HHsearch alignment for GI: 254780166 and conserved domain: PRK04940

Probab=97.99  E-value=2.9e-05  Score=50.36  Aligned_cols=175  Identities=15%  Similarity=0.254  Sum_probs=91.3

Q ss_pred             EEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             99998788880012217999999986898999964765542222222222221222222222222222222222344344
Q gi|254780166|r   29 ILLIHGLASSVQTNWLFSGWIQLLCDQGFRVIAFDNLGHGKSDKSYIENDYRLVFMAADAVSLLEHLGISKVHVMGYSMG  108 (261)
Q Consensus        29 vv~iHG~~~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~s~~~~~~di~~~i~~l~~~~~~liGhS~G  108 (261)
T Consensus         2 IlYlHGF~Sss~~~k~k~~q~-~fi~~dvr~i~~~-------t--~~P-~~d~~~ll~ev~k~i~~~~d~~~liiGssLG   70 (179)
T PRK04940          2 IIYLHGFDSTSPGNHEKVLQL-QFIDPDVRLISYS-------T--LHP-KHDMQHLLKEVDKMLQLSDDERPLICGVGLG   70 (179)
T ss_pred             EEEEECCCCCCCCCHHHHHHH-HHCCCCCCCCCCC-------C--CCC-CHHHHHHHHHHHHHHHHCCCCCCEEEECCCH
T ss_conf             799944678896329999999-7257565546678-------8--993-1209999999999998358788379954723


Q ss_pred             CCCHHHHHHHCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf             43101333210235652389628856331103569999998631111000011100000000347665413567776541
Q gi|254780166|r  109 ARIACSMVLFYPSYVRSVILGGVGSVLYDSDVVDWQSLIDSFLLPSIDEVQNPLGKKFRKFADLDPGNDLKALASCLSMI  188 (261)
Q Consensus       109 g~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  188 (261)
T Consensus        71 GyyA~~l~~~~~--~Ka-VliNPa--l~P~~~m--~~~i--------~~---p--eey---~di--------~~k~v~~f  119 (179)
T PRK04940         71 GYWAERIGFLCG--IRQ-VIFNPN--LFPEENM--EGKI--------DR---P--EEY---ADI--------ATKCVTNF  119 (179)
T ss_pred             HHHHHHHHHHCC--CCE-EEECCC--CCHHHHH--HHHH--------CC---C--CHH---HHH--------HHHHHHHH
T ss_conf             899999999829--867-998899--8804655--6550--------78---7--126---888--------88789998


Q ss_pred             CCCCCHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHCCCCEEEEE-CCCCCCCCCCCHHHHHHHHHHH
Q ss_conf             012200121003576069984788878807999996799799998-8887384348489999999998
Q gi|254780166|r  189 RKPFCQDDLYRIDVPVLIAVGSQDDLAGSPQELMSFIPSSQYLNI-CRRDHLLAVGDKQFKQGVVNFY  255 (261)
Q Consensus       189 ~~~~~~~~l~~i~~P~l~i~G~~D~~~~~~~~l~~~~p~~~~~~i-~~~gH~~~~e~p~~~~~i~~Fl  255 (261)
T Consensus       120 r~--------kn~~~~LvlL~~gDEVLD~~~-~a~~l~~~~~Ii~d~gg~H~F-~~~~~~L~~I~~F~  177 (179)
T PRK04940        120 RE--------KNRDRCLVILSRNDEVLDSQR-TAEELHPYYEIVWDEEQTHKF-KNISPHLQRIKAFK  177 (179)
T ss_pred             HH--------CCCCCEEEEEECCCHHHHHHH-HHHHHCCCCEEEECCCCCCCC-CCHHHHHHHHHHHH
T ss_conf             61--------283038999855626660999-999845463588628998676-51999989999875