HHsearch alignment for GI: 254780170 and conserved domain: PRK01066
>PRK01066 porphobilinogen deaminase; Provisional.
Probab=93.42 E-value=0.68 Score=25.96 Aligned_cols=141 Identities=16% Similarity=0.083 Sum_probs=79.1
Q ss_pred CHHHHHCCCEEEEEECCCCCCCCHHCCCCCCCCCCC-CCCEEEEEECCCCCCCHHHH-CCCCEEEEECCCHHHHHHHHHH
Q ss_conf 026774396279981243253201102784353223-44023463021134753641-7862034313426999999998
Q gi|254780170|r 88 RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY-FDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFK 165 (342)
Q Consensus 88 rf~aL~sG~vDil~~~~T~T~~Rd~~~~v~Fs~~~~-~dgq~~lVrk~~~i~s~~dL-~G~~I~v~~GTT~e~~l~~~~~ 165 (342)
T Consensus 81 le~aLl~g~iDiAVHSlKDlP~---~~~l~i~av~~R~d~rDvLv~~--~~~~l~~lp~~a~I----GTSS~RR-~aql~ 150 (234)
T PRK01066 81 VDFLVLSGKCDLAIHSAKDLPE---PPKLTVVAITAGLDPSDLLVYA--EKYLLQPLPKRPRI----GSSSLRR-EELLK 150 (234)
T ss_pred HHHHHHCCCCCEEEEECCCCCC---CCCCEEEEEECCCCHHHHHHCC--CCCCCCCCCCCCEE----ECCCHHH-HHHHH
T ss_conf 9999976987789871578899---9997689996578988887604--67641228866877----3166619-99999
Q ss_pred HCCCCCCEEEECCH-HHHHHHHHCCCEEEEEECCHHHHH-HHHHCCCCHHHCCCCCCC--CCCCEEEECCCCCHHHHHHH
Q ss_conf 62998507874798-999999873960299825047999-998367800100256444--23710100027775799998
Q gi|254780170|r 166 AHNMKYHPIVFERV-EEIDAAYRAHRCDAYTGDISALYA-LKLTNDRPSEHVILPDII--SKSPLAPAIIQGDTEWYNIV 241 (342)
Q Consensus 166 ~~~~~~~~v~~~~~-~~a~~al~~Gr~DA~~~D~s~La~-~~~~~~~p~~~~il~e~i--skEPlg~avr~gD~~w~d~V 241 (342)
T Consensus 151 ~~~pdl~i~~iRGNI~TRl~Kl~~g~~DaiILA~---AGL~RLgl~~~~-~~~lp~~~~pgQGalaIe~R~dD~~~~~ll 226 (234)
T PRK01066 151 LLFPSGIILDIRGTIEERLKLLERGKYDAIVVAK---AAVLRLGLRLPY-TIELPPPYHPLQGRLAITAKKHIAKWKTLF 226 (234)
T ss_pred HHCCCCCEEECCCCHHHHHHHHCCCCCCEEEHHH---HHHHHCCCCCCC-EEECCCCCCCCCCCEEEEECCCCHHHHHHH
T ss_conf 8789997896408999999986178989533898---999875897754-585589887886828899807979999999
Q ss_pred H
Q ss_conf 8
Q gi|254780170|r 242 S 242 (342)
Q Consensus 242 ~ 242 (342)
T Consensus 227 ~ 227 (234)
T PRK01066 227 L 227 (234)
T ss_pred H
T ss_conf 9