HHsearch alignment for GI: 254780168 and conserved domain: pfam03486
>pfam03486 HI0933_like HI0933-like protein.
Probab=98.66 E-value=6.9e-08 Score=72.60 Aligned_cols=132 Identities=23% Similarity=0.297 Sum_probs=75.0
Q ss_pred CEECCHHHHHHHHHHHHHCCCEEEEEECCCCCCCC----CCE-EEECHH--HHHH--------------HHHCCCHHH--
Q ss_conf 38775389999999999779859999568765557----713-667888--9999--------------998899478--
Q gi|254780168|r 1 MIIGAGISGLTLAASLGHRGIQSCVLEKKDQLSDS----GFG-IQISPN--ASRI--------------LKRIGILDQ-- 57 (380)
Q Consensus 1 iIvGaG~aGl~~A~~L~~~G~~v~i~Er~~~~~~~----g~g-i~l~p~--~~~~--------------L~~lGi~~~-- 57 (380)
T Consensus 4 ~VIGgGaaGl~aAi~aa~~g~~V~ilEk~~~~GkKll~tG~GRCN~TN~~~~~~~~~~~~~~~~fl~~~l~~F~~~d~~~ 83 (405)
T pfam03486 4 IVIGGGAAGLMAAISAAKRGRRVLLIEKGKKLGRKILISGGGRCNVTNSVEPDNFLSRYPGNPHFLKSALSRFTPWDFIA 83 (405)
T ss_pred EEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCEEEECCCCCCEECCCCCHHHHHHHCCCCHHHHHHHHHHCCHHHHHH
T ss_conf 99996699999999998689959999589987501588268961407899979998625775799999998489999999
Q ss_pred -HHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHCCCEEEEEEECCCCCC----C-
Q ss_conf -9862688430699978854433345543234444782478620001347889973206872564210123443----2-
Q gi|254780168|r 58 -LEDIWIEPEDFVFRSGSTLKELSRFSCKNYSRNNWGGIYGVVKRHTLQKILLNHIQTQPLARLHLSTHITHPD----C- 131 (380)
Q Consensus 58 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~~~~~~~~~~v~~~~----~- 131 (380)
T Consensus 84 ff~~~Gl-----~~~~e~~Grv---fP~-------------s~~A~~Vl~~L~~~l~~~g-V~i~~~~~V~~I~~~~~~~ 141 (405)
T pfam03486 84 WFEELGV-----PLKEEDHGRL---FPV-------------SDKASDIVDALLNELKELG-VKIRTRTRVLSVEKDDDGR 141 (405)
T ss_pred HHHHCCC-----EEEECCCCEE---ECC-------------CCCHHHHHHHHHHHHHHCC-CEEEECCEEEEEEECCCCE
T ss_conf 9997799-----0597789979---789-------------8986999999999999779-7899588878999759945
Q ss_pred -CCCCCCCCEEEEEEEEECCCCCC
Q ss_conf -11234531035689974367663
Q gi|254780168|r 132 -TQISKINNQKPDLLVGADGLNSN 154 (380)
Q Consensus 132 -~~~~~~~~~~adlvIgADG~~S~ 154 (380)
T Consensus 142 ~~v~~~~~~~~a~~vIlAtGG~s~ 165 (405)
T pfam03486 142 FRVDTGGEELEADSLVLATGGLSW 165 (405)
T ss_pred EEEEECCCEEEECEEEEECCCCCC
T ss_conf 999948958972789990488665