein ClpS [Rhodococcus erythropolis SK121] Length = 162 Score = 56.7 bits (136), Expect = 9e-07, Method: Composition-based stats. Identities = 18/105 (17%), Positives = 39/105 (37%) Query: 20 ALMSFIFMADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVL 79 A +S + A+ M + + S+ + + ++ +D M +V +V Sbjct: 48 ATVSGTYSANVTMRGATASSPQATPEQSEAVSTIEAADRPWVTIVWDDPVNLMHYVTYVF 107 Query: 80 QNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYS 124 Q F A +M++VH +G + + E V ++ Sbjct: 108 QKLFGYSKAKATDLMMQVHSEGKAVVSSGSRDKMEADVRRLHAAG 152 >gi|306819047|ref|ZP_07452764.1| ATP-dependent Clp protease adaptor protein ClpS [Mobiluncus mulieris ATCC 35239] gi|304648240|gb|EFM45548.1| ATP-dependent Clp protease adaptor protein ClpS [Mobiluncus mulieris ATCC 35239] Length = 99 Score = 56.7 bits (136), Expect = 9e-07, Method: Composition-based stats. Identities = 19/82 (23%), Positives = 35/82 (42%), Gaps = 6/82 (7%) Query: 57 PKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMK 116 P + ++ ND M +V V + +F H+ A+ +M +VH+QG + E Sbjct: 22 PGQWNTVVWNDAVNLMSYVTWVFKTYFGYSHDRAQTLMKEVHYQGRAVVSAGSRE----- 76 Query: 117 VNQVMNYSRQHQYPLQCIMEQK 138 + + Y L +EQ+ Sbjct: 77 QMEADVLA-MSGYGLWATLEQE 97 >gi|227875774|ref|ZP_03993902.1| ATP-dependent Clp protease adaptor protein ClpS [Mobiluncus mulieris ATCC 35243] gi|269977419|ref|ZP_06184391.1| ATP-dependent Clp protease adaptor protein ClpS [Mobiluncus mulieris 28-1] gi|307700310|ref|ZP_07637350.1| ATP-dependent Clp protease adaptor protein ClpS [Mobiluncus mulieris FB024-16] gi|227843716|gb|EEJ53897.1| ATP-dependent Clp protease adaptor protein ClpS [Mobiluncus mulieris ATCC 35243] gi|269934335|gb|EEZ90897.1| ATP-dependent Clp protease adaptor protein ClpS [Mobiluncus mulieris 28-1] gi|307614521|gb|EFN93750.1| ATP-dependent Clp protease adaptor protein ClpS [Mobiluncus mulieris FB024-16] Length = 99 Score = 56.7 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 19/82 (23%), Positives = 35/82 (42%), Gaps = 6/82 (7%) Query: 57 PKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMK 116 P + ++ ND M +V V + +F H+ A+ +M +VH+QG + E Sbjct: 22 PGQWNTVVWNDAVNLMSYVTWVFKTYFGYSHDRAQTLMKEVHYQGRAVVSAGSRE----- 76 Query: 117 VNQVMNYSRQHQYPLQCIMEQK 138 + + Y L +EQ+ Sbjct: 77 QMEADVLA-MSGYGLWATLEQE 97 >gi|256375147|ref|YP_003098807.1| ATP-dependent Clp protease adaptor protein ClpS [Actinosynnema mirum DSM 43827] gi|255919450|gb|ACU34961.1| ATP-dependent Clp protease adaptor protein ClpS [Actinosynnema mirum DSM 43827] Length = 99 Score = 56.7 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 28/67 (41%) Query: 58 KLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKV 117 + L+ ND M +V +V Q F + A +M+ VHH+G A + E V Sbjct: 24 SPWMTLVWNDPVNLMSYVTYVFQKVFGYSKDHATKLMMDVHHKGRAVVSSGAKDKMEADV 83 Query: 118 NQVMNYS 124 ++ Sbjct: 84 AKLHAAG 90 >gi|72162771|ref|YP_290428.1| ATP-dependent Clp protease adaptor protein ClpS [Thermobifida fusca YX] gi|71916503|gb|AAZ56405.1| conserved hypothetical protein [Thermobifida fusca YX] Length = 96 Score = 56.7 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 30/78 (38%) Query: 47 EVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECG 106 E R +R + ++ ND M +V +V Q F A+ +M VH++G Sbjct: 10 EPRIGEDIRPDLPWVTIVWNDPVNLMSYVTYVFQKVFGYPKAKAQKLMEDVHYKGKAVVS 69 Query: 107 VYAYEIAEMKVNQVMNYS 124 E E V + Y Sbjct: 70 SGTREEMERYVTILHQYG 87 >gi|326441362|ref|ZP_08216096.1| ATP-dependent Clp protease adaptor protein ClpS [Streptomyces clavuligerus ATCC 27064] Length = 82 Score = 56.4 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 29/62 (46%) Query: 63 LLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMN 122 L+ ND M +V +V Q +F + A+ +ML VH++G + E E V + Sbjct: 11 LVHNDPVNLMSYVTYVFQAYFGYSKDKARKLMLDVHNKGRAVVSSGSREEMERDVQAMHG 70 Query: 123 YS 124 Y Sbjct: 71 YG 72 >gi|289424879|ref|ZP_06426658.1| ATP-dependent Clp protease adaptor protein ClpS [Propionibacterium acnes SK187] gi|289154578|gb|EFD03264.1| ATP-dependent Clp protease adaptor protein ClpS [Propionibacterium acnes SK187] gi|313763390|gb|EFS34754.1| ATP-dependent Clp protease adaptor protein ClpS [Propionibacterium acnes HL013PA1] gi|313814686|gb|EFS52400.1| ATP-dependent Clp protease adaptor protein ClpS [Propionibacterium acnes HL059PA1] gi|314914532|gb|EFS78363.1| ATP-dependent Clp protease adaptor protein ClpS [Propionibacterium acnes HL005PA4] gi|314917600|gb|EFS81431.1| ATP-dependent Clp protease adaptor protein ClpS [Propionibacterium acnes HL050PA1] gi|314919644|gb|EFS83475.1| ATP-dependent Clp protease adaptor protein ClpS [Propionibacterium acnes HL050PA3] gi|314930283|gb|EFS94114.1| ATP-dependent Clp protease adaptor protein ClpS [Propionibacterium acnes HL067PA1] gi|314957639|gb|EFT01742.1| ATP-dependent Clp protease adaptor protein ClpS [Propionibacterium acnes HL002PA1] gi|314968978|gb|EFT13076.1| ATP-dependent Clp protease adaptor protein ClpS [Propionibacterium acnes HL037PA1] gi|315098015|gb|EFT69991.1| ATP-dependent Clp protease adaptor protein ClpS [Propionibacterium acnes HL059PA2] gi|315102639|gb|EFT74615.1| ATP-dependent Clp protease adaptor protein ClpS [Propionibacterium acnes HL046PA1] gi|315104470|gb|EFT76446.1| ATP-dependent Clp protease adaptor protein ClpS [Propionibacterium acnes HL050PA2] gi|327451218|gb|EGE97872.1| ATP-dependent Clp protease adaptor protein ClpS [Propionibacterium acnes HL087PA3] gi|327452575|gb|EGE99229.1| ATP-dependent Clp protease adaptor protein ClpS [Propionibacterium acnes HL083PA2] gi|328751971|gb|EGF65587.1| ATP-dependent Clp protease adaptor protein ClpS [Propionibacterium acnes HL025PA2] gi|328754785|gb|EGF68401.1| ATP-dependent Clp protease adaptor protein ClpS [Propionibacterium acnes HL087PA1] Length = 95 Score = 56.4 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 6/75 (8%) Query: 63 LLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMN 122 ++ +D M++V V +F E A +M++VH+QG + E EM+V V Sbjct: 23 VVWDDPVNLMDYVTMVFMRYFGYPRERATQLMIQVHNQGRATVAEGSKE--EMEVA-VHA 79 Query: 123 YSRQHQYPLQCIMEQ 137 H Y LQ +E+ Sbjct: 80 M---HGYGLQASVEK 91 >gi|120405250|ref|YP_955079.1| ATP-dependent Clp protease adaptor protein ClpS [Mycobacterium vanbaalenii PYR-1] gi|119958068|gb|ABM15073.1| ATP-dependent Clp protease adaptor protein ClpS [Mycobacterium vanbaalenii PYR-1] Length = 100 Score = 56.4 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 20/93 (21%), Positives = 37/93 (39%), Gaps = 2/93 (2%) Query: 32 MNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAK 91 M A D +VR + P + ++ +D M +V +V Q F A Sbjct: 1 MVTPAKARPGTREDRDVREDATTDAP--WVTIVWDDPVNLMTYVTYVFQKLFGYSEPHAT 58 Query: 92 CIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYS 124 +M++VH++G + E E+ V ++ Sbjct: 59 KLMMQVHNEGKAVVSAGSRESMEVDVTRLHAAG 91 >gi|118472588|ref|YP_889165.1| ATP-dependent Clp protease adaptor protein ClpS [Mycobacterium smegmatis str. MC2 155] gi|118173875|gb|ABK74771.1| ATP-dependent Clp protease adaptor protein ClpS [Mycobacterium smegmatis str. MC2 155] Length = 100 Score = 56.4 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 19/93 (20%), Positives = 36/93 (38%), Gaps = 2/93 (2%) Query: 32 MNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAK 91 M A + +V P + ++ +D M +V +V Q F A Sbjct: 1 MVTPAKARPGTREEVDVASVESTEAP--WVTIVWDDPVNLMSYVTYVFQKLFGYSEPHAT 58 Query: 92 CIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYS 124 +ML+VH++G + E E+ V+++ Sbjct: 59 KLMLQVHNEGKAVVSAGSRESMEVDVSKLHAAG 91 >gi|148272450|ref|YP_001222011.1| putative ATP-dependent Clp protease adaptor protein [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|147830380|emb|CAN01315.1| putative ATP-dependent Clp protease adaptor protein [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length = 124 Score = 56.0 bits (134), Expect = 1e-06, Method: Composition-based stats. Identities = 18/79 (22%), Positives = 31/79 (39%) Query: 36 GIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIML 95 G S+ + P ++ ++ ND M +V +V +++F E A +ML Sbjct: 26 GDPGSGTRTGSDTSLLERASTPPVWSCVVWNDPVNLMTYVSYVFRSYFGFPRERADELML 85 Query: 96 KVHHQGIGECGVYAYEIAE 114 +VH G E E Sbjct: 86 RVHEDGRAVVATGIREEIE 104 >gi|108800817|ref|YP_641014.1| ATP-dependent Clp protease adaptor protein ClpS [Mycobacterium sp. MCS] gi|119869957|ref|YP_939909.1| ATP-dependent Clp protease adaptor protein ClpS [Mycobacterium sp. KMS] gi|126436415|ref|YP_001072106.1| ATP-dependent Clp protease adaptor protein ClpS [Mycobacterium sp. JLS] gi|108771236|gb|ABG09958.1| ATP-dependent Clp protease adaptor protein ClpS [Mycobacterium sp. MCS] gi|119696046|gb|ABL93119.1| ATP-dependent Clp protease adaptor protein ClpS [Mycobacterium sp. KMS] gi|126236215|gb|ABN99615.1| ATP-dependent Clp protease adaptor protein ClpS [Mycobacterium sp. JLS] Length = 88 Score = 56.0 bits (134), Expect = 1e-06, Method: Composition-based stats. Identities = 16/62 (25%), Positives = 30/62 (48%) Query: 63 LLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMN 122 ++ +D M +V +VLQ F A +ML+VH++G + E E+ V+++ Sbjct: 18 IVWDDPVNLMTYVTYVLQKLFGYSEPHATKLMLQVHNEGKAVVSAGSRESMEVDVSKLHA 77 Query: 123 YS 124 Sbjct: 78 AG 79 >gi|282895992|ref|ZP_06304023.1| ATP-dependent Clp protease adaptor protein ClpS [Raphidiopsis brookii D9] gi|281199102|gb|EFA73972.1| ATP-dependent Clp protease adaptor protein ClpS [Raphidiopsis brookii D9] Length = 107 Score = 56.0 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 2/63 (3%) Query: 54 VRVP-KLYRVLLVNDNYTPMEFVIHVLQNFF-YKDHETAKCIMLKVHHQGIGECGVYAYE 111 +R P Y+++++ND++ E V L + E A + +VH++G V E Sbjct: 26 IRKPYPNYKIIVLNDDFNTFEHVAKSLMKYIPGMTTEQAWELTNQVHYEGQAIVWVGPQE 85 Query: 112 IAE 114 AE Sbjct: 86 QAE 88 >gi|255534976|ref|YP_003095347.1| hypothetical protein FIC_00832 [Flavobacteriaceae bacterium 3519-10] gi|255341172|gb|ACU07285.1| hypothetical protein FIC_00832 [Flavobacteriaceae bacterium 3519-10] Length = 103 Score = 56.0 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 20/80 (25%), Positives = 32/80 (40%), Gaps = 2/80 (2%) Query: 33 NKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKC 92 N + D EV K +Y+++L ND+ +FVI L E A+ Sbjct: 8 NVRDYESPQREYDEEVALLEKEDE--VYKLVLWNDDVNTFDFVIEALVEICGHTLEQAEQ 65 Query: 93 IMLKVHHQGIGECGVYAYEI 112 + VH++G + EI Sbjct: 66 CTILVHYKGKCTVKTGSLEI 85 >gi|213965891|ref|ZP_03394082.1| ATP-dependent Clp protease adaptor protein ClpS [Corynebacterium amycolatum SK46] gi|213951469|gb|EEB62860.1| ATP-dependent Clp protease adaptor protein ClpS [Corynebacterium amycolatum SK46] Length = 97 Score = 56.0 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 18/80 (22%), Positives = 33/80 (41%), Gaps = 6/80 (7%) Query: 58 KLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKV 117 + ++ ++ +D M +V +V Q F D + A +M+ VH +G + E V Sbjct: 22 RPWQCIVWDDQVNSMSYVTYVFQMLFGMDRKKAHALMMTVHTEGKAIVSSGERDKVEADV 81 Query: 118 NQVMNYSRQHQYPLQCIMEQ 137 ++ L MEQ Sbjct: 82 KKLHKAG------LWATMEQ 95 >gi|284029798|ref|YP_003379729.1| ATP-dependent Clp protease adaptor protein ClpS [Kribbella flavida DSM 17836] gi|283809091|gb|ADB30930.1| ATP-dependent Clp protease adaptor protein ClpS [Kribbella flavida DSM 17836] Length = 95 Score = 55.6 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 19/79 (24%), Positives = 36/79 (45%), Gaps = 2/79 (2%) Query: 46 SEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGEC 105 EV + ++ P + ++ ND M++V V Q +F + A+ +M++VH +G Sbjct: 11 PEVDEAIELSPP--WVTIVWNDPVNLMDYVTFVFQTYFGYSKQKAEKLMMQVHEEGKSAV 68 Query: 106 GVYAYEIAEMKVNQVMNYS 124 E E V + +Y Sbjct: 69 SSGNREAMERDVEAMHSYG 87 >gi|326779067|ref|ZP_08238332.1| ATP-dependent Clp protease adaptor protein ClpS [Streptomyces cf. griseus XylebKG-1] gi|326659400|gb|EGE44246.1| ATP-dependent Clp protease adaptor protein ClpS [Streptomyces cf. griseus XylebKG-1] Length = 105 Score = 55.6 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 17/62 (27%), Positives = 27/62 (43%) Query: 63 LLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMN 122 L+ ND M +V +V Q +F + A +M+ VH +G + E E V + Sbjct: 34 LVHNDPVNLMSYVTYVFQAYFGYPKDKAHRLMMDVHQKGRAVVSSGSREEMERDVQAMHG 93 Query: 123 YS 124 Y Sbjct: 94 YG 95 >gi|239941589|ref|ZP_04693526.1| ATP-dependent Clp protease adaptor protein ClpS [Streptomyces roseosporus NRRL 15998] gi|239988054|ref|ZP_04708718.1| ATP-dependent Clp protease adaptor protein ClpS [Streptomyces roseosporus NRRL 11379] gi|291445032|ref|ZP_06584422.1| ATP-dependent Clp protease adaptor protein ClpS [Streptomyces roseosporus NRRL 15998] gi|291347979|gb|EFE74883.1| ATP-dependent Clp protease adaptor protein ClpS [Streptomyces roseosporus NRRL 15998] Length = 105 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 27/62 (43%) Query: 63 LLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMN 122 L+ ND M +V +V Q +F + A +ML VH +G + E E V + Sbjct: 34 LVHNDPVNLMSYVTYVFQAYFGYPKDKAHKLMLDVHQKGRAVVSSGSREEMERDVQAMHG 93 Query: 123 YS 124 Y Sbjct: 94 YG 95 >gi|331695359|ref|YP_004331598.1| ATP-dependent Clp protease adapter protein clpS [Pseudonocardia dioxanivorans CB1190] gi|326950048|gb|AEA23745.1| ATP-dependent Clp protease adapter protein clpS [Pseudonocardia dioxanivorans CB1190] Length = 98 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 29/67 (43%) Query: 58 KLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKV 117 ++ ++ ND M +V +VLQ F A +ML VHH+G + E+ V Sbjct: 24 TPWQAIVWNDPVNLMSYVTYVLQKLFGYPEPKATALMLDVHHKGKAAVSSGDKDKIEIDV 83 Query: 118 NQVMNYS 124 ++ Sbjct: 84 AKLHAAG 90 >gi|170078679|ref|YP_001735317.1| putative ATP-dependent Clp protease adaptor protein [Synechococcus sp. PCC 7002] gi|169886348|gb|ACB00062.1| putative ATP-dependent Clp protease adaptor protein [Synechococcus sp. PCC 7002] Length = 97 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 18/70 (25%), Positives = 30/70 (42%), Gaps = 2/70 (2%) Query: 47 EVRFSSKVRVP-KLYRVLLVNDNYTPMEFVIHVLQNFF-YKDHETAKCIMLKVHHQGIGE 104 + VR P ++V+++ND++ E V H L + + A + +VH G Sbjct: 9 KESDRQTVRKPYPNFKVIVLNDDFNTFEHVAHCLMTYIPNMTADQAWNLTNQVHFDGQAI 68 Query: 105 CGVYAYEIAE 114 V E AE Sbjct: 69 VWVGPQEPAE 78 >gi|313835868|gb|EFS73582.1| ATP-dependent Clp protease adaptor protein ClpS [Propionibacterium acnes HL037PA2] gi|314927132|gb|EFS90963.1| ATP-dependent Clp protease adaptor protein ClpS [Propionibacterium acnes HL044PA1] gi|314970774|gb|EFT14872.1| ATP-dependent Clp protease adaptor protein ClpS [Propionibacterium acnes HL037PA3] gi|328906038|gb|EGG25813.1| ATP-dependent Clp protease adaptor protein ClpS [Propionibacterium sp. P08] Length = 95 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 19/75 (25%), Positives = 33/75 (44%), Gaps = 6/75 (8%) Query: 63 LLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMN 122 ++ +D M++V V +F E A +M++VH++G + E E V Sbjct: 23 VVWDDPVNLMDYVTMVFMRYFGYPRERATQLMIQVHNEGRATVAEGSKEEME---IAVHA 79 Query: 123 YSRQHQYPLQCIMEQ 137 H Y LQ +E+ Sbjct: 80 M---HGYGLQASVEK 91 >gi|182438416|ref|YP_001826135.1| ATP-dependent Clp protease adaptor protein ClpS [Streptomyces griseus subsp. griseus NBRC 13350] gi|178466932|dbj|BAG21452.1| putative ATP-dependent Clp protease adaptor protein ClpS [Streptomyces griseus subsp. griseus NBRC 13350] Length = 105 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 17/62 (27%), Positives = 27/62 (43%) Query: 63 LLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMN 122 L+ ND M +V +V Q +F + A +M+ VH +G + E E V + Sbjct: 34 LVHNDPVNLMSYVTYVFQAYFGYPKDKAHRLMMDVHQKGRAVVSSGSREEMERDVQAMHG 93 Query: 123 YS 124 Y Sbjct: 94 YG 95 >gi|289427807|ref|ZP_06429516.1| ATP-dependent Clp protease adaptor protein ClpS [Propionibacterium acnes J165] gi|289158989|gb|EFD07184.1| ATP-dependent Clp protease adaptor protein ClpS [Propionibacterium acnes J165] gi|313773267|gb|EFS39233.1| ATP-dependent Clp protease adaptor protein ClpS [Propionibacterium acnes HL074PA1] gi|313793450|gb|EFS41501.1| ATP-dependent Clp protease adaptor protein ClpS [Propionibacterium acnes HL110PA1] gi|313801151|gb|EFS42414.1| ATP-dependent Clp protease adaptor protein ClpS [Propionibacterium acnes HL110PA2] gi|313808500|gb|EFS46965.1| ATP-dependent Clp protease adaptor protein ClpS [Propionibacterium acnes HL087PA2] gi|313812073|gb|EFS49787.1| ATP-dependent Clp protease adaptor protein ClpS [Propionibacterium acnes HL083PA1] gi|313819235|gb|EFS56949.1| ATP-dependent Clp protease adaptor protein ClpS [Propionibacterium acnes HL046PA2] gi|313821093|gb|EFS58807.1| ATP-dependent Clp protease adaptor protein ClpS [Propionibacterium acnes HL036PA1] gi|313823481|gb|EFS61195.1| ATP-dependent Clp protease adaptor protein ClpS [Propionibacterium acnes HL036PA2] gi|313827016|gb|EFS64730.1| ATP-dependent Clp protease adaptor protein ClpS [Propionibacterium acnes HL063PA1] gi|313829870|gb|EFS67584.1| ATP-dependent Clp protease adaptor protein ClpS [Propionibacterium acnes HL007PA1] gi|313834712|gb|EFS72426.1| ATP-dependent Clp protease adaptor protein ClpS [Propionibacterium acnes HL056PA1] gi|313837919|gb|EFS75633.1| ATP-dependent Clp protease adaptor protein ClpS [Propionibacterium acnes HL086PA1] gi|314925922|gb|EFS89753.1| ATP-dependent Clp protease adaptor protein ClpS [Propionibacterium acnes HL036PA3] gi|314960897|gb|EFT04998.1| ATP-dependent Clp protease adaptor protein ClpS [Propionibacterium acnes HL002PA2] gi|314963339|gb|EFT07439.1| ATP-dependent Clp protease adaptor protein ClpS [Propionibacterium acnes HL082PA1] gi|314974016|gb|EFT18112.1| ATP-dependent Clp protease adaptor protein ClpS [Propionibacterium acnes HL053PA1] gi|314975442|gb|EFT19537.1| ATP-dependent Clp protease adaptor protein ClpS [Propionibacterium acnes HL045PA1] gi|314979459|gb|EFT23553.1| ATP-dependent Clp protease adaptor protein ClpS [Propionibacterium acnes HL072PA2] gi|314984202|gb|EFT28294.1| ATP-dependent Clp protease adaptor protein ClpS [Propionibacterium acnes HL005PA1] gi|314988443|gb|EFT32534.1| ATP-dependent Clp protease adaptor protein ClpS [Propionibacterium acnes HL005PA2] gi|314988638|gb|EFT32729.1| ATP-dependent Clp protease adaptor protein ClpS [Propionibacterium acnes HL005PA3] gi|315079381|gb|EFT51379.1| ATP-dependent Clp protease adaptor protein ClpS [Propionibacterium acnes HL053PA2] gi|315083407|gb|EFT55383.1| ATP-dependent Clp protease adaptor protein ClpS [Propionibacterium acnes HL027PA2] gi|315086798|gb|EFT58774.1| ATP-dependent Clp protease adaptor protein ClpS [Propionibacterium acnes HL002PA3] gi|315089445|gb|EFT61421.1| ATP-dependent Clp protease adaptor protein ClpS [Propionibacterium acnes HL072PA1] gi|315097784|gb|EFT69760.1| ATP-dependent Clp protease adaptor protein ClpS [Propionibacterium acnes HL038PA1] gi|327325391|gb|EGE67196.1| ATP-dependent Clp protease adaptor protein ClpS [Propionibacterium acnes HL096PA2] gi|327328270|gb|EGE70034.1| ATP-dependent Clp protease adaptor protein ClpS [Propionibacterium acnes HL096PA3] gi|327443684|gb|EGE90338.1| ATP-dependent Clp protease adaptor protein ClpS [Propionibacterium acnes HL043PA1] gi|327449221|gb|EGE95875.1| ATP-dependent Clp protease adaptor protein ClpS [Propionibacterium acnes HL043PA2] gi|327450185|gb|EGE96839.1| ATP-dependent Clp protease adaptor protein ClpS [Propionibacterium acnes HL013PA2] gi|327451249|gb|EGE97903.1| ATP-dependent Clp protease adaptor protein ClpS [Propionibacterium acnes HL092PA1] gi|328756759|gb|EGF70375.1| ATP-dependent Clp protease adaptor protein ClpS [Propionibacterium acnes HL020PA1] gi|328761033|gb|EGF74585.1| ATP-dependent Clp protease adaptor protein ClpS [Propionibacterium acnes HL099PA1] Length = 95 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 6/75 (8%) Query: 63 LLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMN 122 ++ +D M++V V +F E A +M++VH++G E EM+V V Sbjct: 23 VVWDDPVNLMDYVTMVFMRYFGYPRERATQLMIQVHYRGRATVAEGNKE--EMEVA-VHA 79 Query: 123 YSRQHQYPLQCIMEQ 137 H Y LQ +E+ Sbjct: 80 M---HGYGLQASVEK 91 >gi|298345219|ref|YP_003717906.1| ATP-dependent Clp protease adaptor protein ClpS [Mobiluncus curtisii ATCC 43063] gi|304390779|ref|ZP_07372731.1| ATP-dependent Clp protease adaptor protein ClpS [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|315655641|ref|ZP_07908539.1| ATP-dependent Clp protease adaptor protein ClpS [Mobiluncus curtisii ATCC 51333] gi|315656444|ref|ZP_07909333.1| ATP-dependent Clp protease adaptor protein ClpS [Mobiluncus curtisii subsp. holmesii ATCC 35242] gi|298235280|gb|ADI66412.1| ATP-dependent Clp protease adaptor protein ClpS [Mobiluncus curtisii ATCC 43063] gi|304325662|gb|EFL92908.1| ATP-dependent Clp protease adaptor protein ClpS [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|315489705|gb|EFU79332.1| ATP-dependent Clp protease adaptor protein ClpS [Mobiluncus curtisii ATCC 51333] gi|315493003|gb|EFU82605.1| ATP-dependent Clp protease adaptor protein ClpS [Mobiluncus curtisii subsp. holmesii ATCC 35242] Length = 100 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 19/82 (23%), Positives = 34/82 (41%), Gaps = 6/82 (7%) Query: 57 PKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMK 116 P + ++ ND M +V V + +F HE A+ +M +VH +G E Sbjct: 23 PGQWNTVVWNDAVNLMSYVTWVFKTYFGYSHERAEHLMKEVHFKGRAVVSAGTRE----- 77 Query: 117 VNQVMNYSRQHQYPLQCIMEQK 138 + + +Y L +EQ+ Sbjct: 78 QMEADVLA-MSEYGLWATLEQE 98 >gi|313812343|gb|EFS50057.1| ATP-dependent Clp protease adaptor protein ClpS [Propionibacterium acnes HL025PA1] Length = 95 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 6/75 (8%) Query: 63 LLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMN 122 ++ +D M++V V +F E A +M++VH++G E EM+V V Sbjct: 23 VVWDDPVNLMDYVTMVFMRYFGYPRERATQLMIQVHNRGRATVAEGNKE--EMEVA-VHA 79 Query: 123 YSRQHQYPLQCIMEQ 137 H Y LQ +E+ Sbjct: 80 M---HGYGLQASVEK 91 >gi|182414611|ref|YP_001819677.1| ATP-dependent Clp protease adaptor protein ClpS [Opitutus terrae PB90-1] gi|177841825|gb|ACB76077.1| ATP-dependent Clp protease adaptor protein ClpS [Opitutus terrae PB90-1] Length = 107 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 22/76 (28%), Positives = 38/76 (50%) Query: 39 EFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVH 98 E + E + ++ + + ++RV+++ND M +V+ V + F D TA+ ML+VH Sbjct: 11 ESNPHSSPESQGATALALEGIWRVVVLNDPVNLMSYVVMVFKKVFGFDDATARRHMLEVH 70 Query: 99 HQGIGECGVYAYEIAE 114 QG E AE Sbjct: 71 EQGRSIVWSGLREKAE 86 >gi|209526864|ref|ZP_03275384.1| ATP-dependent Clp protease adaptor protein ClpS [Arthrospira maxima CS-328] gi|209492735|gb|EDZ93070.1| ATP-dependent Clp protease adaptor protein ClpS [Arthrospira maxima CS-328] Length = 97 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 2/68 (2%) Query: 49 RFSSKVRVP-KLYRVLLVNDNYTPMEFVIHVLQNFF-YKDHETAKCIMLKVHHQGIGECG 106 R S VR P Y+V+++ND++ + V + L + + A + +VH++G Sbjct: 11 RSSQTVRKPYPNYKVIVLNDDFNTFQHVANCLMKYLPGMTSDQAWELTNRVHYEGQATVW 70 Query: 107 VYAYEIAE 114 V E AE Sbjct: 71 VGPLEQAE 78 >gi|37521807|ref|NP_925184.1| ATP-dependent Clp protease adaptor [Gloeobacter violaceus PCC 7421] gi|35212805|dbj|BAC90179.1| gsl2238 [Gloeobacter violaceus PCC 7421] Length = 95 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 15/70 (21%), Positives = 34/70 (48%), Gaps = 1/70 (1%) Query: 46 SEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFF-YKDHETAKCIMLKVHHQGIGE 104 + + + V+ K ++V+++ND++ + V + L + + + A + +VH +G Sbjct: 7 TPTKPETSVKALKPWKVIVLNDDFNTFQHVANCLVKYIPHMHPDRAWKLTQQVHSEGRAI 66 Query: 105 CGVYAYEIAE 114 V E AE Sbjct: 67 VWVGPLEQAE 76 >gi|291567197|dbj|BAI89469.1| ATP-dependent Clp protease adaptor protein ClpS [Arthrospira platensis NIES-39] Length = 97 Score = 54.8 bits (131), Expect = 3e-06, Method: Composition-based stats. Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 2/68 (2%) Query: 49 RFSSKVRVP-KLYRVLLVNDNYTPMEFVIHVLQNFF-YKDHETAKCIMLKVHHQGIGECG 106 R S VR P Y+V+++ND++ + V + L + + A + +VH++G Sbjct: 11 RSSQTVRKPYPNYKVIVLNDDFNTFQHVANCLMKYLPGMTSDQAWELTNRVHYEGQATVW 70 Query: 107 VYAYEIAE 114 V E AE Sbjct: 71 VGPLEQAE 78 >gi|289644636|ref|ZP_06476702.1| ATP-dependent Clp protease adaptor protein ClpS [Frankia symbiont of Datisca glomerata] gi|289505564|gb|EFD26597.1| ATP-dependent Clp protease adaptor protein ClpS [Frankia symbiont of Datisca glomerata] Length = 99 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 18/82 (21%), Positives = 30/82 (36%) Query: 43 CLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGI 102 + + + + ++ ND M +V +V Q F E AK +ML VH +G Sbjct: 10 APEEVLESDEVAERDRPWVTIVWNDPVNLMSYVTYVFQKLFGFSREKAKALMLDVHRKGR 69 Query: 103 GECGVYAYEIAEMKVNQVMNYS 124 E E ++ Y Sbjct: 70 ATVSSGTREEMERDATRLHAYG 91 >gi|315080041|gb|EFT52017.1| ATP-dependent Clp protease adaptor protein ClpS [Propionibacterium acnes HL078PA1] Length = 93 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 6/75 (8%) Query: 63 LLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMN 122 ++ +D M++V V +F E A +M++VH++G E EM+V V Sbjct: 23 VVWDDPVNLMDYVTMVFMRYFGYPRERATQLMIQVHYRGRATVAEGNKE--EMEVA-VHA 79 Query: 123 YSRQHQYPLQCIMEQ 137 H Y LQ +E+ Sbjct: 80 M---HGYGLQASVEK 91 >gi|325955115|ref|YP_004238775.1| ATP-dependent Clp protease adaptor protein ClpS [Weeksella virosa DSM 16922] gi|323437733|gb|ADX68197.1| ATP-dependent Clp protease adaptor protein ClpS [Weeksella virosa DSM 16922] Length = 97 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 14/70 (20%), Positives = 27/70 (38%), Gaps = 2/70 (2%) Query: 43 CLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGI 102 E + ++++ ND+ ++VI L + E A+ L +H+ G Sbjct: 10 ETSPETDIEVLTEEKEQNQIIVHNDDVNTFDWVIESLIDVCDHTPEQAEQCTLIIHYNGK 69 Query: 103 GEC--GVYAY 110 + G Y Y Sbjct: 70 CDVLTGEYTY 79 >gi|326773727|ref|ZP_08233010.1| ATP-dependent Clp protease adaptor protein ClpS [Actinomyces viscosus C505] gi|326636957|gb|EGE37860.1| ATP-dependent Clp protease adaptor protein ClpS [Actinomyces viscosus C505] Length = 105 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 23/94 (24%), Positives = 39/94 (41%), Gaps = 6/94 (6%) Query: 44 LDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIG 103 + E+ S+VR +L+ ++ +D M +V V ++F A+ M++VH G Sbjct: 4 AEPEILEESRVRAQRLWCTVVHDDPVNTMSYVTWVFHSYFGFSLPVAEARMMQVHTTGRA 63 Query: 104 ECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 A E E V H Y L+ +E Sbjct: 64 VVSQGARERME---VDVTAM---HGYGLRATIEP 91 >gi|315022224|gb|EFT35252.1| hypothetical protein RAYM_05465 [Riemerella anatipestifer RA-YM] gi|325336648|gb|ADZ12922.1| ClpS [Riemerella anatipestifer RA-GD] Length = 97 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 17/75 (22%), Positives = 34/75 (45%), Gaps = 4/75 (5%) Query: 31 RMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETA 90 +M + I +N + V S++ + ++++L ND++ +FVI L E A Sbjct: 2 KMVFQNIPNKENEEEVSVLSSTEAK----HKLVLHNDDFNTFDFVIESLMEVCAHTLEQA 57 Query: 91 KCIMLKVHHQGIGEC 105 + VH++G Sbjct: 58 EQCTFLVHYKGKCTV 72 >gi|184200644|ref|YP_001854851.1| ATP-dependent Clp protease adaptor protein ClpS [Kocuria rhizophila DC2201] gi|183580874|dbj|BAG29345.1| putative ATP-dependent Clp protease adaptor protein ClpS [Kocuria rhizophila DC2201] Length = 116 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 25/120 (20%), Positives = 47/120 (39%), Gaps = 15/120 (12%) Query: 18 ILALMSFIFMADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIH 77 L + ++ + +A D + + VP + V++ +D M +V++ Sbjct: 8 APVLAPGVLVSAAPAESPTVAREDQAA-------TAMNVP--WNVVVWDDPVNLMSYVVY 58 Query: 78 VLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 V + F A+ +ML+VHH G + E AE V+ + Y L E+ Sbjct: 59 VFRAHFGYSDAKARTLMLEVHHSGRSIVFTGSLEEAEAHVSSLH------GYGLWATYEK 112 >gi|22298631|ref|NP_681878.1| ATP-dependent Clp protease adaptor [Thermosynechococcus elongatus BP-1] gi|37077203|sp|Q8DJY3|CLPS_THEEB RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|22294811|dbj|BAC08640.1| tsr1087 [Thermosynechococcus elongatus BP-1] Length = 94 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 15/70 (21%), Positives = 30/70 (42%), Gaps = 1/70 (1%) Query: 46 SEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFF-YKDHETAKCIMLKVHHQGIGE 104 + R + Y+V+++ND++ + V L + + A + +VH++G Sbjct: 6 PQERQQVTRKHYPNYKVIVLNDDFNTFQHVAACLMKYIPNMTSDRAWELTNQVHYEGQAI 65 Query: 105 CGVYAYEIAE 114 V E AE Sbjct: 66 VWVGPQEQAE 75 >gi|254774371|ref|ZP_05215887.1| ATP-dependent Clp protease adaptor protein ClpS [Mycobacterium avium subsp. avium ATCC 25291] Length = 102 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 19/97 (19%), Positives = 36/97 (37%), Gaps = 7/97 (7%) Query: 28 ADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDH 87 ++ G EV S + ++ +D M +V +V Q F Sbjct: 4 PTEPKSRPGTTGQRESAPEEVTASP-------WVTIVWDDPVNLMTYVTYVFQKLFGYSE 56 Query: 88 ETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYS 124 A +ML+VH++G + E E+ V+++ Sbjct: 57 PHATKLMLQVHNEGKAVVSAGSREAMEVDVSKLHAAG 93 >gi|313205912|ref|YP_004045089.1| ATP-dependent clp protease adaptor protein clps [Riemerella anatipestifer DSM 15868] gi|312445228|gb|ADQ81583.1| ATP-dependent Clp protease adaptor protein ClpS [Riemerella anatipestifer DSM 15868] Length = 95 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 17/74 (22%), Positives = 33/74 (44%), Gaps = 4/74 (5%) Query: 32 MNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAK 91 M + I +N + V S++ + ++++L ND++ +FVI L E A+ Sbjct: 1 MVFQNIPNKENEEEVSVLSSTEAK----HKLVLHNDDFNTFDFVIESLMEVCAHTLEQAE 56 Query: 92 CIMLKVHHQGIGEC 105 VH++G Sbjct: 57 QCTFLVHYKGKCTV 70 >gi|320534619|ref|ZP_08035064.1| ATP-dependent Clp protease adaptor protein ClpS [Actinomyces sp. oral taxon 171 str. F0337] gi|320133139|gb|EFW25642.1| ATP-dependent Clp protease adaptor protein ClpS [Actinomyces sp. oral taxon 171 str. F0337] Length = 111 Score = 54.0 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 22/94 (23%), Positives = 39/94 (41%), Gaps = 6/94 (6%) Query: 44 LDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIG 103 + E S+VR +L+ ++ +D M +V V ++F A+ M++VH G Sbjct: 8 VKPETLEESRVRAQRLWCTVVHDDPINTMSYVTWVFHSYFGFSLPVAEARMMQVHTAGRA 67 Query: 104 ECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 A E E+ V + Y L+ +E Sbjct: 68 VVSRGARERMEVDVTAMH------GYGLRATIEP 95 >gi|326798915|ref|YP_004316734.1| ATP-dependent Clp protease adaptor protein ClpS [Sphingobacterium sp. 21] gi|326549679|gb|ADZ78064.1| ATP-dependent Clp protease adaptor protein ClpS [Sphingobacterium sp. 21] Length = 96 Score = 54.0 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 18/75 (24%), Positives = 31/75 (41%), Gaps = 2/75 (2%) Query: 37 IAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLK 96 +AE ++ + +R++L ND+ + VIH L + A+ I K Sbjct: 3 MAETQVQEETFTLEEILSVTKEYHRLILWNDDINTFDHVIHCLMKYLDYSESQAEKIAWK 62 Query: 97 VHHQGIGEC--GVYA 109 VH++G G Y Sbjct: 63 VHNEGKCAVLEGTYT 77 >gi|84494380|ref|ZP_00993499.1| hypothetical protein JNB_06279 [Janibacter sp. HTCC2649] gi|84383873|gb|EAP99753.1| hypothetical protein JNB_06279 [Janibacter sp. HTCC2649] Length = 96 Score = 54.0 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 29/67 (43%) Query: 45 DSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGE 104 + S+ V + L+ ND M +V +V Q++F D A+ +M+ VH +G Sbjct: 8 EEITSSSTDVAPDLPWITLVWNDPVNLMSYVTYVFQSYFGYDRAKAEKLMMDVHVKGRAV 67 Query: 105 CGVYAYE 111 E Sbjct: 68 VSHGPRE 74 >gi|183984038|ref|YP_001852329.1| hypothetical protein MMAR_4067 [Mycobacterium marinum M] gi|238690951|sp|B2HQI2|CLPS_MYCMM RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|183177364|gb|ACC42474.1| conserved hypothetical protein [Mycobacterium marinum M] Length = 101 Score = 54.0 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 18/90 (20%), Positives = 35/90 (38%), Gaps = 2/90 (2%) Query: 35 KGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIM 94 A+ + E P + ++ +D M +V +V Q F A +M Sbjct: 5 SAPAKPGSVGQQESASRDATASP--WVTIVWDDPVNLMTYVTYVFQKLFGYSEPHATKLM 62 Query: 95 LKVHHQGIGECGVYAYEIAEMKVNQVMNYS 124 L+VH++G + E E+ V+++ Sbjct: 63 LQVHNEGRAVVSAGSREAMEVDVSKLHAAG 92 >gi|15608471|ref|NP_215847.1| ATP-dependent Clp protease adaptor protein ClpS [Mycobacterium tuberculosis H37Rv] gi|15840786|ref|NP_335823.1| ATP-dependent Clp protease adaptor protein ClpS [Mycobacterium tuberculosis CDC1551] gi|31792527|ref|NP_855020.1| ATP-dependent Clp protease adaptor protein ClpS [Mycobacterium bovis AF2122/97] gi|121637262|ref|YP_977485.1| ATP-dependent Clp protease adaptor protein ClpS [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148661120|ref|YP_001282643.1| ATP-dependent Clp protease adaptor protein ClpS [Mycobacterium tuberculosis H37Ra] gi|148822554|ref|YP_001287308.1| ATP-dependent Clp protease adaptor protein ClpS [Mycobacterium tuberculosis F11] gi|167969078|ref|ZP_02551355.1| ATP-dependent Clp protease adaptor protein ClpS [Mycobacterium tuberculosis H37Ra] gi|215403178|ref|ZP_03415359.1| ATP-dependent Clp protease adaptor protein ClpS [Mycobacterium tuberculosis 02_1987] gi|215410976|ref|ZP_03419784.1| ATP-dependent Clp protease adaptor protein ClpS [Mycobacterium tuberculosis 94_M4241A] gi|215426660|ref|ZP_03424579.1| ATP-dependent Clp protease adaptor protein ClpS [Mycobacterium tuberculosis T92] gi|215430217|ref|ZP_03428136.1| ATP-dependent Clp protease adaptor protein ClpS [Mycobacterium tuberculosis EAS054] gi|215445513|ref|ZP_03432265.1| ATP-dependent Clp protease adaptor protein ClpS [Mycobacterium tuberculosis T85] gi|218753042|ref|ZP_03531838.1| ATP-dependent Clp protease adaptor protein ClpS [Mycobacterium tuberculosis GM 1503] gi|224989736|ref|YP_002644423.1| ATP-dependent Clp protease adaptor protein [Mycobacterium bovis BCG str. Tokyo 172] gi|253799621|ref|YP_003032622.1| hypothetical protein TBMG_02647 [Mycobacterium tuberculosis KZN 1435] gi|254231583|ref|ZP_04924910.1| conserved hypothetical protein [Mycobacterium tuberculosis C] gi|254364228|ref|ZP_04980274.1| conserved hypothetical protein [Mycobacterium tuberculosis str. Haarlem] gi|254550343|ref|ZP_05140790.1| ATP-dependent Clp protease adaptor protein ClpS [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|260186272|ref|ZP_05763746.1| ATP-dependent Clp protease adaptor protein ClpS [Mycobacterium tuberculosis CPHL_A] gi|260200388|ref|ZP_05767879.1| ATP-dependent Clp protease adaptor protein ClpS [Mycobacterium tuberculosis T46] gi|260204592|ref|ZP_05772083.1| ATP-dependent Clp protease adaptor protein ClpS [Mycobacterium tuberculosis K85] gi|289442773|ref|ZP_06432517.1| conserved hypothetical protein [Mycobacterium tuberculosis T46] gi|289446929|ref|ZP_06436673.1| ATP-dependent Clp protease adaptor protein clpS [Mycobacterium tuberculosis CPHL_A] gi|289554877|ref|ZP_06444087.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 605] gi|289573997|ref|ZP_06454224.1| ATP-dependent Clp protease adaptor protein ClpS [Mycobacterium tuberculosis K85] gi|289745083|ref|ZP_06504461.1| ATP-dependent Clp protease adaptor protein ClpS [Mycobacterium tuberculosis 02_1987] gi|289749887|ref|ZP_06509265.1| conserved hypothetical protein [Mycobacterium tuberculosis T92] gi|289753413|ref|ZP_06512791.1| ATP-dependent Clp protease adapter protein clpS [Mycobacterium tuberculosis EAS054] gi|289757436|ref|ZP_06516814.1| ATP-dependent Clp protease adapter protein clpS [Mycobacterium tuberculosis T85] gi|289761492|ref|ZP_06520870.1| ATP-dependent Clp protease adaptor protein clpS [Mycobacterium tuberculosis GM 1503] gi|294994889|ref|ZP_06800580.1| ATP-dependent Clp protease adaptor protein ClpS [Mycobacterium tuberculosis 210] gi|297633884|ref|ZP_06951664.1| ATP-dependent Clp protease adaptor protein ClpS [Mycobacterium tuberculosis KZN 4207] gi|297730872|ref|ZP_06959990.1| ATP-dependent Clp protease adaptor protein ClpS [Mycobacterium tuberculosis KZN R506] gi|298524838|ref|ZP_07012247.1| ATP-dependent Clp protease adaptor protein ClpS [Mycobacterium tuberculosis 94_M4241A] gi|306775510|ref|ZP_07413847.1| hypothetical protein TMAG_03478 [Mycobacterium tuberculosis SUMu001] gi|306780660|ref|ZP_07418997.1| hypothetical protein TMBG_01162 [Mycobacterium tuberculosis SUMu002] gi|306784061|ref|ZP_07422383.1| hypothetical protein TMCG_00966 [Mycobacterium tuberculosis SUMu003] gi|306788422|ref|ZP_07426744.1| hypothetical protein TMDG_01214 [Mycobacterium tuberculosis SUMu004] gi|306792751|ref|ZP_07431053.1| hypothetical protein TMEG_01233 [Mycobacterium tuberculosis SUMu005] gi|306797155|ref|ZP_07435457.1| hypothetical protein TMFG_02526 [Mycobacterium tuberculosis SUMu006] gi|306803034|ref|ZP_07439702.1| hypothetical protein TMHG_00518 [Mycobacterium tuberculosis SUMu008] gi|306807228|ref|ZP_07443896.1| hypothetical protein TMGG_01898 [Mycobacterium tuberculosis SUMu007] gi|306967425|ref|ZP_07480086.1| hypothetical protein TMIG_03011 [Mycobacterium tuberculosis SUMu009] gi|306971618|ref|ZP_07484279.1| hypothetical protein TMJG_03719 [Mycobacterium tuberculosis SUMu010] gi|307079330|ref|ZP_07488500.1| hypothetical protein TMKG_01834 [Mycobacterium tuberculosis SUMu011] gi|307083895|ref|ZP_07493008.1| hypothetical protein TMLG_03423 [Mycobacterium tuberculosis SUMu012] gi|313658205|ref|ZP_07815085.1| ATP-dependent Clp protease adaptor protein ClpS [Mycobacterium tuberculosis KZN V2475] gi|54036860|sp|P67648|CLPS_MYCBO RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|54041057|sp|P67647|CLPS_MYCTU RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|158512947|sp|A1KIC1|CLPS_MYCBP RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|158513366|sp|A5U231|CLPS_MYCTA RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|254763820|sp|C1AMX6|CLPS_MYCBT RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|1340097|emb|CAA98095.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium tuberculosis H37Rv] gi|13880981|gb|AAK45637.1| conserved hypothetical protein [Mycobacterium tuberculosis CDC1551] gi|31618116|emb|CAD94227.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium bovis AF2122/97] gi|121492909|emb|CAL71380.1| Conserved hypothetical protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|124600642|gb|EAY59652.1| conserved hypothetical protein [Mycobacterium tuberculosis C] gi|134149742|gb|EBA41787.1| conserved hypothetical protein [Mycobacterium tuberculosis str. Haarlem] gi|148505272|gb|ABQ73081.1| ATP-dependent Clp protease adaptor protein [Mycobacterium tuberculosis H37Ra] gi|148721081|gb|ABR05706.1| conserved hypothetical protein [Mycobacterium tuberculosis F11] gi|224772849|dbj|BAH25655.1| ATP-dependent Clp protease adaptor protein [Mycobacterium bovis BCG str. Tokyo 172] gi|253321124|gb|ACT25727.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 1435] gi|289415692|gb|EFD12932.1| conserved hypothetical protein [Mycobacterium tuberculosis T46] gi|289419887|gb|EFD17088.1| ATP-dependent Clp protease adaptor protein clpS [Mycobacterium tuberculosis CPHL_A] gi|289439509|gb|EFD22002.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 605] gi|289538428|gb|EFD43006.1| ATP-dependent Clp protease adaptor protein ClpS [Mycobacterium tuberculosis K85] gi|289685611|gb|EFD53099.1| ATP-dependent Clp protease adaptor protein ClpS [Mycobacterium tuberculosis 02_1987] gi|289690474|gb|EFD57903.1| conserved hypothetical protein [Mycobacterium tuberculosis T92] gi|289694000|gb|EFD61429.1| ATP-dependent Clp protease adapter protein clpS [Mycobacterium tuberculosis EAS054] gi|289708998|gb|EFD73014.1| ATP-dependent Clp protease adaptor protein clpS [Mycobacterium tuberculosis GM 1503] gi|289713000|gb|EFD77012.1| ATP-dependent Clp protease adapter protein clpS [Mycobacterium tuberculosis T85] gi|298494632|gb|EFI29926.1| ATP-dependent Clp protease adaptor protein ClpS [Mycobacterium tuberculosis 94_M4241A] gi|308215982|gb|EFO75381.1| hypothetical protein TMAG_03478 [Mycobacterium tuberculosis SUMu001] gi|308326489|gb|EFP15340.1| hypothetical protein TMBG_01162 [Mycobacterium tuberculosis SUMu002] gi|308331130|gb|EFP19981.1| hypothetical protein TMCG_00966 [Mycobacterium tuberculosis SUMu003] gi|308334971|gb|EFP23822.1| hypothetical protein TMDG_01214 [Mycobacterium tuberculosis SUMu004] gi|308338777|gb|EFP27628.1| hypothetical protein TMEG_01233 [Mycobacterium tuberculosis SUMu005] gi|308342418|gb|EFP31269.1| hypothetical protein TMFG_02526 [Mycobacterium tuberculosis SUMu006] gi|308346329|gb|EFP35180.1| hypothetical protein TMGG_01898 [Mycobacterium tuberculosis SUMu007] gi|308350252|gb|EFP39103.1| hypothetical protein TMHG_00518 [Mycobacterium tuberculosis SUMu008] gi|308354901|gb|EFP43752.1| hypothetical protein TMIG_03011 [Mycobacterium tuberculosis SUMu009] gi|308358845|gb|EFP47696.1| hypothetical protein TMJG_03719 [Mycobacterium tuberculosis SUMu010] gi|308362782|gb|EFP51633.1| hypothetical protein TMKG_01834 [Mycobacterium tuberculosis SUMu011] gi|308366429|gb|EFP55280.1| hypothetical protein TMLG_03423 [Mycobacterium tuberculosis SUMu012] gi|323720148|gb|EGB29251.1| hypothetical protein TMMG_02032 [Mycobacterium tuberculosis CDC1551A] gi|326902954|gb|EGE49887.1| hypothetical protein TBPG_00811 [Mycobacterium tuberculosis W-148] gi|328459367|gb|AEB04790.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 4207] Length = 101 Score = 54.0 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 29/62 (46%) Query: 63 LLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMN 122 ++ +D M +V +V Q F A +ML+VH++G + E E+ V+++ Sbjct: 31 IVWDDPVNLMSYVTYVFQKLFGYSEPHATKLMLQVHNEGKAVVSAGSRESMEVDVSKLHA 90 Query: 123 YS 124 Sbjct: 91 AG 92 >gi|325068392|ref|ZP_08127065.1| ATP-dependent Clp protease adaptor protein ClpS [Actinomyces oris K20] Length = 105 Score = 54.0 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 21/94 (22%), Positives = 39/94 (41%), Gaps = 6/94 (6%) Query: 44 LDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIG 103 + E+ S+ R +L+ ++ +D M +V V ++F A+ M++VH G Sbjct: 4 AEPEILEESRARTQRLWCTVVHDDPVNTMSYVTWVFHSYFGFSLPVAEARMMQVHTTGRA 63 Query: 104 ECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 A E E+ V + Y L+ +E Sbjct: 64 VVSQGARERMEVDVTAMH------GYGLRATIEP 91 >gi|166363445|ref|YP_001655718.1| ATP-dependent Clp protease adaptor [Microcystis aeruginosa NIES-843] gi|166085818|dbj|BAG00526.1| ATP-dependent Clp protease adaptor protein [Microcystis aeruginosa NIES-843] Length = 97 Score = 53.7 bits (128), Expect = 7e-06, Method: Composition-based stats. Identities = 17/76 (22%), Positives = 31/76 (40%), Gaps = 3/76 (3%) Query: 40 FDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFF-YKDHETAKCIMLKVH 98 LD + K Y+V+++ND++ + V + L + + A + +VH Sbjct: 5 PSTTLDKSTQVVKKTYP--NYKVIVLNDDFNTFDHVANCLIKYIPDMTTDRAWELTNQVH 62 Query: 99 HQGIGECGVYAYEIAE 114 +QG E AE Sbjct: 63 YQGQAIVWTGPQEQAE 78 >gi|256832121|ref|YP_003160848.1| ATP-dependent Clp protease adaptor protein ClpS [Jonesia denitrificans DSM 20603] gi|256685652|gb|ACV08545.1| ATP-dependent Clp protease adaptor protein ClpS [Jonesia denitrificans DSM 20603] Length = 99 Score = 53.7 bits (128), Expect = 7e-06, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 26/63 (41%) Query: 62 VLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVM 121 +++ ND M +V V +F A +M+ VH +G + E E V + Sbjct: 27 LIVWNDPVNLMNYVEWVFHTYFNYPRGQAHQLMMTVHTEGRAVVATGSREKIEFDVQAMH 86 Query: 122 NYS 124 NY Sbjct: 87 NYG 89 >gi|307150152|ref|YP_003885536.1| ATP-dependent Clp protease adaptor protein ClpS [Cyanothece sp. PCC 7822] gi|306980380|gb|ADN12261.1| ATP-dependent Clp protease adaptor protein ClpS [Cyanothece sp. PCC 7822] Length = 108 Score = 53.7 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 19/81 (23%), Positives = 32/81 (39%), Gaps = 2/81 (2%) Query: 35 KGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFF-YKDHETAKCI 93 K +A + K P Y+V+++ND++ E V L + + A + Sbjct: 10 KAMATAPTVAPDKTTQVVKKTYPN-YKVIVLNDDFNTFEHVAKCLMKYIPGMTSDRAWEL 68 Query: 94 MLKVHHQGIGECGVYAYEIAE 114 +VH +G V E AE Sbjct: 69 TNQVHFEGQAIVWVGPQEQAE 89 >gi|225166273|ref|ZP_03727970.1| ATP-dependent Clp protease adaptor protein ClpS [Opitutaceae bacterium TAV2] gi|224799486|gb|EEG18018.1| ATP-dependent Clp protease adaptor protein ClpS [Opitutaceae bacterium TAV2] Length = 110 Score = 53.7 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 20/88 (22%), Positives = 33/88 (37%) Query: 27 MADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKD 86 MAD N + + V+++ND M +++ VL+ D Sbjct: 1 MADDTHNHPFHPPASPQENPAAGTHLHPSPDGPWHVVIINDPVNLMSYLVLVLRKVLGID 60 Query: 87 HETAKCIMLKVHHQGIGECGVYAYEIAE 114 +TA+ M+ VH +G E AE Sbjct: 61 EDTARKHMMTVHEEGRSIVWTGLREKAE 88 >gi|313828232|gb|EFS65946.1| ATP-dependent Clp protease adaptor protein ClpS [Propionibacterium acnes HL063PA2] gi|315110454|gb|EFT82430.1| ATP-dependent Clp protease adaptor protein ClpS [Propionibacterium acnes HL030PA2] Length = 95 Score = 53.7 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 6/75 (8%) Query: 63 LLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMN 122 ++ +D M++V V +F E A +M++VH+QG + E EM+V V Sbjct: 23 VVWDDPVNLMDYVTMVFMRYFGYPRERATQLMIQVHNQGRVTVAEGSKE--EMEVA-VHA 79 Query: 123 YSRQHQYPLQCIMEQ 137 H Y LQ +E+ Sbjct: 80 M---HGYGLQASVEK 91 >gi|172038476|ref|YP_001804977.1| putative ATP-dependent Clp protease adaptor protein [Cyanothece sp. ATCC 51142] gi|171699930|gb|ACB52911.1| putative ATP-dependent Clp protease, adaptor protein [Cyanothece sp. ATCC 51142] Length = 108 Score = 53.7 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 13/61 (21%), Positives = 27/61 (44%), Gaps = 1/61 (1%) Query: 55 RVPKLYRVLLVNDNYTPMEFVIHVLQNFF-YKDHETAKCIMLKVHHQGIGECGVYAYEIA 113 + Y+V+++ND++ V + L + + A + +VH +G+ E A Sbjct: 29 KPYPNYKVIVLNDDFNTFNHVANCLMKYIPGMSSDRAWELTEQVHFEGLAIVWTGPQEQA 88 Query: 114 E 114 E Sbjct: 89 E 89 >gi|466913|gb|AAA50888.1| B1549_C2_207 [Mycobacterium leprae] Length = 94 Score = 53.7 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 30/62 (48%) Query: 63 LLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMN 122 ++ +D M +V +V Q F A +ML+VH++G + + E E+ V+++ Sbjct: 24 IVWDDPVNLMAYVTYVFQKLFGYSEPHATKLMLQVHNEGKAVVSMGSRESMEVDVSKLHA 83 Query: 123 YS 124 Sbjct: 84 AG 85 >gi|15827587|ref|NP_301850.1| ATP-dependent Clp protease adaptor protein ClpS [Mycobacterium leprae TN] gi|221230064|ref|YP_002503480.1| ATP-dependent Clp protease adaptor protein ClpS [Mycobacterium leprae Br4923] gi|13638637|sp|P53423|CLPS_MYCLE RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|13093138|emb|CAC31546.1| conserved hypothetical protein [Mycobacterium leprae] gi|219933171|emb|CAR71260.1| conserved hypothetical protein [Mycobacterium leprae Br4923] Length = 108 Score = 53.7 bits (128), Expect = 9e-06, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 30/62 (48%) Query: 63 LLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMN 122 ++ +D M +V +V Q F A +ML+VH++G + + E E+ V+++ Sbjct: 38 IVWDDPVNLMAYVTYVFQKLFGYSEPHATKLMLQVHNEGKAVVSMGSRESMEVDVSKLHA 97 Query: 123 YS 124 Sbjct: 98 AG 99 >gi|329947434|ref|ZP_08294638.1| ATP-dependent Clp protease adaptor protein ClpS [Actinomyces sp. oral taxon 170 str. F0386] gi|328525184|gb|EGF52235.1| ATP-dependent Clp protease adaptor protein ClpS [Actinomyces sp. oral taxon 170 str. F0386] Length = 111 Score = 53.7 bits (128), Expect = 9e-06, Method: Composition-based stats. Identities = 22/94 (23%), Positives = 38/94 (40%), Gaps = 6/94 (6%) Query: 44 LDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIG 103 + E+ S+ R +L+ ++ +D M +V V ++F A+ M++VH G Sbjct: 8 AEPEILEESRARAQRLWCTVVHDDPINTMSYVTWVFHSYFGFSLPVAEARMMRVHTTGRA 67 Query: 104 ECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 A E E V H Y L+ +E Sbjct: 68 VVSRGARERME---VDVTAM---HGYGLRATIEP 95 >gi|296139013|ref|YP_003646256.1| ATP-dependent Clp protease adaptor protein ClpS [Tsukamurella paurometabola DSM 20162] gi|296027147|gb|ADG77917.1| ATP-dependent Clp protease adaptor protein ClpS [Tsukamurella paurometabola DSM 20162] Length = 109 Score = 53.7 bits (128), Expect = 9e-06, Method: Composition-based stats. Identities = 19/100 (19%), Positives = 33/100 (33%), Gaps = 2/100 (2%) Query: 27 MADSRMNKKGIAEFDNCLDSEVRFSSKVRVP--KLYRVLLVNDNYTPMEFVIHVLQNFFY 84 M DS G S + K + ++ +D M +V V + F Sbjct: 1 MTDSSAAAPGSPGVSGQPGSAATLERETDRAIDKPWVTVVWDDPVNLMSYVTFVFRKVFG 60 Query: 85 KDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYS 124 AK +M++VH +G + E V ++ Sbjct: 61 YSTSKAKELMMQVHTEGKAVVSTGDRDKVEGDVRKLHAAG 100 >gi|295131202|ref|YP_003581865.1| ATP-dependent Clp protease adaptor protein ClpS [Propionibacterium acnes SK137] gi|291376050|gb|ADD99904.1| ATP-dependent Clp protease adaptor protein ClpS [Propionibacterium acnes SK137] Length = 95 Score = 53.7 bits (128), Expect = 9e-06, Method: Composition-based stats. Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 6/75 (8%) Query: 63 LLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMN 122 ++ +D M++V V +F E A +M++VH++G E EM+V V Sbjct: 23 VVWDDPVNLMDYVTMVFMRYFGYPRECATQLMIQVHYRGRATVAEGNKE--EMEVA-VHA 79 Query: 123 YSRQHQYPLQCIMEQ 137 H Y LQ +E+ Sbjct: 80 M---HGYGLQASVEK 91 >gi|269128072|ref|YP_003301442.1| ATP-dependent Clp protease adaptor protein ClpS [Thermomonospora curvata DSM 43183] gi|268313030|gb|ACY99404.1| ATP-dependent Clp protease adaptor protein ClpS [Thermomonospora curvata DSM 43183] Length = 97 Score = 53.3 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 27/62 (43%) Query: 63 LLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMN 122 ++ ND M +V +V Q F A+ +ML VHH+G E E V + + Sbjct: 27 IVWNDPINLMSYVTYVFQTVFGYPKPKAEKLMLDVHHKGRAVVASGGREEMERYVEILHS 86 Query: 123 YS 124 Y Sbjct: 87 YG 88 >gi|240169486|ref|ZP_04748145.1| hypothetical protein MkanA1_09246 [Mycobacterium kansasii ATCC 12478] Length = 101 Score = 53.3 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 29/62 (46%) Query: 63 LLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMN 122 ++ +D M +V +V Q F A +ML+VH++G + E E+ V+++ Sbjct: 31 VVWDDPVNLMSYVTYVFQKLFGYSEPHATKLMLQVHNEGKAVVSAGSREAMEVDVSKLHA 90 Query: 123 YS 124 Sbjct: 91 AG 92 >gi|186684201|ref|YP_001867397.1| ATP-dependent Clp protease adaptor [Nostoc punctiforme PCC 73102] gi|186466653|gb|ACC82454.1| ATP-dependent Clp protease adaptor protein ClpS [Nostoc punctiforme PCC 73102] Length = 108 Score = 53.3 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 14/58 (24%), Positives = 27/58 (46%), Gaps = 1/58 (1%) Query: 58 KLYRVLLVNDNYTPMEFVIHVLQNFF-YKDHETAKCIMLKVHHQGIGECGVYAYEIAE 114 Y+V+++ND++ + V L + + A + +VH++G V E AE Sbjct: 32 PNYKVIVLNDDFNTFQHVAECLMKYIPGMSGDRAWDLTNQVHYEGQAIVWVGPQEPAE 89 >gi|126656780|ref|ZP_01727994.1| ATP-dependent Clp protease adaptor protein ClpS [Cyanothece sp. CCY0110] gi|126622000|gb|EAZ92708.1| ATP-dependent Clp protease adaptor protein ClpS [Cyanothece sp. CCY0110] Length = 97 Score = 53.3 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 13/61 (21%), Positives = 27/61 (44%), Gaps = 1/61 (1%) Query: 55 RVPKLYRVLLVNDNYTPMEFVIHVLQNFF-YKDHETAKCIMLKVHHQGIGECGVYAYEIA 113 + Y+V+++ND++ V + L + + A + +VH +G+ E A Sbjct: 18 KPYPNYKVIVLNDDFNTFNHVANCLMKYIPGMSSDRAWELTEQVHFEGLAIVWTGPQEQA 77 Query: 114 E 114 E Sbjct: 78 E 78 >gi|296170273|ref|ZP_06851864.1| ATP-dependent Clp protease adapter protein ClpS [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295894996|gb|EFG74715.1| ATP-dependent Clp protease adapter protein ClpS [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 101 Score = 53.3 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 29/62 (46%) Query: 63 LLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMN 122 ++ +D M +V +V Q F A +ML+VH++G + E E+ V+++ Sbjct: 31 IVWDDPVNLMTYVTYVFQKLFGYSEPHATKLMLQVHNEGRAVVSAGSRESMEVDVSKLHA 90 Query: 123 YS 124 Sbjct: 91 AG 92 >gi|50843142|ref|YP_056369.1| hypothetical protein PPA1680 [Propionibacterium acnes KPA171202] gi|50840744|gb|AAT83411.1| conserved protein (DUF174) [Propionibacterium acnes KPA171202] gi|315106213|gb|EFT78189.1| ATP-dependent Clp protease adaptor protein ClpS [Propionibacterium acnes HL030PA1] Length = 198 Score = 53.3 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 12/49 (24%), Positives = 24/49 (48%) Query: 63 LLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYE 111 ++ +D M++V V +F E A +M++VH+QG + + Sbjct: 23 VVWDDPVNLMDYVTMVFMRYFGYPRERATQLMIQVHNQGRATVAEGSKD 71 >gi|224008955|ref|XP_002293436.1| predicted protein [Thalassiosira pseudonana CCMP1335] gi|220970836|gb|EED89172.1| predicted protein [Thalassiosira pseudonana CCMP1335] Length = 485 Score = 53.3 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 4/53 (7%) Query: 60 YRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEI 112 YR++L ND + E V VL+ + A IM++ H G G EI Sbjct: 409 YRIVLYNDRFNKRERVEGVLKEVASLNITEANKIMMEAHTLGRGVV----REI 457 >gi|41408527|ref|NP_961363.1| ATP-dependent Clp protease adaptor protein ClpS [Mycobacterium avium subsp. paratuberculosis K-10] gi|118463948|ref|YP_880786.1| ATP-dependent Clp protease adaptor protein ClpS [Mycobacterium avium 104] gi|67460344|sp|Q73X80|CLPS_MYCPA RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|158512435|sp|A0QCZ8|CLPS_MYCA1 RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|41396883|gb|AAS04746.1| hypothetical protein MAP_2429c [Mycobacterium avium subsp. paratuberculosis K-10] gi|118165235|gb|ABK66132.1| ATP-dependent Clp protease adaptor protein ClpS [Mycobacterium avium 104] Length = 105 Score = 53.3 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 16/93 (17%), Positives = 36/93 (38%) Query: 32 MNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAK 91 M+ + + + + + ++ +D M +V +V Q F A Sbjct: 4 MSAPTEPKSRPGTTGQRESAPEDVTASPWVTIVWDDPVNLMTYVTYVFQKLFGYSEPHAT 63 Query: 92 CIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYS 124 +ML+VH++G + E E+ V+++ Sbjct: 64 KLMLQVHNEGKAVVSAGSREAMEVDVSKLHAAG 96 >gi|298491120|ref|YP_003721297.1| ATP-dependent Clp protease adaptor protein ClpS ['Nostoc azollae' 0708] gi|298233038|gb|ADI64174.1| ATP-dependent Clp protease adaptor protein ClpS ['Nostoc azollae' 0708] Length = 108 Score = 53.3 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 14/58 (24%), Positives = 28/58 (48%), Gaps = 1/58 (1%) Query: 58 KLYRVLLVNDNYTPMEFVIHVLQNFF-YKDHETAKCIMLKVHHQGIGECGVYAYEIAE 114 Y+V+++ND++ ++V L + + A + +VH++G V E AE Sbjct: 32 PNYKVIVLNDDFNTFQYVAECLMKYIPGMSGDLAWDLTNQVHYEGQAIVWVGPQEPAE 89 >gi|314967388|gb|EFT11487.1| ATP-dependent Clp protease adaptor protein ClpS [Propionibacterium acnes HL082PA2] gi|314982107|gb|EFT26200.1| ATP-dependent Clp protease adaptor protein ClpS [Propionibacterium acnes HL110PA3] gi|315090346|gb|EFT62322.1| ATP-dependent Clp protease adaptor protein ClpS [Propionibacterium acnes HL110PA4] gi|315093629|gb|EFT65605.1| ATP-dependent Clp protease adaptor protein ClpS [Propionibacterium acnes HL060PA1] gi|327325469|gb|EGE67273.1| putative ATP-dependent Clp protease adaptor protein ClpS [Propionibacterium acnes HL103PA1] Length = 198 Score = 53.3 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 12/49 (24%), Positives = 24/49 (48%) Query: 63 LLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYE 111 ++ +D M++V V +F E A +M++VH+QG + + Sbjct: 23 VVWDDPVNLMDYVTMVFMRYFGYPRERATQLMIQVHNQGRATVAEGSKD 71 >gi|229821222|ref|YP_002882748.1| ATP-dependent Clp protease adaptor protein ClpS [Beutenbergia cavernae DSM 12333] gi|229567135|gb|ACQ80986.1| ATP-dependent Clp protease adaptor protein ClpS [Beutenbergia cavernae DSM 12333] Length = 113 Score = 53.3 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 21/98 (21%), Positives = 39/98 (39%) Query: 27 MADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKD 86 M +R + E + VR + + ++ ND M +V +V Q +F Sbjct: 6 MTGARAVVASTSPVSPTPTQERAGETAVRHDRPWHTIVWNDPVNLMSYVTYVFQTYFGYS 65 Query: 87 HETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYS 124 A+ +M +VH +G + E E+ V + +Y Sbjct: 66 RAKAEKLMRQVHTEGKSIVSHGSRERMEVDVQAMHSYG 103 >gi|314924274|gb|EFS88105.1| ATP-dependent Clp protease adaptor protein ClpS [Propionibacterium acnes HL001PA1] Length = 198 Score = 52.9 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 12/49 (24%), Positives = 24/49 (48%) Query: 63 LLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYE 111 ++ +D M++V V +F E A +M++VH+QG + + Sbjct: 23 VVWDDPVNLMDYVTMVFMRYFGYPRERATQLMIQVHNQGRATVVEGSKD 71 >gi|159031002|emb|CAO88704.1| clpS [Microcystis aeruginosa PCC 7806] Length = 97 Score = 52.9 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 14/58 (24%), Positives = 27/58 (46%), Gaps = 1/58 (1%) Query: 58 KLYRVLLVNDNYTPMEFVIHVLQNFF-YKDHETAKCIMLKVHHQGIGECGVYAYEIAE 114 Y+V+++ND++ + V + L + + A + +VH+QG E AE Sbjct: 21 PNYKVIVLNDDFNTFDHVANCLIKYIPDMTTDRAWELTNQVHYQGQAIVWTGPQEPAE 78 >gi|326385034|ref|ZP_08206706.1| ATP-dependent Clp protease adaptor protein ClpS [Gordonia neofelifaecis NRRL B-59395] gi|326196248|gb|EGD53450.1| ATP-dependent Clp protease adaptor protein ClpS [Gordonia neofelifaecis NRRL B-59395] Length = 85 Score = 52.9 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 15/55 (27%), Positives = 26/55 (47%) Query: 51 SSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGEC 105 +V + + L+ +D M +V +V Q F E AK +M++VH +G Sbjct: 3 EPEVTHDRPWVTLVWDDPVNLMNYVAYVFQKVFGYSEEKAKALMMQVHTEGKAVV 57 >gi|300864591|ref|ZP_07109450.1| ATP-dependent Clp protease adaptor [Oscillatoria sp. PCC 6506] gi|300337415|emb|CBN54598.1| ATP-dependent Clp protease adaptor [Oscillatoria sp. PCC 6506] Length = 97 Score = 52.9 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 18/68 (26%), Positives = 31/68 (45%), Gaps = 2/68 (2%) Query: 49 RFSSKVRVP-KLYRVLLVNDNYTPMEFVIHVLQNFF-YKDHETAKCIMLKVHHQGIGECG 106 R S R P Y+V+++ND++ + V L + + A + +VH++G Sbjct: 11 RSSQVTRKPYPNYKVIVLNDDFNTFQHVSECLVKYIPGMTSDRAWKLTNQVHYEGQATVW 70 Query: 107 VYAYEIAE 114 V E AE Sbjct: 71 VGPQEQAE 78 >gi|119510612|ref|ZP_01629742.1| ATP-dependent Clp protease adaptor protein ClpS [Nodularia spumigena CCY9414] gi|119464773|gb|EAW45680.1| ATP-dependent Clp protease adaptor protein ClpS [Nodularia spumigena CCY9414] Length = 108 Score = 52.9 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 13/58 (22%), Positives = 28/58 (48%), Gaps = 1/58 (1%) Query: 58 KLYRVLLVNDNYTPMEFVIHVLQNFF-YKDHETAKCIMLKVHHQGIGECGVYAYEIAE 114 Y+V+++ND++ + V L + + A + ++H++G V E+AE Sbjct: 32 PNYKVIVLNDDFNTFQHVSECLMKYIPGMTGDRAWDLTNQIHYEGQAIVWVGPQEMAE 89 >gi|314956858|gb|EFT01012.1| ATP-dependent Clp protease adaptor protein ClpS [Propionibacterium acnes HL027PA1] Length = 95 Score = 52.9 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 6/75 (8%) Query: 63 LLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMN 122 ++ +D M++V V +F E A +M++VH+Q + E EM+V V Sbjct: 23 VVWDDPVNLMDYVTMVFMRYFGYPRERATQLMIQVHNQDRATVAEGSKE--EMEVA-VHA 79 Query: 123 YSRQHQYPLQCIMEQ 137 H Y LQ +E+ Sbjct: 80 M---HGYGLQASVEK 91 >gi|172041152|ref|YP_001800866.1| hypothetical protein cur_1472 [Corynebacterium urealyticum DSM 7109] gi|171852456|emb|CAQ05432.1| conserved hypothetical protein [Corynebacterium urealyticum DSM 7109] Length = 138 Score = 52.9 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 17/92 (18%), Positives = 34/92 (36%), Gaps = 6/92 (6%) Query: 46 SEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGEC 105 +E R + ++ + +D M +V +V + + A +M++VH +G Sbjct: 50 AEKRPETLTDADLPWQCICWDDPVNLMSYVTYVFETVLGYSRKKATELMMRVHTEGKAVV 109 Query: 106 GVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 + E V ++ L MEQ Sbjct: 110 SSGERDKVEGDVKKLHTAG------LWATMEQ 135 >gi|226307371|ref|YP_002767331.1| ATP-dependent Clp protease adaptor protein ClpS [Rhodococcus erythropolis PR4] gi|226186488|dbj|BAH34592.1| putative ATP-dependent Clp protease adaptor protein ClpS [Rhodococcus erythropolis PR4] Length = 103 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 14/93 (15%), Positives = 33/93 (35%) Query: 32 MNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAK 91 M + + ++ + + ++ +D M +V +V Q F A Sbjct: 1 MRGTTASSPQATPEQSEAVATIEAADRPWVTIVWDDPVNLMHYVTYVFQKLFGYSKAKAT 60 Query: 92 CIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYS 124 +M++VH +G + + E V ++ Sbjct: 61 DLMMQVHSEGKAVVSSGSRDKMEADVRRLHAAG 93 >gi|119490026|ref|ZP_01622650.1| ATP-dependent Clp protease adaptor protein ClpS [Lyngbya sp. PCC 8106] gi|119454178|gb|EAW35330.1| ATP-dependent Clp protease adaptor protein ClpS [Lyngbya sp. PCC 8106] Length = 97 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 18/68 (26%), Positives = 31/68 (45%), Gaps = 2/68 (2%) Query: 49 RFSSKVRVP-KLYRVLLVNDNYTPMEFVIHVLQNFF-YKDHETAKCIMLKVHHQGIGECG 106 R S + P Y+V+++ND++ E V L + + + A + +VH +G Sbjct: 11 RSSQVTQQPYPNYKVIVLNDDFNTFEHVSSCLMKYIPGMNSDLAWKLTNQVHFEGQATVW 70 Query: 107 VYAYEIAE 114 V E AE Sbjct: 71 VGPLEQAE 78 >gi|54023053|ref|YP_117295.1| ATP-dependent Clp protease adaptor protein ClpS [Nocardia farcinica IFM 10152] gi|67460226|sp|Q5Z0W0|CLPS_NOCFA RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|54014561|dbj|BAD55931.1| hypothetical protein [Nocardia farcinica IFM 10152] Length = 106 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 13/67 (19%), Positives = 29/67 (43%) Query: 58 KLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKV 117 + + ++ +D M +V ++ Q F A +ML+VH++G + + E V Sbjct: 31 RPWVTVVWDDPVNLMHYVTYIFQKLFGYSKAKATELMLQVHNEGKAVVSSGSRDKMEHDV 90 Query: 118 NQVMNYS 124 ++ Sbjct: 91 RRLHAAG 97 >gi|256824919|ref|YP_003148879.1| hypothetical protein Ksed_10700 [Kytococcus sedentarius DSM 20547] gi|256688312|gb|ACV06114.1| uncharacterized conserved protein [Kytococcus sedentarius DSM 20547] Length = 86 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 2/59 (3%) Query: 63 LLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAE--MKVNQ 119 L+ ND M +V VL + F TA+ +M+ +H +G + E E K Q Sbjct: 16 LVWNDPVNLMSYVTFVLMDHFGYPQRTAEAMMMDIHTKGRCVVSTGSREAMEVDTKAMQ 74 >gi|312199648|ref|YP_004019709.1| ATP-dependent Clp protease adaptor protein ClpS [Frankia sp. EuI1c] gi|311230984|gb|ADP83839.1| ATP-dependent Clp protease adaptor protein ClpS [Frankia sp. EuI1c] Length = 96 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 20/88 (22%), Positives = 34/88 (38%), Gaps = 6/88 (6%) Query: 48 VRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGV 107 + + + ++ ND M +V +V Q F D TA+ +ML VH +G Sbjct: 12 EEIEEALSDDRPWVTIVWNDPINLMSYVTYVFQKLFGYDRPTARKLMLDVHEKGRASVSN 71 Query: 108 YAYEIAEMKVNQVMNYSRQHQYPLQCIM 135 + E + +R H Y L + Sbjct: 72 GTRDEME------RDAARLHTYGLWATV 93 >gi|300777810|ref|ZP_07087668.1| ATP-dependent Clp protease adaptor protein ClpS [Chryseobacterium gleum ATCC 35910] gi|300503320|gb|EFK34460.1| ATP-dependent Clp protease adaptor protein ClpS [Chryseobacterium gleum ATCC 35910] Length = 101 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 12/53 (22%), Positives = 25/53 (47%) Query: 60 YRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEI 112 Y+++L ND+ ++VI L E A+ + VH++G + ++ Sbjct: 31 YKLVLHNDDIHTFDYVIDCLIEICKHTLEQAEQCTILVHYKGKCTVKTGSMDV 83 >gi|218246561|ref|YP_002371932.1| ATP-dependent Clp protease adaptor protein ClpS [Cyanothece sp. PCC 8801] gi|257059601|ref|YP_003137489.1| ATP-dependent Clp protease adaptor protein ClpS [Cyanothece sp. PCC 8802] gi|218167039|gb|ACK65776.1| ATP-dependent Clp protease adaptor protein ClpS [Cyanothece sp. PCC 8801] gi|256589767|gb|ACV00654.1| ATP-dependent Clp protease adaptor protein ClpS [Cyanothece sp. PCC 8802] Length = 97 Score = 52.1 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 15/61 (24%), Positives = 27/61 (44%), Gaps = 1/61 (1%) Query: 55 RVPKLYRVLLVNDNYTPMEFVIHVLQNFF-YKDHETAKCIMLKVHHQGIGECGVYAYEIA 113 + Y+V+++ND++ E V L + + A + +VH +G V E A Sbjct: 18 KPYPNYKVIVLNDDFNSFEHVAKCLMTYIPGMTSDRAWELTNQVHFEGQATVWVGPQEQA 77 Query: 114 E 114 E Sbjct: 78 E 78 >gi|227542814|ref|ZP_03972863.1| ATP-dependent Clp protease adaptor protein ClpS [Corynebacterium glucuronolyticum ATCC 51866] gi|227181440|gb|EEI62412.1| ATP-dependent Clp protease adaptor protein ClpS [Corynebacterium glucuronolyticum ATCC 51866] Length = 100 Score = 52.1 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 19/93 (20%), Positives = 35/93 (37%), Gaps = 4/93 (4%) Query: 32 MNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAK 91 M +A D +D EV S + + ++ +D M +V HV + A Sbjct: 3 MPASPLATPDVDVDVEVATSENLP----WMCIVWDDPVNLMSYVTHVFMTMLGYSRKRAT 58 Query: 92 CIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYS 124 +M++VH +G + E V ++ Sbjct: 59 ELMMQVHTEGKAVVSSGERDKVEADVKKMHTAG 91 >gi|312139203|ref|YP_004006539.1| ATP-dependent clp protease adaptor protein clps [Rhodococcus equi 103S] gi|325673491|ref|ZP_08153182.1| ATP-dependent Clp protease adaptor protein ClpS [Rhodococcus equi ATCC 33707] gi|311888542|emb|CBH47854.1| ATP-dependent Clp protease adaptor protein ClpS [Rhodococcus equi 103S] gi|325555512|gb|EGD25183.1| ATP-dependent Clp protease adaptor protein ClpS [Rhodococcus equi ATCC 33707] Length = 118 Score = 52.1 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 15/101 (14%), Positives = 35/101 (34%), Gaps = 3/101 (2%) Query: 24 FIFMADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFF 83 + +M + E ++ R + ++ +D M +V ++ Q F Sbjct: 11 PTTLPVGKMPAAAPQVSPAEAEIEETVEAQDRP---WVTVVWDDPVNLMHYVTYIFQKLF 67 Query: 84 YKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYS 124 A +M++VH +G + + E V ++ Sbjct: 68 GYSKAKATDLMMQVHKEGKAVVSSGSRDKVENDVRKLHAAG 108 >gi|228472184|ref|ZP_04056950.1| ATP-dependent Clp protease adaptor protein ClpS [Capnocytophaga gingivalis ATCC 33624] gi|228276387|gb|EEK15111.1| ATP-dependent Clp protease adaptor protein ClpS [Capnocytophaga gingivalis ATCC 33624] Length = 96 Score = 52.1 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 16/75 (21%), Positives = 31/75 (41%) Query: 37 IAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLK 96 + + E + + Y+++L ND+Y ++VI +L +E A+ + Sbjct: 1 MPQTQPTPQKESQEELLTQQADNYQIMLYNDDYNTFDYVIELLIEICDHTYEQAEQCAVL 60 Query: 97 VHHQGIGECGVYAYE 111 VH G +YE Sbjct: 61 VHFSGKCPVKEGSYE 75 >gi|38234427|ref|NP_940194.1| ATP-dependent Clp protease adaptor protein ClpS [Corynebacterium diphtheriae NCTC 13129] gi|67460296|sp|Q6NFN0|CLPS_CORDI RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|38200690|emb|CAE50386.1| Conserved hypothetical protein [Corynebacterium diphtheriae] Length = 113 Score = 52.1 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 16/89 (17%), Positives = 32/89 (35%), Gaps = 4/89 (4%) Query: 36 GIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIML 95 D + EV S + + ++ +D M +V +V Q + A +M+ Sbjct: 20 ATPSLDEEMAVEVASSENLP----WMCIVWDDPVNLMSYVTYVFQTILGYSKKRATELMM 75 Query: 96 KVHHQGIGECGVYAYEIAEMKVNQVMNYS 124 +VH +G + E V ++ Sbjct: 76 QVHTEGKAVVSSGERDKVEADVKKLHTAG 104 >gi|118619139|ref|YP_907471.1| hypothetical protein MUL_3931 [Mycobacterium ulcerans Agy99] gi|118571249|gb|ABL06000.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99] Length = 70 Score = 52.1 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 15/61 (24%), Positives = 28/61 (45%) Query: 64 LVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNY 123 + +D M +V +V Q F A +ML+VH++G + E E+ V+++ Sbjct: 1 MWDDPVNLMTYVTYVFQKLFGYSEPHATKLMLQVHNEGRAVVSAGSREAMEVDVSKLHAA 60 Query: 124 S 124 Sbjct: 61 G 61 >gi|317124454|ref|YP_004098566.1| ATP-dependent Clp protease adaptor protein ClpS [Intrasporangium calvum DSM 43043] gi|315588542|gb|ADU47839.1| ATP-dependent Clp protease adaptor protein ClpS [Intrasporangium calvum DSM 43043] Length = 107 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 13/69 (18%), Positives = 24/69 (34%) Query: 43 CLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGI 102 + V + ++ ND M +V V + +F A+ +M+ VH +G Sbjct: 17 ETEEVTGTDDLVAPDVPWVTIVWNDPVNLMSYVTWVFETYFGYPRPKAEKLMMDVHTKGR 76 Query: 103 GECGVYAYE 111 E Sbjct: 77 AVVSHGPRE 85 >gi|315606163|ref|ZP_07881191.1| ATP-dependent Clp protease adaptor protein ClpS [Actinomyces sp. oral taxon 180 str. F0310] gi|315312121|gb|EFU60210.1| ATP-dependent Clp protease adaptor protein ClpS [Actinomyces sp. oral taxon 180 str. F0310] Length = 95 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 19/96 (19%), Positives = 36/96 (37%), Gaps = 6/96 (6%) Query: 42 NCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQG 101 L R +R ++ +D M +V V + +F A+ +M++VH +G Sbjct: 3 TILQPAPRAHEAASAVPRWRAVVWDDPVNLMTYVTAVFREYFGYSTARAEELMMRVHTRG 62 Query: 102 IGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 E E V + +Y L+ +E+ Sbjct: 63 RATVSTGVRERIEADVMAMHSYG------LRATLEE 92 >gi|326330823|ref|ZP_08197124.1| ATP-dependent Clp protease adaptor protein ClpS [Nocardioidaceae bacterium Broad-1] gi|325951353|gb|EGD43392.1| ATP-dependent Clp protease adaptor protein ClpS [Nocardioidaceae bacterium Broad-1] Length = 91 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 19/92 (20%), Positives = 36/92 (39%), Gaps = 6/92 (6%) Query: 47 EVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECG 106 E V + ++ ND M +V V Q +F + ++ +M++VH+ G Sbjct: 5 EPEVDDLVAPATPWVTIVWNDPVNLMSYVTFVFQKYFGYSKKKSEKLMMEVHNDGKSAVS 64 Query: 107 VYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 + E E V + Y L +E++ Sbjct: 65 SGSREEMERDVQAMHEYG------LWATLEKQ 90 >gi|256371012|ref|YP_003108836.1| ATP-dependent Clp protease adaptor protein ClpS [Acidimicrobium ferrooxidans DSM 10331] gi|256007596|gb|ACU53163.1| ATP-dependent Clp protease adaptor protein ClpS [Acidimicrobium ferrooxidans DSM 10331] Length = 96 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 17/81 (20%), Positives = 36/81 (44%), Gaps = 2/81 (2%) Query: 44 LDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIG 103 ++SE ++ + +L +D + +VI+VLQ F A + ++VH++G Sbjct: 10 VESEEVAETRTEE--SWATILWDDPVNLISYVIYVLQATFAFSKVKATELTMQVHNEGKA 67 Query: 104 ECGVYAYEIAEMKVNQVMNYS 124 + E E +++ Y Sbjct: 68 IVATGSREDMEDAASKLHAYG 88 >gi|296129169|ref|YP_003636419.1| ATP-dependent Clp protease adaptor protein ClpS [Cellulomonas flavigena DSM 20109] gi|296020984|gb|ADG74220.1| ATP-dependent Clp protease adaptor protein ClpS [Cellulomonas flavigena DSM 20109] Length = 100 Score = 51.7 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 18/83 (21%), Positives = 31/83 (37%) Query: 42 NCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQG 101 D+ + ++ ND M +V +V Q F E A+ +M +VH +G Sbjct: 8 TAPDTRPDVDEASSTADAWVTIVWNDPVNLMTYVTYVFQTHFGYAREKAERLMRQVHEEG 67 Query: 102 IGECGVYAYEIAEMKVNQVMNYS 124 E E+ V + +Y Sbjct: 68 RAVVSTGNREAMEVDVQAMHSYG 90 >gi|289569343|ref|ZP_06449570.