HHsearch alignment for GI: 254780170 and conserved domain: PRK10682

>PRK10682 putrescine transporter subunit: periplasmic-binding component of ABC superfamily; Provisional.
Probab=93.62  E-value=0.63  Score=26.18  Aligned_cols=232  Identities=9%  Similarity=0.004  Sum_probs=117.2

Q ss_pred             HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCEEEEEEECCCCCCEEECCCCCEEEEHHHHHHHHHHHHCCCCCEEEEE
Q ss_conf             13899999999999984012442168999857949998717898830688989880150999999999967982202599
Q gi|254780170|r    2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL   81 (342)
Q Consensus         2 ~K~~l~~~l~l~~~~~~~~aa~a~tLd~Vk~rG~L~vGv~~~~ppfs~~d~~G~~~GfDVDl~raiAaal~gd~~kVe~v   81 (342)
T Consensus         5 ~~~~~~~l~~~~~~~~~~~~~aa~-------~~~Lnv~nW~~Yi--------------~p~~i~~FeketG---ikV~~~   60 (370)
T PRK10682          5 NKKWLSGLVAGALMAVSVGTLAAE-------QKTLHIYNWSDYI--------------APDTVANFEKETG---IKVVYD   60 (370)
T ss_pred             HHHHHHHHHHHHHHHHHCCHHHHC-------CCEEEEECCCCCC--------------CHHHHHHHHHHHC---CEEEEE
T ss_conf             788999999999999852056642-------7979998167657--------------9779999999979---889999


Q ss_pred             ECCCCCC-HHHHHCCC--EEEEEECCCCCCCCH------------------------------HCCCCCCCCCCCCCCEE
Q ss_conf             8143100-26774396--279981243253201------------------------------10278435322344023
Q gi|254780170|r   82 PLNAKER-FLALQSKQ--IDILSRNTDWTLLRE------------------------------ISLGLAFRPITYFDGQG  128 (342)
Q Consensus        82 ~~~~~~r-f~aL~sG~--vDil~~~~T~T~~Rd------------------------------~~~~v~Fs~~~~~dgq~  128 (342)
T Consensus        61 ~~~snee~~akl~ag~~gyDvv~ps~~~-v~~~~~~gll~pLD~sklpN~~ni~p~~~~~~~~~dpg~~YsVPy~wGt~G  139 (370)
T PRK10682         61 VFDSNEVLEGKLMAGSTGFDLVVPSASF-LERQLTAGVFQPLDKSKLPNWKNLDPELLKLVAKHDPDNKYAMPYMWATTG  139 (370)
T ss_pred             ECCCHHHHHHHHHCCCCCCCEEEECHHH-HHHHHHCCCCCCCCHHHCCCHHHCCHHHHHHHHCCCCCCEEEEEEEECCEE
T ss_conf             5499899999996699999889977799-999997698464770008674442999884100369997599888842259


Q ss_pred             EEEECC---------CCCCCHHHHC-----CC----CEEEE-----------------ECCCHHHHH----HHHHHHCCC
Q ss_conf             463021---------1347536417-----86----20343-----------------134269999----999986299
Q gi|254780170|r  129 FIMHKK---------KGISSVSQLS-----GA----SICVQ-----------------AGTTTELTL----ADYFKAHNM  169 (342)
Q Consensus       129 ~lVrk~---------~~i~s~~dL~-----G~----~I~v~-----------------~GTT~e~~l----~~~~~~~~~  169 (342)
T Consensus       140 I~Yn~d~v~~~~g~~~p~~sW~~l~~P~~~~k~k~~~v~~ld~~~~~~~~aL~~lG~~~n~~~~~d~~~aa~~~L~~~kp  219 (370)
T PRK10682        140 IGYNVDKVKAVLGEDAPVDSWDLVLKPENLEKLKSCGVSFLDAPEEIFATVLNYLGKDPNSTKADDYTGPATDLLLKLRP  219 (370)
T ss_pred             EEEECCCCCCCCCCCCCCCHHHHHHCHHHHHHCCCCCEEEECCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCH
T ss_conf             99976544223467888462998649275653035855897688899999999769998999999999999999997122


Q ss_pred             CCCEEEECCHHHHHHHHHCCCEEEEEECCH-HH-HHHHHHC-CCC--HHHCCCCC-CCCCCCEEEECCCCCHHHHH---H
Q ss_conf             850787479899999987396029982504-79-9999836-780--01002564-44237101000277757999---9
Q gi|254780170|r  170 KYHPIVFERVEEIDAAYRAHRCDAYTGDIS-AL-YALKLTN-DRP--SEHVILPD-IISKSPLAPAIIQGDTEWYN---I  240 (342)
Q Consensus       170 ~~~~v~~~~~~~a~~al~~Gr~DA~~~D~s-~L-a~~~~~~-~~p--~~~~il~e-~iskEPlg~avr~gD~~w~d---~  240 (342)
T Consensus       220 ~--v~~~~s-~~~~~~l~~Gei~~a~~wsGd~~~~~~~~~~~~~~~~i~yv-~PkEG~~~w~D~~~Ipk~A~n~~~A~~F  295 (370)
T PRK10682        220 N--IRYFHS-SQYINDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFS-IPKEGAMAFFDVFAMPADAKNKDEAYQF  295 (370)
T ss_pred             H--CCEECC-CHHHHHHHCCCEEEEEEECHHHHHHHHHHHHCCCCCEEEEE-ECCCCCEEEEEEEEEECCCCCHHHHHHH
T ss_conf             2--441037-28899985486799997408999999999863578706998-1588745888788886899996999999


Q ss_pred             HHHHHHH---HHHHHHHHCCHHHHH
Q ss_conf             8877443---311212330152089
Q gi|254780170|r  241 VSWTHYA---MVTAEELGITQKNIN  262 (342)
Q Consensus       241 V~W~~~a---li~Aee~git~~nv~  262 (342)
T Consensus       296 Inf~l~Pe~aa~~~~~~~y~~~n~~  320 (370)
T PRK10682        296 LNYLLRPDVIAHISDHVFYANANKA  320 (370)
T ss_pred             HHHHCCHHHHHHHHHHHCCCCHHHH
T ss_conf             9985097999999986478875389