HHsearch alignment for GI: 254780170 and conserved domain: PRK11151
>PRK11151 DNA-binding transcriptional regulator OxyR; Provisional.
Probab=91.64 E-value=1.2 Score=24.51 Aligned_cols=179 Identities=10% Similarity=0.044 Sum_probs=105.1
Q ss_pred CCEEEEEEECCCCCCEEECCCCCEEEEHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHCCCEEEEEECCCCCCCCHH
Q ss_conf 79499987178988306889898801509999999999679822025998143100267743962799812432532011
Q gi|254780170|r 33 RGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 (342)
Q Consensus 33 rG~L~vGv~~~~ppfs~~d~~G~~~GfDVDl~raiAaal~gd~~kVe~v~~~~~~rf~aL~sG~vDil~~~~T~T~~Rd~ 112 (342)
T Consensus 90 ~G~lrig~~~~~~~~-----------llp~~l~~f~~~-~-P~v~i~l~~~~~~~l~~~l~~g~~D~~i~~~~--~~--- 151 (305)
T PRK11151 90 SGPLHIGLIPTVGPY-----------LLPHIIPMLHQT-F-PKLEMYLHEAQTHQLLAQLDSGKLDCAILALV--KE--- 151 (305)
T ss_pred CCEEEEEEHHHHHHH-----------CCCHHHHHHHHC-C-CCCEEEEEECCCHHHHHHHHCCCCCEEEEECC--CC---
T ss_conf 641431102223332-----------382779998623-8-98379999887577787865788537998458--89---
Q ss_pred CCCCCCCCCCCCCCEEEEEECCCC-----CCCHHHHCCCCEEE-EECCCHHHHHHHHHHHCCCCCCE-EEECCHHHHHHH
Q ss_conf 027843532234402346302113-----47536417862034-31342699999999862998507-874798999999
Q gi|254780170|r 113 SLGLAFRPITYFDGQGFIMHKKKG-----ISSVSQLSGASICV-QAGTTTELTLADYFKAHNMKYHP-IVFERVEEIDAA 185 (342)
Q Consensus 113 ~~~v~Fs~~~~~dgq~~lVrk~~~-----i~s~~dL~G~~I~v-~~GTT~e~~l~~~~~~~~~~~~~-v~~~~~~~a~~a 185 (342)
T Consensus 152 ~~~~~~~-~l~~e~l~lv~~~~hpla~~~~i~l~~L~~~~~i~~~~~~~~r~~~~~~~~~~g~~~~~~~~~~~~~~i~~l 230 (305)
T PRK11151 152 SEAFIEV-PLFDEPMLLAVYEDHPWANRDRVPMSDLAGEKLLMLEDGHCLRDQAMGFCFEAGADEDTHFRATSLETLRNM 230 (305)
T ss_pred CCCCEEE-EECCCCEEEEEECCCCCCCCCCCCHHHHCCCCEEEECCCCCHHHHHHHHHHHCCCCCCEEEEEECHHHHHHH
T ss_conf 9872687-620462799995898433699989999769988996899859999999999779998738999447999999
Q ss_pred HHCCCEEEEEECCHHHHHHHHHCCCCHHHCCCC--CCCCCCCEEEECCCCCH
Q ss_conf 873960299825047999998367800100256--44423710100027775
Q gi|254780170|r 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILP--DIISKSPLAPAIIQGDT 235 (342)
Q Consensus 186 l~~Gr~DA~~~D~s~La~~~~~~~~p~~~~il~--e~iskEPlg~avr~gD~ 235 (342)
T Consensus 231 V~~G~Gv~ilp~~---~v~~~-~~-~~~l~~~pl~~~~~~r~i~lv~r~~~~ 277 (305)
T PRK11151 231 VAAGSGITLLPAL---AVPNE-RK-RDGVCYLPCIKPEPRRTIGLVYRPGSP 277 (305)
T ss_pred HHHCCCEEECCHH---HHHHH-CC-CCCEEEEECCCCCCEEEEEEEEECCCC
T ss_conf 9929968983599---98622-12-698899988899973699999989098