Query gi|254780169|ref|YP_003064582.1| hypothetical protein CLIBASIA_00260 [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 54
No_of_seqs 1 out of 3
Neff 1.0
Searched_HMMs 13730
Date Mon May 23 08:37:12 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i 254780169.hhm -d /home/congqian_1/database/scop/scop70_1_75.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2aeba1 c.42.1.1 (A:5-313) Arg 14.5 45 0.0033 14.4 2.7 23 12-34 210-232 (309)
2 d1ev0a_ d.71.1.1 (A:) Cell div 10.1 63 0.0046 13.6 1.8 17 38-54 8-25 (58)
3 d1pq3a_ c.42.1.1 (A:) Arginase 9.4 68 0.0049 13.5 2.7 22 13-34 211-232 (306)
4 d1ma3a_ c.31.1.5 (A:) AF0112, 9.3 34 0.0025 15.0 0.2 14 25-38 96-109 (252)
5 d1yc5a1 c.31.1.5 (A:1-245) NAD 9.3 34 0.0025 15.0 0.2 12 26-37 95-106 (245)
6 d2nlva1 d.326.1.1 (A:1-111) Hy 8.1 77 0.0056 13.2 2.7 18 35-52 4-21 (111)
7 d3ecfa1 d.17.4.21 (A:2-129) Un 8.0 79 0.0057 13.2 2.7 14 36-49 3-16 (128)
8 d1m2ka_ c.31.1.5 (A:) AF1676, 7.9 56 0.0041 13.9 0.8 12 26-37 95-106 (249)
9 d2nvma1 d.326.1.1 (A:2-118) Xi 7.7 81 0.0059 13.1 3.0 18 35-52 3-20 (117)
10 d1q1aa_ c.31.1.5 (A:) Hst2 {Ba 6.5 56 0.0041 13.9 0.2 12 26-37 108-119 (289)
No 1
>d2aeba1 c.42.1.1 (A:5-313) Arginase {Human (Homo sapiens) [TaxId: 9606]}
Probab=14.50 E-value=45 Score=14.38 Aligned_cols=23 Identities=43% Similarity=0.764 Sum_probs=16.1
Q ss_pred HHHHHHCCCCCCEEEEEEEHHHH
Q ss_conf 02777402334703778515479
Q gi|254780169|r 12 ENKKVFKGFKAQPLFLSFNIDGL 34 (54)
Q Consensus 12 enkkvfkgfkaqplflsfnidgl 34 (54)
+......+.+..|+++||.+|.+
T Consensus 210 ~~l~~l~~~~~~~vyls~DiDvl 232 (309)
T d2aeba1 210 ETLSYLLGRKKRPIHLSFDVDGL 232 (309)
T ss_dssp HHHHHHHSSSCCCEEEEEEGGGB
T ss_pred HHHHHHHCCCCCCEEEEEECCCC
T ss_conf 99999853689837999761104
No 2
>d1ev0a_ d.71.1.1 (A:) Cell division protein MinE topological specificity domain {Escherichia coli [TaxId: 562]}
Probab=10.06 E-value=63 Score=13.64 Aligned_cols=17 Identities=41% Similarity=0.833 Sum_probs=11.4
Q ss_pred HHHHH-HHHHHHHHHHCC
Q ss_conf 99999-999999997509
Q gi|254780169|r 38 YLEII-QQLLSVIASYVE 54 (54)
Q Consensus 38 yleii-qqllsviasyve 54 (54)
||... +.+|.||+-||.
T Consensus 8 yLp~Lq~eil~VI~KyV~ 25 (58)
T d1ev0a_ 8 YLPQLRKDILEVICKYVQ 25 (58)
T ss_dssp SHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHHHEE
T ss_conf 189999999999987475
No 3
>d1pq3a_ c.42.1.1 (A:) Arginase {Human (Homo sapiens), isoform II, mitochondrial [TaxId: 9606]}
Probab=9.44 E-value=68 Score=13.49 Aligned_cols=22 Identities=32% Similarity=0.661 Sum_probs=15.4
Q ss_pred HHHHHCCCCCCEEEEEEEHHHH
Q ss_conf 2777402334703778515479
Q gi|254780169|r 13 NKKVFKGFKAQPLFLSFNIDGL 34 (54)
Q Consensus 13 nkkvfkgfkaqplflsfnidgl 34 (54)
-......-+..|+++||.+|.+
T Consensus 211 ~~~~~~~~~~~~iyvs~DiDvl 232 (306)
T d1pq3a_ 211 TFDLLIGKRQRPIHLSFDIDAF 232 (306)
T ss_dssp HHHHHHSSSCCCEEEEEEGGGB
T ss_pred HHHHHHCCCCCCEEEEEEECCC
T ss_conf 7777631578847999861422
No 4
>d1ma3a_ c.31.1.5 (A:) AF0112, Sir2 homolog (Sir2-AF2) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=9.31 E-value=34 Score=15.02 Aligned_cols=14 Identities=29% Similarity=0.375 Sum_probs=10.0
Q ss_pred EEEEEEHHHHHHHH
Q ss_conf 37785154799999
Q gi|254780169|r 25 LFLSFNIDGLFEKY 38 (54)
Q Consensus 25 lflsfnidglfeky 38 (54)
....-||||||+|.
