HHsearch alignment for GI: 254780170 and conserved domain: COG0834
>COG0834 HisJ ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Amino acid transport and metabolism / Signal transduction mechanisms].
Probab=100.00 E-value=2.1e-33 Score=231.90 Aligned_cols=221 Identities=27% Similarity=0.352 Sum_probs=181.1
Q ss_pred HHHHHHHCCEEEEEEECC-CCCCEEECCC-CCEEEEHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHCCCEEEEEEC
Q ss_conf 689998579499987178-9883068898-98801509999999999679822025998143100267743962799812
Q gi|254780170|r 26 ILGDIKKRGFLKCGINTG-LVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRN 103 (342)
Q Consensus 26 tLd~Vk~rG~L~vGv~~~-~ppfs~~d~~-G~~~GfDVDl~raiAaal~gd~~kVe~v~~~~~~rf~aL~sG~vDil~~~ 103 (342)
T Consensus 26 ~~~~~~~~~~~~v~~~~~~~~p~~~~~~~~~~~~G~dvdl~~~ia~~l~~~~-~~~~~~~~~~~~~~~l~~g~~D~~~~~ 104 (275)
T COG0834 26 LLDKIKARGKLRVGTEATYAPPFEFLDAKGGKLVGFDVDLAKAIAKRLGGDK-KVEFVPVAWDGLIPALKAGKVDIIIAG 104 (275)
T ss_pred HHHHHHHCCEEEEEECCCCCCCCEEECCCCCEEEEEHHHHHHHHHHHHCCCC-CEEEEECCHHHHHHHHHCCCCCEEEEC
T ss_conf 7766644775999972688898410238887067652999999999846774-248850688776389877998889856
Q ss_pred CCCCCCCHHCCCCCCCCCCCCCCEEEEEECCCC--CCCHHHHCCCCEEEEECCCHHHHHHHHHHHCCCCCCEEEECCHHH
Q ss_conf 432532011027843532234402346302113--475364178620343134269999999986299850787479899
Q gi|254780170|r 104 TDWTLLREISLGLAFRPITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 (342)
Q Consensus 104 ~T~T~~Rd~~~~v~Fs~~~~~dgq~~lVrk~~~--i~s~~dL~G~~I~v~~GTT~e~~l~~~~~~~~~~~~~v~~~~~~~ 181 (342)
T Consensus 105 ~~~t~~r~--~~~~fs~py~~~~~~~~~~~~~~~~~~~~~DL~gk~v~v~~gt~--~~~~~~~~~~~~~~~~~~~~~~~~ 180 (275)
T COG0834 105 MTITPERK--KKVDFSDPYYYSGQVLLVKKDSDIGIKSLEDLKGKKVGVQLGTT--DEAEEKAKKPGPNAKIVAYDSNAE 180 (275)
T ss_pred CCCCHHHH--HCCCCCCCEEECCEEEEEECCCCCCCCCHHHHCCCEEEEECCCH--HHHHHHHHHCCCCCEEEECCCHHH
T ss_conf 73687775--20056777365465899976885455898895897699966845--888877640467744998188899
Q ss_pred HHHHHHCCCEEEEEECCHHHHHHHHHCCCCHHHCCCCCCCCC-CCEEEECCCCC-HHHHHHHHHHHHHHHHH
Q ss_conf 999987396029982504799999836780010025644423-71010002777-57999988774433112
Q gi|254780170|r 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-SPLAPAIIQGD-TEWYNIVSWTHYAMVTA 251 (342)
Q Consensus 182 a~~al~~Gr~DA~~~D~s~La~~~~~~~~p~~~~il~e~isk-EPlg~avr~gD-~~w~d~V~W~~~ali~A 251 (342)
T Consensus 181 ~~~al~~Gr~Da~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~n~~l~~l~~~ 252 (275)
T COG0834 181 ALLALKNGRADAVVSDSAVLAGLKLLKKNPGLYVLLVFPGLSVEYLGIALRKGDDPELLEAVNKALKELKAD 252 (275)
T ss_pred HHHHHHCCCCCEEEECHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHC
T ss_conf 999998499889970688876666530155653211455665432000124685599999999999999819