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Mycobacterium tuberculosis T17] gi|289543097|gb|EFD46745.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Mycobacterium tuberculosis T17] Length = 73 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 12/43 (27%), Positives = 21/43 (48%) Query: 63 LLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGEC 105 ++ +D M +V +V Q F A +ML+VH++G Sbjct: 31 IVWDDPVNLMSYVTYVFQKLFGYSEPHATKLMLQVHNEGKAVV 73 >gi|227494816|ref|ZP_03925132.1| ATP-dependent Clp protease adaptor protein [Actinomyces coleocanis DSM 15436] gi|226831268|gb|EEH63651.1| ATP-dependent Clp protease adaptor protein [Actinomyces coleocanis DSM 15436] Length = 102 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 20/75 (26%), Positives = 29/75 (38%), Gaps = 6/75 (8%) Query: 63 LLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMN 122 ++ ND M++V V Q F A +ML+VH G E E V+ Sbjct: 28 VVWNDPINLMDYVQAVFQRHFGFSQARAHELMLQVHLTGRALVSKGPKERME---ADVLA 84 Query: 123 YSRQHQYPLQCIMEQ 137 H Y L+ +E Sbjct: 85 M---HGYGLRSTLEP 96 >gi|224007869|ref|XP_002292894.1| predicted protein [Thalassiosira pseudonana CCMP1335] gi|220971756|gb|EED90090.1| predicted protein [Thalassiosira pseudonana CCMP1335] Length = 164 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 18/83 (21%), Positives = 32/83 (38%) Query: 32 MNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAK 91 +++ + D + + Y + L +DN E+V L + A Sbjct: 61 LDRPSTFQPQKSTDYDQTTDDALNPDGPYTLRLFDDNLNTKEWVARSLVYVVGLCEQDAY 120 Query: 92 CIMLKVHHQGIGECGVYAYEIAE 114 M + H GI + G Y ++IAE Sbjct: 121 AKMTEAHTMGIAKVGDYRFDIAE 143 >gi|111018445|ref|YP_701417.1| ATP-dependent Clp protease adaptor protein ClpS [Rhodococcus jostii RHA1] gi|122956016|sp|Q0SGS7|CLPS_RHOSR RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|110817975|gb|ABG93259.1| possible ATP-dependent Clp protease adaptor protein ClpS [Rhodococcus jostii RHA1] Length = 112 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 12/67 (17%), Positives = 28/67 (41%) Query: 58 KLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKV 117 + + ++ +D M +V ++ Q F A +M++VH +G + + E V Sbjct: 36 RPWVTVVWDDPVNLMHYVTYIFQKLFGYSKAKATELMMQVHSEGKAVVSSGSRDKVENDV 95 Query: 118 NQVMNYS 124 ++ Sbjct: 96 RKLHAAG 102 >gi|226360564|ref|YP_002778342.1| ATP-dependent Clp protease adaptor protein ClpS [Rhodococcus opacus B4] gi|254763822|sp|C1AVW7|CLPS_RHOOB RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|226239049|dbj|BAH49397.1| putative ATP-dependent Clp protease adaptor protein ClpS [Rhodococcus opacus B4] Length = 112 Score = 51.3 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 12/67 (17%), Positives = 28/67 (41%) Query: 58 KLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKV 117 + + ++ +D M +V ++ Q F A +M++VH +G + + E V Sbjct: 36 RPWVTVVWDDPVNLMHYVTYIFQKLFGYSKARATELMMQVHSEGKAVVSSGSRDKVENDV 95 Query: 118 NQVMNYS 124 ++ Sbjct: 96 RKLHAAG 102 >gi|291299382|ref|YP_003510660.1| ATP-dependent Clp protease adaptor protein ClpS [Stackebrandtia nassauensis DSM 44728] gi|290568602|gb|ADD41567.1| ATP-dependent Clp protease adaptor protein ClpS [Stackebrandtia nassauensis DSM 44728] Length = 119 Score = 51.0 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 17/80 (21%), Positives = 33/80 (41%) Query: 45 DSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGE 104 ++ + + ++ ND M +V +V Q++F A+ +ML VH++G+ Sbjct: 31 ETVTDAAETPEADAPWVTIVRNDPVNLMSYVSYVFQSYFGYTRPKAEELMLDVHNKGLAV 90 Query: 105 CGVYAYEIAEMKVNQVMNYS 124 E E V + Y Sbjct: 91 VSSGNREEMERDVQAMHGYG 110 >gi|297625964|ref|YP_003687727.1| ATP-dependent Clp protease adaptor protein clpS [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] gi|296921729|emb|CBL56287.1| ATP-dependent Clp protease adaptor protein clpS [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] Length = 103 Score = 51.0 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 30/62 (48%) Query: 63 LLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMN 122 ++ +D M +V HV ++F+ + A+ +M++VH +G E E VN + Sbjct: 33 VVWDDPVNLMSYVTHVFCSYFHYSRDRAERLMMQVHMEGKAVVSSGGREEMERDVNAMHG 92 Query: 123 YS 124 + Sbjct: 93 FG 94 >gi|218441397|ref|YP_002379726.1| ATP-dependent Clp protease adaptor [Cyanothece sp. PCC 7424] gi|218174125|gb|ACK72858.1| ATP-dependent Clp protease adaptor protein ClpS [Cyanothece sp. PCC 7424] Length = 108 Score = 51.0 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 14/58 (24%), Positives = 28/58 (48%), Gaps = 1/58 (1%) Query: 58 KLYRVLLVNDNYTPMEFVIHVLQNFF-YKDHETAKCIMLKVHHQGIGECGVYAYEIAE 114 Y+V+++ND++ + V + L + + A + +VH++G V E AE Sbjct: 32 PNYKVIVLNDDFNTFQHVANCLMKYIPGMTSDRAWELTNQVHYEGQATVWVGPQEQAE 89 >gi|110637456|ref|YP_677663.1| hypothetical protein CHU_1046 [Cytophaga hutchinsonii ATCC 33406] gi|110280137|gb|ABG58323.1| conserved hypothetical protein [Cytophaga hutchinsonii ATCC 33406] Length = 99 Score = 51.0 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 14/61 (22%), Positives = 28/61 (45%) Query: 45 DSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGE 104 + +V +V+ + +++ ND+ E VI VL + E A+ L +H++G Sbjct: 14 EEDVALMEEVQTSDMNDLVVYNDDVNTFEHVIQVLMSVCGHSPEQAEQCTLLIHYKGKCT 73 Query: 105 C 105 Sbjct: 74 V 74 >gi|154507592|ref|ZP_02043234.1| hypothetical protein ACTODO_00072 [Actinomyces odontolyticus ATCC 17982] gi|293189261|ref|ZP_06607984.1| ATP-dependent Clp protease adaptor protein ClpS [Actinomyces odontolyticus F0309] gi|153797226|gb|EDN79646.1| hypothetical protein ACTODO_00072 [Actinomyces odontolyticus ATCC 17982] gi|292821724|gb|EFF80660.1| ATP-dependent Clp protease adaptor protein ClpS [Actinomyces odontolyticus F0309] Length = 95 Score = 51.0 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 18/96 (18%), Positives = 35/96 (36%), Gaps = 6/96 (6%) Query: 42 NCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQG 101 R +R ++ +D M +V V + +F + A+ +M+ VH +G Sbjct: 3 TMFQPASRTHEAPTAVPRWRAVVWDDPVNLMSYVSAVFRQYFGYSNARAEELMMAVHTRG 62 Query: 102 IGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 E E V + +Y L+ +E+ Sbjct: 63 RATVSTGVRERIEADVMAMHSYG------LRATIEE 92 >gi|325106171|ref|YP_004275825.1| ATP-dependent Clp protease adaptor protein ClpS [Pedobacter saltans DSM 12145] gi|324975019|gb|ADY54003.1| ATP-dependent Clp protease adaptor protein ClpS [Pedobacter saltans DSM 12145] Length = 98 Score = 51.0 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 16/68 (23%), Positives = 30/68 (44%) Query: 36 GIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIML 95 +A+ + ++ + K +R++L ND+ E VIH L ++ A+ I Sbjct: 4 NMADVETKEETFTLEEILTSLKKSHRLILWNDDTNTFEHVIHCLCHYLDYSESEAEKIAW 63 Query: 96 KVHHQGIG 103 VH +G Sbjct: 64 TVHTKGKC 71 >gi|149277214|ref|ZP_01883356.1| hypothetical protein PBAL39_10001 [Pedobacter sp. BAL39] gi|149232091|gb|EDM37468.1| hypothetical protein PBAL39_10001 [Pedobacter sp. BAL39] Length = 115 Score = 51.0 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 13/73 (17%), Positives = 30/73 (41%), Gaps = 2/73 (2%) Query: 39 EFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVH 98 + ++ + ++R++L ND+ + VIH + + A+ I +VH Sbjct: 24 STETKEETFTLEEILTSLKTIHRLILWNDDVNTFDHVIHCMMKYLDYSESQAEKIAWEVH 83 Query: 99 HQGIGEC--GVYA 109 ++G G + Sbjct: 84 NKGKCAVLEGSFT 96 >gi|227488216|ref|ZP_03918532.1| ATP-dependent Clp protease adaptor protein ClpS [Corynebacterium glucuronolyticum ATCC 51867] gi|227091786|gb|EEI27098.1| ATP-dependent Clp protease adaptor protein ClpS [Corynebacterium glucuronolyticum ATCC 51867] Length = 100 Score = 51.0 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 19/93 (20%), Positives = 35/93 (37%), Gaps = 4/93 (4%) Query: 32 MNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAK 91 M +A D +D EV S + + ++ +D M +V HV + A Sbjct: 3 MPALPLATPDVDVDVEVATSENLP----WMCIVWDDPVNLMSYVTHVFMTMLGYSRKRAT 58 Query: 92 CIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYS 124 +M++VH +G + E V ++ Sbjct: 59 ELMMQVHTEGKAVVSSGERDKVEADVKKMHTAG 91 >gi|302834902|ref|XP_002949013.1| hypothetical protein VOLCADRAFT_73976 [Volvox carteri f. nagariensis] gi|300265758|gb|EFJ49948.1| hypothetical protein VOLCADRAFT_73976 [Volvox carteri f. nagariensis] Length = 160 Score = 50.6 bits (120), Expect = 6e-05, Method: Composition-based stats. Identities = 21/86 (24%), Positives = 35/86 (40%), Gaps = 2/86 (2%) Query: 31 RMNKKGIAEFDNCL-DSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYK-DHE 88 R G+ + + + + P +Y+V L NDNY E+V+ VL + + Sbjct: 55 RAGVPGLLDSPTITSEPQQGTDRAYKRPPIYKVFLHNDNYNKREYVVKVLLKVVEEITVD 114 Query: 89 TAKCIMLKVHHQGIGECGVYAYEIAE 114 A +M + H G+ E AE Sbjct: 115 DAVTVMQEAHETGVALVVACPQENAE 140 >gi|255324319|ref|ZP_05365440.1| ATP-dependent Clp protease adaptor protein ClpS [Corynebacterium tuberculostearicum SK141] gi|255298649|gb|EET77945.1| ATP-dependent Clp protease adaptor protein ClpS [Corynebacterium tuberculostearicum SK141] Length = 114 Score = 50.6 bits (120), Expect = 6e-05, Method: Composition-based stats. Identities = 23/107 (21%), Positives = 43/107 (40%), Gaps = 8/107 (7%) Query: 13 VKRDGILALMSFIFMADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPM 72 V+ +G+ A + M+ E D LD +V S + + ++ +D M Sbjct: 2 VRLEGMKAQFPVVRMSSPM----ATPELDEELDVDVATSENLP----WMCIVWDDPVNLM 53 Query: 73 EFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQ 119 +V +V Q D + A +M++VH +G + E V + Sbjct: 54 SYVSYVFQTVLGYDKKRANELMMQVHTEGKAAVSSGERDKIEADVKK 100 >gi|254495168|ref|ZP_05108092.1| ATP-dependent Clp protease adaptor protein ClpS [Polaribacter sp. MED152] gi|85819519|gb|EAQ40676.1| ATP-dependent Clp protease adaptor protein ClpS [Polaribacter sp. MED152] Length = 91 Score = 50.6 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 13/46 (28%), Positives = 22/46 (47%) Query: 60 YRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGEC 105 + ++L ND+ +FVI L N E A+ + VH++G Sbjct: 21 HEIVLHNDDVNTFDFVIESLINVCDHTLEQAEQCTILVHYKGKCTV 66 >gi|67924463|ref|ZP_00517887.1| ATP-dependent Clp protease adaptor protein ClpS [Crocosphaera watsonii WH 8501] gi|67853690|gb|EAM49025.1| ATP-dependent Clp protease adaptor protein ClpS [Crocosphaera watsonii WH 8501] Length = 108 Score = 50.6 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 13/74 (17%), Positives = 29/74 (39%), Gaps = 1/74 (1%) Query: 42 NCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFF-YKDHETAKCIMLKVHHQ 100 + + + Y+V+++ND++ + V L + + A + +VH + Sbjct: 16 TSTAPKGATVVERKRYPNYKVIVLNDDFNTFDHVAKCLLKYIPGMSSDRAWELTEQVHFE 75 Query: 101 GIGECGVYAYEIAE 114 G+ E AE Sbjct: 76 GLATVWTGPQEQAE 89 >gi|158337023|ref|YP_001518198.1| ATP-dependent Clp protease adaptor protein ClpS [Acaryochloris marina MBIC11017] gi|158307264|gb|ABW28881.1| ATP-dependent Clp protease adaptor protein ClpS [Acaryochloris marina MBIC11017] Length = 98 Score = 50.6 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 16/72 (22%), Positives = 31/72 (43%), Gaps = 3/72 (4%) Query: 46 SEVRFSSKV--RVPKLYRVLLVNDNYTPMEFVIHVLQNFF-YKDHETAKCIMLKVHHQGI 102 E + + K + ++V++VND+ E V L + + + A + ++H +G Sbjct: 8 PEEKQAQKTVRKPYPNFKVIVVNDDVNTFEHVAKTLMTYIPHMTSDKAWELTNQIHFEGQ 67 Query: 103 GECGVYAYEIAE 114 V E AE Sbjct: 68 AIVWVGPQEQAE 79 >gi|150025727|ref|YP_001296553.1| hypothetical protein FP1679 [Flavobacterium psychrophilum JIP02/86] gi|149772268|emb|CAL43746.1| Protein of unknown function [Flavobacterium psychrophilum JIP02/86] Length = 91 Score = 50.2 bits (119), Expect = 8e-05, Method: Composition-based stats. Identities = 11/51 (21%), Positives = 23/51 (45%) Query: 61 RVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYE 111 ++L ND+ + VI+ L + + A+ L VH++G ++ Sbjct: 22 EIVLFNDDVNTFDHVINTLIRVCHHEELQAEQCALLVHYKGKCVVKTGTFD 72 >gi|50954981|ref|YP_062269.1| ATP-dependent Clp protease adaptor protein ClpS [Leifsonia xyli subsp. xyli str. CTCB07] gi|50951463|gb|AAT89164.1| conserved hypothetical protein [Leifsonia xyli subsp. xyli str. CTCB07] Length = 97 Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 16/80 (20%), Positives = 36/80 (45%) Query: 45 DSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGE 104 + + +++R+ + + ++ ND M +V +V +++F A+ +ML VH +G Sbjct: 8 ERDTGLEARLRLGEPWVTIVWNDPVNLMSYVTYVFESYFVYPAREAERLMLLVHTEGKAG 67 Query: 105 CGVYAYEIAEMKVNQVMNYS 124 E E V + + Sbjct: 68 VATGTREEMERHVEAMHGFG 87 >gi|25028966|ref|NP_739020.1| ATP-dependent Clp protease adaptor protein ClpS [Corynebacterium efficiens YS-314] gi|23494253|dbj|BAC19220.1| conserved hypothetical protein [Corynebacterium efficiens YS-314] Length = 186 Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 15/69 (21%), Positives = 28/69 (40%), Gaps = 4/69 (5%) Query: 37 IAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLK 96 AE D +D S + + ++ +D M +V +V Q + A +M++ Sbjct: 94 TAEPDVEMDVHTVSSENLP----WLCIVWDDPVNLMSYVTYVFQTVLGYSRKRANELMMQ 149 Query: 97 VHHQGIGEC 105 VH +G Sbjct: 150 VHTEGKAVV 158 >gi|300932720|ref|ZP_07147976.1| hypothetical protein CresD4_01530 [Corynebacterium resistens DSM 45100] Length = 101 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 14/88 (15%), Positives = 31/88 (35%), Gaps = 2/88 (2%) Query: 32 MNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAK 91 M + ++ +P + + +D M +V +V Q + A Sbjct: 1 MTSPAAPSATPVQERLPETDTEANLPWMC--ICWDDPVNLMSYVTYVFQTVLGYSRKRAT 58 Query: 92 CIMLKVHHQGIGECGVYAYEIAEMKVNQ 119 +M++VH++G + E V + Sbjct: 59 ELMMQVHNEGKAVVSSGERDKVEADVKK 86 >gi|21542305|sp|Q8YZQ3|CLPS_ANASP RecName: Full=ATP-dependent Clp protease adapter protein ClpS Length = 97 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 14/58 (24%), Positives = 27/58 (46%), Gaps = 1/58 (1%) Query: 58 KLYRVLLVNDNYTPMEFVIHVLQNFF-YKDHETAKCIMLKVHHQGIGECGVYAYEIAE 114 Y+V+++ND++ + V L + + A + +VH++G V E AE Sbjct: 21 PNYKVIVLNDDFNTFQHVAECLVKYIPGMTGDLAWDLTNQVHYEGQAIVWVGPQEPAE 78 >gi|87303756|ref|ZP_01086507.1| ATP-dependent Clp protease adaptor protein ClpS [Synechococcus sp. WH 5701] gi|87281713|gb|EAQ73689.1| ATP-dependent Clp protease adaptor protein ClpS [Synechococcus sp. WH 5701] Length = 73 Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 1/54 (1%) Query: 62 VLLVNDNYTPMEFVIHVLQNFF-YKDHETAKCIMLKVHHQGIGECGVYAYEIAE 114 +LL ND ME+V+ L+ + A +ML+ H+ GIG V E AE Sbjct: 1 MLLHNDPVNSMEYVMATLRQVVPQLSEQDAMAVMLEAHNTGIGLVIVCDIEPAE 54 >gi|75909055|ref|YP_323351.1| ATP-dependent Clp protease adaptor [Anabaena variabilis ATCC 29413] gi|75702780|gb|ABA22456.1| ATP-dependent Clp protease adaptor protein ClpS [Anabaena variabilis ATCC 29413] Length = 108 Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 14/58 (24%), Positives = 27/58 (46%), Gaps = 1/58 (1%) Query: 58 KLYRVLLVNDNYTPMEFVIHVLQNFF-YKDHETAKCIMLKVHHQGIGECGVYAYEIAE 114 Y+V+++ND++ + V L + + A + +VH++G V E AE Sbjct: 32 PNYKVIVLNDDFNTFQHVAECLVKYIPGMTGDLAWDLTNQVHYEGQAIVWVGPQEPAE 89 >gi|254819164|ref|ZP_05224165.1| ATP-dependent Clp protease adaptor protein ClpS [Mycobacterium intracellulare ATCC 13950] Length = 62 Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 14/53 (26%), Positives = 24/53 (45%) Query: 72 MEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYS 124 M +V +V Q F A +ML+VH++G + E E V+++ Sbjct: 1 MTYVTYVFQKLFGYSEPHATKLMLQVHNEGKAVVSAGSRESMEADVSKLHAAG 53 >gi|19553715|ref|NP_601717.1| ATP-dependent Clp protease adaptor protein ClpS [Corynebacterium glutamicum ATCC 13032] gi|62391355|ref|YP_226757.1| ATP-dependent Clp protease adaptor protein ClpS [Corynebacterium glutamicum ATCC 13032] gi|41326696|emb|CAF21178.1| conserved hypothetical protein [Corynebacterium glutamicum ATCC 13032] Length = 124 Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 16/96 (16%), Positives = 35/96 (36%) Query: 29 DSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHE 88 +S +N + D E+ + + ++ +D M +V +V Q + Sbjct: 20 ESSLNMSSPSAPLATPDVELDVHTLSSENLPWLCIVWDDPVNLMSYVTYVFQTVLGFSKK 79 Query: 89 TAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYS 124 A +M++VH +G + E V ++ Sbjct: 80 RATELMMQVHTEGKAVVSSGEKDKVEGDVKKLHTAG 115 >gi|17227900|ref|NP_484448.1| ATP-dependent Clp protease adaptor [Nostoc sp. PCC 7120] gi|17129749|dbj|BAB72362.1| all0404 [Nostoc sp. PCC 7120] Length = 108 Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 14/58 (24%), Positives = 27/58 (46%), Gaps = 1/58 (1%) Query: 58 KLYRVLLVNDNYTPMEFVIHVLQNFF-YKDHETAKCIMLKVHHQGIGECGVYAYEIAE 114 Y+V+++ND++ + V L + + A + +VH++G V E AE Sbjct: 32 PNYKVIVLNDDFNTFQHVAECLVKYIPGMTGDLAWDLTNQVHYEGQAIVWVGPQEPAE 89 >gi|300859079|ref|YP_003784062.1| ATP-dependent Clp protease adapter protein [Corynebacterium pseudotuberculosis FRC41] gi|300686533|gb|ADK29455.1| ATP-dependent Clp protease adapter protein [Corynebacterium pseudotuberculosis FRC41] gi|302206782|gb|ADL11124.1| ATP-dependent Clp protease adaptor protein ClpS [Corynebacterium pseudotuberculosis C231] gi|302331335|gb|ADL21529.1| ATP-dependent Clp protease adaptor protein ClpS [Corynebacterium pseudotuberculosis 1002] gi|308277027|gb|ADO26926.1| ATP-dependent Clp protease adapter protein ClpS [Corynebacterium pseudotuberculosis I19] Length = 126 Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 17/89 (19%), Positives = 32/89 (35%), Gaps = 4/89 (4%) Query: 36 GIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIML 95 E D L +V S + + ++ +D M +V +V Q A +M+ Sbjct: 33 ATPELDEALSVDVASSENLP----WMCIVWDDPVNLMSYVTYVFQTILGYSKRRAIELMM 88 Query: 96 KVHHQGIGECGVYAYEIAEMKVNQVMNYS 124 +VH +G + E V ++ Sbjct: 89 QVHTEGKAVVSSGERDKVEGDVKKLHTAG 117 >gi|256390690|ref|YP_003112254.1| ATP-dependent Clp protease adaptor protein ClpS [Catenulispora acidiphila DSM 44928] gi|256356916|gb|ACU70413.1| ATP-dependent Clp protease adaptor protein ClpS [Catenulispora acidiphila DSM 44928] Length = 100 Score = 49.4 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 21/100 (21%), Positives = 40/100 (40%), Gaps = 8/100 (8%) Query: 39 EFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVH 98 E D E R + V+ P ++ ++ ND M +V +V +F A+ +M +VH Sbjct: 7 EVDPEATEETRAAP-VQDP-MWVTVVWNDPVNLMSYVTYVFMTYFGYSKGKAERMMHEVH 64 Query: 99 HQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQK 138 + G E + + H Y L ++++ Sbjct: 65 NLGKAIVSSGGRE------QMEKDVAAMHGYGLWATLQRQ 98 >gi|227504006|ref|ZP_03934055.1| ATP-dependent Clp protease adaptor protein ClpS [Corynebacterium striatum ATCC 6940] gi|227199400|gb|EEI79448.1| ATP-dependent Clp protease adaptor protein ClpS [Corynebacterium striatum ATCC 6940] Length = 142 Score = 49.4 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 17/84 (20%), Positives = 34/84 (40%), Gaps = 4/84 (4%) Query: 36 GIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIML 95 E D ++ +V S + + ++ +D M +V +V Q D + A +M+ Sbjct: 49 ATPELDEAIEVDVASSENLP----WMCIVWDDPVNLMSYVSYVFQTVLGYDKKRANELMM 104 Query: 96 KVHHQGIGECGVYAYEIAEMKVNQ 119 +VH +G + E V + Sbjct: 105 QVHTEGKAAVSTGERDKVEADVKK 128 >gi|227548652|ref|ZP_03978701.1| ATP-dependent Clp protease adaptor protein ClpS [Corynebacterium lipophiloflavum DSM 44291] gi|227079266|gb|EEI17229.1| ATP-dependent Clp protease adaptor protein ClpS [Corynebacterium lipophiloflavum DSM 44291] Length = 99 Score = 49.4 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 18/89 (20%), Positives = 35/89 (39%), Gaps = 4/89 (4%) Query: 36 GIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIML 95 E D L+ +V S + + ++ +D M +V +V Q D + A +M+ Sbjct: 6 ATPELDEQLEVDVVVSENLP----WMCIVWDDPVNLMSYVSYVFQTVLGYDRKRANELMM 61 Query: 96 KVHHQGIGECGVYAYEIAEMKVNQVMNYS 124 +VH +G + E V ++ Sbjct: 62 QVHTEGKAVVSSGEKDKVEGDVKKLHTAG 90 >gi|68535563|ref|YP_250268.1| ATP-dependent Clp protease adaptor protein ClpS [Corynebacterium jeikeium K411] gi|123651422|sp|Q4JX07|CLPS_CORJK RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|68263162|emb|CAI36650.1| conserved hypothetical protein [Corynebacterium jeikeium K411] Length = 101 Score = 49.4 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 11/60 (18%), Positives = 22/60 (36%), Gaps = 4/60 (6%) Query: 46 SEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGEC 105 E + + + +D M +V +V Q + A +M++VH +G Sbjct: 17 PETLTEPNLP----WMCICWDDPVNLMSYVTYVFQTVLGYSRKRATELMMQVHTEGKAVV 72 >gi|152967709|ref|YP_001363493.1| ATP-dependent Clp protease adaptor protein ClpS [Kineococcus radiotolerans SRS30216] gi|151362226|gb|ABS05229.1| ATP-dependent Clp protease adaptor protein ClpS [Kineococcus radiotolerans SRS30216] Length = 99 Score = 49.4 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 21/92 (22%), Positives = 36/92 (39%), Gaps = 8/92 (8%) Query: 46 SEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGEC 105 E ++ P + L+ ND M +V +V + F A +ML VH +G Sbjct: 14 PETDLTTVPDTP--WVTLVWNDPVNLMSYVAYVFRTHFGYSQAKADALMLDVHQKGRAAV 71 Query: 106 GVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 + E A + + M H Y L +++ Sbjct: 72 SAGSRE-AMERDVEAM-----HGYGLWATLQK 97 >gi|262184929|ref|ZP_06044350.1| ATP-dependent Clp protease adaptor protein ClpS [Corynebacterium aurimucosum ATCC 700975] Length = 95 Score = 49.0 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 19/87 (21%), Positives = 37/87 (42%), Gaps = 6/87 (6%) Query: 36 GIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIML 95 E D ++ +V S + + ++ +D M +V +V Q D + A +M+ Sbjct: 2 ATPELDEAIEVDVATSENLP----WMCIVWDDPVNLMSYVSYVFQTVLGYDKKRANELMM 57 Query: 96 KVHHQGIGECGVYAYE--IAEMKVNQV 120 +VH +G + A++K QV Sbjct: 58 QVHTEGKAAVSSGERDKVEADVKKLQV 84 >gi|260579690|ref|ZP_05847551.1| ATP-dependent Clp protease adapter protein ClpS [Corynebacterium jeikeium ATCC 43734] gi|258602182|gb|EEW15498.1| ATP-dependent Clp protease adapter protein ClpS [Corynebacterium jeikeium ATCC 43734] Length = 110 Score = 49.0 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 11/60 (18%), Positives = 22/60 (36%), Gaps = 4/60 (6%) Query: 46 SEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGEC 105 E + + + +D M +V +V Q + A +M++VH +G Sbjct: 26 PETLTEPNLP----WMCICWDDPVNLMSYVTYVFQTVLGYSRKRATELMMQVHTEGKAVV 81 >gi|108804875|ref|YP_644812.1| ATP-dependent Clp protease adaptor protein ClpS [Rubrobacter xylanophilus DSM 9941] gi|108766118|gb|ABG05000.1| ATP-dependent Clp protease adaptor protein ClpS [Rubrobacter xylanophilus DSM 9941] Length = 106 Score = 49.0 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 18/82 (21%), Positives = 33/82 (40%) Query: 43 CLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGI 102 + R K Y V+L++D+ E+VI +L+ F + +V G Sbjct: 4 ATRPKRRSREKSGGLPPYNVVLLDDDDHSYEYVIFMLRKLFGYPVRKGYELAREVDTTGR 63 Query: 103 GECGVYAYEIAEMKVNQVMNYS 124 E AE+K +Q+ ++ Sbjct: 64 AVVATTHLEEAELKRDQIQSFG 85 >gi|159467236|ref|XP_001691804.1| clp protease adaptor protein [Chlamydomonas reinhardtii] gi|158279150|gb|EDP04912.1| clp protease adaptor protein [Chlamydomonas reinhardtii] Length = 147 Score = 49.0 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 19/79 (24%), Positives = 30/79 (37%), Gaps = 1/79 (1%) Query: 37 IAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYK-DHETAKCIML 95 + + P +Y+VLL NDNY E+V+ VL + + A M Sbjct: 49 MDAPTTTQQPASGVERSQKRPPIYKVLLHNDNYNKREYVVKVLLKVVEQITVDDAVTCMQ 108 Query: 96 KVHHQGIGECGVYAYEIAE 114 + H G+ + AE Sbjct: 109 EAHETGVALVVACPQDNAE 127 >gi|37077250|sp|Q8FMT9|CLPS_COREF RecName: Full=ATP-dependent Clp protease adapter protein ClpS Length = 101 Score = 49.0 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 15/69 (21%), Positives = 28/69 (40%), Gaps = 4/69 (5%) Query: 37 IAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLK 96 AE D +D S + + ++ +D M +V +V Q + A +M++ Sbjct: 9 TAEPDVEMDVHTVSSENLP----WLCIVWDDPVNLMSYVTYVFQTVLGYSRKRANELMMQ 64 Query: 97 VHHQGIGEC 105 VH +G Sbjct: 65 VHTEGKAVV 73 >gi|255530138|ref|YP_003090510.1| ATP-dependent Clp protease adaptor protein ClpS [Pedobacter heparinus DSM 2366] gi|255343122|gb|ACU02448.1| ATP-dependent Clp protease adaptor protein ClpS [Pedobacter heparinus DSM 2366] Length = 93 Score = 49.0 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 13/73 (17%), Positives = 30/73 (41%), Gaps = 2/73 (2%) Query: 39 EFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVH 98 + ++ + ++R++L ND+ + VIH + + A+ I +VH Sbjct: 2 STETKEETFTLEEILTSLKTIHRLILWNDDVNTFDHVIHCMMKYLDYSEHQAEKIAWEVH 61 Query: 99 HQGIGEC--GVYA 109 ++G G + Sbjct: 62 NKGKCAVLEGSFT 74 >gi|145296512|ref|YP_001139333.1| ATP-dependent Clp protease adaptor protein ClpS [Corynebacterium glutamicum R] gi|25009631|sp|Q8NMQ1|CLPS_CORGL RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|158513595|sp|A4QGR5|CLPS_CORGB RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|21325286|dbj|BAB99908.1| Uncharacterized ACR [Corynebacterium glutamicum ATCC 13032] gi|140846432|dbj|BAF55431.1| hypothetical protein [Corynebacterium glutamicum R] Length = 100 Score = 48.6 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 17/87 (19%), Positives = 32/87 (36%), Gaps = 4/87 (4%) Query: 38 AEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKV 97 A D LD S + + ++ +D M +V +V Q + A +M++V Sbjct: 9 ATPDVELDVHTLSSENLP----WLCIVWDDPVNLMSYVTYVFQTVLGFSKKRATELMMQV 64 Query: 98 HHQGIGECGVYAYEIAEMKVNQVMNYS 124 H +G + E V ++ Sbjct: 65 HTEGKAVVSSGEKDKVEGDVKKLHTAG 91 >gi|311741206|ref|ZP_07715030.1| ATP-dependent Clp protease adapter protein ClpS [Corynebacterium pseudogenitalium ATCC 33035] gi|311303376|gb|EFQ79455.1| ATP-dependent Clp protease adapter protein ClpS [Corynebacterium pseudogenitalium ATCC 33035] Length = 108 Score = 48.6 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 21/100 (21%), Positives = 39/100 (39%), Gaps = 8/100 (8%) Query: 20 ALMSFIFMADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVL 79 A + M+ + E D LD +V S + + ++ +D M +V +V Sbjct: 3 AQFPVVRMS----SPMATPELDEELDVDVATSENLP----WMCIVWDDPVNLMSYVSYVF 54 Query: 80 QNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQ 119 Q D + A +M++VH +G + E V + Sbjct: 55 QTVLGYDKKRANELMMQVHTEGKAAVSSGERDKIEADVKK 94 >gi|227833926|ref|YP_002835633.1| hypothetical protein cauri_2102 [Corynebacterium aurimucosum ATCC 700975] gi|254763814|sp|C3PIP1|CLPS_CORA7 RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|227454942|gb|ACP33695.1| hypothetical protein cauri_2102 [Corynebacterium aurimucosum ATCC 700975] Length = 111 Score = 48.6 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 19/92 (20%), Positives = 38/92 (41%), Gaps = 6/92 (6%) Query: 31 RMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETA 90 + E D ++ +V S + + ++ +D M +V +V Q D + A Sbjct: 13 MSSPMATPELDEAIEVDVATSENLP----WMCIVWDDPVNLMSYVSYVFQTVLGYDKKRA 68 Query: 91 KCIMLKVHHQGIGECGVYAYE--IAEMKVNQV 120 +M++VH +G + A++K QV Sbjct: 69 NELMMQVHTEGKAAVSSGERDKVEADVKKLQV 100 >gi|258651917|ref|YP_003201073.1| ATP-dependent Clp protease adaptor protein ClpS [Nakamurella multipartita DSM 44233] gi|258555142|gb|ACV78084.1| ATP-dependent Clp protease adaptor protein ClpS [Nakamurella multipartita DSM 44233] Length = 103 Score = 48.6 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 16/70 (22%), Positives = 25/70 (35%) Query: 50 FSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYA 109 + + ++ ND M +V V Q A+ +ML VHH+G Sbjct: 20 TETVTTPEAPWVTIVWNDPVNLMSYVTLVFQKLLGHPRPKAEALMLDVHHKGRATVSSGP 79 Query: 110 YEIAEMKVNQ 119 E E V + Sbjct: 80 REKMEADVAK 89 >gi|116620336|ref|YP_822492.1| ATP-dependent Clp protease adaptor protein ClpS [Candidatus Solibacter usitatus Ellin6076] gi|116223498|gb|ABJ82207.1| ATP-dependent Clp protease adaptor protein ClpS [Candidatus Solibacter usitatus Ellin6076] Length = 115 Score = 48.6 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 22/88 (25%), Positives = 37/88 (42%) Query: 37 IAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLK 96 +A D+E+ + + LYRV+L++DN ++VI +LQ F + A + Sbjct: 8 MANPAIAPDTEILEREREQHVPLYRVVLLDDNDHTYDYVIEMLQKIFIFTLDQAYRHAEE 67 Query: 97 VHHQGIGECGVYAYEIAEMKVNQVMNYS 124 V G AE +Q+ Y Sbjct: 68 VDRAGRTVLITCELREAEYARDQIQAYG 95 >gi|268317544|ref|YP_003291263.1| ATP-dependent Clp protease adaptor protein ClpS [Rhodothermus marinus DSM 4252] gi|262335078|gb|ACY48875.1| ATP-dependent Clp protease adaptor protein ClpS [Rhodothermus marinus DSM 4252] Length = 104 Score = 48.6 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 27/63 (42%), Gaps = 2/63 (3%) Query: 43 CLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGI 102 +D E +++ P +RV+L ND+ + VI L A+ + KVH +G Sbjct: 18 EVDVEDTEETRLDAP--WRVILYNDDIHTFDEVIFQLMKATGCSLPEAEALTWKVHTEGK 75 Query: 103 GEC 105 Sbjct: 76 AAV 78 >gi|146301250|ref|YP_001195841.1| ATP-dependent Clp protease adaptor protein ClpS [Flavobacterium johnsoniae UW101] gi|146155668|gb|ABQ06522.1| ATP-dependent Clp protease adaptor protein ClpS [Flavobacterium johnsoniae UW101] Length = 91 Score = 48.6 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 13/65 (20%), Positives = 25/65 (38%), Gaps = 2/65 (3%) Query: 43 CLDSEVRFSSKVRVPKLY--RVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQ 100 +VR + + ++ +++ ND+ + VI L E A+ L VH+ Sbjct: 2 STKEKVREKVREKEAAVFNNEIIMYNDDVNTFDHVIDTLMRVCDHTAEQAEQCSLIVHYN 61 Query: 101 GIGEC 105 G Sbjct: 62 GKCTV 66 >gi|299471643|emb|CBN76865.1| conserved unknown protein [Ectocarpus siliculosus] Length = 225 Score = 48.3 bits (114), Expect = 4e-04, Method: Composition-based stats. Identities = 12/61 (19%), Positives = 24/61 (39%), Gaps = 1/61 (1%) Query: 46 SEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYK-DHETAKCIMLKVHHQGIGE 104 EV ++ + +RV+L ND ++V + K + A + ++ H G Sbjct: 99 VEVDNKEELDKEQWWRVILHNDEIHTFDYVTQSITKVVKKLTMKKAYEVTMETHKSGKAT 158 Query: 105 C 105 Sbjct: 159 V 159 >gi|126663986|ref|ZP_01734980.1| hypothetical protein FBBAL38_12625 [Flavobacteria bacterium BAL38] gi|126623935|gb|EAZ94629.1| hypothetical protein FBBAL38_12625 [Flavobacteria bacterium BAL38] Length = 91 Score = 47.9 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 12/51 (23%), Positives = 20/51 (39%) Query: 61 RVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYE 111 ++L ND+ + VI L D A+ L VH++G + Sbjct: 22 EIVLHNDDVNTFDHVIDTLMRVCKHDELQAEQCALLVHYKGKCTVKTGPID 72 >gi|297571673|ref|YP_003697447.1| ATP-dependent Clp protease adaptor protein ClpS [Arcanobacterium haemolyticum DSM 20595] gi|296932020|gb|ADH92828.1| ATP-dependent Clp protease adaptor protein ClpS [Arcanobacterium haemolyticum DSM 20595] Length = 100 Score = 47.9 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 18/76 (23%), Positives = 31/76 (40%), Gaps = 6/76 (7%) Query: 63 LLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMN 122 ++ +D M +V V +++F A+ ML VH +G E E V + Sbjct: 30 VVHDDPVNLMAYVQWVFESYFGMTSTVARERMLAVHRKGRAVLAAGGREAMERDVQAMHT 89 Query: 123 YSRQHQYPLQCIMEQK 138 Y L+ +EQ+ Sbjct: 90 YG------LRATIEQE 99 >gi|254412762|ref|ZP_05026535.1| ATP-dependent Clp protease adaptor protein ClpS [Microcoleus chthonoplastes PCC 7420] gi|196180497|gb|EDX75488.1| ATP-dependent Clp protease adaptor protein ClpS [Microcoleus chthonoplastes PCC 7420] Length = 108 Score = 47.9 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 15/69 (21%), Positives = 29/69 (42%), Gaps = 2/69 (2%) Query: 48 VRFSSKVRVP-KLYRVLLVNDNYTPMEFVIHVLQNFF-YKDHETAKCIMLKVHHQGIGEC 105 + R P Y+V++++D++ + V L + + A + +VH +G Sbjct: 21 EKSRQVTRKPYPNYKVIVLDDDFNTFQHVHDCLVKYIPGMSSDYAWKLTNQVHFEGQAIV 80 Query: 106 GVYAYEIAE 114 V E AE Sbjct: 81 WVGPQEQAE 89 >gi|300780576|ref|ZP_07090431.1| ATP-dependent Clp protease adapter protein ClpS [Corynebacterium genitalium ATCC 33030] gi|300533562|gb|EFK54622.1| ATP-dependent Clp protease adapter protein ClpS [Corynebacterium genitalium ATCC 33030] Length = 112 Score = 47.9 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 18/106 (16%), Positives = 39/106 (36%), Gaps = 3/106 (2%) Query: 19 LALMSFIFMADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHV 78 + ++ RM +A D EV + +P + ++ +D +V +V Sbjct: 1 MTGVNPEIRPGVRMGSP-MATPDLDEQIEVNVDTAENLPWMC--IVWDDPVNLQSYVTYV 57 Query: 79 LQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYS 124 Q + A+ +M++VH +G + E V ++ Sbjct: 58 FQTVLGYGRKRAQELMMQVHTEGKAVVSSGEKDKVEGDVKKLHTAG 103 >gi|312129998|ref|YP_003997338.1| ATP-dependent clp protease adaptor protein clps [Leadbetterella byssophila DSM 17132] gi|311906544|gb|ADQ16985.1| ATP-dependent Clp protease adaptor protein ClpS [Leadbetterella byssophila DSM 17132] Length = 95 Score = 47.9 bits (113), Expect = 5e-04, Method: Composition-based stats. Identities = 13/48 (27%), Positives = 23/48 (47%) Query: 58 KLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGEC 105 KLY +++ ND+ + VI L + +E A+ L +H +G Sbjct: 21 KLYSLVVFNDDVNTFDHVIETLVEYCDHTYEQAEQCTLIIHFKGKCAV 68 >gi|296118689|ref|ZP_06837265.1| ATP-dependent Clp protease adaptor protein ClpS [Corynebacterium ammoniagenes DSM 20306] gi|295968178|gb|EFG81427.1| ATP-dependent Clp protease adaptor protein ClpS [Corynebacterium ammoniagenes DSM 20306] Length = 95 Score = 47.5 bits (112), Expect = 6e-04, Method: Composition-based stats. Identities = 18/87 (20%), Positives = 35/87 (40%), Gaps = 6/87 (6%) Query: 36 GIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIML 95 + D +D V + + ++ +D M +V +V Q D + A +M+ Sbjct: 2 ASPKLDEAVDVSVASEENLP----WMCIVWDDPVNLMSYVSYVFQTVLGYDKKRANELMM 57 Query: 96 KVHHQGIGECGVYAYE--IAEMKVNQV 120 +VH +G + A++K QV Sbjct: 58 QVHTEGKAAVTSGERDKVEADVKKLQV 84 >gi|255036663|ref|YP_003087284.1| ATP-dependent Clp protease adaptor protein ClpS [Dyadobacter fermentans DSM 18053] gi|254949419|gb|ACT94119.1| ATP-dependent Clp protease adaptor protein ClpS [Dyadobacter fermentans DSM 18053] Length = 91 Score = 46.7 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 11/62 (17%), Positives = 27/62 (43%) Query: 44 LDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIG 103 D+E+ + + ++++ ND+ ++VI L E A+ + +H++G Sbjct: 5 TDTELEILEETVATDIKKLVIYNDDVNTFDWVIDTLVEVCGHTSEQAEQCTIIIHYKGKC 64 Query: 104 EC 105 Sbjct: 65 SV 66 >gi|227502992|ref|ZP_03933041.1| ATP-dependent Clp protease adaptor protein ClpS [Corynebacterium accolens ATCC 49725] gi|306836777|ref|ZP_07469737.1| ATP-dependent Clp protease adapter protein ClpS [Corynebacterium accolens ATCC 49726] gi|227076053|gb|EEI14016.1| ATP-dependent Clp protease adaptor protein ClpS [Corynebacterium accolens ATCC 49725] gi|304567323|gb|EFM42928.1| ATP-dependent Clp protease adapter protein ClpS [Corynebacterium accolens ATCC 49726] Length = 108 Score = 46.7 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 14/76 (18%), Positives = 31/76 (40%), Gaps = 4/76 (5%) Query: 30 SRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHET 89 + + D ++ +V S + + ++ +D M +V +V Q D + Sbjct: 9 RMSSPMATPDLDEGIEVDVAASENLP----WMCIVWDDPVNLMSYVSYVFQTVLGYDKKR 64 Query: 90 AKCIMLKVHHQGIGEC 105 A +M++VH +G Sbjct: 65 ANELMMQVHTEGKAAV 80 >gi|319441876|ref|ZP_07991032.1| ATP-dependent Clp protease adaptor protein ClpS [Corynebacterium variabile DSM 44702] Length = 101 Score = 46.7 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 12/54 (22%), Positives = 22/54 (40%) Query: 66 NDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKVNQ 119 +D M +V +V Q + A +M++VH +G + E V + Sbjct: 33 DDPVNLMSYVTYVFQTVLGYSRKRATALMMEVHTEGKAIVSSGDRDKVEADVKK 86 >gi|259508030|ref|ZP_05750930.1| ATP-dependent Clp protease adaptor protein ClpS [Corynebacterium efficiens YS-314] gi|259164371|gb|EEW48925.1| ATP-dependent Clp protease adaptor protein ClpS [Corynebacterium efficiens YS-314] Length = 86 Score = 46.7 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 10/43 (23%), Positives = 20/43 (46%) Query: 63 LLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGEC 105 ++ +D M +V +V Q + A +M++VH +G Sbjct: 16 IVWDDPVNLMSYVTYVFQTVLGYSRKRANELMMQVHTEGKAVV 58 >gi|297737852|emb|CBI27053.3| unnamed protein product [Vitis vinifera] Length = 127 Score = 46.7 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 30/67 (44%) Query: 15 RDGILALMSFIFMADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEF 74 R ++A+ + + + I + +SE ++ YRV+L NDNY E+ Sbjct: 35 RSFLMAISASGPGKGGLLERPVIEKVTPGRESEFDLRKSRKIAPPYRVILHNDNYNKREY 94 Query: 75 VIHVLQN 81 V+ VL Sbjct: 95 VVQVLMK 101 >gi|225021570|ref|ZP_03710762.1| hypothetical protein CORMATOL_01591 [Corynebacterium matruchotii ATCC 33806] gi|305681385|ref|ZP_07404192.1| ATP-dependent Clp protease adaptor protein ClpS [Corynebacterium matruchotii ATCC 14266] gi|224945561|gb|EEG26770.1| hypothetical protein CORMATOL_01591 [Corynebacterium matruchotii ATCC 33806] gi|305659590|gb|EFM49090.1| ATP-dependent Clp protease adaptor protein ClpS [Corynebacterium matruchotii ATCC 14266] Length = 133 Score = 46.3 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 20/101 (19%), Positives = 41/101 (40%), Gaps = 8/101 (7%) Query: 37 IAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLK 96 +A + EV ++ +P + ++ +D M +V +V Q D + A +M++ Sbjct: 39 MATPGVEQELEVDMATSENLP--WVCIVWDDPVNLMSYVTYVFQTVLGYDKKRAMELMMQ 96 Query: 97 VHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 VH +G + E V ++ + L M+Q Sbjct: 97 VHTEGKAAVSSGEKDKVEADVKKLHT------HGLWATMQQ 131 >gi|120434799|ref|YP_860485.1| ATP-dependent Clp protease adaptor protein [Gramella forsetii KT0803] gi|117576949|emb|CAL65418.1| ATP-dependent Clp protease adaptor protein [Gramella forsetii KT0803] Length = 91 Score = 46.3 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 15/69 (21%), Positives = 25/69 (36%) Query: 42 NCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQG 101 + K + K ++L ND+Y + VI L E A+ + VH++G Sbjct: 3 TKEEVLEEVEIKTKDKKENEIVLYNDDYNTFDHVIDTLIYACEHTPEQAEQCSILVHYKG 62 Query: 102 IGECGVYAY 110 Y Sbjct: 63 KCTVKTGPY 71 >gi|256818857|ref|YP_003140136.1| ATP-dependent Clp protease adaptor protein ClpS [Capnocytophaga ochracea DSM 7271] gi|256580440|gb|ACU91575.1| ATP-dependent Clp protease adaptor protein ClpS [Capnocytophaga ochracea DSM 7271] Length = 96 Score = 46.3 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 13/51 (25%), Positives = 24/51 (47%), Gaps = 2/51 (3%) Query: 62 VLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGEC--GVYAY 110 ++L ND+ + VI L + E A+ + VH +G + G Y++ Sbjct: 26 LILYNDDVNTFDHVIDTLVKVCHHTFEQAEQCAIIVHFKGKCDVKSGSYSF 76 >gi|88803812|ref|ZP_01119335.1| hypothetical protein PI23P_06261 [Polaribacter irgensii 23-P] gi|88780340|gb|EAR11522.1| hypothetical protein PI23P_06261 [Polaribacter irgensii 23-P] Length = 91 Score = 46.3 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 11/46 (23%), Positives = 22/46 (47%) Query: 60 YRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGEC 105 + ++L ND+ + VI+ L + E A+ + VH++G Sbjct: 21 HEIVLHNDDVNTFDHVINSLMDVCEHTLEQAEQCAMLVHYKGKCSV 66 >gi|225013083|ref|ZP_03703498.1| ATP-dependent Clp protease adaptor protein ClpS [Flavobacteria bacterium MS024-2A] gi|225002811|gb|EEG40792.1| ATP-dependent Clp protease adaptor protein ClpS [Flavobacteria bacterium MS024-2A] Length = 94 Score = 46.3 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 13/69 (18%), Positives = 23/69 (33%) Query: 37 IAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLK 96 ++E E + + ++L ND+ E VI L + A+ Sbjct: 1 MSEAQPFNKPEEEVEVSTLTDREHEIILYNDDVNTFEHVIECLVAICDHNALQAEQCAYL 60 Query: 97 VHHQGIGEC 105 VH+ G Sbjct: 61 VHYSGKCAV 69 >gi|254421403|ref|ZP_05035121.1| ATP-dependent Clp protease adaptor protein ClpS [Synechococcus sp. PCC 7335] gi|196188892|gb|EDX83856.1| ATP-dependent Clp protease adaptor protein ClpS [Synechococcus sp. PCC 7335] Length = 71 Score = 46.3 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 11/52 (21%), Positives = 24/52 (46%), Gaps = 1/52 (1%) Query: 64 LVNDNYTPMEFVIHVLQNFF-YKDHETAKCIMLKVHHQGIGECGVYAYEIAE 114 ++ND++ E V+ L + + + A + ++H++G E AE Sbjct: 1 MLNDDFNTFEHVVKTLTTYIPGMNSDQAWELADQIHNEGQAIVWTGPLEQAE 52 >gi|315224229|ref|ZP_07866069.1| ATP-dependent Clp protease adaptor protein ClpS [Capnocytophaga ochracea F0287] gi|314945962|gb|EFS97971.1| ATP-dependent Clp protease adaptor protein ClpS [Capnocytophaga ochracea F0287] Length = 96 Score = 46.0 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 13/51 (25%), Positives = 24/51 (47%), Gaps = 2/51 (3%) Query: 62 VLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGEC--GVYAY 110 ++L ND+ + VI L + E A+ + VH +G + G Y++ Sbjct: 26 LILYNDDVNTFDHVIDTLVKVCHHTFEQAEQCAIIVHFKGKCDVKSGSYSF 76 >gi|213962229|ref|ZP_03390493.1| ATP-dependent Clp protease adaptor protein ClpS [Capnocytophaga sputigena Capno] gi|213955235|gb|EEB66553.1| ATP-dependent Clp protease adaptor protein ClpS [Capnocytophaga sputigena Capno] Length = 95 Score = 46.0 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 13/50 (26%), Positives = 23/50 (46%) Query: 62 VLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYE 111 ++L ND+ + VI L + E A+ + VH +G + +YE Sbjct: 26 LILYNDDVNTFDHVIDTLVEVCHHTFEQAEQCAIIVHFKGKCDVKTGSYE 75 >gi|16330271|ref|NP_440999.1| ATP-dependent Clp protease adaptor [Synechocystis sp. PCC 6803] gi|12230854|sp|P73634|CLPS_SYNY3 RecName: Full=ATP-dependent Clp protease adapter protein ClpS gi|1652760|dbj|BAA17679.1| ssl3379 [Synechocystis sp. PCC 6803] Length = 98 Score = 46.0 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 14/85 (16%), Positives = 32/85 (37%), Gaps = 7/85 (8%) Query: 31 RMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFF-YKDHET 89 ++ + D + + ++V+++ND++ + V L + + Sbjct: 1 MISNAATSTPDRLTSTVRKTYPN------FKVIVLNDDFNTFQHVSDCLLKYIPGMTGDR 54 Query: 90 AKCIMLKVHHQGIGECGVYAYEIAE 114 A + +VH G+ V E AE Sbjct: 55 AWELTNQVHFDGLAIVWVGPQEQAE 79 >gi|313677040|ref|YP_004055036.1| ATP-dependent clp protease adaptor protein clps [Marivirga tractuosa DSM 4126] gi|312943738|gb|ADR22928.1| ATP-dependent Clp protease adaptor protein ClpS [Marivirga tractuosa DSM 4126] Length = 98 Score = 46.0 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 11/44 (25%), Positives = 20/44 (45%) Query: 62 VLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGEC 105 +++ ND+ + VI+ L E A+ L VH++G Sbjct: 30 LIVYNDDVNTFDHVINTLIKVCKHSPEQAEQCTLLVHYKGKCAV 73 >gi|295132850|ref|YP_003583526.1| ATP-dependent Clp protease adaptor protein [Zunongwangia profunda SM-A87] gi|294980865|gb|ADF51330.1| ATP-dependent Clp protease adaptor protein [Zunongwangia profunda SM-A87] Length = 89 Score = 46.0 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 26/63 (41%) Query: 43 CLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGI 102 EV + +V K ++L ND+Y + VI L E A+ + VH++G Sbjct: 2 STQEEVLEKVETKVDKENEIVLYNDDYNTFDHVIETLIYACDHTPEQAEQCSILVHYKGK 61 Query: 103 GEC 105 Sbjct: 62 CTV 64 >gi|312891251|ref|ZP_07750770.1| ATP-dependent Clp protease adaptor protein ClpS [Mucilaginibacter paludis DSM 18603] gi|311296211|gb|EFQ73361.1| ATP-dependent Clp protease adaptor protein ClpS [Mucilaginibacter paludis DSM 18603] Length = 100 Score = 45.6 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 13/53 (24%), Positives = 25/53 (47%), Gaps = 2/53 (3%) Query: 59 LYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGEC--GVYA 109 L+R++L ND+ + VI+ + + + I KVH++G G + Sbjct: 29 LHRLILWNDDVNSFDHVIYCMMKYLDYTESQGEKIAWKVHNEGKCAVLEGSFT 81 >gi|86606056|ref|YP_474819.1| ATP-dependent Clp protease adaptor [Synechococcus sp. JA-3-3Ab] gi|86554598|gb|ABC99556.1| ATP-dependent Clp protease adaptor protein ClpS [Synechococcus sp. JA-3-3Ab] Length = 101 Score = 45.6 bits (107), Expect = 0.003, Method: Composition-based stats. Identities = 14/66 (21%), Positives = 31/66 (46%), Gaps = 2/66 (3%) Query: 51 SSKVRVP-KLYRVLLVNDNYTPMEFVIHVLQNFF-YKDHETAKCIMLKVHHQGIGECGVY 108 ++VR P ++V++++D++ + V L + A+ + ++V +G V Sbjct: 17 RTRVRQPYPHFKVIVLDDDFNTFQHVTECLLKYIPGMTLPLARQLTVQVDAEGQAVVWVG 76 Query: 109 AYEIAE 114 E AE Sbjct: 77 PQEQAE 82 >gi|193215164|ref|YP_001996363.1| ATP-dependent Clp protease adaptor protein ClpS [Chloroherpeton thalassium ATCC 35110] gi|193088641|gb|ACF13916.1| ATP-dependent Clp protease adaptor protein ClpS [Chloroherpeton thalassium ATCC 35110] Length = 103 Score = 45.2 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 3/65 (4%) Query: 59 LYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYE-IAEMKV 117 Y+V+L ND+Y E VI+ L A+ +VH++G VY + +A +KV Sbjct: 29 PYKVVLFNDDYHTFEEVIYQLMKATGCSRGKAEHHTWEVHNRGRSI--VYDGDLMACVKV 86 Query: 118 NQVMN 122 + V+ Sbjct: 87 SAVLE 91 >gi|299115926|emb|CBN75933.1| conserved unknown protein [Ectocarpus siliculosus] Length = 212 Score = 45.2 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 19/72 (26%), Positives = 32/72 (44%), Gaps = 1/72 (1%) Query: 52 SKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFF-YKDHETAKCIMLKVHHQGIGECGVYAY 110 ++ +++VL++ D E V+ +Q+ D+ A I + G G CG Y Sbjct: 117 TETEDAPMFQVLVIGDEEYNREHVVMSIQDIVPDTDNTRAAEIFEEAQEGGKGFCGTYPE 176 Query: 111 EIAEMKVNQVMN 122 E AE+ V Q Sbjct: 177 EEAELYVEQFTR 188 >gi|260062041|ref|YP_003195121.1| hypothetical protein RB2501_10627 [Robiginitalea biformata HTCC2501] gi|88783603|gb|EAR14774.1| hypothetical