RPSBLAST alignment for GI: 254780168 and conserved domain: TIGR01984

>gnl|CDD|162640 TIGR01984, UbiH, 2-polyprenyl-6-methoxyphenol 4-hydroxylase. This model represents the FAD-dependent monoxygenase responsible for the second hydroxylation step in the aerobic ubiquinone bioynthetic pathway. The scope of this model is limited to the proteobacteria. This family is closely related to the UbiF hydroxylase which catalyzes the final hydroxylation step. The enzyme has also been named VisB due to a mutant VISible light sensitive phenotype. Length = 382

 Score = 90.8 bits (226), Expect = 5e-19
 Identities = 90/378 (23%), Positives = 149/378 (39%), Gaps = 35/378 (9%)

Query: 2   IIGAGISGLTLAASLGHRG-IQSCVLEKKD----QLSDSGFGIQISPNASRILKRIGILD 56
           I+G G+ GL+LA +L   G I+  ++E       Q       + +S  + +IL+++G+  
Sbjct: 4   IVGGGLVGLSLALALSRLGKIKIALIEANSPSAAQPGFDARSLALSYGSKQILEKLGLWP 63

Query: 57  QLEDIWIEPEDFVFRSGSTLKELSRFSCKNYSRNNWGGIYGVVKRHTLQKILLNHIQTQP 116
           +L      P   +  S       +      +     G  Y VV+   L + LL+ +    
Sbjct: 64  KLAPF-ATPILDIHVSDQGHFGATHLRASEFGLPALG--Y-VVELADLGQALLSRLALLT 119

Query: 117 LARLH----LSTHITHPDCTQISKINNQ--KPDLLVGADGLNSNIRH--YIDTQPITFSG 168
             +L+        I + D  +++  N Q  +  LL+ ADG NS +R    I T+   +  
Sbjct: 120 NIQLYCPARYKEIIRNQDYVRVTLDNGQQLRAKLLIAADGANSKVRELLSIPTEEHDY-N 178

Query: 169 DVVLRCLIPQNNAPEFIDFQSVNIFFGPDSHLVTYPLREDNTINMVFVSSKHTLKDISFL 228
              L   I      +   F+     F P   L   PL+++   ++V+         I+ L
Sbjct: 179 QTALIANIRHEQPHQGCAFER----FTPHGPLALLPLKDNYRSSLVWCLPSKQADTIANL 234

Query: 229 KRSEIHKEWFVKHLTNWHQEIIQLILQINDTHLYPL-FECECKHWHNKKNAVLIGDAAHT 287
             +E     F+  L       +  I Q+ +   YPL       H H +   VLIG+AA T
Sbjct: 235 PDAE-----FLAELQQAFGWRLGKITQVGERKTYPLKLRIAETHVHPR--VVLIGNAAQT 287

Query: 288 LLPFAAQGANMAIEDAYALSYLLGKKTIP----AAISAYQKVRAV-RVKRIRYRTKLNQL 342
           L P A QG N+ + D   L+ +L    I     A +  Y + R   +   I     LN+L
Sbjct: 288 LHPIAGQGFNLGLRDVETLAEVLIDARIDLGTYALLQEYLRRRQFDQFITIGLTDGLNRL 347

Query: 343 LFHMHRPASLFRNAGLRL 360
             +        RN GL  
Sbjct: 348 FSNHIPLLRALRNLGLLA 365