HHsearch alignment for GI: 254780168 and conserved domain: pfam06039
>pfam06039 Mqo Malate:quinone oxidoreductase (Mqo). This family consists of several bacterial Malate:quinone oxidoreductase (Mqo) proteins (EC:1.1.99.16). Mqo takes part in the citric acid cycle. It oxidizes L-malate to oxaloacetate and donates electrons to ubiquinone-1 and other artificial acceptors or, via the electron transfer chain, to oxygen. NAD is not an acceptor and the natural direct acceptor for the enzyme is most likely a quinone. The enzyme is therefore called malate:quinone oxidoreductase, abbreviated to Mqo. Mqo is a peripheral membrane protein and can be released from the membrane by addition of chelators.
Probab=96.98 E-value=0.018 Score=35.49 Aligned_cols=161 Identities=20% Similarity=0.233 Sum_probs=81.6
Q ss_pred CEECCHHHHHHHHHHHHHC--CCEEEEEECCCCCCC--------CCCE---E---EECH----------HHHHHHHHCCC
Q ss_conf 3877538999999999977--985999956876555--------7713---6---6788----------89999998899
Q gi|254780168|r 1 MIIGAGISGLTLAASLGHR--GIQSCVLEKKDQLSD--------SGFG---I---QISP----------NASRILKRIGI 54 (380)
Q Consensus 1 iIvGaG~aGl~~A~~L~~~--G~~v~i~Er~~~~~~--------~g~g---i---~l~p----------~~~~~L~~lGi 54 (380)
T Consensus 8 vlIGgGImsatL~~~L~~l~p~~~I~l~Erl~~~A~eSS~~wNNAgTgHaa~cElNYTpe~~dg~i~i~KA~~IneqFe~ 87 (489)
T pfam06039 8 VLIGAGIMSATLGVLLKELEPNWSIEVFERLDGVAQESSNPWNNAGTGHSALCELNYTPEGADGSIDISKAVKINEQFQI 87 (489)
T ss_pred EEECCHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 99996288999999999759987489998147525550788665521000213414887656884427999999999999
Q ss_pred ----HHHHHHCC---------CCCCCEEEEECCCCCC--------CCC---CCCCCCCC----------------CCCCC
Q ss_conf ----47898626---------8843069997885443--------334---55432344----------------44782
Q gi|254780168|r 55 ----LDQLEDIW---------IEPEDFVFRSGSTLKE--------LSR---FSCKNYSR----------------NNWGG 94 (380)
Q Consensus 55 ----~~~~~~~~---------~~~~~~~~~~~~~~~~--------~~~---~~~~~~~~----------------~~~~~ 94 (380)
T Consensus 88 Srqfws~lv~~g~l~~p~~fI~~~Phmsfv~Ge~~v~fLrkRye~lk~~~lF~~Me~seD~~~i~~w~PLv~~gR~~~e~ 167 (489)
T pfam06039 88 SRQFWAYLVKEGVLSNPKSFINPVPHMSFVWGEDNVAFLKKRYEALKQNPLFEGMEYSEDPEKIKEWVPLMMEGRDPDEP 167 (489)
T ss_pred HHHHHHHHHHCCCCCCHHHHCCCCCCEEEEECHHHHHHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCCCCCCCCC
T ss_conf 99999999875898985785056881589877698899999999850587867778447989998644800379797885
Q ss_pred E-------EEEEECCHHHHHHHHHHHHCCCEEEEEEECCCCCCC-------CCCC-----CCCCEEEEEEEEECCCCCC-
Q ss_conf 4-------786200013478899732068725642101234432-------1123-----4531035689974367663-
Q gi|254780168|r 95 I-------YGVVKRHTLQKILLNHIQTQPLARLHLSTHITHPDC-------TQIS-----KINNQKPDLLVGADGLNSN- 154 (380)
Q Consensus 95 ~-------~~~i~r~~l~~~L~~~~~~~~~~~~~~~~~v~~~~~-------~~~~-----~~~~~~adlvIgADG~~S~- 154 (380)
T Consensus 168 vAat~~~~GTdVnFGaLT~~l~~~l~~~~~~~l~~~~eV~~i~r~~dg~w~v~v~~~~~~~~~~~~A~fVfvgAGG~sL~ 247 (489)
T pfam06039 168 IAATRIDEGTDVNFGALTRQLFKYLQQKPNVELQYNHEVRDIKRNSDGTWTVTVKDLNTGDKRTIKAKFVFIGAGGGALP 247 (489)
T ss_pred EEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCEEEEEEECCCCCEEEEEEECCCCCEEEEEECEEEECCCHHHHH
T ss_conf 57994488740118999999999985189828992788534588899987999986578974899826799888757789
Q ss_pred CHHHCCC
Q ss_conf 1211285
Q gi|254780168|r 155 IRHYIDT 161 (380)
Q Consensus 155 vR~~l~~ 161 (380)
T Consensus 248 LlQksgi 254 (489)
T pfam06039 248 LLQKSGI 254 (489)
T ss_pred HHHHCCC
T ss_conf 9998198