protein RB2501_10627 [Robiginitalea biformata HTCC2501] Length = 114 Score = 45.2 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 15/67 (22%), Positives = 26/67 (38%), Gaps = 4/67 (5%) Query: 43 CLDSEVRFSSKV----RVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVH 98 + ++ R ++ + L ++L ND + VI L + E A+ L VH Sbjct: 23 DMSTKERLQEELLVEDKQKHLSEIVLFNDEVNTFDHVIQTLIDVCEHTPEQAEQCSLIVH 82 Query: 99 HQGIGEC 105 H G Sbjct: 83 HNGKCTV 89 >gi|86610000|ref|YP_478762.1| ATP-dependent Clp protease adaptor [Synechococcus sp. JA-2-3B'a(2-13)] gi|86558542|gb|ABD03499.1| ATP-dependent Clp protease adaptor protein clpS [Synechococcus sp. JA-2-3B'a(2-13)] Length = 101 Score = 45.2 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 14/66 (21%), Positives = 31/66 (46%), Gaps = 2/66 (3%) Query: 51 SSKVRVP-KLYRVLLVNDNYTPMEFVIHVLQNFF-YKDHETAKCIMLKVHHQGIGECGVY 108 ++VR P ++V++++D++ + V L + A+ + ++V +G V Sbjct: 17 RTQVRQPYPHFKVIVLDDDFNTFQHVTECLLKYIPGMTLPLARQLTVQVDAEGQAVVWVG 76 Query: 109 AYEIAE 114 E AE Sbjct: 77 PQEQAE 82 >gi|225850997|ref|YP_002731231.1| ATP-dependent Clp protease adaptor protein ClpS [Persephonella marina EX-H1] gi|225645917|gb|ACO04103.1| ATP-dependent Clp protease adaptor protein ClpS [Persephonella marina EX-H1] Length = 90 Score = 44.8 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 29/63 (46%) Query: 43 CLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGI 102 + EV V+ +V++ ND++ E VI+ + D ETA+ + ++H +G Sbjct: 2 GIGFEVEVEKDVQTYIPAKVVVYNDDWHTFEEVIYQIMKAIKCDLETAQNLTWEIHTKGK 61 Query: 103 GEC 105 Sbjct: 62 AVV 64 >gi|227536203|ref|ZP_03966252.1| conserved hypothetical protein [Sphingobacterium spiritivorum ATCC 33300] gi|227244100|gb|EEI94115.1| conserved hypothetical protein [Sphingobacterium spiritivorum ATCC 33300] Length = 93 Score = 44.4 bits (104), Expect = 0.006, Method: Composition-based stats. Identities = 13/43 (30%), Positives = 19/43 (44%) Query: 61 RVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIG 103 R++L ND + VI L + A+ I KVH +G Sbjct: 24 RLILWNDETNTFDHVIECLMKHLQYTEKQAEQIAWKVHTEGKC 66 >gi|332042562|gb|EGI78763.1| ATP-dependent Clp protease adaptor protein ClpS [Lacinutrix algicola 5H-3-7-4] Length = 91 Score = 44.0 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 12/64 (18%), Positives = 25/64 (39%) Query: 42 NCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQG 101 +F + + K +++ ND+ + VI+ L E A+ + VH++G Sbjct: 3 TKEKVLEQFDTATKEKKNNEIVVYNDDVNTFDHVINTLIKACDHTPEQAEQCTILVHYKG 62 Query: 102 IGEC 105 Sbjct: 63 QCTV 66 >gi|300772163|ref|ZP_07082033.1| ATP-dependent Clp protease adaptor protein ClpS [Sphingobacterium spiritivorum ATCC 33861] gi|300760466|gb|EFK57292.1| ATP-dependent Clp protease adaptor protein ClpS [Sphingobacterium spiritivorum ATCC 33861] Length = 101 Score = 44.0 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 13/43 (30%), Positives = 19/43 (44%) Query: 61 RVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIG 103 R++L ND + VI L + A+ I KVH +G Sbjct: 32 RLILWNDETNTFDHVIECLMKHLQYTEKQAEQIAWKVHTEGKC 74 >gi|124003951|ref|ZP_01688798.1| ATP-dependent Clp protease adaptor protein ClpS [Microscilla marina ATCC 23134] gi|123990530|gb|EAY30010.1| ATP-dependent Clp protease adaptor protein ClpS [Microscilla marina ATCC 23134] Length = 90 Score = 44.0 bits (103), Expect = 0.007, Method: Composition-based stats. Identities = 10/47 (21%), Positives = 20/47 (42%) Query: 61 RVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGV 107 ++ + ND+ + VI+ L E A+ +H++G V Sbjct: 21 QLTVFNDDINTFDHVINTLIEVCNHTPEQAEQCTWIIHYKGKCSVKV 67 >gi|145326694|ref|NP_001077794.1| unknown protein [Arabidopsis thaliana] gi|332196704|gb|AEE34825.1| ATP-dependent Clp protease adaptor protein ClpS [Arabidopsis thaliana] Length = 129 Score = 43.6 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 2/44 (4%) Query: 38 AEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQN 81 + ++R S K+ P YRV+L NDN+ E+V+ VL Sbjct: 62 TTPGRESEFDLRKSKKIAPP--YRVILHNDNFNKREYVVQVLMK 103 >gi|311745662|ref|ZP_07719447.1| ATP-dependent Clp protease adaptor protein ClpS [Algoriphagus sp. PR1] gi|126575100|gb|EAZ79450.1| ATP-dependent Clp protease adaptor protein ClpS [Algoriphagus sp. PR1] Length = 92 Score = 43.6 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 9/44 (20%), Positives = 18/44 (40%) Query: 62 VLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGEC 105 +++ ND+ + V +L E A+ L +H +G Sbjct: 24 LIVYNDDVNTFDHVSTILIKVCKHSPEQAEQCTLIIHFKGKCAV 67 >gi|119489795|ref|ZP_01622553.1| ATP-dependent Clp protease adaptor protein ClpS [Lyngbya sp. PCC 8106] gi|119454369|gb|EAW35519.1| ATP-dependent Clp protease adaptor protein ClpS [Lyngbya sp. PCC 8106] Length = 63 Score = 43.6 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 15/44 (34%), Positives = 20/44 (45%), Gaps = 1/44 (2%) Query: 72 MEFVIHVL-QNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAE 114 ME+V+ VL Q A IM++ H G+ A E AE Sbjct: 1 MEYVVQVLLQTVPSLTQPQAVSIMMEAHTNGLALVITCAQEHAE 44 >gi|284036516|ref|YP_003386446.1| ATP-dependent Clp protease adaptor protein ClpS [Spirosoma linguale DSM 74] gi|283815809|gb|ADB37647.1| ATP-dependent Clp protease adaptor protein ClpS [Spirosoma linguale DSM 74] Length = 92 Score = 43.6 bits (102), Expect = 0.009, Method: Composition-based stats. Identities = 12/61 (19%), Positives = 26/61 (42%) Query: 45 DSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGE 104 ++ V +V ++ +++ ND + VI L + E A+ L +H++G Sbjct: 6 ETVVDVLDQVVETDVHNLVVFNDEVNTFDHVIETLIDVCGHTPEQAEQCTLLIHYKGKCS 65 Query: 105 C 105 Sbjct: 66 V 66 >gi|124023254|ref|YP_001017561.1| ATP-dependent Clp protease adaptor [Prochlorococcus marinus str. MIT 9303] gi|123963540|gb|ABM78296.1| Uncharacterized conserved protein [Prochlorococcus marinus str. MIT 9303] Length = 98 Score = 43.3 bits (101), Expect = 0.011, Method: Composition-based stats. Identities = 14/68 (20%), Positives = 28/68 (41%), Gaps = 1/68 (1%) Query: 48 VRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFF-YKDHETAKCIMLKVHHQGIGECG 106 + + + + RV+++ND+ + V+ L+ E A + ++ QG E Sbjct: 12 LERAKQTQRYPQARVIVLNDDVNTFQHVVDCLRRIIPGMSEERAWNLAHQIDGQGSAEVW 71 Query: 107 VYAYEIAE 114 E AE Sbjct: 72 CGPLEQAE 79 >gi|33862944|ref|NP_894504.1| ATP-dependent Clp protease adaptor [Prochlorococcus marinus str. MIT 9313] gi|33634861|emb|CAE20847.1| conserved hypothetical protein [Prochlorococcus marinus str. MIT 9313] Length = 98 Score = 43.3 bits (101), Expect = 0.011, Method: Composition-based stats. Identities = 14/68 (20%), Positives = 28/68 (41%), Gaps = 1/68 (1%) Query: 48 VRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFF-YKDHETAKCIMLKVHHQGIGECG 106 + + + + RV+++ND+ + V+ L+ E A + ++ QG E Sbjct: 12 LERAKQTQRYPQARVIVLNDDVNTFQHVVDCLRRIIPGMSEERAWNLAHQIDGQGSAEVW 71 Query: 107 VYAYEIAE 114 E AE Sbjct: 72 CGPLEQAE 79 >gi|223996201|ref|XP_002287774.1| predicted protein [Thalassiosira pseudonana CCMP1335] gi|220976890|gb|EED95217.1| predicted protein [Thalassiosira pseudonana CCMP1335] Length = 194 Score = 43.3 bits (101), Expect = 0.011, Method: Composition-based stats. Identities = 23/114 (20%), Positives = 40/114 (35%), Gaps = 14/114 (12%) Query: 13 VKRDGILALMSFIFMADSRMNKKGIAEFDNC------------LDSEVRFSSKVRVPKLY 60 +R + + + + M+DS G E D +++ + +++ Sbjct: 49 AQRTSV-SSTTILHMSDSGGGGGGAMERDTSKKRGLTTITIDKEETDTQMEEDDTPEEVW 107 Query: 61 RVLLVNDNYTPMEFVIHVLQNFFY-KDHETAKCIMLKVHHQGIGECGVYAYEIA 113 RV+L ND +VI LQ D + A I + H G E A Sbjct: 108 RVILHNDEVHTFNYVIRSLQKVIGTLDKKKAHDICVVTHGTGQATVTQCWKEQA 161 >gi|256425533|ref|YP_003126186.1| ATP-dependent Clp protease adaptor protein ClpS [Chitinophaga pinensis DSM 2588] gi|256040441|gb|ACU63985.1| ATP-dependent Clp protease adaptor protein ClpS [Chitinophaga pinensis DSM 2588] Length = 102 Score = 43.3 bits (101), Expect = 0.012, Method: Composition-based stats. Identities = 17/86 (19%), Positives = 31/86 (36%), Gaps = 9/86 (10%) Query: 27 MADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKD 86 M+ I E+++ L +E + +++ ND ++VI L Sbjct: 1 MSQRNQTGTKIQEWEDVLVAEDEQFP-------FSLIVWNDEVNTFDWVIQSLIEVCDHT 53 Query: 87 HETAKCIMLKVHHQGIGEC--GVYAY 110 E A+ L +HH G G + Sbjct: 54 QEQAEQCALIIHHNGKYAVKQGEFTR 79 >gi|226330748|ref|ZP_03806266.1| hypothetical protein PROPEN_04668 [Proteus penneri ATCC 35198] gi|225201543|gb|EEG83897.1| hypothetical protein PROPEN_04668 [Proteus penneri ATCC 35198] Length = 42 Score = 43.3 bits (101), Expect = 0.012, Method: Composition-based stats. Identities = 12/36 (33%), Positives = 17/36 (47%) Query: 36 GIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTP 71 G +F K P +Y+V+L ND+YTP Sbjct: 2 GQFDFLTETTLGEDVHQKNEPPSMYKVILNNDDYTP 37 >gi|86132928|ref|ZP_01051519.1| ATP-dependent Clp protease adaptor protein ClpS [Dokdonia donghaensis MED134] gi|85816634|gb|EAQ37821.1| ATP-dependent Clp protease adaptor protein ClpS [Dokdonia donghaensis MED134] Length = 91 Score = 42.9 bits (100), Expect = 0.013, Method: Composition-based stats. Identities = 11/52 (21%), Positives = 20/52 (38%) Query: 54 VRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGEC 105 + ++L ND+ + VI+ L + A L VH++G Sbjct: 15 TEESPAHEIILYNDDVNTFDHVINTLIYACDHEENQAHQCALLVHYKGKCSV 66 >gi|86141235|ref|ZP_01059781.1| hypothetical protein MED217_04437 [Leeuwenhoekiella blandensis MED217] gi|85831794|gb|EAQ50249.1| hypothetical protein MED217_04437 [Leeuwenhoekiella blandensis MED217] Length = 91 Score = 42.9 bits (100), Expect = 0.014, Method: Composition-based stats. Identities = 12/51 (23%), Positives = 21/51 (41%) Query: 61 RVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYE 111 +++ ND+ + VI L A+ L VH++G +YE Sbjct: 22 EIVVYNDDVNTFDHVIDTLIEVCDHTPIQAEQCSLIVHYKGKCTVKTGSYE 72 >gi|148239546|ref|YP_001224933.1| ATP-dependent Clp protease adaptor [Synechococcus sp. WH 7803] gi|147848085|emb|CAK23636.1| ATP-dependent Clp protease adaptor protein ClpS [Synechococcus sp. WH 7803] Length = 98 Score = 42.9 bits (100), Expect = 0.014, Method: Composition-based stats. Identities = 14/79 (17%), Positives = 31/79 (39%), Gaps = 1/79 (1%) Query: 37 IAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFF-YKDHETAKCIML 95 + + + + + + RV+++ND++ E V+ L + E A + Sbjct: 1 MTSSSPGVSTVLERDRQAQRYPQARVIVLNDDFNTFEHVVESLCRIIPGMNTEKAWSLAH 60 Query: 96 KVHHQGIGECGVYAYEIAE 114 ++ +G E E AE Sbjct: 61 RIDGEGAAEVWCGPLEQAE 79 >gi|219111873|ref|XP_002177688.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217410573|gb|EEC50502.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 167 Score = 42.9 bits (100), Expect = 0.015, Method: Composition-based stats. Identities = 16/71 (22%), Positives = 29/71 (40%), Gaps = 1/71 (1%) Query: 45 DSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFF-YKDHETAKCIMLKVHHQGIG 103 D + + +Y+++L+ D+ E VI + D + A + + G Sbjct: 75 DPVQKRDEDFQDAPMYKLMLLADDGYDGEHVITRMCAILEDMDEDAAATVFKQAQQSGKA 134 Query: 104 ECGVYAYEIAE 114 CG Y +E AE Sbjct: 135 MCGKYPFERAE 145 >gi|91214803|ref|ZP_01251776.1| ribosomal protein L11 methyltransferase [Psychroflexus torquis ATCC 700755] gi|91187230|gb|EAS73600.1| ribosomal protein L11 methyltransferase [Psychroflexus torquis ATCC 700755] Length = 91 Score = 42.9 bits (100), Expect = 0.015, Method: Composition-based stats. Identities = 11/46 (23%), Positives = 19/46 (41%) Query: 60 YRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGEC 105 Y +++ ND + VI L D A+ L +H++G Sbjct: 21 YEIIVYNDEVNTFDHVIETLIKTCDHDSIQAEQCTLLIHYKGKCAV 66 >gi|319952046|ref|YP_004163313.1| ATP-dependent clp protease adaptor protein clps [Cellulophaga algicola DSM 14237] gi|319420706|gb|ADV47815.1| ATP-dependent Clp protease adaptor protein ClpS [Cellulophaga algicola DSM 14237] Length = 91 Score = 42.9 bits (100), Expect = 0.016, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 19/51 (37%) Query: 61 RVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYE 111 ++L ND + VI L E A+ + VHH G YE Sbjct: 22 EIVLFNDEVNTFDHVIETLIGVCDHTPEQAEQCSIIVHHNGKCTVKTGDYE 72 >gi|163787701|ref|ZP_02182148.1| hypothetical protein FBALC1_04142 [Flavobacteriales bacterium ALC-1] gi|159877589|gb|EDP71646.1| hypothetical protein FBALC1_04142 [Flavobacteriales bacterium ALC-1] Length = 91 Score = 42.5 bits (99), Expect = 0.017, Method: Composition-based stats. Identities = 12/51 (23%), Positives = 22/51 (43%) Query: 61 RVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYE 111 ++L ND+ + VI L E A+ + VH++G +Y+ Sbjct: 22 EIVLFNDDVNTFDHVIDTLIYACEHTPEQAEQCSIIVHYKGKCTVKTGSYD 72 >gi|126697028|ref|YP_001091914.1| hypothetical protein P9301_16901 [Prochlorococcus marinus str. MIT 9301] gi|126544071|gb|ABO18313.1| Hypothetical protein P9301_16901 [Prochlorococcus marinus str. MIT 9301] Length = 63 Score = 42.5 bits (99), Expect = 0.017, Method: Composition-based stats. Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 1/44 (2%) Query: 72 MEFVIHVLQNFF-YKDHETAKCIMLKVHHQGIGECGVYAYEIAE 114 ME+V L+ + A IML+ H+ G+G V E AE Sbjct: 1 MEYVTISLREVVPQLSEQDAIAIMLEAHNTGVGLVIVCDLEPAE 44 >gi|37522100|ref|NP_925477.1| hypothetical protein gll2531 [Gloeobacter violaceus PCC 7421] gi|35213099|dbj|BAC90472.1| gll2531 [Gloeobacter violaceus PCC 7421] Length = 194 Score = 42.5 bits (99), Expect = 0.017, Method: Composition-based stats. Identities = 16/71 (22%), Positives = 27/71 (38%), Gaps = 8/71 (11%) Query: 50 FSSKVRVPKLYR---VLLVNDNYTPMEFVIHVL-QNFFYKDHETAKCIMLKVHHQGIGEC 105 + + P +R V L ND E V+ L ++ + A + + H +G Sbjct: 108 VKTPEKTPLRWRDWVVRLFNDPVNKFEHVVESLCKHVPGMSQDMAWSVAWQAHREG--VA 165 Query: 106 GVY--AYEIAE 114 Y E+AE Sbjct: 166 ATYQGPREVAE 176 >gi|56751052|ref|YP_171753.1| ATP-dependent Clp protease adaptor [Synechococcus elongatus PCC 6301] gi|56686011|dbj|BAD79233.1| hypothetical protein [Synechococcus elongatus PCC 6301] Length = 136 Score = 42.5 bits (99), Expect = 0.017, Method: Composition-based stats. Identities = 15/64 (23%), Positives = 29/64 (45%), Gaps = 2/64 (3%) Query: 53 KVRVP-KLYRVLLVNDNYTPMEFVIHVLQNFF-YKDHETAKCIMLKVHHQGIGECGVYAY 110 +VR P +RV++++D+ + V L + + A + +VH++G Sbjct: 54 RVRQPYPHFRVIVLDDDVNTFQHVAECLLKYIPGMTGDRAWDLTNQVHYEGAATVWSGPQ 113 Query: 111 EIAE 114 E AE Sbjct: 114 EQAE 117 >gi|183221780|ref|YP_001839776.1| putative ATP-dependent Clp protease adaptor protein C [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189911854|ref|YP_001963409.1| ATP-dependent Clp protease adaptor protein [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167776530|gb|ABZ94831.1| ATP-dependent Clp protease adaptor protein [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167780202|gb|ABZ98500.1| Putative ATP-dependent Clp protease adaptor protein C [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 94 Score = 42.5 bits (99), Expect = 0.017, Method: Composition-based stats. Identities = 14/64 (21%), Positives = 24/64 (37%), Gaps = 2/64 (3%) Query: 44 LDSEVRFSSKVRVPKLYR--VLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQG 101 + ++ +Y V+L ND+ +V L +K AK I ++ H G Sbjct: 5 TKPIFEEETSLKTDSVYSYFVILFNDSIHEFAYVEDCLMKLCFKTKRDAKKIAIEAHTNG 64 Query: 102 IGEC 105 C Sbjct: 65 KAIC 68 >gi|81299287|ref|YP_399495.1| ATP-dependent Clp protease adaptor [Synechococcus elongatus PCC 7942] gi|81168168|gb|ABB56508.1| conserved hypothetical protein [Synechococcus elongatus PCC 7942] Length = 136 Score = 42.5 bits (99), Expect = 0.019, Method: Composition-based stats. Identities = 15/64 (23%), Positives = 29/64 (45%), Gaps = 2/64 (3%) Query: 53 KVRVP-KLYRVLLVNDNYTPMEFVIHVLQNFF-YKDHETAKCIMLKVHHQGIGECGVYAY 110 +VR P +RV++++D+ + V L + + A + +VH++G Sbjct: 54 RVRQPYPHFRVIVLDDDVNTFQHVAECLLKYIPGMTGDRAWDLTNQVHYEGAATVWSGPQ 113 Query: 111 EIAE 114 E AE Sbjct: 114 EQAE 117 >gi|88808607|ref|ZP_01124117.1| ATP-dependent Clp protease adaptor protein ClpS [Synechococcus sp. WH 7805] gi|88787595|gb|EAR18752.1| ATP-dependent Clp protease adaptor protein ClpS [Synechococcus sp. WH 7805] Length = 111 Score = 42.5 bits (99), Expect = 0.020, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 29/68 (42%), Gaps = 2/68 (2%) Query: 48 VRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFF-YKDHETAKCIMLKVHHQGIGECG 106 R +R P+ RV+++ND+ E V+ L + + A + +V +G E Sbjct: 26 ERDRQALRYPQ-ARVIVLNDDVNTFEHVVESLCRIIPGMNTDKAWALARRVDGEGSAEVW 84 Query: 107 VYAYEIAE 114 E AE Sbjct: 85 CGPLEQAE 92 >gi|327405148|ref|YP_004345986.1| ATP-dependent Clp protease adaptor protein ClpS [Fluviicola taffensis DSM 16823] gi|327320656|gb|AEA45148.1| ATP-dependent Clp protease adaptor protein ClpS [Fluviicola taffensis DSM 16823] Length = 89 Score = 42.5 bits (99), Expect = 0.021, Method: Composition-based stats. Identities = 10/44 (22%), Positives = 20/44 (45%) Query: 62 VLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGEC 105 +++ ND+Y + VI L + E A+ +H+ G + Sbjct: 21 LVIFNDDYNTFDHVIESLIKVCKHEVEQAEQCTWIIHYNGKCQV 64 >gi|242009898|ref|XP_002425719.1| ubiquitin-protein ligase E3 component N-recognin-2, putative [Pediculus humanus corporis] gi|212509620|gb|EEB12981.1| ubiquitin-protein ligase E3 component N-recognin-2, putative [Pediculus humanus corporis] Length = 1786 Score = 42.1 bits (98), Expect = 0.022, Method: Composition-based stats. Identities = 16/80 (20%), Positives = 31/80 (38%), Gaps = 1/80 (1%) Query: 57 PKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAY-EIAEM 115 P +Y +L ND E VI+ L A + + +G ++ + E+ Sbjct: 246 PDVYCTVLYNDEIHTFEQVINSLVKIVKCSQRDATEYVTNIDREGRAVVKCTSFQQCQEL 305 Query: 116 KVNQVMNYSRQHQYPLQCIM 135 K + S+ +PL+ + Sbjct: 306 KTDIERFTSKHGGHPLKVEV 325 >gi|82539394|ref|XP_724088.1| hypothetical protein [Plasmodium yoelii yoelii str. 17XNL] gi|23478615|gb|EAA15653.1| hypothetical protein [Plasmodium yoelii yoelii] Length = 120 Score = 42.1 bits (98), Expect = 0.024, Method: Composition-based stats. Identities = 15/76 (19%), Positives = 27/76 (35%), Gaps = 4/76 (5%) Query: 33 NKKGIAEFDNCLDSEVRFSSKVRVPK---LYRVLLVNDNYTPMEFVIHVLQNFFYK-DHE 88 N+ I + E K++ K ++V+L ND+ +V V+ Sbjct: 5 NRNVIKDIKKENKREYADEEKLKREKEAYAWKVILYNDDIHNFTYVTDVIVKVIGYISKA 64 Query: 89 TAKCIMLKVHHQGIGE 104 A I ++ H G Sbjct: 65 KAHTITVEAHSTGQAL 80 >gi|323451978|gb|EGB07853.1| hypothetical protein AURANDRAFT_17179 [Aureococcus anophagefferens] Length = 84 Score = 42.1 bits (98), Expect = 0.024, Method: Composition-based stats. Identities = 12/46 (26%), Positives = 22/46 (47%), Gaps = 1/46 (2%) Query: 61 RVLLVNDNYTPMEFVIHVLQNFF-YKDHETAKCIMLKVHHQGIGEC 105 R+LL ND+ E+V ++LQ + A + + H +G+ Sbjct: 1 RLLLHNDDVHTFEYVTYMLQKIIPTISNAKAYQLTMTTHCEGVSTV 46 >gi|219113881|ref|XP_002176127.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|219121875|ref|XP_002181283.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217402919|gb|EEC42878.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217407269|gb|EEC47206.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 87 Score = 42.1 bits (98), Expect = 0.027, Method: Composition-based stats. Identities = 15/58 (25%), Positives = 24/58 (41%), Gaps = 1/58 (1%) Query: 47 EVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFY-KDHETAKCIMLKVHHQGIG 103 E + R +++RV+L ND +VI L D + A I ++ H G Sbjct: 1 ETLPEEQKRKEEMWRVVLHNDEVHTFNYVIRSLCKVIGTLDRKAAFEICVQTHGIGKA 58 >gi|320167589|gb|EFW44488.1| predicted protein [Capsaspora owczarzaki ATCC 30864] Length = 3095 Score = 42.1 bits (98), Expect = 0.027, Method: Composition-based stats. Identities = 15/65 (23%), Positives = 25/65 (38%) Query: 41 DNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQ 100 D+ + P+L+ V+L ND + VI+ L+ AK + VH + Sbjct: 715 DSAEAPSWANVDEFDNPELFVVVLYNDEKHSFDQVINQLKRGVGMSPSDAKHTAMVVHAE 774 Query: 101 GIGEC 105 G Sbjct: 775 GRAIV 779 >gi|284928874|ref|YP_003421396.1| hypothetical protein UCYN_02930 [cyanobacterium UCYN-A] gi|284809333|gb|ADB95038.1| uncharacterized conserved protein [cyanobacterium UCYN-A] Length = 106 Score = 41.7 bits (97), Expect = 0.029, Method: Composition-based stats. Identities = 13/79 (16%), Positives = 29/79 (36%), Gaps = 1/79 (1%) Query: 37 IAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFF-YKDHETAKCIML 95 I E + + + +++++ND++ + V + L + A + Sbjct: 9 IPETSISTNIKHSAVIDYKPYPNCKIIVLNDDFNTFDHVANCLIRYIPAMTKSHAWELTQ 68 Query: 96 KVHHQGIGECGVYAYEIAE 114 K+H G + E AE Sbjct: 69 KIHFNGFATVWMGPLEQAE 87 >gi|254414360|ref|ZP_05028127.1| ATP-dependent Clp protease adaptor protein ClpS [Microcoleus chthonoplastes PCC 7420] gi|196179035|gb|EDX74032.1| ATP-dependent Clp protease adaptor protein ClpS [Microcoleus chthonoplastes PCC 7420] Length = 63 Score = 41.7 bits (97), Expect = 0.032, Method: Composition-based stats. Identities = 15/44 (34%), Positives = 20/44 (45%), Gaps = 1/44 (2%) Query: 72 MEFVIHVL-QNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAE 114 ME+V+ L Q A IM++ H+ GI A E AE Sbjct: 1 MEYVVQALIQTVPSLTQPQAVNIMMEAHNSGIALVITCALEHAE 44 >gi|70944829|ref|XP_742303.1| hypothetical protein [Plasmodium chabaudi chabaudi] gi|56521205|emb|CAH75820.1| conserved hypothetical protein [Plasmodium chabaudi chabaudi] Length = 190 Score = 41.7 bits (97), Expect = 0.032, Method: Composition-based stats. Identities = 13/94 (13%), Positives = 31/94 (32%), Gaps = 4/94 (4%) Query: 15 RDGILALMSFIFMADSRMNKKGIAEFDNCLDSEVRFSSKVRVPK---LYRVLLVNDNYTP 71 + + + + + + + + E K++ K ++V+L ND+ Sbjct: 58 KKNVTYATGDANLENIKKLRNVVKDIKKENKREYEDEEKLKREKEAYAWKVILYNDDIHN 117 Query: 72 MEFVIHVLQNFFYK-DHETAKCIMLKVHHQGIGE 104 +V V+ A I ++ H G Sbjct: 118 FTYVTDVIVKVIGYISKAKAHTITVEAHSTGQAL 151 >gi|269218714|ref|ZP_06162568.1| ATP-dependent Clp protease adaptor protein ClpS [Actinomyces sp. oral taxon 848 str. F0332] gi|269211825|gb|EEZ78165.1| ATP-dependent Clp protease adaptor protein ClpS [Actinomyces sp. oral taxon 848 str. F0332] Length = 62 Score = 41.7 bits (97), Expect = 0.032, Method: Composition-based stats. Identities = 10/34 (29%), Positives = 20/34 (58%) Query: 72 MEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGEC 105 M +V V +++F+ A+ +ML+VH++G Sbjct: 1 MTYVEWVFESYFHISRRRARMLMLQVHNEGRAVV 34 >gi|78185910|ref|YP_373953.1| hypothetical protein Plut_0018 [Chlorobium luteolum DSM 273] gi|78165812|gb|ABB22910.1| conserved hypothetical protein [Chlorobium luteolum DSM 273] Length = 109 Score = 41.7 bits (97), Expect = 0.035, Method: Composition-based stats. Identities = 17/82 (20%), Positives = 29/82 (35%), Gaps = 3/82 (3%) Query: 27 MADSRMNKKGIAEFDNCLDSEVRFSSKVR---VPKLYRVLLVNDNYTPMEFVIHVLQNFF 83 M R+++ D E S YRV+L ND + VI + Sbjct: 1 MKPLRISRDMYTCIDPGTKHETLESPATPGTDTGDAYRVVLFNDEEHSFDEVIFQIILAV 60 Query: 84 YKDHETAKCIMLKVHHQGIGEC 105 + A+ + ++VH+ G Sbjct: 61 RCSRQKAQQLTMEVHNSGRAIV 82 >gi|68074201|ref|XP_679015.1| hypothetical protein [Plasmodium berghei strain ANKA] gi|56499653|emb|CAH94208.1| conserved hypothetical protein [Plasmodium berghei] Length = 187 Score = 41.3 bits (96), Expect = 0.038, Method: Composition-based stats. Identities = 14/75 (18%), Positives = 26/75 (34%), Gaps = 4/75 (5%) Query: 34 KKGIAEFDNCLDSEVRFSSKVRVPK---LYRVLLVNDNYTPMEFVIHVLQNFFYK-DHET 89 + I + E K++ K ++V+L ND+ +V V+ Sbjct: 78 