HHsearch alignment for GI: 254780168 and conserved domain: TIGR00031
>TIGR00031 UDP-GALP_mutase UDP-galactopyranose mutase; InterPro: IPR004379 UDP-galactopyranose mutase (5.4.99.9 from EC) is involved in the conversion of UDP-GALP into UDP-GALF through a 2-keto intermediate, and contains FAD as a cofactor. The gene is known as glf, ceoA, and rfbD. It is known experimentally in Escherichia coli, Mycobacterium tuberculosis, and Klebsiella pneumoniae.; GO: 0008767 UDP-galactopyranose mutase activity, 0009103 lipopolysaccharide biosynthetic process.
Probab=97.85 E-value=1.9e-05 Score=55.86 Aligned_cols=52 Identities=33% Similarity=0.613 Sum_probs=39.4
Q ss_pred CEECCHHHHHHHHH-HHHHCCCEEEEEECCCCCC-------CCCCEEE--------ECHHHHHHHHHC
Q ss_conf 38775389999999-9997798599995687655-------5771366--------788899999988
Q gi|254780168|r 1 MIIGAGISGLTLAA-SLGHRGIQSCVLEKKDQLS-------DSGFGIQ--------ISPNASRILKRI 52 (380)
Q Consensus 1 iIvGaG~aGl~~A~-~L~~~G~~v~i~Er~~~~~-------~~g~gi~--------l~p~~~~~L~~l 52 (380)
T Consensus 5 iivGaGl~G~V~A~r~l~~lgk~VLvvEkR~hiGGNcYd~~D~~Tgil~H~YGpHIfHTd~~~v~~y~ 72 (390)
T TIGR00031 5 IIVGAGLSGIVLANRILAQLGKRVLVVEKRNHIGGNCYDEVDENTGILFHQYGPHIFHTDNQEVFDYI 72 (390)
T ss_pred EEECCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCEEEEECCCEEEECCCCHHHHHH
T ss_conf 99866367799999999970998899973066587344422488743677418803543853143223