T Consensus 96 ~viTqNiDgL~~ka 109 (252)
T d1ma3a_ 96 AVITQNIDMLHQRA 109 (252)
T ss_dssp EEEESCCSCHHHHH
T ss_pred EEEECCHHHHHHHC
T ss_conf 79742645899864
No 5
>d1yc5a1 c.31.1.5 (A:1-245) NAD-dependent deacetylase NpdA {Thermotoga maritima [TaxId: 2336]}
Probab=9.30 E-value=34 Score=15.02 Aligned_cols=12 Identities=33% Similarity=0.601 Sum_probs=9.4
Q ss_pred EEEEEHHHHHHH
Q ss_conf 778515479999
Q gi|254780169|r 26 FLSFNIDGLFEK 37 (54)
Q Consensus 26 flsfnidglfek 37 (54)
..+-|||||+++
T Consensus 95 viTQNiDgLh~~ 106 (245)
T d1yc5a1 95 VITQNIDRLHQR 106 (245)
T ss_dssp EEECCCSCHHHH
T ss_pred EEECCCCHHHHH
T ss_conf 863146568887
No 6
>d2nlva1 d.326.1.1 (A:1-111) Hypothetical protein Ava3825 {Anabaena variabilis [TaxId: 1172]}
Probab=8.11 E-value=77 Score=13.19 Aligned_cols=18 Identities=39% Similarity=0.563 Sum_probs=14.9
Q ss_pred HHHHHHHHHHHHHHHHHH
Q ss_conf 999999999999999975
Q gi|254780169|r 35 FEKYLEIIQQLLSVIASY 52 (54)
Q Consensus 35 fekyleiiqqllsviasy 52 (54)
.++|-.|||++|.--|++
T Consensus 4 l~~Yr~iI~~iL~~ya~~ 21 (111)
T d2nlva1 4 LVKYQELVKKLLTNYASD 21 (111)
T ss_dssp HHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHCC
T ss_conf 789999999999999617
No 7
>d3ecfa1 d.17.4.21 (A:2-129) Uncharacterized protein Ava4193 {Anabaena variabilis [TaxId: 1172]}
Probab=7.97 E-value=79 Score=13.15 Aligned_cols=14 Identities=36% Similarity=0.619 Sum_probs=9.6
Q ss_pred HHHHHHHHHHHHHH
Q ss_conf 99999999999999
Q gi|254780169|r 36 EKYLEIIQQLLSVI 49 (54)
Q Consensus 36 ekyleiiqqllsvi 49 (54)
+||-|||.|.+...
T Consensus 3 ~kyheIi~qYf~aF 16 (128)
T d3ecfa1 3 EKYHEILKKYFLSF 16 (128)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHH
T ss_conf 06899999999872
No 8
>d1m2ka_ c.31.1.5 (A:) AF1676, Sir2 homolog (Sir2-AF1?) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=7.86 E-value=56 Score=13.90 Aligned_cols=12 Identities=33% Similarity=0.711 Sum_probs=8.4
Q ss_pred EEEEEHHHHHHH
Q ss_conf 778515479999
Q gi|254780169|r 26 FLSFNIDGLFEK 37 (54)
Q Consensus 26 flsfnidglfek 37 (54)
..+-|||||+++
T Consensus 95 iiTqNiDgL~~~ 106 (249)
T d1m2ka_ 95 LITQNVDDLHER 106 (249)
T ss_dssp EEECCCSCHHHH
T ss_pred EEEEEECCHHHH
T ss_conf 886440898886
No 9
>d2nvma1 d.326.1.1 (A:2-118) XisI {Anabaena variabilis [TaxId: 1172]}
Probab=7.67 E-value=81 Score=13.08 Aligned_cols=18 Identities=17% Similarity=0.333 Sum_probs=14.2
Q ss_pred HHHHHHHHHHHHHHHHHH
Q ss_conf 999999999999999975
Q gi|254780169|r 35 FEKYLEIIQQLLSVIASY 52 (54)
Q Consensus 35 fekyleiiqqllsviasy 52 (54)
.++|-.|||++|+--|.+
T Consensus 3 L~~YR~iI~~iL~~Ya~~ 20 (117)
T d2nvma1 3 LTHYRHTIQEIIKKYYDL 20 (117)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHC
T ss_conf 789999999999999852
No 10
>d1q1aa_ c.31.1.5 (A:) Hst2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=6.46 E-value=56 Score=13.91 Aligned_cols=12 Identities=33% Similarity=0.346 Sum_probs=8.6
Q ss_pred EEEEEHHHHHHH
Q ss_conf 778515479999
Q gi|254780169|r 26 FLSFNIDGLFEK 37 (54)
Q Consensus 26 flsfnidglfek 37 (54)
...-|||||+++
T Consensus 108 viTQNIDgLh~~ 119 (289)
T d1q1aa_ 108 VYTQNIDTLERQ 119 (289)
T ss_dssp EEECCSSCHHHH
T ss_pred EEEECCCCCHHC
T ss_conf 996346770111
Done!