HHsearch alignment for GI: 254780168 and conserved domain: PRK04176
>PRK04176 ribulose-1,5-biphosphate synthetase; Provisional.
Probab=98.80 E-value=4.1e-08 Score=74.14 Aligned_cols=125 Identities=22% Similarity=0.258 Sum_probs=72.4
Q ss_pred CEECCHHHHHHHHHHHHHCCCEEEEEECCCCCCCC--CCE-----EEECHHHHHHHHHCCCHHHHHHCCCCCCCEEEEEC
Q ss_conf 38775389999999999779859999568765557--713-----66788899999988994789862688430699978
Q gi|254780168|r 1 MIIGAGISGLTLAASLGHRGIQSCVLEKKDQLSDS--GFG-----IQISPNASRILKRIGILDQLEDIWIEPEDFVFRSG 73 (380)
Q Consensus 1 iIvGaG~aGl~~A~~L~~~G~~v~i~Er~~~~~~~--g~g-----i~l~p~~~~~L~~lGi~~~~~~~~~~~~~~~~~~~ 73 (380)
T Consensus 29 vIVGaGpsGLtAAy~LAk~g~Kv~i~E~~ls~GGG~WgGGmlf~~iVv~~~a~~iLde~gi---------~y~~~----- 94 (257)
T PRK04176 29 AIVGAGPSGLTAAYYLAKAGLKVAVFERKLSFGGGIWGGGMLFNKIVVQEEADEILDEFGI---------RYKEV----- 94 (257)
T ss_pred EEECCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHCCHHHHCCHHHHHHHHCCC---------CCEEC-----
T ss_conf 9988882799999999868965999971346888631300013345400537999998499---------73335-----
Q ss_pred CCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHCCCEEEEEEECCCCCCCC---C----------------C
Q ss_conf 85443334554323444478247862000134788997320687256421012344321---1----------------2
Q gi|254780168|r 74 STLKELSRFSCKNYSRNNWGGIYGVVKRHTLQKILLNHIQTQPLARLHLSTHITHPDCT---Q----------------I 134 (380)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~~~~~~~~~~v~~~~~~---~----------------~ 134 (380)
T Consensus 95 -------------------~~g~~v~d~~~~~s~L~~~a~~-aGakifn~~~VEDli~r~~~rV~GvV~NWt~V~~~glh 154 (257)
T PRK04176 95 -------------------EDGLYVADSVEAAAKLAAGAID-AGAKIFNGVSVEDVIIREDGRVAGVVINWTPVEMAGLH 154 (257)
T ss_pred -------------------CCCEEEECHHHHHHHHHHHHHH-CCCEEEECCEEEEEEEECCCCEEEEEECCHHHHHHCCC
T ss_conf -------------------8963995089999999999974-79889823044215661288178999625775640355
Q ss_pred CCCCCEEEEEEEEECCCCCCCHHHC
Q ss_conf 3453103568997436766312112
Q gi|254780168|r 135 SKINNQKPDLLVGADGLNSNIRHYI 159 (380)
Q Consensus 135 ~~~~~~~adlvIgADG~~S~vR~~l 159 (380)
T Consensus 155 vDP~~i~ak~VvdaTGHda~v~~~~ 179 (257)
T PRK04176 155 VDPLTIEAKAVVDATGHDAEVVSVL 179 (257)
T ss_pred CCCCEECCCEEEECCCCCHHHHHHH
T ss_conf 5852011368998889860899999