HHsearch alignment for GI: 254780170 and conserved domain: PRK12684
>PRK12684 transcriptional regulator CysB-like protein; Reviewed.
Probab=96.35 E-value=0.096 Score=31.35 Aligned_cols=181 Identities=10% Similarity=0.032 Sum_probs=108.2
Q ss_pred HCCEEEEEEECCCCCCEEECCCCCEEEEHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHCCCEEEEEECCCCCCCCH
Q ss_conf 57949998717898830688989880150999999999967982202599814310026774396279981243253201
Q gi|254780170|r 32 KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 (342)
Q Consensus 32 ~rG~L~vGv~~~~ppfs~~d~~G~~~GfDVDl~raiAaal~gd~~kVe~v~~~~~~rf~aL~sG~vDil~~~~T~T~~Rd 111 (342)
T Consensus 91 ~~G~l~ig~~~s~~~~~l-----------p~~l~~f~~~~--P~v~l~l~~~~~~~~~~~l~~g~~Dl~i~~~~~~~~~- 156 (313)
T PRK12684 91 DQGNLTIATTHTQARYAL-----------PAAIAEFKKRY--PKVRLSILQGSPTQIAEMVIHDQADLAIATEAIADYK- 156 (313)
T ss_pred CCCEEECCHHHHHHHHCC-----------CHHHHHHHHHC--CCEEEEEEECCHHHHHHHHHCCCCCEEECCCCCCCCC-
T ss_conf 775141102455575159-----------49999998448--9808999717889999999779966550435777778-
Q ss_pred HCCCCCCCCCCCCCCEEEEEECCC-----CCCCHHHHCCCC-EEEEECCCHHHHHHHHHHHCCCCCCEE-EECCHHHHHH
Q ss_conf 102784353223440234630211-----347536417862-034313426999999998629985078-7479899999
Q gi|254780170|r 112 ISLGLAFRPITYFDGQGFIMHKKK-----GISSVSQLSGAS-ICVQAGTTTELTLADYFKAHNMKYHPI-VFERVEEIDA 184 (342)
Q Consensus 112 ~~~~v~Fs~~~~~dgq~~lVrk~~-----~i~s~~dL~G~~-I~v~~GTT~e~~l~~~~~~~~~~~~~v-~~~~~~~a~~ 184 (342)
T Consensus 157 ---~l~~-~~l~~~~~~~v~~~~hpla~~~~v~l~dL~~~p~I~~~~~~~~r~~i~~~~~~~g~~p~~~~e~~~~~~i~~ 232 (313)
T PRK12684 157 ---ELVS-LPCYQWNHAVVVPPDHPLLERKPLTLEDLAQYPLITYDDAFAGRSKINKAFALRGLKPDIVLEAIDADVIKT 232 (313)
T ss_pred ---CEEE-EEEEECCEEEEECCCCCCCCCCCCCHHHHCCCCEEECCCCCCHHHHHHHHHHHCCCCCCEEEEECCHHHHHH
T ss_conf ---7389-980322168995389854469999999985999896289985899999999977998747999997999999
Q ss_pred HHHCCCEEEEEECCHHHHHHHHHCCCCHHHCCCCC--CCCCCCEEEECCCCCHH
Q ss_conf 98739602998250479999983678001002564--44237101000277757
Q gi|254780170|r 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD--IISKSPLAPAIIQGDTE 236 (342)
Q Consensus 185 al~~Gr~DA~~~D~s~La~~~~~~~~p~~~~il~e--~iskEPlg~avr~gD~~ 236 (342)
T Consensus 233 ~V~~GlGi~ilP~---~a~~~--~~~-~~L~~lp~~~~~~~~~~~v~~~k~~~l 280 (313)
T PRK12684 233 YVELGLGVGIVAD---MAFDP--ERD-RNLRAIPAGHLFGSNVTRVALKQGAYL 280 (313)
T ss_pred HHHHCCCHHHHHH---HHHCH--HHC-CCEEEEECCCCCCCEEEEEEEECCCCC
T ss_conf 9995985725599---98467--638-987999784677660599999798866