HHsearch alignment for GI: 254780168 and conserved domain: TIGR02032
>TIGR02032 GG-red-SF geranylgeranyl reductase family; InterPro: IPR011777 This entry includes geranylgeranyl reductases involved in chlorophyll and bacteriochlorophyll biosynthesis as well as other related enzymes which may also act on geranylgeranyl groups or related substrates..
Probab=99.95 E-value=1.5e-26 Score=200.54 Aligned_cols=296 Identities=20% Similarity=0.198 Sum_probs=179.7
Q ss_pred CEECCHHHHHHHHHHHHHCCCEEEEEECCCCCCC--CCCEEEECHHHHHHHHHCCCHH--------HHHHCCCC--CCCE
Q ss_conf 3877538999999999977985999956876555--7713667888999999889947--------89862688--4306
Q gi|254780168|r 1 MIIGAGISGLTLAASLGHRGIQSCVLEKKDQLSD--SGFGIQISPNASRILKRIGILD--------QLEDIWIE--PEDF 68 (380)
Q Consensus 1 iIvGaG~aGl~~A~~L~~~G~~v~i~Er~~~~~~--~g~gi~l~p~~~~~L~~lGi~~--------~~~~~~~~--~~~~ 68 (380)
T Consensus 4 vvvGaGPaG~~aA~~~A~~G~~Vllle~~~~~r~P~k~CGg~~~~~~~~~~~~~~~d~~~L~~~P~~~~~~~~~~~~~~~ 83 (343)
T TIGR02032 4 VVVGAGPAGSSAAYRLAKKGLRVLLLEKKSFPRYPGKPCGGALSPRVLEELVLPGPDEYALKDIPKELIVNEVRTLFNGA 83 (343)
T ss_pred EEECCCHHHHHHHHHHHHCCCEEEEEEEHHHCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHEECCC
T ss_conf 99827746899999999569738898504507988600577667001311367888861301477434542001100143
Q ss_pred EEEECCCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHCCCEEEEEEECCCC---CCCCC--CCC-----CC
Q ss_conf 999788544333455432344447824786200013478899732068725642101234---43211--234-----53
Q gi|254780168|r 69 VFRSGSTLKELSRFSCKNYSRNNWGGIYGVVKRHTLQKILLNHIQTQPLARLHLSTHITH---PDCTQ--ISK-----IN 138 (380)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~~~~~~~~~~v~~---~~~~~--~~~-----~~ 138 (380)
T Consensus 84 ~~~~~~~~~-~-~~~~~--~~~-~~~~~~v~~R~~fD~~L~~~A~~~G-~~~~~~~~~~~~~~~~~~~~~~~~~dd~~~~ 157 (343)
T TIGR02032 84 RIISPNGDK-V-EIPIE--ELA-FTEEAYVIDRDAFDEFLAERAQEAG-AELRLGTTVLDVEIEDKVVVEVRGGDDESKG 157 (343)
T ss_pred EEEECCCCE-E-EECCH--HHC-CCCEEEEEECHHHHHHHHHHHHHCC-CEEEECCEEEEEEECCCEEEEEECCCCCCCC
T ss_conf 388078632-2-10222--112-4743789852674189999997578-0675263761127618368997268675660
Q ss_pred CEEEEEEEEECCCCCCCHH-HCC----CCCC-CC-CCCEEEEEECCCCCCCCCCCCCCEEEEE----C---CCCEEEEEE
Q ss_conf 1035689974367663121-128----5334-43-1101578603654465545667608997----6---540578884
Q gi|254780168|r 139 NQKPDLLVGADGLNSNIRH-YID----TQPI-TF-SGDVVLRCLIPQNNAPEFIDFQSVNIFF----G---PDSHLVTYP 204 (380)
Q Consensus 139 ~~~adlvIgADG~~S~vR~-~l~----~~~~-~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~----~---~~~~~~~~p 204 (380)
T Consensus 158 ~~~a~~vigADG~~S~~~~~~lg~~~~~~~~~~~~~~~~a~~~~~~~~-~~~~~~~D~v~v~~~~~~~qrv~ggY~W~FP 236 (343)
T TIGR02032 158 EVTAKIVIGADGARSIVAKKKLGSSATLRENKEKRELGVALRAEVEMP-VEEEVDEDFVEVYIDRGLSQRVPGGYGWVFP 236 (343)
T ss_pred EEECCEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHEEEEEEEEECCC-CCCCCCCCEEEEEECCCEEEECCCCEEEEEC
T ss_conf 462558997168878432124787787777754120245546773067-6762357458999788013323787068854
Q ss_pred ECCCCEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCC---CCCCE-EEECCCCCCCCC---CCCCCCCCCCCCCC
Q ss_conf 048973799998457742111234553222389898632128---02220-110023321012---33465421014687
Q gi|254780168|r 205 LREDNTINMVFVSSKHTLKDISFLKRSEIHKEWFVKHLTNWH---QEIIQ-LILQINDTHLYP---LFECECKHWHNKKN 277 (380)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-~i~~~~~~~~~~---l~~~~~~~~~~~~r 277 (380)
T Consensus 237 ~G~-~~~nvG~g~~~~~~~~----~~~~~~~~~l~~f~~~~~~~~~~l~~~D~~-~~~~~~~~~WliP~~~~~~~~~~~~ 310 (343)
T TIGR02032 237 KGD-GTANVGVGSLPETDAA----EEGEDLKKYLKDFLAARPVAKEDLKNEDAV-EVEVIGAPKWLIPIRRPDEKLVRGN 310 (343)
T ss_pred CCC-CEEEEEEEECCCCCCC----CCCCCHHHHHHHHHHHCCCCHHHHHCCCCC-CCCCCCCCEEEEECCCCCCCCCCCC
T ss_conf 888-6899998753651123----355667899999999648861365304770-0000133134541486322113488
Q ss_pred EEECHHHCCCCCCCHHHHHCCCHHHHHHHHHH
Q ss_conf 11211111244830334201303679999998
Q gi|254780168|r 278 AVLIGDAAHTLLPFAAQGANMAIEDAYALSYL 309 (380)
Q Consensus 278 v~LiGDAAH~~~P~~GqG~n~al~Da~~La~~ 309 (380)
T Consensus 311 ~ll~GDAAg~V~P~~GgGI~yA~~~G~~Aa~~ 342 (343)
T TIGR02032 311 VLLVGDAAGFVKPLTGGGIYYAMRAGRVAAEV 342 (343)
T ss_pred EEEEECCCCCCCCCCCCCHHHHHHHHHHHHCC
T ss_conf 89993376722675567178999999986215