HHsearch alignment for GI: 254780168 and conserved domain: COG0654
>COG0654 UbiH 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme metabolism / Energy production and conversion].
Probab=100.00 E-value=0 Score=378.40 Aligned_cols=353 Identities=30% Similarity=0.420 Sum_probs=262.4
Q ss_pred CEECCHHHHHHHHHHHHHCCCEEEEEECC-CCCCCCCCEEEECHHHHHHHHHCCCHHHHHHCCCCCCCEEEEECCCCCCC
Q ss_conf 38775389999999999779859999568-76555771366788899999988994789862688430699978854433
Q gi|254780168|r 1 MIIGAGISGLTLAASLGHRGIQSCVLEKK-DQLSDSGFGIQISPNASRILKRIGILDQLEDIWIEPEDFVFRSGSTLKEL 79 (380)
Q Consensus 1 iIvGaG~aGl~~A~~L~~~G~~v~i~Er~-~~~~~~g~gi~l~p~~~~~L~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (380)
T Consensus 6 ~IvGaG~aGl~lA~~L~~~G~~V~liE~~~~~~~~~~r~~~l~~~~~~~L~~lG~~~~i~~~~~~~~~~~~~~~~~~-~~ 84 (387)
T COG0654 6 AIVGAGPAGLALALALARAGLDVTLLERAPRELLERGRGIALSPNALRALERLGLWDRLEALGVPPLHVMVVDDGGR-RL 84 (387)
T ss_pred EEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEEECHHHHHHHHHCCCHHHHHHCCCCCEEEEEEECCCC-EE
T ss_conf 99997899999999998289968999077611355755999898999999984990777615788603799965996-38
Q ss_pred CCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHCCCEEEEEEECCCCCC------CCCCC-CCCCEEEEEEEEECCCC
Q ss_conf 345543234444782478620001347889973206872564210123443------21123-45310356899743676
Q gi|254780168|r 80 SRFSCKNYSRNNWGGIYGVVKRHTLQKILLNHIQTQPLARLHLSTHITHPD------CTQIS-KINNQKPDLLVGADGLN 152 (380)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~~~~~~~~~~v~~~~------~~~~~-~~~~~~adlvIgADG~~ 152 (380)
T Consensus 85 ~~~~~~~~~~---~~~~~~~~~~~l~~~L~~~~~~~~~v~l~~~~~v~~~~~~~~~v~v~l~~dG~~~~a~llVgADG~~ 161 (387)
T COG0654 85 LIFDAAELGR---GALGYVVPRSDLLNALLEAARALPNVTLRFGAEVEAVEQDGDGVTVTLSFDGETLDADLLVGADGAN 161 (387)
T ss_pred EEECHHHCCC---CCCEEEEEHHHHHHHHHHHHHHCCCEEEEECCEEEEEEECCCEEEEEEECCCEEEECCEEEECCCCC
T ss_conf 9815221687---7627998889999999999871898299957779998853973799990399199759999889987
Q ss_pred CCCHHHCCCCC-CC-CCCCEEEEEECCCCCCCCCCCCCCEEEEECCCCEEEEEEECCCCEEEEEEEECCCCCCCCCCCCC
Q ss_conf 63121128533-44-31101578603654465545667608997654057888404897379999845774211123455
Q gi|254780168|r 153 SNIRHYIDTQP-IT-FSGDVVLRCLIPQNNAPEFIDFQSVNIFFGPDSHLVTYPLREDNTINMVFVSSKHTLKDISFLKR 230 (380)
Q Consensus 153 S~vR~~l~~~~-~~-~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (380)
T Consensus 162 S~vR~~~~~~~~~~~~y~~~~l~~~~~~~----~~~~~~~~~~~~~~~~~~~~p~~~-~~~~~~~~~~~~~~~~~~~~~- 235 (387)
T COG0654 162 SAVRRAAGIAEFSGRDYGQTALVANVEPE----EPHEGRAGERFTHAGPFALLPLPD-NRSSVVWSLPPGPAEDLQGLS- 235 (387)
T ss_pred HHHHHHCCCCCCCCCCCCEEEEEEEECCC----CCCCCCEEEEECCCCCEEEEECCC-CCEEEEEECCCCHHHHHCCCC-
T ss_conf 69997469876557755506999970377----888871689923897679987488-966899991386145402378-
Q ss_pred CCCCHHHHHHHHHHCCCCC--CEEEECCCCCCCCCCCCCCCCCCCCCCCEEECHHHCCCCCCCHHHHHCCCHHHHHHHHH
Q ss_conf 3222389898632128022--20110023321012334654210146871121111124483033420130367999999
Q gi|254780168|r 231 SEIHKEWFVKHLTNWHQEI--IQLILQINDTHLYPLFECECKHWHNKKNAVLIGDAAHTLLPFAAQGANMAIEDAYALSY 308 (380)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~--~~~i~~~~~~~~~~l~~~~~~~~~~~~rv~LiGDAAH~~~P~~GqG~n~al~Da~~La~ 308 (380)
T Consensus 236 ----~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~pl~~~~a~~~-~~~Rv~LiGDAAH~~~P~~gQG~nlg~~Da~~La~ 310 (387)
T COG0654 236 ----DEEFLRELQRRLGERDPLGRVTLVSSRSAFPLSLRVAERY-RRGRVVLIGDAAHAMHPLAGQGANLALEDAAALAE 310 (387)
T ss_pred ----HHHHHHHHHHHCCCCCCCCEEEECCCCEECCCCCCEECCE-ECCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf ----6889999998649743356045535320122124120113-64888999556676898610457677989999999
Q ss_pred HHCCCC---H-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH-HHHHHHHHHHHHCCCHHHH
Q ss_conf 852489---8-9999999998679999999999998898367898-9999999998515333777
Q gi|254780168|r 309 LLGKKT---I-PAAISAYQKVRAVRVKRIRYRTKLNQLLFHMHRP-ASLFRNAGLRLGIHKPLHK 368 (380)
Q Consensus 309 ~L~~~~---~-~~~l~~Y~~~R~~~~~~i~~~s~~~~~~~~~~~~-~~~~r~~~l~~~~~~~~~~ 368 (380)
T Consensus 311 ~L~~~~~~~~~~~~L~~Y~~~R~~~~~~~~~~s~~~~~~~~~~~~~~~~~r~~~l~~~~~~~~~~ 375 (387)
T COG0654 311 ALAAAPRPGADAAALAAYEARRRPRAEAIQKLSRALGRLFSADGPFARFLRNLGLRLLDRLPPLR 375 (387)
T ss_pred HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHH
T ss_conf 99975416851899999999978899999999999886434476177787888987402150147