HHsearch alignment for GI: 254780168 and conserved domain: COG0445
>COG0445 GidA Flavin-dependent tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Cell cycle control, cell division, chromosome partitioning].
Probab=96.73 E-value=0.0027 Score=41.08 Aligned_cols=139 Identities=14% Similarity=0.132 Sum_probs=73.3
Q ss_pred CEECCHHHHHHHHHHHHHCCCEEEEEECCCC-CCCC-----CCEEEECHHHHHHHHHCC-CHHHHHHCCCCCCCEEEEEC
Q ss_conf 3877538999999999977985999956876-5557-----713667888999999889-94789862688430699978
Q gi|254780168|r 1 MIIGAGISGLTLAASLGHRGIQSCVLEKKDQ-LSDS-----GFGIQISPNASRILKRIG-ILDQLEDIWIEPEDFVFRSG 73 (380)
Q Consensus 1 iIvGaG~aGl~~A~~L~~~G~~v~i~Er~~~-~~~~-----g~gi~l~p~~~~~L~~lG-i~~~~~~~~~~~~~~~~~~~ 73 (380)
T Consensus 8 IVIGgGHAG~EAA~AaARmG~ktlLlT~~~dtig~msCNPaIGG~~-KG~lvrEIDALGG~Mg~~~----D~~~IQ~r~L 82 (621)
T COG0445 8 IVIGGGHAGVEAALAAARMGAKTLLLTLNLDTIGEMSCNPAIGGPG-KGHLVREIDALGGLMGKAA----DKAGIQFRML 82 (621)
T ss_pred EEECCCCCCHHHHHHHHCCCCEEEEEECCCCCEEECCCCCCCCCCC-CCEEEEEEHHCCCHHHHHH----HHCCCCHHHC
T ss_conf 9989984204777766436980799973777446503564457735-5326775241245577766----6507865333
Q ss_pred CCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHCCCEEEEEEECC----CC---CCCCCCCCCCCEEEEEEE
Q ss_conf 85443334554323444478247862000134788997320687256421012----34---432112345310356899
Q gi|254780168|r 74 STLKELSRFSCKNYSRNNWGGIYGVVKRHTLQKILLNHIQTQPLARLHLSTHI----TH---PDCTQISKINNQKPDLLV 146 (380)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~~~~~~~~~~v----~~---~~~~~~~~~~~~~adlvI 146 (380)
T Consensus 83 N~sKG-------PAV---r-a~RaQaDk~~Y~~~mk~~le~~~NL~l~q~~v~dli~e~~~~v~GV~t~~G~~~~a~aVV 151 (621)
T COG0445 83 NSSKG-------PAV---R-APRAQADKWLYRRAMKNELENQPNLHLLQGEVEDLIVEEGQRVVGVVTADGPEFHAKAVV 151 (621)
T ss_pred CCCCC-------CHH---C-CHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHCCCCEEEEEEECCCCEEECCEEE
T ss_conf 67776-------210---4-506544289999999999854999552476667871337976899992787851068799
Q ss_pred EECCCCCCC
Q ss_conf 743676631
Q gi|254780168|r 147 GADGLNSNI 155 (380)
Q Consensus 147 gADG~~S~v 155 (380)
T Consensus 152 lTTGTFL~G 160 (621)
T COG0445 152 LTTGTFLRG 160 (621)
T ss_pred EEECCCCCC
T ss_conf 963344362