>TIGR01098 3A0109s03R phosphonate ABC transporter, periplasmic phosphonate-binding protein; InterPro: IPR005770 Bacterial binding protein-dependent transport systems , are multicomponent systems typically composed of a periplasmic substrate-binding protein, one or two reciprocally homologous integral inner-membrane proteins and one or two peripheral membrane ATP-binding proteins that couple energy to the active transport system. The integral inner-membrane proteins translocate the substrate across the membrane. It has been shown , that most of these proteins contain a conserved region located about 80 to 100 residues from their C-terminal extremity. This region seems to be located in a cytoplasmic loop between two transmembrane domains. Apart from the conserved region, the sequence of these proteins is quite divergent, and they have a variable number of transmembrane helices. This is a family of periplasmic proteins which are part of the transport system for alkylphosphonate uptake. ; GO: 0015604 phosphonate transmembrane transporter activity, 0015716 phosphonate transport, 0030288 outer membrane-bounded periplasmic space.

Probab=99.20 E-value=4.4e-09 Score=77.86 Aligned_cols=233 Identities=15% Similarity=0.107 Sum_probs=141.7 Q ss_pred CHHHHHHHHHHHHHHHHHHC----------CCCCHH-------HHHHHHCCEEEEEEECCCCCCEEECCCCCEEEEHHHH Q ss_conf 91389999999999998401----------244216-------8999857949998717898830688989880150999 Q gi|254780170|r 1 MYKDFFVSILCLIILFFTSF----------STNASI-------LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 (342) Q Consensus 1 M~K~~l~~~l~l~~~~~~~~----------aa~a~t-------Ld~Vk~rG~L~vGv~~~~ppfs~~d~~G~~~GfDVDl 63 (342) T Consensus 1 mkr~~~~~~~~~~~~~~~~~~~S~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~g~~P~e~~-------~~~~~~~~pL 73 (299) T TIGR01098 1 MKRLLALLAALLVASLAAACGSSEIDNRDCAAKAADAADADADVEKSETPKELNFGILPGENA-------SNLARRWEPL 73 (299) T ss_pred CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCCHHHCCCCCCEEEEEEECCCCH-------HHHHHHHHHH T ss_conf 947889999999999998754200145435655100101562121036777268998448875-------5777766899 Q ss_pred HHHHHHHHCCCCCEEEEE-ECCCCCCHHHHHCCCEEEEEE-CCCCCCCCHHCCCCCCCCC----CCCCC-----EEEEEE Q ss_conf 999999967982202599-814310026774396279981-2432532011027843532----23440-----234630 Q gi|254780170|r 64 CRALSSAIFDDPSKIQYL-PLNAKERFLALQSKQIDILSR-NTDWTLLREISLGLAFRPI----TYFDG-----QGFIMH 132 (342) Q Consensus 64 ~raiAaal~gd~~kVe~v-~~~~~~rf~aL~sG~vDil~~-~~T~T~~Rd~~~~v~Fs~~----~~~dg-----q~~lVr 132 (342) T Consensus 74 ~~~Lek~Lg---~kV~~~~~~dY~a~IEamr~g~~D~a~~g~~sY~~A~~~~~~~~~a~~~~~~~~~~g~~~Y~S~~iv~ 150 (299) T TIGR01098 74 KDYLEKKLG---IKVELFVATDYSAVIEAMRFGRVDIAWFGPSSYVLAHRRANAEAFALTAIRYVSTDGSPGYYSVIIVK 150 (299) T ss_pred HHHHHHHCC---CCEEEEEECCCCCEEEEECCCCEEEEEECCCHHHEEEECCCCCHHHHHHHHHCCCCCCCCEEEEEEEC T ss_conf 998887558---86799861683103342326807898347851232200138701213443311688898348999983 Q ss_pred CCCCCCCHHH----HCCCCEEEE-ECCCHHHHHHH--HHHHCCC--C-------CCEEEECCHHHHHHHHHCCCEEEEEE Q ss_conf 2113475364----178620343-13426999999--9986299--8-------50787479899999987396029982 Q gi|254780170|r 133 KKKGISSVSQ----LSGASICVQ-AGTTTELTLAD--YFKAHNM--K-------YHPIVFERVEEIDAAYRAHRCDAYTG 196 (342) Q Consensus 133 k~~~i~s~~d----L~G~~I~v~-~GTT~e~~l~~--~~~~~~~--~-------~~~v~~~~~~~a~~al~~Gr~DA~~~ 196 (342) T Consensus 151 ~dS~i~~~~DlL~~LKGK~~af~Dp~STSG~l~P~~~l~~~~~~~~~~~d~~~F~~~~~~G~Hd~~~~~V~nG~vDaA~~ 230 (299) T TIGR01098 151 ADSPIKSLKDLLKKLKGKTFAFGDPASTSGYLVPRYQLLKEGGLDADKDDDKFFSEVVFSGSHDASILAVANGKVDAATN 230 (299) T ss_pred CCCCCCCHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCHHHHHHHHHHCCCCEEEE T ss_conf 89996338999975079759850688751247788998765078988853452332688431589999988088545765 Q ss_pred CCHHHHHHHHHC-CC-------------CHHHCCCCCC--CCCCCEEEECCCC-CH--HHHHHHHHHH Q ss_conf 504799999836-78-------------0010025644--4237101000277-75--7999988774 Q gi|254780170|r 197 DISALYALKLTN-DR-------------PSEHVILPDI--ISKSPLAPAIIQG-DT--EWYNIVSWTH 245 (342) Q Consensus 197 D~s~La~~~~~~-~~-------------p~~~~il~e~--iskEPlg~avr~g-D~--~w~d~V~W~~ 245 (342) T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~g~~D~~~~~~vI~~S~~IPnd--p~~~R~~L~~yP~~k~ki~~~F 296 (299) T TIGR01098 231 NSSAIERLKKRGPSDKFKKKVAKGATDLMKKVRVIWKSPLIPND--PIAVRSDLPPYPELKEKIRDAF 296 (299) T ss_pred CHHHHHHHHHCCCCCCCCEEECCCCCCCHHCEEEEEECCCCCCC--CEEEECCCCCCHHHHHHHHHHH T ss_conf 30446656530323565155204776713701787523787787--5465257896677999999998

HHsearch alignment for GI: 254780170 and conserved domain: TIGR01098