HHsearch alignment for GI: 254780170 and conserved domain: PRK11151

>PRK11151 DNA-binding transcriptional regulator OxyR; Provisional.
Probab=91.64  E-value=1.2  Score=24.51  Aligned_cols=179  Identities=10%  Similarity=0.044  Sum_probs=105.1

Q ss_pred             CCEEEEEEECCCCCCEEECCCCCEEEEHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHCCCEEEEEECCCCCCCCHH
Q ss_conf             79499987178988306889898801509999999999679822025998143100267743962799812432532011
Q gi|254780170|r   33 RGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI  112 (342)
Q Consensus        33 rG~L~vGv~~~~ppfs~~d~~G~~~GfDVDl~raiAaal~gd~~kVe~v~~~~~~rf~aL~sG~vDil~~~~T~T~~Rd~  112 (342)
T Consensus        90 ~G~lrig~~~~~~~~-----------llp~~l~~f~~~-~-P~v~i~l~~~~~~~l~~~l~~g~~D~~i~~~~--~~---  151 (305)
T PRK11151         90 SGPLHIGLIPTVGPY-----------LLPHIIPMLHQT-F-PKLEMYLHEAQTHQLLAQLDSGKLDCAILALV--KE---  151 (305)
T ss_pred             CCEEEEEEHHHHHHH-----------CCCHHHHHHHHC-C-CCCEEEEEECCCHHHHHHHHCCCCCEEEEECC--CC---
T ss_conf             641431102223332-----------382779998623-8-98379999887577787865788537998458--89---


Q ss_pred             CCCCCCCCCCCCCCEEEEEECCCC-----CCCHHHHCCCCEEE-EECCCHHHHHHHHHHHCCCCCCE-EEECCHHHHHHH
Q ss_conf             027843532234402346302113-----47536417862034-31342699999999862998507-874798999999
Q gi|254780170|r  113 SLGLAFRPITYFDGQGFIMHKKKG-----ISSVSQLSGASICV-QAGTTTELTLADYFKAHNMKYHP-IVFERVEEIDAA  185 (342)
Q Consensus       113 ~~~v~Fs~~~~~dgq~~lVrk~~~-----i~s~~dL~G~~I~v-~~GTT~e~~l~~~~~~~~~~~~~-v~~~~~~~a~~a  185 (342)
T Consensus       152 ~~~~~~~-~l~~e~l~lv~~~~hpla~~~~i~l~~L~~~~~i~~~~~~~~r~~~~~~~~~~g~~~~~~~~~~~~~~i~~l  230 (305)
T PRK11151        152 SEAFIEV-PLFDEPMLLAVYEDHPWANRDRVPMSDLAGEKLLMLEDGHCLRDQAMGFCFEAGADEDTHFRATSLETLRNM  230 (305)
T ss_pred             CCCCEEE-EECCCCEEEEEECCCCCCCCCCCCHHHHCCCCEEEECCCCCHHHHHHHHHHHCCCCCCEEEEEECHHHHHHH
T ss_conf             9872687-620462799995898433699989999769988996899859999999999779998738999447999999


Q ss_pred             HHCCCEEEEEECCHHHHHHHHHCCCCHHHCCCC--CCCCCCCEEEECCCCCH
Q ss_conf             873960299825047999998367800100256--44423710100027775
Q gi|254780170|r  186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILP--DIISKSPLAPAIIQGDT  235 (342)
Q Consensus       186 l~~Gr~DA~~~D~s~La~~~~~~~~p~~~~il~--e~iskEPlg~avr~gD~  235 (342)
T Consensus       231 V~~G~Gv~ilp~~---~v~~~-~~-~~~l~~~pl~~~~~~r~i~lv~r~~~~  277 (305)
T PRK11151        231 VAAGSGITLLPAL---AVPNE-RK-RDGVCYLPCIKPEPRRTIGLVYRPGSP  277 (305)
T ss_pred             HHHCCCEEECCHH---HHHHH-CC-CCCEEEEECCCCCCEEEEEEEEECCCC
T ss_conf             9929968983599---98622-12-698899988899973699999989098