HHsearch alignment for GI: 254780166 and conserved domain: PRK05077
>PRK05077 frsA fermentation/respiration switch protein; Reviewed.
Probab=99.32 E-value=6.9e-11 Score=83.81 Aligned_cols=232 Identities=19% Similarity=0.229 Sum_probs=132.7
Q ss_pred EEECCCCEE-EEEEECCCCCC-EEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 993499499-99996489987-8999987888800122179999999868989999647655422222222222212222
Q gi|254780166|r 8 FRSWRKYQF-AFYDVGDKDAP-TILLIHGLASSVQTNWLFSGWIQLLCDQGFRVIAFDNLGHGKSDKSYIENDYRLVFMA 85 (261)
Q Consensus 8 ~~~~dG~~l-~y~~~g~~~~~-~vv~iHG~~~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~s~~~~~ 85 (261)
T Consensus 173 f~~~~G~~i~gfLHLP~~~~p~PtViv~GgLDsLQ~-D~~rLF~dylaP~giAMLTlDMPSvG~Ss~w~LtqDsS~LH-- 249 (414)
T PRK05077 173 FPVPGGKPITGFLHLPKGDGPFPTVLMCGGLDSLQT-DYYRLFRDYLAPRGIAMLTIDMPSVGFSSKWKLTQDSSLLH-- 249 (414)
T ss_pred EEECCCCEEEEEEECCCCCCCCCEEEEECCHHHHHH-HHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHH--
T ss_conf 872699657899846999998875999567247788-89999998526467337970378776536354443067999--
Q ss_pred CCCCCCCCCC---CCCCCCCCCCCCCCCCHHHHHHHCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHH
Q ss_conf 2222222222---2222222344344431013332102356523896288563311035699999986311110000111
Q gi|254780166|r 86 ADAVSLLEHL---GISKVHVMGYSMGARIACSMVLFYPSYVRSVILGGVGSVLYDSDVVDWQSLIDSFLLPSIDEVQNPL 162 (261)
Q Consensus 86 ~di~~~i~~l---~~~~~~liGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (261)
T Consensus 250 QaVL~~L~~vPWVDh~Rv~~~GfRFG~NvAvRLayLEp~rlKavv~lG~~VH~~~~~~----~~~~~~P~MylDvlASRL 325 (414)
T PRK05077 250 QAVLNALPNVPWVDHTRVAAFGFRFGANVAVRLAYLEPPRLKAVACLGPVVHALLSDP----DRQQQVPEMYLDVLASRL 325 (414)
T ss_pred HHHHHHCCCCCCCCCCEEEEEEEEECHHHHHHHHHHCCCCEEEEEEECHHHHHHHCCH----HHHHHCCHHHHHHHHHHH
T ss_conf 9999855689863230356776420206999998626200126887262888883688----888768789999999874
Q ss_pred HHHHCCCCCCCCCCCHHHHHHHHHH--HCCCCCHHHHHCCCCCEEEEEECCCCCCCCHH-HH-HHHCCCCEEEEECCCCC
Q ss_conf 0000000034766541356777654--10122001210035760699847888788079-99-99679979999888873
Q gi|254780166|r 163 GKKFRKFADLDPGNDLKALASCLSM--IRKPFCQDDLYRIDVPVLIAVGSQDDLAGSPQ-EL-MSFIPSSQYLNICRRDH 238 (261)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~i~~P~l~i~G~~D~~~~~~~-~l-~~~~p~~~~~~i~~~gH 238 (261)
T Consensus 326 g~~---------~~~~~~L~~~l~~~SLK~QGlLg--Rr~~vPmLa~~~k~Dp~sP~~d~~Lia~sS~~Gk~~~i~~~p- 393 (414)
T PRK05077 326 GMH---------DASDEALRVELNRYSLKVQGLLG--RRCPTPMLSGYWKNDPFSPEEDSRLIASSSADGKLLEIPFKP- 393 (414)
T ss_pred CCC---------CCCHHHHHHHHHHCCHHHHCCCC--CCCCCCEEEECCCCCCCCCHHHHHHHHHHCCCCCEEECCCCC-
T ss_conf 643---------38889998776330076502256--878976244025899979868899999744588456447863-
Q ss_pred CCCCCC-HHHHHHHHHHHHHHCC
Q ss_conf 843484-8999999999875168
Q gi|254780166|r 239 LLAVGD-KQFKQGVVNFYANELR 260 (261)
Q Consensus 239 ~~~~e~-p~~~~~i~~Fl~~~~~ 260 (261)
T Consensus 394 --v~~~~~~aL~~~~~Wl~~~l~ 414 (414)
T PRK05077 394 --VYRNFDKALQEIIDWLEDKLC 414 (414)
T ss_pred --HHHHHHHHHHHHHHHHHHHCC
T ss_conf --466799999999999986439