RNVIKDIKKESKREYADEEKLKREKEAYAWKVILYNDDIHNFTYVTDVIVKVIGYISKAK 137 Query: 90 AKCIMLKVHHQGIGE 104 A I ++ H G Sbjct: 138 AHTITVEAHSTGQAL 152 >gi|148242507|ref|YP_001227664.1| ATP-dependent Clp protease adaptor [Synechococcus sp. RCC307] gi|147850817|emb|CAK28311.1| ATP-dependent Clp protease adaptor protein ClpS [Synechococcus sp. RCC307] Length = 98 Score = 41.3 bits (96), Expect = 0.045, Method: Composition-based stats. Identities = 12/58 (20%), Positives = 24/58 (41%), Gaps = 1/58 (1%) Query: 58 KLYRVLLVNDNYTPMEFVIHVLQNFF-YKDHETAKCIMLKVHHQGIGECGVYAYEIAE 114 ++V+++ND + V+ L + D + A + ++ G V E AE Sbjct: 22 PNFKVVVLNDEVNTFQHVVDCLVKYIPAMDPDRAWSLAQQIDSDGQAVVWVGPQEQAE 79 >gi|119355896|ref|YP_910540.1| ATP-dependent Clp protease adaptor protein ClpS [Chlorobium phaeobacteroides DSM 266] gi|119353245|gb|ABL64116.1| ATP-dependent Clp protease adaptor protein ClpS [Chlorobium phaeobacteroides DSM 266] Length = 105 Score = 40.6 bits (94), Expect = 0.068, Method: Composition-based stats. Identities = 17/65 (26%), Positives = 27/65 (41%), Gaps = 3/65 (4%) Query: 46 SEVRFSSKVRVPKL---YRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGI 102 E R + + P L YRV+L ND + VI + + + A+ +VH +G Sbjct: 16 PETRQTEQSSGPDLLDAYRVVLYNDEEHTFDEVISQIIKAVQCNRQKAERCTWEVHTKGR 75 Query: 103 GECGV 107 V Sbjct: 76 SVVFV 80 >gi|332170809|gb|AEE20064.1| ATP-dependent Clp protease adaptor protein ClpS [Krokinobacter diaphorus 4H-3-7-5] Length = 91 Score = 40.6 bits (94), Expect = 0.069, Method: Composition-based stats. Identities = 12/64 (18%), Positives = 21/64 (32%) Query: 42 NCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQG 101 N + + ++L ND + VI+ L + A L VH++G Sbjct: 3 NQEKYQEDVDVLTEETPSHEIILYNDEVNTFDHVINTLIYACDHEENQAHQCALLVHYKG 62 Query: 102 IGEC 105 Sbjct: 63 KCSV 66 >gi|305664962|ref|YP_003861249.1| ribosomal protein L11 methyltransferase [Maribacter sp. HTCC2170] gi|88707792|gb|EAR00032.1| ribosomal protein L11 methyltransferase [Maribacter sp. HTCC2170] Length = 91 Score = 40.6 bits (94), Expect = 0.072, Method: Composition-based stats. Identities = 12/45 (26%), Positives = 17/45 (37%) Query: 61 RVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGEC 105 ++L ND + VI L E A+ L VH+ G Sbjct: 22 EIVLFNDEVNTFDHVIDTLIAACDHTPEQAEQCSLIVHYNGKCTV 66 >gi|298209257|ref|YP_003717436.1| hypothetical protein CA2559_13473 [Croceibacter atlanticus HTCC2559] gi|83849184|gb|EAP87053.1| hypothetical protein CA2559_13473 [Croceibacter atlanticus HTCC2559] Length = 91 Score = 40.6 bits (94), Expect = 0.081, Method: Composition-based stats. Identities = 13/53 (24%), Positives = 21/53 (39%) Query: 53 KVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGEC 105 K K ++L ND+ + VI L + A+ L VH++G Sbjct: 14 KTVEKKENEIVLYNDDVNTFDHVIETLISACDHQPLQAEQCALLVHYKGKCTV 66 >gi|163756853|ref|ZP_02163962.1| nucleoside triphosphate pyrophosphohydrolase [Kordia algicida OT-1] gi|161323242|gb|EDP94582.1| nucleoside triphosphate pyrophosphohydrolase [Kordia algicida OT-1] Length = 91 Score = 40.2 bits (93), Expect = 0.10, Method: Composition-based stats. Identities = 13/51 (25%), Positives = 21/51 (41%) Query: 61 RVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYE 111 ++L ND+ + VI L E A+ + VH++G YE Sbjct: 22 EIVLYNDDVNTFDHVIETLIYACDHTAEQAEQCSIIVHYKGKCTVKTGKYE 72 >gi|194332900|ref|YP_002014760.1| ATP-dependent Clp protease adaptor protein ClpS [Prosthecochloris aestuarii DSM 271] gi|194310718|gb|ACF45113.1| ATP-dependent Clp protease adaptor protein ClpS [Prosthecochloris aestuarii DSM 271] Length = 101 Score = 39.8 bits (92), Expect = 0.12, Method: Composition-based stats. Identities = 12/46 (26%), Positives = 19/46 (41%) Query: 60 YRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGEC 105 YRV+L ND+ + VI + A+ +VH +G Sbjct: 29 YRVILFNDDVHTFDEVIIQIIKAVACSRAKAEQHTWEVHTRGRSIV 74 >gi|221061051|ref|XP_002262095.1| ATP-dependent Clp protease adaptor protein [Plasmodium knowlesi strain H] gi|193811245|emb|CAQ41973.1| ATP-dependent Clp protease adaptor protein,putative [Plasmodium knowlesi strain H] Length = 227 Score = 39.8 bits (92), Expect = 0.13, Method: Composition-based stats. Identities = 12/60 (20%), Positives = 24/60 (40%), Gaps = 2/60 (3%) Query: 46 SEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYK-DHETAKCIMLKVHHQGIGE 104 SE + + + ++V+L ND+ +V V+ + A I ++ H G Sbjct: 127 SEEKQKRE-KETTAWKVILYNDDIHNFTYVTDVIVKVIGQISKAKAHTITVEAHSTGQAL 185 >gi|113955042|ref|YP_730629.1| ATP-dependent Clp protease adaptor [Synechococcus sp. CC9311] gi|113882393|gb|ABI47351.1| ATP-dependent Clp protease adaptor protein ClpS [Synechococcus sp. CC9311] Length = 98 Score = 39.4 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 15/66 (22%), Positives = 28/66 (42%), Gaps = 2/66 (3%) Query: 50 FSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFF-YKDHETAKCIMLKVHHQGIGECGVY 108 + +R P RV+++ND+ E V+ L + + A + ++ +G E Sbjct: 15 ERTTLRYPN-ARVIVLNDDVNTFEHVVECLCKIIPGMNSDKAWTLAHQIDGEGAAEVWAG 73 Query: 109 AYEIAE 114 E AE Sbjct: 74 PLEPAE 79 >gi|325287228|ref|YP_004263018.1| ATP-dependent Clp protease adaptor protein ClpS [Cellulophaga lytica DSM 7489] gi|324322682|gb|ADY30147.1| ATP-dependent Clp protease adaptor protein ClpS [Cellulophaga lytica DSM 7489] Length = 91 Score = 39.0 bits (90), Expect = 0.19, Method: Composition-based stats. Identities = 11/50 (22%), Positives = 20/50 (40%) Query: 61 RVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAY 110 ++L ND+ + VI L + A+ VH++G +Y Sbjct: 22 EIVLFNDDVNTFDHVIDTLVDACDHTPIQAEQCAFLVHYKGKCTVKTGSY 71 >gi|87302745|ref|ZP_01085556.1| hypothetical protein WH5701_13370 [Synechococcus sp. WH 5701] gi|87282628|gb|EAQ74586.1| hypothetical protein WH5701_13370 [Synechococcus sp. WH 5701] Length = 96 Score = 39.0 bits (90), Expect = 0.21, Method: Composition-based stats. Identities = 14/66 (21%), Positives = 28/66 (42%), Gaps = 2/66 (3%) Query: 50 FSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFF-YKDHETAKCIMLKVHHQGIGECGVY 108 + R P L RV++++D+ + V++ L + + A + ++ QG Sbjct: 13 IRQRQRYPHL-RVVVLDDDVNTFQHVVNCLVRYLPGMGPDRAWELAHQIDSQGSAVVWSG 71 Query: 109 AYEIAE 114 E AE Sbjct: 72 PQEQAE 77 >gi|189345584|ref|YP_001942113.1| ATP-dependent Clp protease adaptor protein ClpS [Chlorobium limicola DSM 245] gi|189339731|gb|ACD89134.1| ATP-dependent Clp protease adaptor protein ClpS [Chlorobium limicola DSM 245] Length = 102 Score = 39.0 bits (90), Expect = 0.22, Method: Composition-based stats. Identities = 12/46 (26%), Positives = 19/46 (41%) Query: 60 YRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGEC 105 YRV+L ND + VI + A+ + +VH +G Sbjct: 30 YRVVLFNDEEHSFDEVIFQIIKAVNCSRSKAEKLTWEVHSRGRAIV 75 >gi|33865838|ref|NP_897397.1| ATP-dependent Clp protease adaptor [Synechococcus sp. WH 8102] gi|33633008|emb|CAE07819.1| conserved hypothetical protein [Synechococcus sp. WH 8102] Length = 98 Score = 38.6 bits (89), Expect = 0.25, Method: Composition-based stats. Identities = 13/68 (19%), Positives = 27/68 (39%), Gaps = 1/68 (1%) Query: 48 VRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFF-YKDHETAKCIMLKVHHQGIGECG 106 + + + RV++++D+ + V+ L+ E A + ++ QG E Sbjct: 12 LERQTITQRYPQARVIVLDDDVNTFQHVVDCLRKIIPGMSEEKAWSLANRIDGQGSAEVW 71 Query: 107 VYAYEIAE 114 E AE Sbjct: 72 CGPLEQAE 79 >gi|325114160|emb|CBZ49718.1| putative ATP-dependent Clp protease adaptor domain-containing protein [Neospora caninum Liverpool] Length = 156 Score = 38.6 bits (89), Expect = 0.25, Method: Composition-based stats. Identities = 12/61 (19%), Positives = 25/61 (40%), Gaps = 1/61 (1%) Query: 45 DSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQN-FFYKDHETAKCIMLKVHHQGIG 103 D + + + + K ++V+L ND+ + V +L + A I + H G+ Sbjct: 28 DDQKKQAERRERLKAWQVVLHNDDIHAIPHVTDLLVDAVPSLTKAKAHSITVHAHKTGLA 87 Query: 104 E 104 Sbjct: 88 L 88 >gi|116074794|ref|ZP_01472055.1| ATP-dependent Clp protease adaptor protein ClpS [Synechococcus sp. RS9916] gi|116068016|gb|EAU73769.1| ATP-dependent Clp protease adaptor protein ClpS [Synechococcus sp. RS9916] Length = 98 Score = 38.2 bits (88), Expect = 0.38, Method: Composition-based stats. Identities = 15/55 (27%), Positives = 23/55 (41%), Gaps = 1/55 (1%) Query: 61 RVLLVNDNYTPMEFVIHVLQNFF-YKDHETAKCIMLKVHHQGIGECGVYAYEIAE 114 RV+++ND+ + V+ L E A + +V QG E E AE Sbjct: 25 RVIVLNDDVNTFQHVVDCLCKIIPGMGTERAWDLAHQVDGQGSAEVWCGPLEQAE 79 >gi|124513168|ref|XP_001349940.1| ATP-dependent Clp protease adaptor protein ClpS containing protein [Plasmodium falciparum 3D7] gi|23615357|emb|CAD52348.1| ATP-dependent Clp protease adaptor protein ClpS containing protein [Plasmodium falciparum 3D7] Length = 192 Score = 38.2 bits (88), Expect = 0.40, Method: Composition-based stats. Identities = 10/46 (21%), Positives = 19/46 (41%), Gaps = 1/46 (2%) Query: 60 YRVLLVNDNYTPMEFVIHVLQNFFYK-DHETAKCIMLKVHHQGIGE 104 ++V+L ND+ +V V+ + A I ++ H G Sbjct: 110 WKVILYNDDIHNFTYVTDVIVKVVGQISKAKAHTITVEAHSTGQAL 155 >gi|78189970|ref|YP_380308.1| hypothetical protein Cag_2017 [Chlorobium chlorochromatii CaD3] gi|78172169|gb|ABB29265.1| hypothetical protein Cag_2017 [Chlorobium chlorochromatii CaD3] Length = 118 Score = 38.2 bits (88), Expect = 0.41, Method: Composition-based stats. Identities = 13/46 (28%), Positives = 18/46 (39%) Query: 60 YRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGEC 105 +RV+L ND E VI L A+ + VH +G Sbjct: 45 FRVILFNDEEHTFEEVIQQLMIALSCTRSKAERLTWVVHTRGRCMV 90 >gi|183222314|ref|YP_001840310.1| putative signal peptide [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189912362|ref|YP_001963917.1| ATP-dependent Clp protease adaptor protein [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167777038|gb|ABZ95339.1| ATP-dependent Clp protease adaptor protein [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167780736|gb|ABZ99034.1| Conserved hypothetical protein; putative signal peptide [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 108 Score = 37.9 bits (87), Expect = 0.42, Method: Composition-based stats. Identities = 13/74 (17%), Positives = 31/74 (41%), Gaps = 3/74 (4%) Query: 32 MNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAK 91 M G + ++E++ + ++V+L +D++ E+VI +L + E A Sbjct: 1 MTGSGATQPSILEETEIKP---TKHDGPWKVVLWDDDHHTYEYVIEMLMDVCQMTWEKAF 57 Query: 92 CIMLKVHHQGIGEC 105 ++V + Sbjct: 58 QHAVEVDTRKKTIV 71 >gi|156083184|ref|XP_001609076.1| ATP-dependent Clp protease adaptor protein ClpS domain containing protein [Babesia bovis T2Bo] gi|154796326|gb|EDO05508.1| ATP-dependent Clp protease adaptor protein ClpS domain containing protein [Babesia bovis] Length = 217 Score = 37.9 bits (87), Expect = 0.43, Method: Composition-based stats. Identities = 12/64 (18%), Positives = 25/64 (39%), Gaps = 2/64 (3%) Query: 43 CLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQN-FFYKDHETAKCIMLKVHHQG 101 +D + + K +RV++ ND+ + +V + + E A I ++ H G Sbjct: 91 SMDDQTKQERK-EETTAWRVVIYNDDIHSIPYVTESIADAIPQISREVAHTITMEAHSTG 149 Query: 102 IGEC 105 Sbjct: 150 QATV 153 >gi|145218844|ref|YP_001129553.1| ATP-dependent Clp protease adaptor protein ClpS [Prosthecochloris vibrioformis DSM 265] gi|145205008|gb|ABP36051.1| ATP-dependent Clp protease adaptor protein ClpS [Chlorobium phaeovibrioides DSM 265] Length = 93 Score = 37.9 bits (87), Expect = 0.44, Method: Composition-based stats. Identities = 14/70 (20%), Positives = 28/70 (40%), Gaps = 5/70 (7%) Query: 43 CLDSEVRFSSKVR---VPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHH 99 + E + + + + +RV+L ND + VI + A+ + ++VH+ Sbjct: 2 EAEPETKVLASIPGVGTSEPFRVVLFNDEEHSFDEVIFQIIKAVRCSRAKAEALTMEVHN 61 Query: 100 QGIGECGVYA 109 G VY Sbjct: 62 SGRSI--VYT 69 >gi|194335225|ref|YP_002017019.1| ATP-dependent Clp protease adaptor protein ClpS [Pelodictyon phaeoclathratiforme BU-1] gi|194307702|gb|ACF42402.1| ATP-dependent Clp protease adaptor protein ClpS [Pelodictyon phaeoclathratiforme BU-1] Length = 105 Score = 37.9 bits (87), Expect = 0.44, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 23/63 (36%), Gaps = 3/63 (4%) Query: 46 SEVRFSSKVRVPKL---YRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGI 102 + + P L YRV+L ND E VI + + A+ +VH +G Sbjct: 16 PVTKQREQGSGPDLLDAYRVVLFNDEEHTFEEVIEQIIKAVRCSRQKAEKHTWEVHTRGR 75 Query: 103 GEC 105 Sbjct: 76 SIV 78 >gi|156102867|ref|XP_001617126.1| ATP-dependent Clp protease adaptor protein ClpS containing protein [Plasmodium vivax SaI-1] gi|148806000|gb|EDL47399.1| ATP-dependent Clp protease adaptor protein ClpS containing protein [Plasmodium vivax] Length = 197 Score = 37.9 bits (87), Expect = 0.48, Method: Composition-based stats. Identities = 12/60 (20%), Positives = 24/60 (40%), Gaps = 2/60 (3%) Query: 46 SEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYK-DHETAKCIMLKVHHQGIGE 104 SE R + + ++V+L ND+ +V ++ + A I ++ H G Sbjct: 97 SEERQKRE-KETTAWKVILYNDDIHNFTYVTDMIVKVIGQISKAKAHTITVEAHSTGQAL 155 >gi|307187669|gb|EFN72641.1| E3 ubiquitin-protein ligase UBR2 [Camponotus floridanus] Length = 1784 Score = 37.9 bits (87), Expect = 0.51, Method: Composition-based stats. Identities = 13/51 (25%), Positives = 22/51 (43%), Gaps = 2/51 (3%) Query: 60 YRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGE--CGVY 108 Y +L ND + + VI++LQ + A + V +G C V+ Sbjct: 253 YCTVLFNDEHHTFDQVINMLQRVIKCSQKEAVEFVTNVDREGRAVVKCSVF 303 >gi|260825207|ref|XP_002607558.1| hypothetical protein BRAFLDRAFT_119718 [Branchiostoma floridae] gi|229292906|gb|EEN63568.1| hypothetical protein BRAFLDRAFT_119718 [Branchiostoma floridae] Length = 1216 Score = 37.9 bits (87), Expect = 0.51, Method: Composition-based stats. Identities = 18/91 (19%), Positives = 29/91 (31%), Gaps = 10/91 (10%) Query: 15 RDGILALMSFIFMADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEF 74 R S++ D + G + DN + K +Y ME Sbjct: 771 RVTPPPTSSYLNGDDDPESPNGDLDMDNVTRVRLVQFQKNTEEPMYD----------MEN 820 Query: 75 VIHVLQNFFYKDHETAKCIMLKVHHQGIGEC 105 V V F K+ + I LK++ +G Sbjct: 821 VTRVRLIQFQKNTDEPMGITLKMNEEGRCVV 851 >gi|318041538|ref|ZP_07973494.1| ATP-dependent Clp protease adaptor [Synechococcus sp. CB0101] Length = 93 Score = 37.9 bits (87), Expect = 0.53, Method: Composition-based stats. Identities = 16/69 (23%), Positives = 30/69 (43%), Gaps = 2/69 (2%) Query: 48 VRFSSKVRVP-KLYRVLLVNDNYTPMEFVIHVLQNFF-YKDHETAKCIMLKVHHQGIGEC 105 VR +V P RV++++D++ + V+ VL + + A + ++ QG Sbjct: 6 VRDKQRVDAPYPTGRVIVLDDDHNTFQHVVEVLVRYIPAMTSDRAWELAHQIDGQGSALV 65 Query: 106 GVYAYEIAE 114 E AE Sbjct: 66 WSGPLEQAE 74 >gi|209867672|gb|ACI90360.1| ubiquitin ligase E3 alpha-II-like protein [Philodina roseola] Length = 1580 Score = 37.5 bits (86), Expect = 0.61, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 30/78 (38%), Gaps = 2/78 (2%) Query: 58 KLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAEMKV 117 K Y +L ND E VI+VL V +G + ++E + + Sbjct: 285 KKYVTMLFNDEVHTYEQVINVLSRAIQCTKAEGHEFASLVDREGRTAIRIGSFE--QCRD 342 Query: 118 NQVMNYSRQHQYPLQCIM 135 Q R + PL+C++ Sbjct: 343 AQETIRLRTAELPLKCVI 360 >gi|170114993|ref|XP_001888692.1| predicted protein [Laccaria bicolor S238N-H82] gi|164636387|gb|EDR00683.1| predicted protein [Laccaria bicolor S238N-H82] Length = 1814 Score = 37.5 bits (86), Expect = 0.62, Method: Composition-based stats. Identities = 17/87 (19%), Positives = 34/87 (39%), Gaps = 1/87 (1%) Query: 19 LALMSFIFMADS-RMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIH 77 + F+ D+ + + + N D ++ S+ + Y V+L ND E VI Sbjct: 223 TVAFALDFLLDTLDYSPEDPSVPANEADLRLQPSADPMMKDQYCVILWNDEKHSFEEVIK 282 Query: 78 VLQNFFYKDHETAKCIMLKVHHQGIGE 104 +L + + E A + ++ G Sbjct: 283 LLCDMTNRSREDATQVTQRIDENGREI 309 >gi|119510879|ref|ZP_01630003.1| ATP-dependent Clp protease adaptor protein ClpS [Nodularia spumigena CCY9414] gi|119464488|gb|EAW45401.1| ATP-dependent Clp protease adaptor protein ClpS [Nodularia spumigena CCY9414] Length = 63 Score = 37.5 bits (86), Expect = 0.63, Method: Composition-based stats. Identities = 13/44 (29%), Positives = 17/44 (38%), Gaps = 1/44 (2%) Query: 72 MEFVIHVLQN-FFYKDHETAKCIMLKVHHQGIGECGVYAYEIAE 114 ME V+ L A IM++ H G+ A E AE Sbjct: 1 MEHVVQSLITTVPSLTQPQAVSIMMEAHTNGMALVITCAQEHAE 44 >gi|161347556|ref|YP_291789.2| ATP-dependent Clp protease adaptor [Prochlorococcus marinus str. NATL2A] gi|161407969|ref|YP_001015218.2| ATP-dependent Clp protease adaptor [Prochlorococcus marinus str. NATL1A] Length = 98 Score = 37.1 bits (85), Expect = 0.88, Method: Composition-based stats. Identities = 16/74 (21%), Positives = 36/74 (48%), Gaps = 5/74 (6%) Query: 42 NCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFF-YKDHETAKCIMLKVHHQ 100 LD + +K++ P+ R+++++DN+ E V + L + + + ++V + Sbjct: 10 TVLDPKT---TKIKYPE-ARIIVLDDNFNTFEHVANCLVTIIPGMSEKRSWELAVEVDRE 65 Query: 101 GIGECGVYAYEIAE 114 G+ E +E AE Sbjct: 66 GLAEVWRGPFEQAE 79 >gi|71033697|ref|XP_766490.1| hypothetical protein [Theileria parva strain Muguga] gi|68353447|gb|EAN34207.1| hypothetical protein TP01_0969 [Theileria parva] Length = 198 Score = 37.1 bits (85), Expect = 0.91, Method: Composition-based stats. Identities = 16/79 (20%), Positives = 27/79 (34%), Gaps = 8/79 (10%) Query: 51 SSKVRVPKLYRVLLVNDNYTPMEFVIHVLQN-FFYKDHETAKCIMLKVHHQGIGECGVYA 109 + + +RV+L ND+ +V + A I L+ H G Sbjct: 113 EEREKEVNSWRVILYNDDIHNFMYVTESISKCVPQLPLARAHLITLEAHKNGQA------ 166 Query: 110 YEIAEMKVNQVMNYSRQHQ 128 EI ++ Y R+ Q Sbjct: 167 -EIIRTWKDKAEQYCRELQ 184 >gi|157120908|ref|XP_001659789.1| ubiquitin ligase E3 alpha [Aedes aegypti] gi|108874767|gb|EAT38992.1| ubiquitin ligase E3 alpha [Aedes aegypti] Length = 2550 Score = 36.7 bits (84), Expect = 0.95, Method: Composition-based stats. Identities = 16/83 (19%), Positives = 29/83 (34%), Gaps = 9/83 (10%) Query: 60 YRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEI------- 112 Y +L ND E VI L + + A + + +G ++E Sbjct: 1009 YCTILYNDETHTFEQVIQTLTSIVKCTQKEAIEYVTSIDREGRAVVKCASFETCKKLKED 1068 Query: 113 AEMKVNQVMNYSRQHQYPLQCIM 135 E KV + ++ PL+ + Sbjct: 1069 VENKVIRSSMTAKAS--PLKVTV 1089 >gi|294506972|ref|YP_003571030.1| ATP-dependent Clp protease adaptor protein clpS, [Salinibacter ruber M8] gi|294343300|emb|CBH24078.1| ATP-dependent Clp protease adaptor protein clpS, putative [Salinibacter ruber M8] Length = 112 Score = 36.7 bits (84), Expect = 0.99, Method: Composition-based stats. Identities = 12/44 (27%), Positives = 17/44 (38%) Query: 62 VLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGEC 105 V+L ND E VI L A+ + VH++G Sbjct: 43 VILFNDEVHTFEEVIGQLVKATGCSRSEAEDMAWTVHNEGKATV 86 >gi|157413367|ref|YP_001484233.1| ATP-dependent Clp protease adaptor [Prochlorococcus marinus str. MIT 9215] gi|157387942|gb|ABV50647.1| Hypothetical protein P9215_10321 [Prochlorococcus marinus str. MIT 9215] Length = 95 Score = 36.7 bits (84), Expect = 0.99, Method: Composition-based stats. Identities = 13/56 (23%), Positives = 27/56 (48%), Gaps = 2/56 (3%) Query: 51 SSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFF-YKDHETAKCIMLKVHHQGIGEC 105 SK + P+ RV++++D++ ++V + L A+ + +KV G E Sbjct: 13 KSKAKYPE-ARVIVLDDSFNTFQYVANCLLTIIPSMSERRARDLTIKVDKTGSAEV 67 >gi|315080002|gb|EFT51978.1| conserved domain protein [Propionibacterium acnes HL078PA1] Length = 47 Score = 36.7 bits (84), Expect = 1.1, Method: Composition-based stats. Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 6/49 (12%) Query: 89 TAKCIMLKVHHQGIGECGVYAYEIAEMKVNQVMNYSRQHQYPLQCIMEQ 137 A +M++VH+QG + E EM+V V H Y LQ +E+ Sbjct: 1 RATQLMIQVHNQGRATVAEGSKE--EMEVA-VHAM---HGYGLQASVEK 43 >gi|72002284|gb|AAZ58086.1| conserved hypothetical protein [Prochlorococcus marinus str. NATL2A] gi|123961170|gb|ABM75953.1| Hypothetical protein NATL1_13951 [Prochlorococcus marinus str. NATL1A] Length = 111 Score = 36.7 bits (84), Expect = 1.1, Method: Composition-based stats. Identities = 16/74 (21%), Positives = 36/74 (48%), Gaps = 5/74 (6%) Query: 42 NCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFF-YKDHETAKCIMLKVHHQ 100 LD + +K++ P+ R+++++DN+ E V + L + + + ++V + Sbjct: 23 TVLDPKT---TKIKYPE-ARIIVLDDNFNTFEHVANCLVTIIPGMSEKRSWELAVEVDRE 78 Query: 101 GIGECGVYAYEIAE 114 G+ E +E AE Sbjct: 79 GLAEVWRGPFEQAE 92 >gi|83815654|ref|YP_445096.1| ATP-dependent Clp protease adaptor protein ClpS, putative [Salinibacter ruber DSM 13855] gi|83757048|gb|ABC45161.1| ATP-dependent Clp protease adaptor protein ClpS, putative [Salinibacter ruber DSM 13855] Length = 115 Score = 36.7 bits (84), Expect = 1.2, Method: Composition-based stats. Identities = 12/44 (27%), Positives = 17/44 (38%) Query: 62 VLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGEC 105 V+L ND E VI L A+ + VH++G Sbjct: 46 VILFNDEVHTFEEVIGQLVKATGCSRSEAEDMAWTVHNEGKATV 89 >gi|147856457|emb|CAN80769.1| hypothetical protein VITISV_013866 [Vitis vinifera] Length = 761 Score = 36.3 bits (83), Expect = 1.2, Method: Composition-based stats. Identities = 18/61 (29%), Positives = 27/61 (44%), Gaps = 3/61 (4%) Query: 52 SKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGE---CGVY 108 +++R P Y LL N P FV + F+ + AK +++ H QG G VY Sbjct: 44 TRLRAPPHYTHLLFNSTLNPNVFVFTSMLRFYSHLQDHAKVVLMFEHMQGCGVRPDAFVY 103 Query: 109 A 109 Sbjct: 104 P 104 >gi|149370136|ref|ZP_01889987.1| hypothetical protein SCB49_03644 [unidentified eubacterium SCB49] gi|149356627|gb|EDM45183.1| hypothetical protein SCB49_03644 [unidentified eubacterium SCB49] Length = 91 Score = 36.3 bits (83), Expect = 1.2, Method: Composition-based stats. Identities = 12/50 (24%), Positives = 20/50 (40%) Query: 62 VLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYE 111 ++L ND+ + VI L A+ VH++G +YE Sbjct: 23 IVLFNDDVNTFDDVIDALVYACDHTPLQAEQCATLVHYKGKCTVKTGSYE 72 >gi|78212974|ref|YP_381753.1| ATP-dependent Clp protease adaptor [Synechococcus sp. CC9605] gi|78197433|gb|ABB35198.1| conserved hypothetical protein [Synechococcus sp. CC9605] Length = 98 Score = 36.3 bits (83), Expect = 1.3, Method: Composition-based stats. Identities = 12/62 (19%), Positives = 25/62 (40%), Gaps = 1/62 (1%) Query: 54 VRVPKLYRVLLVNDNYTPMEFVIHVLQNFF-YKDHETAKCIMLKVHHQGIGECGVYAYEI 112 + RV++++D+ + V+ L+ + A + ++ QG E E Sbjct: 18 TQRYPQARVIVLDDDVNTFQHVVDCLRKIIPGMSEDNAWNLANRIDGQGSAEVWCGPLEQ 77 Query: 113 AE 114 AE Sbjct: 78 AE 79 >gi|145499862|ref|XP_001435915.