HHsearch alignment for GI: 254780170 and conserved domain: COG1638
>COG1638 DctP TRAP-type C4-dicarboxylate transport system, periplasmic component [Carbohydrate transport and metabolism].
Probab=98.05 E-value=7.2e-05 Score=51.15 Aligned_cols=146 Identities=23% Similarity=0.256 Sum_probs=97.0
Q ss_pred CCCCEEE-EHHHHHHHHHHHHCCCCCEEEEEEC----CCCCCHHHHHCCCEEEEEECCCCCCCCHHCCCCCCCCCCCC--
Q ss_conf 9898801-5099999999996798220259981----43100267743962799812432532011027843532234--
Q gi|254780170|r 52 ANGDWKG-FDVDFCRALSSAIFDDPSKIQYLPL----NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF-- 124 (342)
Q Consensus 52 ~~G~~~G-fDVDl~raiAaal~gd~~kVe~v~~----~~~~rf~aL~sG~vDil~~~~T~T~~Rd~~~~v~Fs~~~~~-- 124 (342)
T Consensus 37 ~~~~p~~~~~~~fa~~v~ekt~G~-l~i~vfP~~qLG~~~~~ie~l~~G~id~~~~s~~~l~~~~P~~~-v~~lPflf~d 114 (332)
T COG1638 37 PEGHPKGKAAKKFAELVEEKTGGR-LKIEVFPNSQLGGEAEMIEQLRSGTLDIGVVSLGFLAGLVPEFG-VFDLPFLFRD 114 (332)
T ss_pred CCCCHHHHHHHHHHHHHHHHCCCE-EEEEECCCCCCCCHHHHHHHHHCCCCEEEECCCHHHCCCCCCCE-EECCCEEECC
T ss_conf 998807899999999999871993-89997667566876999999965973078506523211387501-2248755189
Q ss_pred --------------------------------CCEEEEEECCCCCCCHHHHCCCCEEEEECCCHHHHHHHHHHHCCCCCC
Q ss_conf --------------------------------402346302113475364178620343134269999999986299850
Q gi|254780170|r 125 --------------------------------DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 (342)
Q Consensus 125 --------------------------------dgq~~lVrk~~~i~s~~dL~G~~I~v~~GTT~e~~l~~~~~~~~~~~~ 172 (342)
T Consensus 115 ~~~~~~~~~~~~g~~l~~~~e~~g~~~l~~~~~G~R~~t~~k~PI~~peDlkGlkiRv~~s~~~----~~~~~a~GA~P~ 190 (332)
T COG1638 115 EEHARRVLDSEFGEELLKSLEAKGLKGLAFWENGFRQFTSNKRPIKTPEDLKGLKIRVPQSPLL----LAMFKALGANPT 190 (332)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEEEECCCCCCCHHHHCCCEEECCCCHHH----HHHHHHCCCCCC
T ss_conf 9999999713889999999997695799986275223334678778968967984635898899----999998699897
Q ss_pred EEEECCHHHHHHHHHCCCEEEEEECCHHHHHHHH
Q ss_conf 7874798999999873960299825047999998
Q gi|254780170|r 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206 (342)
Q Consensus 173 ~v~~~~~~~a~~al~~Gr~DA~~~D~s~La~~~~ 206 (342)
T Consensus 191 pm---~f~Evy~aLqtGvVDGqEnp~~~i~~~k~ 221 (332)
T COG1638 191 PM---PFAEVYTALQTGVVDGQENPLSNIYSAKL 221 (332)
T ss_pred CC---CHHHHHHHHHCCCCCCCCCCHHHHHCCCH
T ss_conf 78---88999999974970044176766610426