HHsearch alignment for GI: 254780170 and conserved domain: PRK00489

Probab=97.55  E-value=0.0011  Score=43.55  Aligned_cols=197  Identities=17%  Similarity=0.136  Sum_probs=118.3

Q ss_pred             EEEEEECCCCCCHHHHHCCCEEEEEECCCCCCCCHHC----CCCCCCCCCCCCCEEEEEECCCCCCCHHHHCCCCEEEEE
Q ss_conf             0259981431002677439627998124325320110----278435322344023463021134753641786203431
Q gi|254780170|r   77 KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS----LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQA  152 (342)
Q Consensus        77 kVe~v~~~~~~rf~aL~sG~vDil~~~~T~T~~Rd~~----~~v~Fs~~~~~dgq~~lVrk~~~i~s~~dL~G~~I~v~~  152 (342)
T Consensus        45 ~i~~~~~R~~DIp~yV~~G~~DlGI~G~D~l~E~~~~v~~~~~LgfG~c----rlvvAvP~~~~~~~~~dl~~~rIA---  117 (287)
T PRK00489         45 PIEVLFLRPDDIPGYVADGVVDLGITGEDLLEESDADVEELLDLGFGKC----RLVLAVPEDSDYTGPEDLAGKRIA---  117 (287)
T ss_pred             CEEEEEECHHHHHHHHHCCCCCEEEEEEEEHHHCCCCCEEEECCCCCCE----EEEEEECCCCCCCCHHHHCCCEEE---
T ss_conf             8799998879899999769977755133121206898169970688748----999995177888995782785897---


Q ss_pred             CCCHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCCHHHCCCCCCCCCCCEEEECCC
Q ss_conf             34269999999986299850787479899999987396029982504799999836780010025644423710100027
Q gi|254780170|r  153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ  232 (342)
Q Consensus       153 GTT~e~~l~~~~~~~~~~~~~v~~~~~~~a~~al~~Gr~DA~~~D~s~La~~~~~~~~p~~~~il~e~iskEPlg~avr~  232 (342)
T Consensus       118 -Tkyp~it~~yf~~~Gi~~~iv~l~GavE~a--P~lGlAD~IvDivsTG~TL~~-----NgLk~ie~Il~S~A~LI~n~~  189 (287)
T PRK00489        118 -TSYPNLTRRYLAEKGINARVVELSGAVEVA--PRLGLADAIVDLVSTGATLRA-----NGLKEVEVILRSEAVLIANKA  189 (287)
T ss_pred             -ECHHHHHHHHHHHCCCCEEEEECCCCEECC--CCCCCCCEEEEEECCCHHHHH-----CCCEEEEEEEECEEEEEEECC
T ss_conf             -300669999999869937999776723046--666810089997167487998-----799883577502359998077


Q ss_pred             -CCHH---HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHH-CCCCCCCCHHHCCCCHHH
Q ss_conf             -7757---99998877443311212330152089886226717788762-358876503337998679
Q gi|254780170|r  233 -GDTE---WYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFL-GIDKSSNIGEALGLTKDW  295 (342)
Q Consensus       233 -gD~~---w~d~V~W~~~ali~Aee~git~~nv~~~~~~s~~p~i~r~l-g~~~~~~~g~~lgl~~~~  295 (342)
T Consensus       190 ~~~~~k~~~i~~l~~ri~gvl~A~~~~~i~~Nvp~----~~l~~v~~~lPg~~--~PTi~pl~-~~~~  250 (287)
T PRK00489        190 WWDPEKREKIDKLLTRIQGVLRARESKYLMMNAPK----EKLDAVTALLPGLE--SPTVSPLA-DEDW  250 (287)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHCEEEEEEECCH----HHHHHHHHHCCCCC--CCCCCCCC-CCCE
T ss_conf             69867999999999999999977318999997877----77999998678888--98157047-9997