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124403052|emb|CAK68518.1| unnamed protein product [Paramecium tetraurelia] Length = 429 Score = 36.3 bits (83), Expect = 1.5, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 8/62 (12%) Query: 64 LVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIAE-----MKVN 118 ++N ++ ++VI +L FF + E A M H G G Y +AE K+N Sbjct: 140 MMNSSWDAADYVIELLAQFFELNKELANARM---HIWGESYAGHYIPVLAEKIKKQTKIN 196 Query: 119 QV 120 V Sbjct: 197 LV 198 >gi|317970016|ref|ZP_07971406.1| ATP-dependent Clp protease adaptor [Synechococcus sp. CB0205] Length = 103 Score = 35.9 bits (82), Expect = 1.7, Method: Composition-based stats. Identities = 16/69 (23%), Positives = 31/69 (44%), Gaps = 2/69 (2%) Query: 48 VRFSSKVRVP-KLYRVLLVNDNYTPMEFVIHVL-QNFFYKDHETAKCIMLKVHHQGIGEC 105 V +VR P RV++++D++ + V+ VL ++ + A + ++ QG Sbjct: 16 VMERQRVRAPYPTGRVIVLDDDHNTFQHVVEVLVKHIPAMVSDRAWELAHQIDSQGSAVV 75 Query: 106 GVYAYEIAE 114 E AE Sbjct: 76 WSGPLEQAE 84 >gi|95007079|emb|CAJ20295.1| ATP-dependent Clp protease adaptor protein C,putative [Toxoplasma gondii RH] Length = 226 Score = 35.9 bits (82), Expect = 1.9, Method: Composition-based stats. Identities = 11/58 (18%), Positives = 23/58 (39%), Gaps = 1/58 (1%) Query: 49 RFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQN-FFYKDHETAKCIMLKVHHQGIGEC 105 + + + K ++V+L ND + V +L + A I ++ H G+ Sbjct: 98 KQAERRARLKAWQVVLHNDEIHAIPHVTDLLVDAVPSLTKAKAHSITVQAHKTGLALV 155 >gi|237844445|ref|XP_002371520.1| ATP-dependent Clp protease adaptor domain-containing protein [Toxoplasma gondii ME49] gi|211969184|gb|EEB04380.1| ATP-dependent Clp protease adaptor domain-containing protein [Toxoplasma gondii ME49] gi|221481196|gb|EEE19597.1| ATP-dependent Clp protease adaptor domain-containing protein, putative [Toxoplasma gondii GT1] gi|221501744|gb|EEE27504.1| ATP-dependent Clp protease adaptor domain-containing protein, putative [Toxoplasma gondii VEG] Length = 389 Score = 35.9 bits (82), Expect = 1.9, Method: Composition-based stats. Identities = 11/58 (18%), Positives = 23/58 (39%), Gaps = 1/58 (1%) Query: 49 RFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQN-FFYKDHETAKCIMLKVHHQGIGEC 105 + + + K ++V+L ND + V +L + A I ++ H G+ Sbjct: 261 KQAERRARLKAWQVVLHNDEIHAIPHVTDLLVDAVPSLTKAKAHSITVQAHKTGLALV 318 >gi|91080927|ref|XP_974039.1| PREDICTED: similar to ubiquitin ligase E3 alpha [Tribolium castaneum] gi|270005384|gb|EFA01832.1| hypothetical protein TcasGA2_TC007434 [Tribolium castaneum] Length = 1757 Score = 35.9 bits (82), Expect = 2.0, Method: Composition-based stats. Identities = 17/77 (22%), Positives = 29/77 (37%), Gaps = 1/77 (1%) Query: 60 YRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYE-IAEMKVN 118 Y +L ND E VI L + TA + + +G +++ E+K Sbjct: 226 YCTILYNDEIHTFEQVISTLTRVLKCNQRTAIEFVTNIDREGRAVVKCSSFQHCTELKQE 285 Query: 119 QVMNYSRQHQYPLQCIM 135 SR PL+ ++ Sbjct: 286 IEKYTSRHGNKPLKVLV 302 >gi|322780883|gb|EFZ10112.1| hypothetical protein SINV_80283 [Solenopsis invicta] Length = 1800 Score = 35.6 bits (81), Expect = 2.1, Method: Composition-based stats. Identities = 11/51 (21%), Positives = 21/51 (41%), Gaps = 2/51 (3%) Query: 60 YRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGE--CGVY 108 Y +L ND + + VI++L + A + V +G C ++ Sbjct: 254 YCTVLFNDEHHTFDQVINMLTRVLKCSQKEAVEYVTNVDREGRAVIKCSIF 304 >gi|326672781|ref|XP_001921590.3| PREDICTED: e3 ubiquitin-protein ligase UBR2 [Danio rerio] Length = 1756 Score = 35.6 bits (81), Expect = 2.2, Method: Composition-based stats. Identities = 24/95 (25%), Positives = 34/95 (35%), Gaps = 5/95 (5%) Query: 45 DSEVRFSSKVRVPK---LYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQG 101 D E + P +Y +L ND E VI+ LQ + A V G Sbjct: 210 DKEDELPEGLEPPARGDMYYCMLFNDEVHTYEQVIYTLQKAVNCTQKEAVSFATTVDRDG 269 Query: 102 IGECGVYAYEIAE-MKVNQVMNYSRQHQYPLQCIM 135 ++ E K V N SRQ + PL+ + Sbjct: 270 RKSVRFGDFQFCEQAKSVIVRNTSRQTK-PLRVQV 303 >gi|126696337|ref|YP_001091223.1| ATP-dependent Clp protease adaptor [Prochlorococcus marinus str. MIT 9301] gi|126543380|gb|ABO17622.1| Conserved hypothetical protein [Prochlorococcus marinus str. MIT 9301] Length = 95 Score = 35.6 bits (81), Expect = 2.2, Method: Composition-based stats. Identities = 14/56 (25%), Positives = 26/56 (46%), Gaps = 2/56 (3%) Query: 51 SSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFF-YKDHETAKCIMLKVHHQGIGEC 105 SK + P+ RV++++DN+ + V + L + A + +KV G E Sbjct: 13 KSKAKYPE-ARVIVLDDNFNTFQHVANCLLTIIPSMSEQRAWDLTIKVDKTGSAEV 67 >gi|78184628|ref|YP_377063.1| ATP-dependent Clp protease adaptor [Synechococcus sp. CC9902] gi|78168922|gb|ABB26019.1| conserved hypothetical protein [Synechococcus sp. CC9902] Length = 98 Score = 35.6 bits (81), Expect = 2.3, Method: Composition-based stats. Identities = 16/68 (23%), Positives = 30/68 (44%), Gaps = 2/68 (2%) Query: 48 VRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFF-YKDHETAKCIMLKVHHQGIGECG 106 R + R P+ +V++++D+ + V+ L+ D E A + ++ QG E Sbjct: 13 ERQKTTQRYPE-AKVIVLDDDVNTFQHVVDCLRKIIPGMDEEKAWGLAHRIDGQGSAEVW 71 Query: 107 VYAYEIAE 114 E AE Sbjct: 72 RGPLEQAE 79 >gi|332179678|gb|AEE15367.1| nitroreductase [Thermodesulfobium narugense DSM 14796] Length = 186 Score = 35.6 bits (81), Expect = 2.3, Method: Composition-based stats. Identities = 22/92 (23%), Positives = 39/92 (42%), Gaps = 14/92 (15%) Query: 40 FDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHE---------TA 90 DN V +K +V + Y+ +L D+Y + VL + K + A Sbjct: 60 SDNSKRFLVENMNKFKVLEKYKSMLEKDDYNIF-YNAPVLITIYAKSYGLYPKEDCALAA 118 Query: 91 KCIMLKVHHQGIGECGV-YAY---EIAEMKVN 118 + +ML+ H G+G C + +A ++ E K Sbjct: 119 QNLMLEAHAIGLGTCWIGFAREYMDLEETKAK 150 >gi|123968534|ref|YP_001009392.1| ATP-dependent Clp protease adaptor [Prochlorococcus marinus str. AS9601] gi|123198644|gb|ABM70285.1| Hypothetical protein A9601_10011 [Prochlorococcus marinus str. AS9601] Length = 95 Score = 35.6 bits (81), Expect = 2.5, Method: Composition-based stats. Identities = 14/56 (25%), Positives = 26/56 (46%), Gaps = 2/56 (3%) Query: 51 SSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFF-YKDHETAKCIMLKVHHQGIGEC 105 SK + P+ RV++++DN+ + V + L + A + +KV G E Sbjct: 13 KSKAKYPE-ARVIVLDDNFNTFQHVANCLLTIIPSMSEQRAWDLTIKVDKTGSAEV 67 >gi|170582638|ref|XP_001896220.1| Zinc finger in N-recognin family protein [Brugia malayi] gi|158596620|gb|EDP34934.1| Zinc finger in N-recognin family protein [Brugia malayi] Length = 1716 Score = 35.6 bits (81), Expect = 2.6, Method: Composition-based stats. Identities = 11/48 (22%), Positives = 20/48 (41%) Query: 58 KLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGEC 105 LY+ +L+ND + VI L + +H A + + +G Sbjct: 223 PLYQTILLNDETHTFDSVIRALNLSIHCNHPQALQLATVIDREGRASV 270 >gi|152996587|ref|YP_001341422.1| amino acid adenylation domain-containing protein [Marinomonas sp. MWYL1] gi|150837511|gb|ABR71487.1| amino acid adenylation domain [Marinomonas sp. MWYL1] Length = 3114 Score = 35.6 bits (81), Expect = 2.6, Method: Composition-based stats. Identities = 13/50 (26%), Positives = 27/50 (54%) Query: 29 DSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHV 78 +S++ + EF LD E+ + P L+R++++N + + E V+ V Sbjct: 2124 NSKIEIEQEKEFSKLLDIELSRGIDIEEPGLFRIIVLNRDESSFELVVSV 2173 >gi|189499028|ref|YP_001958498.1| ATP-dependent Clp protease adaptor protein ClpS [Chlorobium phaeobacteroides BS1] gi|189494469|gb|ACE03017.1| ATP-dependent Clp protease adaptor protein ClpS [Chlorobium phaeobacteroides BS1] Length = 101 Score = 35.6 bits (81), Expect = 2.6, Method: Composition-based stats. Identities = 12/46 (26%), Positives = 18/46 (39%) Query: 60 YRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGEC 105 YRV+L ND + VI + A+ +VH +G Sbjct: 29 YRVVLFNDEEHTFDEVILQIIKAIQCSRSKAEKHTWEVHTKGRSIV 74 >gi|302673572|ref|XP_003026472.1| hypothetical protein SCHCODRAFT_79680 [Schizophyllum commune H4-8] gi|300100155|gb|EFI91569.1| hypothetical protein SCHCODRAFT_79680 [Schizophyllum commune H4-8] Length = 1811 Score = 35.2 bits (80), Expect = 2.8, Method: Composition-based stats. Identities = 15/92 (16%), Positives = 34/92 (36%), Gaps = 7/92 (7%) Query: 29 DSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHE 88 D + + + L + + ++ ++L ND+ + V VL++ + E Sbjct: 229 DYSPEEPSVPANEAELCVQPSADPMTK--DVFSIVLWNDDKHSYDEVAKVLRDLLGRSRE 286 Query: 89 TAKCIMLKVHHQGIGECGVYAY-----EIAEM 115 A I+ + G + + EIA+ Sbjct: 287 EASEILRNMEENGREVIEMNSNATRMLEIAQT 318 >gi|260434286|ref|ZP_05788256.1| ATP-dependent Clp protease adaptor protein ClpS [Synechococcus sp. WH 8109] gi|260412160|gb|EEX05456.1| ATP-dependent Clp protease adaptor protein ClpS [Synechococcus sp. WH 8109] Length = 98 Score = 35.2 bits (80), Expect = 3.0, Method: Composition-based stats. Identities = 11/62 (17%), Positives = 24/62 (38%), Gaps = 1/62 (1%) Query: 54 VRVPKLYRVLLVNDNYTPMEFVIHVLQNFF-YKDHETAKCIMLKVHHQGIGECGVYAYEI 112 + RV++++D+ + V+ L+ + A + ++ G E E Sbjct: 18 TQRYPQARVIVLDDDVNTFQHVVDCLRKIIPGMSEDNAWNLANRIDGHGAAEVWCGPLEQ 77 Query: 113 AE 114 AE Sbjct: 78 AE 79 >gi|226954272|ref|ZP_03824736.1| hypothetical protein HMPREF0023_3102 [Acinetobacter sp. ATCC 27244] gi|294650476|ref|ZP_06727835.1| conserved hypothetical protein [Acinetobacter haemolyticus ATCC 19194] gi|226835000|gb|EEH67383.1| hypothetical protein HMPREF0023_3102 [Acinetobacter sp. ATCC 27244] gi|292823619|gb|EFF82463.1| conserved hypothetical protein [Acinetobacter haemolyticus ATCC 19194] Length = 40 Score = 35.2 bits (80), Expect = 3.0, Method: Composition-based stats. Identities = 11/35 (31%), Positives = 18/35 (51%) Query: 74 FVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVY 108 FVI +LQ +F + + +ML V ++ VY Sbjct: 6 FVIEILQQYFVLNLDQYAQLMLTVDYEAKRFINVY 40 >gi|312078026|ref|XP_003141559.1| hypothetical protein LOAG_05973 [Loa loa] gi|307763278|gb|EFO22512.1| hypothetical protein LOAG_05973 [Loa loa] Length = 1011 Score = 35.2 bits (80), Expect = 3.4, Method: Composition-based stats. Identities = 10/48 (20%), Positives = 19/48 (39%) Query: 58 KLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGEC 105 LY+ +L+ND + VI L + + A + + +G Sbjct: 223 PLYQTILLNDETHTFDSVIRALNLSIHCNQLQAMQLATVIDREGRASV 270 >gi|317488900|ref|ZP_07947430.1| CoA-transferase family III [Eggerthella sp. 1_3_56FAA] gi|316911974|gb|EFV33553.1| CoA-transferase family III [Eggerthella sp. 1_3_56FAA] Length = 413 Score = 34.8 bits (79), Expect = 3.8, Method: Composition-based stats. Identities = 12/39 (30%), Positives = 20/39 (51%), Gaps = 4/39 (10%) Query: 77 HVLQNFFY-KDHETAKCIMLKVHHQGIGECGVYAYEIAE 114 ++ FF E A+ +ML+ G+ +Y YE+AE Sbjct: 297 EAMEAFFGSHTAEEAERLMLEA---GVPCSRIYTYEMAE 332 >gi|257792612|ref|YP_003183218.1| L-carnitine dehydratase/bile acid-inducible protein F [Eggerthella lenta DSM 2243] gi|325832695|ref|ZP_08165458.1| putative bile acid-CoA hydrolase [Eggerthella sp. HGA1] gi|257476509|gb|ACV56829.1| L-carnitine dehydratase/bile acid-inducible protein F [Eggerthella lenta DSM 2243] gi|325485834|gb|EGC88295.1| putative bile acid-CoA hydrolase [Eggerthella sp. HGA1] Length = 413 Score = 34.8 bits (79), Expect = 3.8, Method: Composition-based stats. Identities = 12/39 (30%), Positives = 20/39 (51%), Gaps = 4/39 (10%) Query: 77 HVLQNFFY-KDHETAKCIMLKVHHQGIGECGVYAYEIAE 114 ++ FF E A+ +ML+ G+ +Y YE+AE Sbjct: 297 EAMEAFFGSHTAEEAERLMLEA---GVPCSRIYTYEMAE 332 >gi|193211717|ref|YP_001997670.1| ATP-dependent Clp protease adaptor protein ClpS [Chlorobaculum parvum NCIB 8327] gi|193085194|gb|ACF10470.1| ATP-dependent Clp protease adaptor protein ClpS [Chlorobaculum parvum NCIB 8327] Length = 111 Score = 34.8 bits (79), Expect = 3.9, Method: Composition-based stats. Identities = 16/84 (19%), Positives = 28/84 (33%), Gaps = 5/84 (5%) Query: 27 MADSRMNKK--GIAEFDNCLDSEVRFSS---KVRVPKLYRVLLVNDNYTPMEFVIHVLQN 81 M D +N + D + R + +RV+L ND+ + VI + Sbjct: 1 MKDYSLNASPMDMIRLDAGNTPDTRTEELVADIDTLDAWRVVLFNDDEHTFDEVIFQIIK 60 Query: 82 FFYKDHETAKCIMLKVHHQGIGEC 105 A+ +VH +G Sbjct: 61 AVRCPRAIAEKKTWEVHTKGRSIV 84 >gi|156544772|ref|XP_001606200.1| PREDICTED: similar to ubiquitin ligase E3 alpha [Nasonia vitripennis] Length = 1812 Score = 34.8 bits (79), Expect = 4.1, Method: Composition-based stats. Identities = 21/107 (19%), Positives = 37/107 (34%), Gaps = 3/107 (2%) Query: 32 MNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAK 91 M D C+ ++ S + Y +L ND + VI L A Sbjct: 220 MEHSPSLPNDLCIKNDEDSVSLLASNDTYCTVLFNDETHTFDQVIITLTRVIKCSQRDAI 279 Query: 92 CIMLKVHHQGIGE--CGVYAYEIAEMKVNQVMNYSRQHQYPLQCIME 136 + + +G C + + E+K SR + PL+ ++E Sbjct: 280 EYVTNIDREGRAVVKCSGFQH-CNELKSEIEKFTSRHNSRPLKVLVE 325 >gi|116070493|ref|ZP_01467762.1| ATP-dependent Clp protease adaptor protein ClpS [Synechococcus sp. BL107] gi|116065898|gb|EAU71655.1| ATP-dependent Clp protease adaptor protein ClpS [Synechococcus sp. BL107] Length = 98 Score = 34.8 bits (79), Expect = 4.5, Method: Composition-based stats. Identities = 14/68 (20%), Positives = 30/68 (44%), Gaps = 2/68 (2%) Query: 48 VRFSSKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFF-YKDHETAKCIMLKVHHQGIGECG 106 R + R P+ +V++++D+ + V+ L+ D + A + ++ +G E Sbjct: 13 ERQKTTQRYPE-AKVIVLDDDVNTFQHVVDCLRKIIPGMDEDKAWGLAHRIDGEGSAEVW 71 Query: 107 VYAYEIAE 114 E AE Sbjct: 72 RGPLEQAE 79 >gi|313122883|ref|YP_004033142.1| sensor protein [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|312279446|gb|ADQ60165.1| Sensor protein [Lactobacillus delbrueckii subsp. bulgaricus ND02] Length = 635 Score = 34.8 bits (79), Expect = 4.5, Method: Composition-based stats. Identities = 14/71 (19%), Positives = 32/71 (45%), Gaps = 1/71 (1%) Query: 5 DDGSMYHRVKRDGILALMSFIFMADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLL 64 ++ S R + D +L+ M+ +A R I +V+ ++ P + +VL Sbjct: 269 NEQSESERRRLDSVLSHMTDGVIATDRHGNVSIMNQMAQDFLDVKAEDAIKKP-ISQVLG 327 Query: 65 VNDNYTPMEFV 75 + ++YT + + Sbjct: 328 LGEDYTSQDLI 338 >gi|300811608|ref|ZP_07092088.1| PAS domain S-box protein [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|300497403|gb|EFK32445.1| PAS domain S-box protein [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] Length = 635 Score = 34.8 bits (79), Expect = 4.5, Method: Composition-based stats. Identities = 14/71 (19%), Positives = 32/71 (45%), Gaps = 1/71 (1%) Query: 5 DDGSMYHRVKRDGILALMSFIFMADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLL 64 ++ S R + D +L+ M+ +A R I +V+ ++ P + +VL Sbjct: 269 NEQSESERRRLDSVLSHMTDGVIATDRHGNVSIMNQMAQDFLDVKAEDAIKKP-ISQVLG 327 Query: 65 VNDNYTPMEFV 75 + ++YT + + Sbjct: 328 LGEDYTSQDLI 338 >gi|194769816|ref|XP_001966997.1| GF21816 [Drosophila ananassae] gi|190622792|gb|EDV38316.1| GF21816 [Drosophila ananassae] Length = 1820 Score = 34.4 bits (78), Expect = 4.6, Method: Composition-based stats. Identities = 12/55 (21%), Positives = 20/55 (36%) Query: 58 KLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEI 112 Y +L ND + VI L H+ A I+ + +G ++I Sbjct: 233 PQYCTVLYNDESHTFDQVIQTLTKIAKCRHKDAMEIVAAIDREGRAVVKCDTFKI 287 >gi|325685238|gb|EGD27356.1| sensor histidine kinase VicK [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 631 Score = 34.4 bits (78), Expect = 4.7, Method: Composition-based stats. Identities = 14/71 (19%), Positives = 32/71 (45%), Gaps = 1/71 (1%) Query: 5 DDGSMYHRVKRDGILALMSFIFMADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLL 64 ++ S R + D +L+ M+ +A R I +V+ ++ P + +VL Sbjct: 265 NEQSESERRRLDSVLSHMTDGVIATDRHGNVSIMNQMAQDFLDVKAEDAIKKP-ISQVLG 323 Query: 65 VNDNYTPMEFV 75 + ++YT + + Sbjct: 324 LGEDYTSQDLI 334 >gi|104773346|ref|YP_618326.1| two-component system, sensor histidine kinase [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|103422427|emb|CAI96976.1| Two-component system, sensor histidine kinase [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] Length = 631 Score = 34.4 bits (78), Expect = 4.7, Method: Composition-based stats. Identities = 14/71 (19%), Positives = 32/71 (45%), Gaps = 1/71 (1%) Query: 5 DDGSMYHRVKRDGILALMSFIFMADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLL 64 ++ S R + D +L+ M+ +A R I +V+ ++ P + +VL Sbjct: 265 NEQSESERRRLDSVLSHMTDGVIATDRHGNVSIMNQMAQDFLDVKAEDAIKKP-ISQVLG 323 Query: 65 VNDNYTPMEFV 75 + ++YT + + Sbjct: 324 LGEDYTSQDLI 334 >gi|260811093|ref|XP_002600257.1| hypothetical protein BRAFLDRAFT_118269 [Branchiostoma floridae] gi|229285543|gb|EEN56269.1| hypothetical protein BRAFLDRAFT_118269 [Branchiostoma floridae] Length = 690 Score = 34.4 bits (78), Expect = 4.8, Method: Composition-based stats. Identities = 18/75 (24%), Positives = 32/75 (42%), Gaps = 4/75 (5%) Query: 19 LALMSFIFMADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYR-VLLVNDNYTPMEFVIH 77 + M +M+ +D+ + +R S +Y+ VLL + ++TP VI Sbjct: 555 MPDSPDSLMP-EKMSTSPYKAYDSSSNCVIRVSLSGESDNIYKSVLLTHQDHTPG--VIK 611 Query: 78 VLQNFFYKDHETAKC 92 L + F D E A+ Sbjct: 612 SLMSKFNLDAEEAEE 626 >gi|116513325|ref|YP_812231.1| Signal transduction histidine kinase [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|116092640|gb|ABJ57793.1| PAS/PAC sensor signal transduction histidine kinase [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] Length = 620 Score = 34.4 bits (78), Expect = 4.9, Method: Composition-based stats. Identities = 14/71 (19%), Positives = 32/71 (45%), Gaps = 1/71 (1%) Query: 5 DDGSMYHRVKRDGILALMSFIFMADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLL 64 ++ S R + D +L+ M+ +A R I +V+ ++ P + +VL Sbjct: 254 NEQSESERRRLDSVLSHMTDGVIATDRHGNVSIMNQMAQDFLDVKAEDAIKKP-ISQVLG 312 Query: 65 VNDNYTPMEFV 75 + ++YT + + Sbjct: 313 LGEDYTSQDLI 323 >gi|110598294|ref|ZP_01386569.1| ATP-dependent Clp protease adaptor protein ClpS [Chlorobium ferrooxidans DSM 13031] gi|110340102|gb|EAT58602.1| ATP-dependent Clp protease adaptor protein ClpS [Chlorobium ferrooxidans DSM 13031] Length = 105 Score = 34.4 bits (78), Expect = 5.1, Method: Composition-based stats. Identities = 14/70 (20%), Positives = 25/70 (35%), Gaps = 1/70 (1%) Query: 37 IAEFDNCLDSEVRFS-SKVRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIML 95 D+ +++ R + YRV+L ND + VI + A+ Sbjct: 9 WTASDSTPETKQREQLTGTDQLDAYRVVLFNDEEHSFDEVIDQIIKAIRCSRSKAERHTW 68 Query: 96 KVHHQGIGEC 105 +VH +G Sbjct: 69 EVHTRGRSIV 78 >gi|21675046|ref|NP_663111.1| hypothetical protein CT2237 [Chlorobium tepidum TLS] gi|21648283|gb|AAM73453.1| hypothetical protein CT2237 [Chlorobium tepidum TLS] Length = 99 Score = 34.4 bits (78), Expect = 5.5, Method: Composition-based stats. Identities = 11/46 (23%), Positives = 19/46 (41%) Query: 60 YRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGEC 105 +RV+L ND+ + VI + A+ +VH +G Sbjct: 27 WRVVLFNDDDHTFDEVIFQIIKAVRCTRSIAEKHTWEVHTRGRAIV 72 >gi|268560834|ref|XP_002646302.1| Hypothetical protein CBG12009 [Caenorhabditis briggsae] Length = 2023 Score = 34.4 bits (78), Expect = 5.8, Method: Composition-based stats. Identities = 17/72 (23%), Positives = 27/72 (37%), Gaps = 3/72 (4%) Query: 37 IAEFDNCLDSEVRFSSKVRVP---KLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCI 93 I D+ E K VP + + +L ND E VI VL+ + + + A + Sbjct: 196 ITHKDDLTLPEAFEEFKPEVPVDSQQFLTVLYNDETHTYESVIKVLELYIHCTKDQAMLV 255 Query: 94 MLKVHHQGIGEC 105 V +G Sbjct: 256 ATIVDREGRSAV 267 >gi|309360562|emb|CAP31056.2| hypothetical protein CBG_12009 [Caenorhabditis briggsae AF16] Length = 2072 Score = 34.4 bits (78), Expect = 5.8, Method: Composition-based stats. Identities = 17/72 (23%), Positives = 27/72 (37%), Gaps = 3/72 (4%) Query: 37 IAEFDNCLDSEVRFSSKVRVP---KLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCI 93 I D+ E K VP + + +L ND E VI VL+ + + + A + Sbjct: 212 ITHKDDLTLPEAFEEFKPEVPVDSQQFLTVLYNDETHTYESVIKVLELYIHCTKDQAMLV 271 Query: 94 MLKVHHQGIGEC 105 V +G Sbjct: 272 ATIVDREGRSAV 283 >gi|325124951|gb|ADY84281.1| Putative histidine kinase [Lactobacillus delbrueckii subsp. bulgaricus 2038] Length = 635 Score = 34.0 bits (77), Expect = 6.1, Method: Composition-based stats. Identities = 15/71 (21%), Positives = 32/71 (45%), Gaps = 1/71 (1%) Query: 5 DDGSMYHRVKRDGILALMSFIFMADSRMNKKGIAEFDNCLDSEVRFSSKVRVPKLYRVLL 64 ++ S R + D +L+ M+ +A R I +V+ V+ P + +VL Sbjct: 269 NEQSESERRRLDSVLSHMTDGVIATDRHGNVSIMNQMAQDFLDVKAEDAVKKP-ISQVLG 327 Query: 65 VNDNYTPMEFV 75 + ++YT + + Sbjct: 328 LGEDYTSQDLI 338 >gi|158289214|ref|XP_310967.4| AGAP000171-PA [Anopheles gambiae str. PEST] gi|157018947|gb|EAA06476.4| AGAP000171-PA [Anopheles gambiae str. PEST] Length = 1773 Score = 34.0 bits (77), Expect = 6.5, Method: Composition-based stats. Identities = 17/80 (21%), Positives = 31/80 (38%), Gaps = 9/80 (11%) Query: 63 LLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGECGVYAYEIA-------EM 115 +L ND E VI L + +H+TA + + +G ++E+ E Sbjct: 165 ILYNDETHTFEQVIQTLTSIVKCEHKTAIEYVTSIDREGRAVVKCASFEVCKKLKEDIEN 224 Query: 116 KVNQVMNYSRQHQYPLQCIM 135 K + +R PL+ + Sbjct: 225 KAMRSTLTTRAM--PLKVTV 242 >gi|133902360|ref|NP_491231.2| hypothetical protein C32E8.11 [Caenorhabditis elegans] gi|306526247|sp|P91133|UBR1_CAEEL RecName: Full=E3 ubiquitin-protein ligase ubr-1; AltName: Full=N-recognin-1; AltName: Full=Ubiquitin-protein ligase E3-alpha Length = 2058 Score = 34.0 bits (77), Expect = 7.1, Method: Composition-based stats. Identities = 12/52 (23%), Positives = 20/52 (38%) Query: 54 VRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGEC 105 + Y +L ND E VI VL+ + + + A + V +G Sbjct: 216 TNEAQQYLTVLYNDETHTYESVIKVLELYIHCTKDQAMLVATIVDREGRSAV 267 >gi|255031453|gb|AAB42328.2| Hypothetical protein C32E8.11 [Caenorhabditis elegans] Length = 2033 Score = 34.0 bits (77), Expect = 7.1, Method: Composition-based stats. Identities = 12/52 (23%), Positives = 20/52 (38%) Query: 54 VRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCIMLKVHHQGIGEC 105 + Y +L ND E VI VL+ + + + A + V +G Sbjct: 191 TNEAQQYLTVLYNDETHTYESVIKVLELYIHCTKDQAMLVATIVDREGRSAV 242 >gi|163846549|ref|YP_001634593.1| cytidylate kinase [Chloroflexus aurantiacus J-10-fl] gi|222524338|ref|YP_002568809.1| cytidylate kinase [Chloroflexus sp. Y-400-fl] gi|163667838|gb|ABY34204.1| cytidylate kinase [Chloroflexus aurantiacus J-10-fl] gi|222448217|gb|ACM52483.1| cytidylate kinase [Chloroflexus sp. Y-400-fl] Length = 237 Score = 33.6 bits (76), Expect = 8.8, Method: Composition-based stats. Identities = 17/40 (42%), Positives = 20/40 (50%) Query: 54 VRVPKLYRVLLVNDNYTPMEFVIHVLQNFFYKDHETAKCI 93 V P ++LVND TP E V VLQ F D A+ I Sbjct: 191 VAQPADDAIILVNDGLTPAEEVAWVLQQFANGDQPLAQEI 230 Database: nr Posted date: May 13, 2011 4:10 AM Number of letters in database: 999,999,932 Number of sequences in database: 2,987,209 Database: /data/usr2/db/fasta/nr.01 Posted date: May 13, 2011 4:17 AM Number of letters in database: 999,998,956 Number of sequences in database: 2,896,973 Database: /data/usr2/db/fasta/nr.02 Posted date: May 13, 2011 4:23 AM Number of letters in database: 999,999,979 Number of sequences in database: 2,907,862 Database: /data/usr2/db/fasta/nr.03 Posted date: May 13, 2011 4:29 AM Number of letters in database: 999,999,513 Number of sequences in database: 2,932,190 Database: /data/usr2/db/fasta/nr.04 Posted date: May 13, 2011 4:33 AM Number of letters in database: 792,586,372 Number of sequences in database: 2,260,650 Lambda K H 0.311 0.160 0.515 Lambda K H 0.267 0.0492 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 2,995,562,376 Number of Sequences: 13984884 Number of extensions: 146347120 Number of successful extensions: 330952 Number of sequences better than 10.0: 1231 Number of HSP's better than 10.0 without gapping: 1930 Number of HSP's successfully gapped in prelim test: 127 Number of HSP's that attempted gapping in prelim test: 328822 Number of HSP's gapped (non-prelim): 2067 length of query: 138 length of database: 4,792,584,752 effective HSP length: 103 effective length of query: 35 effective length of database: 3,352,141,700 effective search space: 117324959500 effective search space used: 117324959500 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (20.6 bits) S2: 76 (33.6 bits)