HHsearch alignment for GI: 254780166 and conserved domain: TIGR01849
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular; InterPro: IPR010915 This entry represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting..
Probab=98.17 E-value=2.9e-06 Score=56.30 Aligned_cols=227 Identities=19% Similarity=0.156 Sum_probs=132.2
Q ss_pred CCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 87899998788880012217999999986898999964765542222222222221222222222222222222222344
Q gi|254780166|r 26 APTILLIHGLASSVQTNWLFSGWIQLLCDQGFRVIAFDNLGHGKSDKSYIENDYRLVFMAADAVSLLEHLGISKVHVMGY 105 (261)
Q Consensus 26 ~~~vv~iHG~~~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~s~~~~~~di~~~i~~l~~~~~~liGh 105 (261)
T Consensus 109 dp~vLiVAPmSGHy--ATLLR~TV~aLLP~-~dVYiTDW~~A--R~VPl~aG~FD~~DYIdY~ief~~~lGp~r~hV~aV 183 (414)
T TIGR01849 109 DPKVLIVAPMSGHY--ATLLRSTVEALLPD-HDVYITDWVDA--RMVPLEAGKFDLEDYIDYLIEFLRFLGPDRIHVVAV 183 (414)
T ss_pred CCCEEEECCCHHHH--HHHHHHHHHHHCCC-CCEEEECCCCC--CCCCHHHCCCCHHHHHHHHHHHHHHHCCCCCCEEEE
T ss_conf 87127856741256--66556789985789-96788631401--603050086433568999999999718897637887
Q ss_pred CCCCCCHHHHH-----HHCCCCCCCEEEECCCCCCCCCCHHHHH----HHHHHHHCCCCCHH------------------
Q ss_conf 34443101333-----2102356523896288563311035699----99998631111000------------------
Q gi|254780166|r 106 SMGARIACSMV-----LFYPSYVRSVILGGVGSVLYDSDVVDWQ----SLIDSFLLPSIDEV------------------ 158 (261)
Q Consensus 106 S~Gg~ia~~~a-----~~~p~~v~~lvl~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~------------------ 158 (261)
T Consensus 184 CQP~vPvLAA~aLmae~~~P~~P~sm~lmGGPIDaR~~PT~VN~lA~~~~~eWF~~n~i~~VP~~YpG~GR~VYPGFlQL 263 (414)
T TIGR01849 184 CQPAVPVLAAVALMAENEEPAQPRSMTLMGGPIDARASPTVVNELAKEKPIEWFQENLIMRVPFPYPGAGRKVYPGFLQL 263 (414)
T ss_pred ECCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCHHHHHHHCCCCHHHHHHCCEEECCCCCCCCCCCCCCHHHHH
T ss_conf 46845799999998745788888405762777664555213443001267278853876408426777885437138888
Q ss_pred H-------HHHHHH------------------HCCCCCCCCCC---CHHHHHHHHHH-HCCCCC----------HHHHHC
Q ss_conf 0-------111000------------------00000347665---41356777654-101220----------012100
Q gi|254780166|r 159 Q-------NPLGKK------------------FRKFADLDPGN---DLKALASCLSM-IRKPFC----------QDDLYR 199 (261)
Q Consensus 159 ~-------~~~~~~------------------~~~~~~~~~~~---~~~~~~~~~~~-~~~~~~----------~~~l~~ 199 (261)
T Consensus 264 agF~SmN~dRH~~aH~~~~~~LvkgDg~~Ad~H~~FYDEYLaVmDmtAEFYLqTi~~VF~q~~Lp~G~~~~~G~rVd~~~ 343 (414)
T TIGR01849 264 AGFISMNLDRHVKAHKDFFAHLVKGDGDEADKHRKFYDEYLAVMDMTAEFYLQTIDVVFQQFLLPKGKFIVEGKRVDPKA 343 (414)
T ss_pred HHHHHHCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCEEECCEEECHHH
T ss_conf 86884065667999999999862375257788876312453205450344554899998653144771678874316434
Q ss_pred CC-CCEEEEEECCCCCCCCH-----HHHHHHCCCC--EEEEECCCCCCCCCCCH----HHHHHHHHHHHH
Q ss_conf 35-76069984788878807-----9999967997--99998888738434848----999999999875
Q gi|254780166|r 200 ID-VPVLIAVGSQDDLAGSP-----QELMSFIPSS--QYLNICRRDHLLAVGDK----QFKQGVVNFYAN 257 (261)
Q Consensus 200 i~-~P~l~i~G~~D~~~~~~-----~~l~~~~p~~--~~~~i~~~gH~~~~e~p----~~~~~i~~Fl~~ 257 (261)
T Consensus 344 It~~ALltvEGEnDDIsg~GQT~AA~~LCtgIpe~~k~~~~~pgvGHYGvF~GsrfR~~I~P~v~~FI~~ 413 (414)
T TIGR01849 344 ITKVALLTVEGENDDISGLGQTKAALKLCTGIPEDMKRHYLQPGVGHYGVFSGSRFREEIYPRVREFIRR 413 (414)
T ss_pred CCEEEEEEECCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHCCCCCCEEEEECCCCCCCCCCCHHHHHHHC
T ss_conf 1345434432652233740378999984379876887751568873135436840011366068998741