HHsearch alignment for GI: 254780166 and conserved domain: COG2939
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism].
Probab=95.22 E-value=0.021 Score=33.35 Aligned_cols=94 Identities=18% Similarity=0.150 Sum_probs=56.0
Q ss_pred CCCEEEEECCCCCCCHHHHHHHHHHH----------------HHHHCCCEEEEEC-CCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 98789999878888001221799999----------------9986898999964-765542222222222221222222
Q gi|254780166|r 25 DAPTILLIHGLASSVQTNWLFSGWIQ----------------LLCDQGFRVIAFD-NLGHGKSDKSYIENDYRLVFMAAD 87 (261)
Q Consensus 25 ~~~~vv~iHG~~~~~~~~~~~~~~~~----------------~l~~~g~~vi~~D-~~G~G~S~~~~~~~~~s~~~~~~d 87 (261)
T Consensus 100 ~rPvi~wlNGGPGcSS~~g~l~elGP~rI~~~~~P~~~~NP~SW~~~a-dLvFiDqPvGTGfS~a~~~e~~~d~~~~~~D 178 (498)
T COG2939 100 NRPVIFWLNGGPGCSSVTGLLGELGPKRIQSGTSPSYPDNPGSWLDFA-DLVFIDQPVGTGFSRALGDEKKKDFEGAGKD 178 (498)
T ss_pred CCCEEEEECCCCCHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCC-CEEEEECCCCCCCCCCCCCCCCCCHHCCCHH
T ss_conf 786699966889717655356633983630799999999942201477-5699716766674545542112231002112
Q ss_pred CCCCCCCC--------C-CCCCCCCCCCCCCCCHHHHHHHC
Q ss_conf 22222222--------2-22222234434443101333210
Q gi|254780166|r 88 AVSLLEHL--------G-ISKVHVMGYSMGARIACSMVLFY 119 (261)
Q Consensus 88 i~~~i~~l--------~-~~~~~liGhS~Gg~ia~~~a~~~ 119 (261)
T Consensus 179 ~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L 219 (498)
T COG2939 179 VYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHEL 219 (498)
T ss_pred HHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHH
T ss_conf 99999999999898765047606730452102568999999