>pfam03096 Ndr Ndr family. This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted. The precise molecular and cellular function of members of this family is still unknown. Yet, they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (su

Probab=100.00 E-value=1.2e-32 Score=213.27 Aligned_cols=239 Identities=20% Similarity=0.242 Sum_probs=164.4 Q ss_pred ECCCCEEEEEEECCCC--CCEEEEECCCCCCCHHHHHHHH-----HHHHHHHCCCEEEEECCCCCCCCCCCCCC-CCC-C Q ss_conf 3499499999964899--8789999878888001221799-----99999868989999647655422222222-222-2 Q gi|254780166|r 10 SWRKYQFAFYDVGDKD--APTILLIHGLASSVQTNWLFSG-----WIQLLCDQGFRVIAFDNLGHGKSDKSYIE-NDY-R 80 (261) Q Consensus 10 ~~dG~~l~y~~~g~~~--~~~vv~iHG~~~~~~~~~~~~~-----~~~~l~~~g~~vi~~D~~G~G~S~~~~~~-~~~-s 80 (261) T Consensus 6 t~~G-~~~v~v~g~~~~~kp~~~t~hdlg~n~~s--~f~~~f~~~~~~~l~~-~f~v~~iD~pGh~~ga~~~~~~~~~ps 81 (285) T pfam03096 6 TPCG-SVHVTVYGDPEGKKPPILTYHDLGLNHKS--CFQGLFNSESMQEILE-NFCIYHVDAPGQEDGAASFPGGYPYPS 81 (285) T ss_pred CCCC-EEEEEEEECCCCCCCEEEEECCCCCCHHH--HHHHHHCCHHHHHHHH-CCEEEEECCCCCCCCCCCCCCCCCCCC T ss_conf 7985-18999980678998879985776546287--7565306576899874-267999628987789998998888878 Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCEEEECCCCCCCCCCHHHHHH--HHH-HHHCCCC-C Q ss_conf 12222222222222222222223443444310133321023565238962885633110356999--999-8631111-0 Q gi|254780166|r 81 LVFMAADAVSLLEHLGISKVHVMGYSMGARIACSMVLFYPSYVRSVILGGVGSVLYDSDVVDWQS--LID-SFLLPSI-D 156 (261) Q Consensus 81 ~~~~~~di~~~i~~l~~~~~~liGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~--~~~-~~~~~~~-~ 156 (261) T Consensus 82 ~~~la~~l~~vld~l~i~~~~~~G~s~G~~i~~~fA~~~p~rv~~LvLi~~~~~~--~~w~Ew~~~k~~~~~L~~~Gmt~ 159 (285) T pfam03096 82 MDDLADMLPVVLDHFRLKSVIGMGVGAGAYILARFALKHPERVEGLVLINPTPKA--AGWIEWFYNKLSSKLLYYYGMTD 159 (285) T ss_pred HHHHHHHHHHHHHHCCCCEEEEEEECHHHHHHHHHHHHCHHHEEEEEEECCCCCC--CCHHHHHHHHHHHHHHHHCCCHH T ss_conf 9999999999999719876999843678899999998696761057996578777--67789999999887776546437 Q ss_pred HHHHHH----------------HHHHCCCCCCCCCCCHHHHHHHHHH-HCCCCCHHHHH--CCCCCEEEEEECCCCCCCC Q ss_conf 000111----------------0000000034766541356777654-10122001210--0357606998478887880 Q gi|254780166|r 157 EVQNPL----------------GKKFRKFADLDPGNDLKALASCLSM-IRKPFCQDDLY--RIDVPVLIAVGSQDDLAGS 217 (261) Q Consensus 157 ~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~--~i~~P~l~i~G~~D~~~~~ 217 (261) T Consensus 160 ~~~d~ll~h~Fg~~~~~~n~div~~~R~~l~~--~~n~~nl~~fl~a~~~R~dl~~~~~~~~~~cpvLlv~Gd~sp~~~~ 237 (285) T pfam03096 160 SAKDYLLAHYFGKEELSNNSDIVQEYRKFLKE--RLNPKNLQLYLEAYNSRRDLTIERPGLEEVCPVLLVVGDNSPHVDA 237 (285) T ss_pred HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH--CCCHHHHHHHHHHHHCCCCCHHHHCCCCCCCCEEEEECCCCCCHHH T ss_conf 89999998765766445887999999999985--4498999999999847776602204468776669996378820778 Q ss_pred HHHHHHHC--CCCEEEEECCCCCCCCCCCHH-HHHHHHHHHH Q ss_conf 79999967--997999988887384348489-9999999987 Q gi|254780166|r 218 PQELMSFI--PSSQYLNICRRDHLLAVGDKQ-FKQGVVNFYA 256 (261) Q Consensus 218 ~~~l~~~~--p~~~~~~i~~~gH~~~~e~p~-~~~~i~~Fl~ 256 (261) T Consensus 238 ~v~~~~~ld~~~stllki~dcG~mv~~EqP~k~~e~i~~FLq 279 (285) T pfam03096 238 VVECNTKLDPTKTTLLKVADCGGLVQQEQPGKLTESFKLFLQ 279 (285) T ss_pred HHHHHHHCCCCCCEEEEECCCCCCHHHCCCHHHHHHHHHHHH T ss_conf 999986028432259995677886110380999999999985

HHsearch alignment for GI: 254780166 and conserved domain: pfam03096